mRNA_P-wetherbeei_contig17044.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig17044.1.1 vs. uniprot
Match: UPI0019B72A8B (Uncharacterized protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=UPI0019B72A8B) HSP 1 Score: 159 bits (402), Expect = 1.760e-44 Identity = 105/259 (40.54%), Postives = 158/259 (61.00%), Query Frame = 1
Query: 7 MNKLPAFQTIKHALKAVFQFRNAGARIGLPWVLVLAGMSVIDRS-FSAAPDPANGTASMMFPGPMELVIAALSLVIFSSIAVNWHRYILLDEITASEKIFRLDRPVWDYVGRTLIIMLATLVPIFVLSFIFVTAL---PSLSPLLAVPF-FVAGIYIMRMSVALPALALERKDFGITAALQVTQGNNLQFAALLVLNGLILFATFLALGIVLSVVGSVNMAAAKILAVVLSIPVNLFLSLFSVSLLSSLYGFFVEQRKF 768
M KLP + + HALK+V +R AG RIG W+++L + V +R F + NGTA+ + + A +S + FSSIAV+WHR+IL DE+ + RLD V Y+G +L+ +LA VP+ +F TAL P + ++ +P AG +I +S+ LPA+AL+R DF AL+ +GN Q A + +LN +++F AL ++L V+ A A + ++LS+P+NLF +LFSVS+L+SLYGFFVE+R F
Sbjct: 1 MRKLPPLKAVSHALKSVISYRMAGIRIGALWMVILFAVDVAERLLFPSGAGAGNGTATSI-----RWLSAIVSFLAFSSIAVSWHRFILRDELPLAANSLRLDARVLRYLGNSLLALLAGGVPLV----LFATALAFLPRAAAIVLLPAALTAGAFISMLSLKLPAVALDRSDFSFGDALKSAEGNFWQIATVFLLNAMVIFLPLTALVLLLR---QVSPAVASVTGLILSVPLNLFFTLFSVSVLTSLYGFFVEKRDF 247
BLAST of mRNA_P-wetherbeei_contig17044.1.1 vs. uniprot
Match: A0A847ZV12_9HYPH (Uncharacterized protein n=1 Tax=Phyllobacteriaceae bacterium TaxID=1871068 RepID=A0A847ZV12_9HYPH) HSP 1 Score: 127 bits (320), Expect = 4.070e-32 Identity = 93/266 (34.96%), Postives = 144/266 (54.14%), Query Frame = 1
Query: 7 MNKLPAFQTIKHALKAVFQFRNAGARIGLPWVLVLAGMSVIDRSF----SAAPDPANGTASMMFPGPMELVIAALSLVIFSSIAVNWHRYILLDEITASEKIFRLDRPVWDYVGRTLIIMLAT---LVPIFVLSFIFVTALPSLSPLLAVPFFVAG-IYIM----RMSVALPALALERKDFGITAALQVTQGNNLQFAALLVLNGLILFATFLALGIVLSVVGSVNMAAAKILAVVLSIPVNLFLSLFSVSLLSSLYGFFVEQRKF 768
M KLP H L++ + PW+LV+ +++ + S +PD A+ A + LVI LS+ F+SIAV+WHRYILLDE+ R D VW Y G T++I LA L+P+ +L+ IF+ L + + AVP ++A +Y M R+SV LPA+ALER+D + A T+ N Q L +L L A + +G+V ++ + ++++ + I +N L++ V+LL+SLYGFF+EQR F
Sbjct: 1 MRKLPVGAAFGHVLQSTVNNLGFAWHLSWPWLLVILPLNLFAGIYGIGDSLSPDQASAGAVLT-----SLVIGLLSMFAFASIAVSWHRYILLDEVPKGWARLRADNTVWRYFGNTILIFLAIIAGLIPVAILAAIFLAVLGNFGAVFAVPLYLAAALYSMSAFYRLSVKLPAVALERQDIHMRDAWAATRDNTWQMIGLAMLFLLCAVALAIVIGLVSWLLAQSGASFLLLVSLAVQITLNWVLTIMGVTLLTSLYGFFIEQRDF 261
BLAST of mRNA_P-wetherbeei_contig17044.1.1 vs. uniprot
