mRNA_P-wetherbeei_contig17046.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig17046.1.1
Unique NamemRNA_P-wetherbeei_contig17046.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig17046.1.1 vs. uniprot
Match: UPI001FE7100C (methyl-accepting chemotaxis protein n=2 Tax=Ideonella paludis TaxID=1233411 RepID=UPI001FE7100C)

HSP 1 Score: 258 bits (659), Expect = 6.880e-78
Identity = 156/306 (50.98%), Postives = 206/306 (67.32%), Query Frame = 1
Query:    1 MNTLLRRIPIRSRLLGSMLLVCSLLLGLGGWASLSYRTLQQQADSLLEAQSRANRDSSAVLAALERVQRHEQSVMLNGNNANEASEHKTRWDKEVAATAKLL----ASGAGDAERAKQLADGVAGLKAYAEAVGPVLQQVVDAKIDSTAAYAYASQALPELEKARSSFGKWLAQTESRVAAERESARSDGVMQSNLRLAAAVLVMGSFCGLMLLLSRSITLPLARASEQARRIAQGDLSARIADDGHDEVTAFVHALGEMQQALRKIVGEVRTGADNIHTASAEVASGNLDLSRRTEHAASNLQET 906
            M  LLR++ I+ RLLG+M L+  +L+ LG WA+L+Y+ +Q QAD +L+ Q    RDSS VLA+LER+ R EQ+V+L  NNA EA+E KT W K+V     LL    AS + D +R   +  G+A LKAYA  V PVLQQVVDAKID+ A YAY S+A P L++AR+S G W   T+  +   R   R  G MQSN R  +A+LVM     LM+ ++RS+T PL  A+ QA+R+A+GDL+A   D G DEV  F+ AL  M+ +LR +V +VR G+++IH AS EVASGNLDLS+RTE  ASNLQ T
Sbjct:    1 MIQLLRQLSIQRRLLGAMGLISLVLVSLGAWAALAYKEVQAQADQMLKWQMETQRDSSTVLASLERMARMEQAVLLTANNAVEAAEQKTAWGKQVKQANDLLEAAKASDSSDTQRNTHVTAGLAALKAYATEVEPVLQQVVDAKIDANAGYAYTSRAQPSLDQARTSLGAWATATQDSITQARAQQRERGQMQSNFRAGSALLVMAMAMWLMVNVARSVTRPLQEAASQAQRMAEGDLNAVQQDKGRDEVHDFMTALDHMRSSLRSVVAKVRDGSNSIHLASTEVASGNLDLSQRTEQTASNLQRT 306          
BLAST of mRNA_P-wetherbeei_contig17046.1.1 vs. uniprot
Match: A0A0U3LBE7_9BURK (Methyl-accepting chemotaxis sensory transducer n=2 Tax=Roseateles TaxID=93681 RepID=A0A0U3LBE7_9BURK)

HSP 1 Score: 256 bits (654), Expect = 7.720e-78
Identity = 148/289 (51.21%), Postives = 202/289 (69.90%), Query Frame = 1
Query:   13 LRRIPIRSRLLGSMLLVCSLLLGLGGWASLSYRTLQQQADSLLEAQSRANRDSSAVLAALERVQRHEQSVMLNGNNANEASEHKTRWDKEVAATAKLLASGAGDAERAKQLADGVAGLKAYAEAVGPVLQQVVDAKIDSTAAYAYASQALPELEKARSSFGKWLAQTESRVAAERESARSDGVMQSNLRLAAAVLVMGSFCGLMLLLSRSITLPLARASEQARRIAQGDLSARIADDGHDEVTAFVHALGEMQQALRKIVGEVRTGADNIHTASAEVASGNLDLSRRTE 879
            LR + IR RLLGS LL+C L++GLG W+++S   LQ ++  LL+ QS+  +D++ +LA+LER+QR EQSVMLNGNN NEA EH  +W K VA     L S     ER + LA  +AG +A+ + +  +LQQVVDAK+D +AA+AYA QA  +L+ AR+ F KW+  T++ V AERE+ ++   +QS +RL   V+++    GLML L RSI  PL RASE A+RIA+GDL+A I   G DEV AF+  L +MQ +LR+IVG+VR  A++I  AS EVA+GNLDLS+RTE
