mRNA_P-wetherbeei_contig17037.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig17037.1.1 vs. uniprot
Match: A0A6A8QEA8_9PROT (Shikimate kinase n=1 Tax=Telmatospirillum sp. TaxID=2079197 RepID=A0A6A8QEA8_9PROT) HSP 1 Score: 233 bits (595), Expect = 1.080e-75 Identity = 113/170 (66.47%), Postives = 139/170 (81.76%), Query Frame = 1
Query: 4 VDRSIVMVGLMGAGKTAIGKRLAARLALPFVDTDKEIEQAAGCAIPEIFARYGEPAFRDGERRVIARLLAGPRCVLATGGGAFMDPETRAAVKAAGLSVWLKADLDTLVRRTARRTNRPLLNRGNPRDVLANLMDARYPVYAEADIHVQSLESPPDETTSRVVDALSRHF 513
+ RSIV+VGLMGAGK+ +G+RLA RL LPF+D D EIE AAGC+I EIFARYGE AFRDGER+V+ RLLAGPRCVLATGGGAFMDPETRA + G+SVW++ADLD LV+RTA R +RPLL +G+PR++L L+ RYPVYA AD+ V + + PP+ T RV+DAL+RH
Sbjct: 8 IPRSIVLVGLMGAGKSCVGRRLAQRLGLPFIDADTEIEAAAGCSISEIFARYGEGAFRDGERKVVGRLLAGPRCVLATGGGAFMDPETRALIAEKGISVWIRADLDLLVKRTAGRDHRPLLRQGDPREILGRLIADRYPVYAAADLAVDTADRPPEFTVDRVLDALARHL 177
BLAST of mRNA_P-wetherbeei_contig17037.1.1 vs. uniprot
Match: UPI000419F21D (shikimate kinase n=1 Tax=Niveispirillum irakense TaxID=34011 RepID=UPI000419F21D) HSP 1 Score: 230 bits (586), Expect = 2.370e-74 Identity = 116/175 (66.29%), Postives = 140/175 (80.00%), Query Frame = 1
Query: 1 PVDRSIVMVGLMGAGKTAIGKRLAARLALPFVDTDKEIEQAAGCAIPEIFARYGEPAFRDGERRVIARLLAGPRCVLATGGGAFMDPETRAAVKAAGLSVWLKADLDTLVRRTARRTNRPLLNRGNPRDVLANLMDARYPVYAEADIHVQSLESPPDETTSRVVDALSRHFETAA 525
P+ +++V++GLMGAGKT+IGKRLAARL LPFVD D EIE+AAGC I EIF R+GE FRDGERRVIARLL P VL+TGGGAFMD ETR ++ GLS+WL+ADLD LV RTARR +RPLL +G+PR+VL LMDARYPVYAEAD+ V S +SPP+ TT RV++ L +H A
Sbjct: 9 PLTKTLVLIGLMGAGKTSIGKRLAARLGLPFVDADNEIERAAGCTIQEIFDRFGEAGFRDGERRVIARLLEQPVHVLSTGGGAFMDAETRGLIRERGLSLWLRADLDLLVHRTARRDHRPLLRQGDPREVLQRLMDARYPVYAEADLVVDSDDSPPEVTTERVLETLRQHLAVPA 183
BLAST of mRNA_P-wetherbeei_contig17037.1.1 vs. uniprot
Match: UPI000E6AD39F (shikimate kinase n=1 Tax=Indioceanicola profundi TaxID=2220096 RepID=UPI000E6AD39F) HSP 1 Score: 228 bits (582), Expect = 1.430e-73 Identity = 116/170 (68.24%), Postives = 138/170 (81.18%), Query Frame = 1
Query: 4 VDRSIVMVGLMGAGKTAIGKRLAARLALPFVDTDKEIEQAAGCAIPEIFARYGEPAFRDGERRVIARLLAGPRCVLATGGGAFMDPETRAAVKAAGLSVWLKADLDTLVRRTARRTNRPLLNRGNPRDVLANLMDARYPVYAEADIHVQSLESPPDETTSRVVDALSRHF 513