Match: UPI001908A839 (hypothetical protein n=1 Tax=Aestuariivirga sp. YIM B02566 TaxID=2800327 RepID=UPI001908A839) HSP 1 Score: 125 bits (313), Expect = 4.710e-31 Identity = 94/261 (36.02%), Postives = 140/261 (53.64%), Query Frame = 1
Query: 13 KLPAFQTIKHALKAVFQFRNAGARIGLPWVLVLAGMSVIDRSFSAAPDPANGTASMMFPGPMELVIAALSLVIFSSIAVNWHRYILLDEITASEKIFRLDRPVWDYVGRTLIIMLATLVPIFVLSFIF--VTALPSL--SPLLAVPFF-----VAGIYIMRMSVALPALALERKDFGITAALQVTQGNNLQFAALLVLNGLILFATFLALGIVLSVVGSVNMAAAKILAVVLSIPVNLFLSLFSVSLLSSLYGFFVEQRKF 768
KLP I HA+ +V RI PW +V+ +++I +A + T + ++ L F+SIAVNWHRYILLDE+ S IFRLD VW Y G ++I L +V F++ + AL SL SPL + F VAG +R+SV LPA+AL R DFG+ A VT+ +NL + + + L + L +G++ + + ++ A A +A VL N +++FS+++L+SLYGFF E R F
Sbjct: 4 KLPVGTCIGHAINSVRHNIVYAFRISWPWYVVVIPLTIIVSLVLSAAAGGDLTQNQGLAFLNNMISGLLLGFAFASIAVNWHRYILLDEVPDSRGIFRLDDKVWRYFGNIILIFLILVVAGFLVGIPLGIIAALTSLGASPLFPLLLFIIIVPVAGTIALRLSVKLPAIALGRTDFGLKNAFAVTRDSNLPIFLVALFEIVCLLGSLLLIGLLAAALNQLSPALAIAVAYVLHFAANWIITIFSITVLTSLYGFFAEGRDF 264
BLAST of mRNA_P-wetherbeei_contig17044.1.1 vs. uniprot
Match: UPI001907CE1F (hypothetical protein n=1 Tax=Aestuariivirga sp. YIM B02566 TaxID=2800327 RepID=UPI001907CE1F) HSP 1 Score: 124 bits (311), Expect = 1.040e-30 Identity = 90/264 (34.09%), Postives = 148/264 (56.06%), Query Frame = 1
Query: 13 KLPAFQTIKHALKAVFQFRNAGARIGLPWVLVLAGMSVIDRSFSAAPDPANGTASMMFPGPMELVIAALSLVIFSSIAVNWHRYILLDEITASEKIFRLDRPVWDYVGRTLIIMLATLVPIFVLSFIFVTALPSLSPLLAVPFFVAG--------IYIMRMSVALPALALERKDFGITAALQVTQGNNLQFAALLVLNGLILFAT---FLALGIVLSVVG-SVNMAAAKILAVVLSIPVNLFLSLFSVSLLSSLYGFFVEQRKF 768
+LPA + HA+K+V RI PW LVLA +++ +F++ F P+ +V+A ++++ F+SIAVNWHRYILLD++ ++FRLD W YVG +I L V +F++ + + L SLS ++ V + G I R+SV LPA+A+ R+DF ++ A T+ N L +++ L+L FLAL L+++G ++ + ++++ L L++F+V++L+SLYGFFVE R F
Sbjct: 11 QLPAGACVSHAIKSVRNNIGYAFRISWPWYLVLAALNIGTLAFASFALAGGIEVHPGFYVPIAIVVALVTILAFASIAVNWHRYILLDQVPVGAELFRLDGLTWRYVGNVWLIGLIVGV-VFMIGMLPLMLLGSLSEVIGVVAVIIGLAGFMFVVISTYRLSVKLPAIAIGRRDFSLSDAWAATRDNKLPIFLVILFQFLLLIGVALVFLALDFTLALIGPTITLVISQLIQAFL----GWLLAIFNVTILTSLYGFFVEGRDF 269
BLAST of mRNA_P-wetherbeei_contig17044.1.1 vs. uniprot
Match: UPI001906D150 (hypothetical protein n=1 Tax=Aestuariivirga sp. YIM B02566 TaxID=2800327 RepID=UPI001906D150) HSP 1 Score: 117 bits (294), Expect = 2.740e-28 Identity = 93/273 (34.07%), Postives = 144/273 (52.75%), Query Frame = 1