Sbjct:    4 LRNLSIRQRLLGSTLLLCLLIIGLGAWSAISLDHLQNRSSDLLDRQSQTAQDTARILASLERIQRLEQSVMLNGNNTNEAGEHHAQWKKTVADMRAQLKSVMTTPEREQALAPALAGFEAHVKPLADILQQVVDAKMDPSAAFAYAGQAQADLDTARTVFNKWVEDTQAAVIAEREADQASSSLQSKIRLGGLVVIIALVSGLMLALVRSILTPLGRASEVAKRIARGDLTADIVVQGRDEVAAFMQTLADMQMSLREIVGQVRQSAESIRIASDEVATGNLDLSQRTE 292          
BLAST of mRNA_P-wetherbeei_contig17046.1.1 vs. uniprot
Match: A0A8B7NFR9_HYAAZ (methyl-accepting chemotaxis citrate transducer-like n=2 Tax=cellular organisms TaxID=131567 RepID=A0A8B7NFR9_HYAAZ)

HSP 1 Score: 239 bits (611), Expect = 8.150e-71
Identity = 147/305 (48.20%), Postives = 201/305 (65.90%), Query Frame = 1
Query:    1 MNTLLRRIPIRSRLLGSMLLVCSLLLGLGGWASLSYRTLQQQADSLLEAQSRANRDSSAVLAALERVQRHEQSVMLNGNNANEASEHKTRWDKEVAATAKLLASGA-----GDAERAKQLADGVAGLKAYAEAVGPVLQQVVDAKIDSTAAYAYASQALPELEKARSSFGKWLAQTESRVAAERESARSDGVMQSNLRLAAAVLVMGSFCGLMLLLSRSITLPLARASEQARRIAQGDLSARIADDGHDEVTAFVHALGEMQQALRKIVGEVRTGADNIHTASAEVASGNLDLSRRTEHAASNLQ 900
            M  LLR++ I+ RLL +M L+  +L+ LG WA+++Y+ +Q QAD +L+ Q    RDS  VLA+LER+ R EQ+V+L  NNA EA+E K  W ++V  TAK L   A      D +R   + +G+  L+AYA  V PVLQQVVDAKID+ A YAY S+A P L++AR+S G W   T+  +   R   R  G +QSN+R  +A+ VM     LM+ ++RS+T PL  A+ QA+R+A+GDL+    D G DEV  F+ AL EM+ +LR +V +VR G+ +IH AS EVASGNLDLS+RTE  ASNLQ
Sbjct:    1 MTQLLRQLSIQKRLLAAMSLISLVLVILGAWAAVAYKEVQAQADHMLKWQMDTQRDSGTVLASLERMARMEQAVLLTANNAVEAAEQKAAWAQQVK-TAKALLEAAKLADSSDTQRNTHVTEGLTALQAYASEVEPVLQQVVDAKIDANAGYAYTSRAQPNLDQARTSLGAWATATQDSITQARTQQREHGQLQSNIRAGSALAVMVIAMWLMMKVARSVTHPLNEAARQAQRMAEGDLNPVEPDKGRDEVHEFMAALDEMRSSLRGVVAKVRDGSKSIHLASTEVASGNLDLSQRTEQTASNLQ 304          
BLAST of mRNA_P-wetherbeei_contig17046.1.1 vs. uniprot
Match: UPI0003B4D4ED (HAMP domain-containing protein n=1 Tax=Ideonella sp. B508-1 TaxID=137716 RepID=UPI0003B4D4ED)

HSP 1 Score: 218 bits (556), Expect = 4.630e-65
Identity = 140/300 (46.67%), Postives = 197/300 (65.67%), Query Frame = 1
Query:    1 MNTLLRRIPIRSRLLGSMLLVCSLLLGLGGWASLSYRTLQQQADSLLEAQSRANRDSSAVLAALERVQRHEQSVMLNGNNANEASEHKTRWDKEVAATAKLLASGAGDAERAKQLADGVAGLKAYAEAVGPVLQQVVDAKIDSTAAYAYASQALPELEKARSSFGKWLAQTESRVAAERESARSDGVMQSNLRLAAAVLVMGSFCGLMLLLSRSITLPLARASEQARRIAQGDLSARIADDGHDEVTAFVHALGEMQQALRKIVGEVRTGADNIHTASAEVASGNLDLSRRTEHAASNLQ 900