+ R+IV+VGLMGAGKT+IG+RLA RL LPFVD D EIE AAGC IPEIF R+GE FRDGER+VIARLL GP VL+TGGGAFMD ETRA ++ GLSVWL+A+LD LV+RTARR +RPLL G+PR++L LM+ RYPVYAEAD+ V S +SP +ETT RVV+AL H
Sbjct: 13 IPRTIVLVGLMGAGKTSIGRRLATRLGLPFVDADHEIEAAAGCTIPEIFERFGEAGFRDGERKVIARLLDGPVHVLSTGGGAFMDQETRALIREKGLSVWLRAELDLLVQRTARRDHRPLLRSGDPREILRGLMEKRYPVYAEADLTVDSDDSPLEETTDRVVEALHLHL 182
BLAST of mRNA_P-wetherbeei_contig17037.1.1 vs. uniprot
Match: B6IUW9_RHOCS (Shikimate kinase n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) TaxID=414684 RepID=B6IUW9_RHOCS) HSP 1 Score: 228 bits (580), Expect = 2.880e-73 Identity = 120/172 (69.77%), Postives = 134/172 (77.91%), Query Frame = 1
Query: 10 RSIVMVGLMGAGKTAIGKRLAARLALPFVDTDKEIEQAAGCAIPEIFARYGEPAFRDGERRVIARLLAGPRCVLATGGGAFMDPETRAAVKAAGLSVWLKADLDTLVRRTARRTNRPLLNRGNPRDVLANLMDARYPVYAEADIHVQSLESPPDETTSRVVDALSRHFETAA 525
R++V+VGLMGAGKT+IGKRLAA+L LPFVD D EIE AAGC I EIF R+GE FRDGERRVIARLL G VL+TGGGAFM PETRA ++ GLSVWL+A LD LV RT RR NRPLL +GNPRD+LA LM RYPVYAEADI V S E PP+ET RV+ AL H AA
Sbjct: 11 RTLVLVGLMGAGKTSIGKRLAAKLHLPFVDADHEIESAAGCTIQEIFDRFGEAQFRDGERRVIARLLEGQVRVLSTGGGAFMHPETRALIRERGLSVWLRAPLDLLVARTGRRDNRPLLKQGNPRDILAALMAQRYPVYAEADITVDSDERPPEETAERVLAALRHHLAAAA 182
BLAST of mRNA_P-wetherbeei_contig17037.1.1 vs. uniprot
Match: A0A858R9D7_9PROT (Shikimate kinase n=1 Tax=Rhodospirillaceae bacterium B3 TaxID=2728875 RepID=A0A858R9D7_9PROT) HSP 1 Score: 227 bits (579), Expect = 3.470e-73 Identity = 118/168 (70.24%), Postives = 136/168 (80.95%), Query Frame = 1
Query: 10 RSIVMVGLMGAGKTAIGKRLAARLALPFVDTDKEIEQAAGCAIPEIFARYGEPAFRDGERRVIARLLAGPRCVLATGGGAFMDPETRAAVKAAGLSVWLKADLDTLVRRTARRTNRPLLNRGNPRDVLANLMDARYPVYAEADIHVQSLESPPDETTSRVVDALSRHF 513
R++V++GLMGAGKT+IGKRLA RL LPFVD D EIE+AAGC I EIF RYGE FRDGERRVIARLL P VL+TGGGAFMDP TRA ++ GLSVWL+ADLD LV RTARR +RPLL +G+PR+VL +LM+ RYPVYAEAD+ V S +SPPD TT RVV AL H
Sbjct: 16 RTVVLIGLMGAGKTSIGKRLATRLHLPFVDADHEIERAAGCTIQEIFDRYGEAGFRDGERRVIARLLDQPVQVLSTGGGAFMDPITRALIRDKGLSVWLRADLDLLVHRTARRDHRPLLRQGDPREVLRSLMEKRYPVYAEADLTVDSDDSPPDVTTDRVVAALRDHL 183
BLAST of mRNA_P-wetherbeei_contig17037.1.1 vs. uniprot