Query: 13 KLPAFQTIKHALKAVFQFRNAGARIGLPW--------VLVLAGMSVIDRSFSAAPDPANGTASMMFPGPMELVIAALSLVIFSSIAVNWHRYILLDEITASEKIFRLDRPVWDYVGRTLIIMLATLVPIFVLSFIFVTALPSL-------SPLLAVP------FFVAGIYIMRMSVALPALALERKDFGITAALQVTQGNNLQFAALLVLNGLILFATFLALGIVLSVVGSVNMAAAKILAVVLSIPVNLFLSLFSVSLLSSLYGFFVEQRKF 768
KLP I+HA+ +V + RI PW + V AG+ V+ A G S + G + LV A+S V F++IAVNWHRYILLDE+ IFRLD W Y+G L+I L +F++S + + L +L S ++AV F + I+ +R+SV LPA+AL R+DF + AL T+GN+L L++ + T + + + V G+++ + ++ + VN L++F +++L+SLYGFF E R F
Sbjct: 4 KLPVGTCIRHAVNSVRNNISYAFRISWPWYAAIAVLSIAVFAGLGVL---------AAGGVLSALHFGVVFLV--AISFVAFAAIAVNWHRYILLDEVPTGGSIFRLDGHTWRYLGNLLLIGLI----LFLISAVIMGPLIALAANLYSDSVIIAVVIVGLIFFMILAIFSVRLSVKLPAVALGRRDFTFSHALAATRGNSLPVLLLILFQVALALGTGMLMFFLEFVTGAIHPIFGFVTGLLAQLFVNWILTIFGITILTSLYGFFAEGRDF 261
BLAST of mRNA_P-wetherbeei_contig17044.1.1 vs. uniprot
Match: A0A6G6WP23_9HYPH (Uncharacterized protein n=1 Tax=Nordella sp. HKS 07 TaxID=2712222 RepID=A0A6G6WP23_9HYPH) HSP 1 Score: 114 bits (286), Expect = 4.180e-27 Identity = 91/266 (34.21%), Postives = 141/266 (53.01%), Query Frame = 1
Query: 13 KLPAFQTIKHALKAVFQFRNAGARIGLPWVLVLAGMSVIDRSFSAAPDPANGTASMMFPGPMELVIAALSLVIFSSIAVNWHRYILLDEITASEKIFRLDRPVWDYVGRTLIIMLATLVPIFVLSFIFVTALPSLSPLLAVPFFVAG--------IYIMRMSVALPALALERKDFGITAALQVTQGNNLQFAALLVLNGLILFATFLALGIVLS------VVGSVNMAAAKILAVVLSIPVNLFLSLFSVSLLSSLYGFFVEQRKF 768
+LP I+HAL +V RI PW +VLA +++ +FS + P+ LVIA ++++ F+SIAVNWHRYILLD++ ++FRLD W Y G L+I L V F+L + + SLS + ++ + G I I R+SV LPA+AL R+DF ++ A ++GN + ILF LA+GI ++ + ++ A +++ +L I V L + +++L+SLYGFFVE R F
Sbjct: 4 QLPTGLCIEHALTSVRNNIGYAFRISWPWYVVLAVVNIGILTFSGYAVAGGIDVHPVIFMPIILVIALINMLAFASIAVNWHRYILLDQVPTGSELFRLDGLTWRYFGNILLIGLIVAVA-FLLLVLLLQVFASLSTITSIAAILIGLAGLVFASISIYRLSVKLPAVALGRRDFSLSHAWAASRGNKQPIFFV------ILFQFSLAIGIAIAFLALDFALALIDPIIAFVVSQLLQIFVGWLLVILGITILTSLYGFFVEGRDF 262
BLAST of mRNA_P-wetherbeei_contig17044.1.1 vs. uniprot
Match: A0A6G6WNN5_9HYPH (Uncharacterized protein n=1 Tax=Nordella sp. HKS 07 TaxID=2712222 RepID=A0A6G6WNN5_9HYPH) HSP 1 Score: 102 bits (255), Expect = 1.430e-22 Identity = 88/269 (32.71%), Postives = 139/269 (51.67%), Query Frame = 1
Query: 13 KLPAFQTIKHALKAVFQFRNAGARIGLPWVLVLAGMSVIDRSFSAAPDPANGTASMMFPGP-MELVIAALSLVI----FSSIAVNWHRYILLDEITASEKIFRLDRPVWDYVGRTLIIMLATL-------VPIFVLSFI----FVTALPSLSPLLAVPFFVAGIYIMRMSVALPALALERKDFGITAALQVTQGNNLQFAALLVLNGLILF-ATFLALGIVLSVVGSVNMAAAKILAVVLSIPVNLFLSLFSVSLLSSLYGFFVEQRKF 768