            MN LLR+  IR RL   +  +  L+L +  W+  + R++++Q D L+  Q ++   ++ VL ++ER+QR EQ+ MLNG+NA  A E   +W K VAA  + L   A DA     LA+G+ G +A+  A+  VLQQVVDAKID++AAYAYA QA  +L+ A+ +F  W  Q+ +   A R+ AR+   +Q    LA  V+V+G    +M+   RSI  PL +ASE ARRIA GDLS  +  +G DEV+AF+  L +MQQ+LR++VG+VR  AD+I TAS+EVA+GNLDLS+RTEH ASNLQ
Sbjct:    1 MNQLLRQFSIRLRLSAGLAALAFLMLVIVLWSVWTLRSVREQGDQLMAQQLQSLDTANGVLFSMERMQRLEQATMLNGSNAVTADEFFQQWKKTVAALRQDLKPMASDAT----LAEGIKGFEAHVTALQDVLQQVVDAKIDASAAYAYAGQAQGDLDTAQKAFDSWGQQSRATAEAARDEARTRTQVQMGASLALLVVVLGGVGVMMVFTLRSILGPLTQASEAARRIAAGDLSGELPREGRDEVSAFITCLADMQQSLRRLVGQVRHSADSILTASSEVANGNLDLSQRTEHTASNLQ 296          
BLAST of mRNA_P-wetherbeei_contig17046.1.1 vs. uniprot
Match: UPI001B367CF8 (methyl-accepting chemotaxis protein n=2 Tax=unclassified Ideonella TaxID=2634919 RepID=UPI001B367CF8)

HSP 1 Score: 215 bits (547), Expect = 1.690e-61
Identity = 140/302 (46.36%), Postives = 183/302 (60.60%), Query Frame = 1
Query:    1 MNTLLRRIPIRSRLLGSMLLVCSLLLGLGGWASLSYRTLQQQADSLLEAQSRANRDSSAVLAALERVQRHEQSVMLNGNNANEASEHKTRWDKEVAATAKLLASGAGDAERAKQLADGVAGLKAYAEAVGPVLQQVVDAKIDSTAAYAYASQALPELEKARSSFGKWLAQTESRVAAERESARSDGVMQSNLRLAAAVLVMGSFCGLMLLLSRSITLPLARASEQARRIAQGDLSARIADDGHDEVTAFVHALGEMQQALRKIVGEVRTGADNIHTASAEVASGNLDLSRRTEHAASNLQET 906
            M  LLRR+ IR RLLGS++L+   ++ LG WA+ S R  Q    +LL+ Q+      + +  ALE +QR EQ V+L GNNA EA E +  W K V  TA+   +     ERA  LA    GL+ Y + V  VLQQVVDAK+DS A YAYA +A   LE+AR +   W    ++ + A+   A +     S LRL A +L++  F GLM   +RSIT PL  A+  A  ++ GDL+ R+   G DEVT F+  L  MQ+ALR IV +VR  ADNI  ASAEVASGNLDLS+RTE AA +LQ+T
Sbjct:    1 MQELLRRLSIRQRLLGSIVLLAVAIIVLGLWAAWSLRQQQDHGAALLQRQAEFTAGDAGIRLALEHIQRLEQGVLLAGNNAVEAGETQAAWAKAVE-TARAALAKLAQGERAALLAPAREGLEVYTKEVRDVLQQVVDAKMDSAAGYAYAQRAAQSLEQARQAVQAWSQAEKTALEAQEAEAMTTAQRLSMLRLVAVLLLLAGFIGLMWATTRSITDPLGHATAAAAAVSDGDLTRRLDSRGSDEVTRFMQTLSSMQEALRAIVSQVRDSADNIRVASAEVASGNLDLSQRTERAAGDLQQT 301          
BLAST of mRNA_P-wetherbeei_contig17046.1.1 vs. uniprot
Match: A0A643FHK6_IDEDE (HAMP domain-containing protein n=1 Tax=Ideonella dechloratans TaxID=36863 RepID=A0A643FHK6_IDEDE)

HSP 1 Score: 210 bits (534), Expect = 2.390e-60
Identity = 128/270 (47.41%), Postives = 184/270 (68.15%), Query Frame = 1