Match: A0A1Y6BZJ4_9HYPH (Shikimate kinase n=1 Tax=Tistlia consotensis USBA 355 TaxID=560819 RepID=A0A1Y6BZJ4_9HYPH) HSP 1 Score: 226 bits (575), Expect = 1.230e-72 Identity = 116/171 (67.84%), Postives = 137/171 (80.12%), Query Frame = 1
Query: 1 PVDRSIVMVGLMGAGKTAIGKRLAARLALPFVDTDKEIEQAAGCAIPEIFARYGEPAFRDGERRVIARLLAG-PRCVLATGGGAFMDPETRAAVKAAGLSVWLKADLDTLVRRTARRTNRPLLNRGNPRDVLANLMDARYPVYAEADIHVQSLESPPDETTSRVVDALSRH 510
P +RSIV+VGLMGAGK+ IG++LA RL L FVD D EIE AAGC+IPEIF R+GE AFRDGERRVIARLL R VLATGGGAFMD TR A+ G+SVWL+ADL+ L+RRT+RR+ RPLL RGNPR+ L+ L+ RYPVYAEADI V S++ PPDET RV++AL RH
Sbjct: 15 PAERSIVLVGLMGAGKSCIGRKLAQRLGLRFVDADSEIEAAAGCSIPEIFERHGEAAFRDGERRVIARLLESHDRQVLATGGGAFMDAGTRRAIAGTGVSVWLRADLELLLRRTSRRSKRPLLRRGNPRETLSRLIGERYPVYAEADITVDSVDGPPDETVDRVLEALKRH 185
BLAST of mRNA_P-wetherbeei_contig17037.1.1 vs. uniprot
Match: A0A2E8XNM5_9PROT (Shikimate kinase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2E8XNM5_9PROT) HSP 1 Score: 225 bits (574), Expect = 2.520e-72 Identity = 114/164 (69.51%), Postives = 136/164 (82.93%), Query Frame = 1
Query: 10 RSIVMVGLMGAGKTAIGKRLAARLALPFVDTDKEIEQAAGCAIPEIFARYGEPAFRDGERRVIARLLAGPRCVLATGGGAFMDPETRAAVKAAGLSVWLKADLDTLVRRTARRTNRPLLNRGNPRDVLANLMDARYPVYAEADIHVQSLESPPDETTSRVVDAL 501
RSIVMVGLMGAGK++IG+RLA+RL LPFVD D EIE AAGC I E F R+GE AFRDGERRVIARLL GPR VLATGGGAFMD +TR A+ +G+SVWL+ADL+TLVRRT+RR++RPLLN +P + L NLM+ RYP+Y +ADI V+S + PPD+T RVV AL
Sbjct: 25 RSIVMVGLMGAGKSSIGRRLASRLDLPFVDADSEIEAAAGCTIAEFFERHGEAAFRDGERRVIARLLDGPRKVLATGGGAFMDEDTREAIGRSGISVWLRADLETLVRRTSRRSDRPLLNNDDPAETLKNLMETRYPIYEQADIDVESDDGPPDQTVDRVVAAL 188
BLAST of mRNA_P-wetherbeei_contig17037.1.1 vs. uniprot
Match: UPI001D048595 (shikimate kinase n=1 Tax=Pelagibius sp. NBU2595 TaxID=2762760 RepID=UPI001D048595) HSP 1 Score: 225 bits (573), Expect = 4.210e-72 Identity = 112/176 (63.64%), Postives = 139/176 (78.98%), Query Frame = 1
Query: 4 VDRSIVMVGLMGAGKTAIGKRLAARLALPFVDTDKEIEQAAGCAIPEIFARYGEPAFRDGERRVIARLLAGPRCVLATGGGAFMDPETRAAVKAAGLSVWLKADLDTLVRRTARRTNRPLLNRGNPRDVLANLMDARYPVYAEADIHVQSLESPPDETTSRVVDALSRHFETAARA 531
V R+I +VGLMGAGK+ IG+ LAA L LPFVD DKEIE AAGC+I +IFA +GE AFRDGERRVIARLL P+ VLATGGGAF+DPETR ++ SVWL+AD+D L+RRT+RR NRPLL RG+PR +L +L++ RYPVYAEAD+ V S++ PP+ T +RV+ L RHFE + A