+LPA I+HA+ +V RI PW +++ + ++ + N +F P + L+ + +S ++ F+SIAVNWHRYILLDE+ + I R+D W Y G L+I + + VP+ ++ I LP L L+ +P V +R+SV LPA+AL R DFG+ A+ T+ +NLQ L+ L + LF + +G + V+ A +A L N +++FS+++L+SLYGFFVE R F
Sbjct: 4 QLPAGTCIRHAINSVRNNLTYAFRISWPWYVIVIPLIIVANLLLSYAAGGN-----LFEAPGLNLLNSLISGLLIGFAFASIAVNWHRYILLDEVPDARGILRVDDKTWRYFGNMLLIFVILVAAGMVIGVPLGIIGGIAFANVADYLPILLLLIIIP--VVSTLALRLSVKLPAIALGRGDFGMKHAMNATK-DNLQPIFLVALFEVALFLGAIVLIGAISYAFHVVSPTLAAAIAFALQFAANWIITIFSITVLTSLYGFFVEGRDF 264
BLAST of mRNA_P-wetherbeei_contig17044.1.1 vs. uniprot
Match: A0A537P074_9PROT (Uncharacterized protein (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537P074_9PROT) HSP 1 Score: 99.8 bits (247), Expect = 8.980e-22 Identity = 75/188 (39.89%), Postives = 105/188 (55.85%), Query Frame = 1
Query: 13 KLPAFQTIKHALKAVFQFRNAGARIGLPWVLVLAGMSVIDRSFSAAPDPANGTASMMFPGPMELVIAALSLVIFSSIAVNWHRYILLDEITASEKIFRLDRPVWDYVGRTLIIML----ATLVPIFVLSFIFVTALPS-----LSPLLAVPFFVAGIYIMRMSVALPALALERKDFGITAALQVTQGN 549
+LPA I+HA+ +V RI PW VL +S F+ + GT+SM LV+A +SLV F+SIAVNWHRYILLDE+ ++FRLD W Y G L+I+L A L+ + LS + + + L L+ +P +AG+ +R+SV LPA+AL R+DF + A VTQ N
Sbjct: 4 QLPAGTCIRHAVNSVRNNIAYAFRISWPWYAVLIPLSFAMFGFAGL--FSLGTSSMTPFFLAFLVLALISLVAFASIAVNWHRYILLDEMPKGREVFRLDDKTWRYFGNLLLILLILVGACLLVMLPLSILAASTNAAEFSVVLIALIILP--IAGVLSLRLSVKLPAIALGRRDFLLKDAWSVTQAN 187
BLAST of mRNA_P-wetherbeei_contig17044.1.1 vs. uniprot
Match: A0A7Y2FSE2_9HYPH (Uncharacterized protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7Y2FSE2_9HYPH) HSP 1 Score: 94.7 bits (234), Expect = 1.340e-19 Identity = 88/254 (34.65%), Postives = 126/254 (49.61%), Query Frame = 1
Query: 13 KLPAFQTIKHALKAVFQFRNAGARIGLPWVLVLAGMSVIDRSFSAAPDPANGTASMMFPGPMELV-IAALSLVIFSSIAVNWHRYILLDEITASEKIFRLDRPVWDYVGRTLIIMLATLVPIFVLSFIFVTALPSLSPLLAVPFFVAGIYIM-RMSVALPALALERKDFGITAALQVTQGNNLQFAALLVLNGLILFATFLALGIVLSVVGSVNMAAAKILAVVLSIPVNLFLSLFSVSLLSSLYGFFVEQRKF 768
KLP F I+H L F RI W++V + A D A +AS + + V + A++L+ +SIAV WHRYILLDE R+D VW YVG L I + LV I V + + L+ LL P + I+ RMS+ LPA+ALER+DF + + GN L + L+ +A+ IV + VG + A ++ V+ + F +F +SLL++LYGFFVE R F