Query:   91 WASLSYRTLQQQADSLLEAQSRANRDSSAVLAALERVQRHEQSVMLNGNNANEASEHKTRWDKEVAATAKLLASGAGDAERAKQLADGVAGLKAYAEAVGPVLQQVVDAKIDSTAAYAYASQALPELEKARSSFGKWLAQTESRVAAERESARSDGVMQSNLRLAAAVLVMGSFCGLMLLLSRSITLPLARASEQARRIAQGDLSARIADDGHDEVTAFVHALGEMQQALRKIVGEVRTGADNIHTASAEVASGNLDLSRRTEHAASNLQ 900
            W+  + R++++Q D L+  Q ++   ++ VL ++ER+QR EQ+ MLNG+N   A E   +W K VAA  K L   AG+A     LA+G+ G +A+  A+  VLQQVVDAKID++AAYAYA QA  +LE A+ +F  W+ Q+ +  AA R+ A++   ++    LA   +V+G    +M+L  RSI  PL++ASE ARRIA GDL   +  +G DEV+AF+ +L +MQQ+LR++VG+VR  AD+I TAS+EVA+GNLDLS+RTEH ASNLQ
Sbjct:    7 WSVWTVRSVREQGDQLMAQQLQSLDTANGVLFSMERMQRLEQATMLNGSNTVAADEFFQQWKKTVAALRKDLQPMAGEAS----LAEGIKGFEAHVTALQDVLQQVVDAKIDASAAYAYAGQAQGDLETAQKAFDGWVQQSRTTAAAARDEAKTRTQVEMGASLALLAVVLGVVGVMMVLTLRSIIGPLSQASEAARRIAAGDLGGELPREGRDEVSAFIASLADMQQSLRRLVGQVRHSADSILTASSEVANGNLDLSQRTEHTASNLQ 272          
BLAST of mRNA_P-wetherbeei_contig17046.1.1 vs. uniprot
Match: UPI001B359187 (methyl-accepting chemotaxis protein n=1 Tax=Ideonella sp. 4Y11 TaxID=2824119 RepID=UPI001B359187)

HSP 1 Score: 197 bits (501), Expect = 7.940e-55
Identity = 134/302 (44.37%), Postives = 179/302 (59.27%), Query Frame = 1
Query:    1 MNTLLRRIPIRSRLLGSMLLVCSLLLGLGGWASLSYRTLQQQADSLLEAQSRANRDSSAVLAALERVQRHEQSVMLNGNNANEASEHKTRWDKEVAA----TAKLLASGAGDAERAKQLADGVAGLKAYAEAVGPVLQQVVDAKIDSTAAYAYASQALPELEKARSSFGKWLAQTESRVAAERESARSDGVMQSNLRLAAAVLVMGSFCGLMLLLSRSITLPLARASEQARRIAQGDLSARIADDGHDEVTAFVHALGEMQQALRKIVGEVRTGADNIHTASAEVASGNLDLSRRTEHAASN 894
            M  LLRR+ IR RLLGSM L+   ++GLG W++ S R  Q  A  LL  Q+      + +   LER+QR EQ+V+L GNNA EA E KT W K +A      A L A+  G A +A +      GL  YA+ VG VLQQVVDA++D+ A +AY  ++   L+KAR +   W       + A +  A       S LR    ++++ SF  LM   +RSIT+PL +A+  A  +A GDLS R+   G DE+  F+H L +MQ ALR IV +VR  AD+I  AS+EVASGNLDLS+RTE AAS+
Sbjct:    1 MQALLRRLSIRLRLLGSMALLAVAVVGLGLWSAWSLRQQQDLAAELLHEQAAFAGTGAGLQLTLERIQRLEQAVLLTGNNAVEAGELKTAWSKTIAQGDHDLAALAAAPQGAALQAAR-----DGLSTYAKEVGDVLQQVVDARMDAAAGHAYTQRSAESLDKARQAVQSWSDARRGAIDARQAEAVVVAQRLSVLRTVVVLVLLASFSALMWAAARSITVPLDQATAAAAAVANGDLSQRLDSPGSDEIARFMHTLAQMQDALRGIVSQVRDSADSIRVASSEVASGNLDLSQRTEQAASD 297          
BLAST of mRNA_P-wetherbeei_contig17046.1.1 vs. uniprot
Match: A0A257CFB3_9BURK (Chemotaxis protein n=1 Tax=Burkholderiales bacterium PBB6 TaxID=2015568 RepID=A0A257CFB3_9BURK)

HSP 1 Score: 190 bits (483), Expect = 1.310e-52
Identity = 118/259 (45.56%), Postives = 163/259 (62.93%), Query Frame = 1
Query:    1 MNTLLRRIPIRSRLLGSMLLVCSLLLGLGGWASLSYRTLQQQADSLLEAQSRANRDSSAVLAALERVQRHEQSVMLNGNNANEASEHKTRWDKEVAATAKLLASGAGDAERAKQLADGVAGLKAYAEAVGPVLQQVVDAKIDSTAAYAYASQALPELEKARSSFGKWLAQTESRVAAERESARSDGVMQSNLRLAAAVLVMGSFCGLMLLLSRSITLPLARASEQARRIAQGDLSARIADDGHDEVTAFVHALGEMQQA 777
            MN+ LR   IR RLLGSML++  L++ LG WA++++++ Q + ++LL  Q+  + +SS + +ALERVQR EQSV+L  NNA EA +H   W KE      LL +   +  R   +A+G+AG   YA+ V PVLQQVVDAK+D++A +AYAS+  PELEK R+ F  WL  T   +AAE+  A+S    QS  RL A   ++ +F  L   + +SI  PL  AS  A RIA+GDLS  + + G DEV+ FV  L EMQ A
Sbjct:    1 MNSFLRNFSIRQRLLGSMLVLSILVIALGVWAAVAFKSSQARGEALLAKQTALSAESSELSSALERVQRLEQSVLLTANNAVEAGDHLAAWTKETTKLRALLQANLSEDVRQGVMAEGMAGFDTYAKEVAPVLQQVVDAKMDASAGFAYASRNWPELEKTRAGFATWLGNTRETMAAEQAEAKSHEAAQSLFRLIAVSTMLIAFSALNWAIVKSIARPLDDASAAAGRIAKGDLSEAVPNTGRDEVSRFVDRLNEMQSA 259          
BLAST of mRNA_P-wetherbeei_contig17046.1.1 vs. uniprot
Match: UPI00202372D7 (methyl-accepting chemotaxis protein n=1 Tax=Aquincola tertiaricarbonis TaxID=391953 RepID=UPI00202372D7)

HSP 1 Score: 149 bits (376), Expect = 6.000e-37
Identity = 120/333 (36.04%), Postives = 179/333 (53.75%), Query Frame = 1
Query:   16 RRIPIRSRLLGSMLLVCSLLLGLGGWASLSYRTLQQQADSLLEAQSRANRDSSAVLAALERVQRHEQSVMLNG-NNANEASEHKTRWDKEV----AATAKLLASGAGDAERAKQLADGVAGLKAYAEAVGPVLQQVVDAKIDSTAAYAYASQALPELEKARSSFGKWLAQTESRVAAERESARSDGVMQSNLRLAAAVLVMGSFCGLMLLLSRSITLPLARASEQARRIAQGDLSARIADDGHDEVTAFVHALGEMQQALRKIVGEVRTGADNIHTASAEVASGNLDLSRRTEHAASNLQETAASMEELTGMVRRSADSAAHANQMAGVATEV 999
            R + +R+R    M LV   L+ LG W+ L  RT    A  L +    A+     +  +L  ++R+E +++    +N+ E      +W K++     A A+L++   G+ + A+ +A     L  YA  + P+  Q+ +AK+D++A  AYA +A   LE  +++ G  L    +   + R     D    +  RLA  V  +     LM+   RS+  PL RA    RRIA GDL++ I   G DE    +  L  MQQAL ++VG+VR  + +I  AS EVASGNLDLS RTE AA +LQ TA++MEEL+  VR SA+SA  ANQ+AG A+ V
Sbjct:   28 RTLSVRTRFYLVMGLVSLSLVVLGAWSLLDSRTTNGPAARLFDQAMAASDQVGDLRESLSALRRYEAAMIATAVSNSTEVEPLHLQWKKQLERLKTAGAQLVSDNPGNPQLAELVATQNKLLGEYAATIEPIAVQLKEAKMDASAGLAYAQRANDTLEALQANTGALLKAQHAHADSLRAEMADDAATAAWARLALVVATLLVVLPLMVATLRSVCGPLDRAVLVTRRIADGDLTSHIDTRGSDEPARLLQGLAAMQQALGRVVGQVRASSASIEAASREVASGNLDLSHRTEQAAKHLQSTASAMEELSAKVRHSAESADTANQLAGSASAV 360          