Sbjct: 4 KLPVFAAIRHMLLLSFNNLGQAFRITWAWMVVFVVTIAMFIWIIAGVDIATPSASDLVSLAVVFVFLIAIALMATASIAVAWHRYILLDEGGNVAFNLRIDGLVWRYVGNALAIGIVGLVLIGV-PIVVSMQVSELAILLVFPLLLLLAPILYRMSIKLPAVALERRDFRFSDGFDASAGNYWPLVGLAAVYVLVAIVINIAVAIV-TFVGLIFGPLAVVVQVLATALAEWFGIVFGISLLTTLYGFFVEGRSF 255
BLAST of mRNA_P-wetherbeei_contig17044.1.1 vs. uniprot
Match: A0A2W2BJ66_9HYPH (Uncharacterized protein n=2 Tax=Aestuariivirga litoralis TaxID=2650924 RepID=A0A2W2BJ66_9HYPH) HSP 1 Score: 73.2 bits (178), Expect = 1.000e-11 Identity = 77/253 (30.43%), Postives = 123/253 (48.62%), Query Frame = 1
Query: 94 PWVLVLAGMSVIDRSFSAAPD-----PANGTASMMFPGPMELVIAAL---SLVIFSSIAVNWHRYILLDEITASEKIFRLDRPVWDYVGRTLIIMLATLVPIFVLSFI---------FVTALPSLSPLLA-----VPFFVAGIYIMRMSVALPALALERKDFGITAALQVTQGNNLQFAA--LLVLN-----GLILFATFLALGIVLSVVGSVNMAAAKILAVVLSIPVNLFLSLFSVSLLSSLYGFFVEQRK 765
PW+LV AG+ + F PD +G A++ +A L S++ FSS+AVNWHR +LLDE + RLD +W Y+G T +++L TLVP+ V++ I F + S LLA +P V + + R+ + LPA+A+ R D+G AA ++G L A L+VL GL+ F L VL G + ++ + + +N + ++ +++LYG E R+
Sbjct: 4 PWMLVYAGVQTLALLFQ--PDVLVVLSGDGPAALRMTSSGWWTVALLMGISMLAFSSLAVNWHRLLLLDEEAEGVERLRLDGLLWRYLGNTALLIL-TLVPVAVIAMIAGLSISFSVFGSGNGMGSFLLAFGIALLPVAVVLVVLERLMIKLPAIAIGRSDYGFGAAWDDSRGEFLSLAGFVLMVLGTTYGLGLLASVPFTLLSAVLGTHGGLG----PLIGSLWQLAINWIGWIIGLNAITTLYGILAEGRE 249 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17044.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig17044.1.1 >prot_P-wetherbeei_contig17044.1.1 ID=prot_P-wetherbeei_contig17044.1.1|Name=mRNA_P-wetherbeei_contig17044.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=255bp MNKLPAFQTIKHALKAVFQFRNAGARIGLPWVLVLAGMSVIDRSFSAAPDback to top mRNA from alignment at P-wetherbeei_contig17044:476..1246- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig17044.1.1 ID=mRNA_P-wetherbeei_contig17044.1.1|Name=mRNA_P-wetherbeei_contig17044.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=771bp|location=Sequence derived from alignment at P-wetherbeei_contig17044:476..1246- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig17044:476..1246- >mRNA_P-wetherbeei_contig17044.1.1 ID=mRNA_P-wetherbeei_contig17044.1.1|Name=mRNA_P-wetherbeei_contig17044.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=765bp|location=Sequence derived from alignment at P-wetherbeei_contig17044:476..1246- (Phaeothamnion wetherbeei SAG_119_79)back to top |