BLAST of mRNA_P-wetherbeei_contig17046.1.1 vs. uniprot
Match: I0HRI5_RUBGI (Methyl-accepting chemotaxis protein n=3 Tax=Rubrivivax gelatinosus TaxID=28068 RepID=I0HRI5_RUBGI)

HSP 1 Score: 144 bits (364), Expect = 1.160e-35
Identity = 112/320 (35.00%), Postives = 166/320 (51.88%), Query Frame = 1
Query:   52 MLLVCSLLLGLGGWASLSYRTLQQQADSLLEAQSRANRDSSAVLAALERVQRHEQSVMLNGNNANEASEHKTRWDKEVAATAKLLASGAGDAERAKQLADG----------VAGLKAYAEAVGPVLQQVVDAKIDSTAAYAYASQALPELEKARSSFGKWLAQTESRVAAERESARSDGVMQSNLRLAAAVLVMGSFCGLMLLLSRSITLPLARASEQARRIAQGDLSARIADDGHDEVTAFVHALGEMQQALRKIVGEVRTGADNIHTASAEVASGNLDLSRRTEHAASNLQETAASMEELTGMVRRSADSAAHANQMA 981
            M ++ + LLGLG W  +  R + Q+  +L ++    +   + +  +L  ++R +   + +G+N  E       W  E     KL      DA+  K  +D           +A L+ Y   VGP+L ++  A +DS  A AYA  A   +   R++    L  ++SR A  R        + +NLRL   VL +      + L  RS+  PL  A   A RIA+GDL   +A +G DE  A + +L +MQ ALR++VG+VR  A++I TAS EVA+GN DLS+RTE  ASNLQ+TA+SME LT  VR     A  AN++A
Sbjct:    1 MAVLAAALLGLGAWGVVENRIVTQRTAALFDSAQEGSDAVARLRESLANLRRLQADAIASGSNPVEVERLVGLWKSEAERVKKL------DADLMKIDSDNTTIEALVKQQLAQLEQYTGIVGPLLDKLQSAVLDSAGALAYAESAEEHVVALRTTADAMLKASQSRQAQIRGELADASALAANLRLGLTVLAVAVLLPALWLTLRSVCEPLQDAVAAADRIARGDLGQDLATEGQDETAALLRSLQQMQLALRRLVGQVRESAESIQTASGEVAAGNADLSQRTEEQASNLQQTASSMEMLTDSVRHXXXXAQRANELA 314          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17046.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001FE7100C6.880e-7850.98methyl-accepting chemotaxis protein n=2 Tax=Ideone... [more]
A0A0U3LBE7_9BURK7.720e-7851.21Methyl-accepting chemotaxis sensory transducer n=2... [more]
A0A8B7NFR9_HYAAZ8.150e-7148.20methyl-accepting chemotaxis citrate transducer-lik... [more]
UPI0003B4D4ED4.630e-6546.67HAMP domain-containing protein n=1 Tax=Ideonella s... [more]
UPI001B367CF81.690e-6146.36methyl-accepting chemotaxis protein n=2 Tax=unclas... [more]
A0A643FHK6_IDEDE2.390e-6047.41HAMP domain-containing protein n=1 Tax=Ideonella d... [more]
UPI001B3591877.940e-5544.37methyl-accepting chemotaxis protein n=1 Tax=Ideone... [more]
A0A257CFB3_9BURK1.310e-5245.56Chemotaxis protein n=1 Tax=Burkholderiales bacteri... [more]
UPI00202372D76.000e-3736.04methyl-accepting chemotaxis protein n=1 Tax=Aquinc... [more]
I0HRI5_RUBGI1.160e-3535.00Methyl-accepting chemotaxis protein n=3 Tax=Rubriv... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig17046contigP-wetherbeei_contig17046:1..999 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog983917.RGE_22810
PFAMs4HB_MCP_1,HAMP,MCPsignal
Model size999
Max annot lvl28216|Betaproteobacteria
KEGG koko:K03406
KEGG Pathwayko02020,ko02030,map02020,map02030
Hectar predicted targeting categorysignal peptide
Exons1
Evalue1.9e-36
EggNOG OGsCOG0840@1|root,COG0840@2|Bacteria,1MU9B@1224|Proteobacteria,2VZ6J@28216|Betaproteobacteria
DescriptionChemotaxis sensory transducer
Cds size999
COG categoryNT
BRITEko00000,ko00001,ko02035
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186106.161904-CDS-P-wetherbeei_contig17046:0..9991683186106.161904-CDS-P-wetherbeei_contig17046:0..999Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig17046 1..999 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig17046.1.1prot_P-wetherbeei_contig17046.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig17046 1..999 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig17046.1.1

>prot_P-wetherbeei_contig17046.1.1 ID=prot_P-wetherbeei_contig17046.1.1|Name=mRNA_P-wetherbeei_contig17046.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=333bp
MNTLLRRIPIRSRLLGSMLLVCSLLLGLGGWASLSYRTLQQQADSLLEAQ
SRANRDSSAVLAALERVQRHEQSVMLNGNNANEASEHKTRWDKEVAATAK
LLASGAGDAERAKQLADGVAGLKAYAEAVGPVLQQVVDAKIDSTAAYAYA
SQALPELEKARSSFGKWLAQTESRVAAERESARSDGVMQSNLRLAAAVLV
MGSFCGLMLLLSRSITLPLARASEQARRIAQGDLSARIADDGHDEVTAFV
HALGEMQQALRKIVGEVRTGADNIHTASAEVASGNLDLSRRTEHAASNLQ
ETAASMEELTGMVRRSADSAAHANQMAGVATEV
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mRNA from alignment at P-wetherbeei_contig17046:1..999-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig17046.1.1 ID=mRNA_P-wetherbeei_contig17046.1.1|Name=mRNA_P-wetherbeei_contig17046.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=999bp|location=Sequence derived from alignment at P-wetherbeei_contig17046:1..999- (Phaeothamnion wetherbeei SAG_119_79)
ATGAACACGCTCCTGCGCCGCATCCCGATTCGATCCCGCCTGCTCGGCAG CATGCTGCTGGTCTGCTCCCTGCTGCTCGGCCTGGGCGGCTGGGCCAGCC TGAGCTACCGCACGCTGCAGCAGCAGGCCGACAGCCTGCTCGAGGCACAG TCGCGCGCCAACCGCGACAGCAGCGCAGTGCTCGCCGCACTGGAGCGCGT GCAGCGCCACGAACAATCGGTGATGCTGAACGGCAACAATGCCAACGAGG CCTCGGAGCACAAGACCCGCTGGGACAAGGAAGTGGCCGCCACCGCGAAG CTGCTGGCCAGCGGTGCCGGCGACGCCGAACGCGCCAAGCAGCTGGCCGA CGGCGTGGCCGGGCTGAAGGCCTACGCCGAAGCGGTCGGCCCGGTGCTGC AGCAGGTGGTCGACGCCAAGATCGACAGCACCGCCGCCTATGCCTACGCC AGCCAGGCGCTGCCGGAGCTGGAGAAGGCCCGCAGCTCCTTCGGCAAGTG GCTGGCCCAGACCGAATCCCGCGTGGCCGCCGAGCGCGAAAGCGCGCGCA GCGACGGGGTGATGCAGTCCAACCTGCGGCTGGCCGCTGCGGTGCTGGTG ATGGGCAGCTTCTGCGGCCTGATGCTGCTGCTCTCGCGCTCCATCACGCT GCCGCTGGCCCGCGCCAGCGAACAGGCCCGCCGCATCGCCCAGGGCGACC TGTCGGCCCGCATCGCCGACGACGGCCACGACGAGGTGACCGCCTTCGTG CACGCCCTCGGCGAGATGCAGCAGGCGCTGCGCAAGATCGTCGGCGAAGT GCGCACCGGCGCGGACAACATCCACACCGCCAGCGCCGAGGTGGCCTCCG GCAACCTCGACCTGAGCCGGCGCACCGAGCATGCCGCCAGCAACCTGCAG GAGACCGCCGCCTCGATGGAGGAGCTGACCGGCATGGTGCGGCGCAGCGC CGACTCGGCCGCGCACGCCAACCAGATGGCCGGCGTCGCCACCGAGGTG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig17046:1..999-

>mRNA_P-wetherbeei_contig17046.1.1 ID=mRNA_P-wetherbeei_contig17046.1.1|Name=mRNA_P-wetherbeei_contig17046.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=999bp|location=Sequence derived from alignment at P-wetherbeei_contig17046:1..999- (Phaeothamnion wetherbeei SAG_119_79)
ATGAACACGCTCCTGCGCCGCATCCCGATTCGATCCCGCCTGCTCGGCAG
CATGCTGCTGGTCTGCTCCCTGCTGCTCGGCCTGGGCGGCTGGGCCAGCC
TGAGCTACCGCACGCTGCAGCAGCAGGCCGACAGCCTGCTCGAGGCACAG
TCGCGCGCCAACCGCGACAGCAGCGCAGTGCTCGCCGCACTGGAGCGCGT
GCAGCGCCACGAACAATCGGTGATGCTGAACGGCAACAATGCCAACGAGG
CCTCGGAGCACAAGACCCGCTGGGACAAGGAAGTGGCCGCCACCGCGAAG
CTGCTGGCCAGCGGTGCCGGCGACGCCGAACGCGCCAAGCAGCTGGCCGA
CGGCGTGGCCGGGCTGAAGGCCTACGCCGAAGCGGTCGGCCCGGTGCTGC
AGCAGGTGGTCGACGCCAAGATCGACAGCACCGCCGCCTATGCCTACGCC
AGCCAGGCGCTGCCGGAGCTGGAGAAGGCCCGCAGCTCCTTCGGCAAGTG
GCTGGCCCAGACCGAATCCCGCGTGGCCGCCGAGCGCGAAAGCGCGCGCA
GCGACGGGGTGATGCAGTCCAACCTGCGGCTGGCCGCTGCGGTGCTGGTG
ATGGGCAGCTTCTGCGGCCTGATGCTGCTGCTCTCGCGCTCCATCACGCT
GCCGCTGGCCCGCGCCAGCGAACAGGCCCGCCGCATCGCCCAGGGCGACC
TGTCGGCCCGCATCGCCGACGACGGCCACGACGAGGTGACCGCCTTCGTG
CACGCCCTCGGCGAGATGCAGCAGGCGCTGCGCAAGATCGTCGGCGAAGT
GCGCACCGGCGCGGACAACATCCACACCGCCAGCGCCGAGGTGGCCTCCG
GCAACCTCGACCTGAGCCGGCGCACCGAGCATGCCGCCAGCAACCTGCAG
GAGACCGCCGCCTCGATGGAGGAGCTGACCGGCATGGTGCGGCGCAGCGC
CGACTCGGCCGCGCACGCCAACCAGATGGCCGGCGTCGCCACCGAGGTG
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