Sbjct: 19 VPRTIALVGLMGAGKSCIGRLLAASLDLPFVDADKEIEAAAGCSIEDIFAAHGEEAFRDGERRVIARLLDEPKMVLATGGGAFLDPETRQLIRERATSVWLRADVDLLLRRTSRRNNRPLLKRGDPRQILNDLIEQRYPVYAEADVVVDSVDGPPETTLARVIKGLRRHFEESGAA 194
BLAST of mRNA_P-wetherbeei_contig17037.1.1 vs. uniprot
Match: A0A7C9UXJ0_9PROT (Shikimate kinase n=1 Tax=Magnetospirillum aberrantis SpK TaxID=908842 RepID=A0A7C9UXJ0_9PROT) HSP 1 Score: 224 bits (571), Expect = 4.540e-72 Identity = 107/169 (63.31%), Postives = 137/169 (81.07%), Query Frame = 1
Query: 10 RSIVMVGLMGAGKTAIGKRLAARLALPFVDTDKEIEQAAGCAIPEIFARYGEPAFRDGERRVIARLLAGPRCVLATGGGAFMDPETRAAVKAAGLSVWLKADLDTLVRRTARRTNRPLLNRGNPRDVLANLMDARYPVYAEADIHVQSLESPPDETTSRVVDALSRHFE 516
R IV+VGLMGAGK+ +G+RLAARL +PFVD D E E AAGC+I + FARYGEPAFR+GER+VIARL+ GP CVLATGGGAF DPETR +K +SVW++ADLD LV+RT+ R +RPLL G+PR++L+ LMDARYP+YA+ADI V + + PP+ T ++V+D L+R E
Sbjct: 15 RPIVLVGLMGAGKSCVGRRLAARLGIPFVDADSEFEAAAGCSIADFFARYGEPAFREGERKVIARLMEGPLCVLATGGGAFCDPETRDRIKQGAMSVWIRADLDLLVKRTSGRDHRPLLKTGDPREILSRLMDARYPLYAQADIIVDTTDEPPEVTVAKVLDELARTLE 183
BLAST of mRNA_P-wetherbeei_contig17037.1.1 vs. uniprot
Match: A0A239G622_9PROT (Shikimate kinase n=2 Tax=Azospirillaceae TaxID=2829815 RepID=A0A239G622_9PROT) HSP 1 Score: 224 bits (572), Expect = 4.750e-72 Identity = 116/171 (67.84%), Postives = 138/171 (80.70%), Query Frame = 1
Query: 4 VDRSIVMVGLMGAGKTAIGKRLAARLALPFVDTDKEIEQAAGCAIPEIFARYGEPAFRDGERRVIARLLAGPRC-VLATGGGAFMDPETRAAVKAAGLSVWLKADLDTLVRRTARRTNRPLLNRGNPRDVLANLMDARYPVYAEADIHVQSLESPPDETTSRVVDALSRHF 513
+ ++IV++GLMGAGKT+IGKRLAARL LPFVD D EIE+AAGC I EIF R+GE FRDGERRVIARLL P VL+TGGGAFMD +TRA ++ GLSVWL+ADLD LV+RTARR +RPLL +G PR+VL LM+ RYPVYAEAD+ V S +SPPD+TT RV+ AL H
Sbjct: 10 IPKTIVLIGLMGAGKTSIGKRLAARLGLPFVDADHEIERAAGCTIQEIFDRFGEAGFRDGERRVIARLLEQPPVQVLSTGGGAFMDAQTRAMIRDHGLSVWLRADLDLLVQRTARRDHRPLLRQGEPREVLGRLMEIRYPVYAEADLTVDSDDSPPDQTTERVLAALRAHL 180 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17037.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig17037.1.1 >prot_P-wetherbeei_contig17037.1.1 ID=prot_P-wetherbeei_contig17037.1.1|Name=mRNA_P-wetherbeei_contig17037.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=171bp MVGLMGAGKTAIGKRLAARLALPFVDTDKEIEQAAGCAIPEIFARYGEPAback to top mRNA from alignment at P-wetherbeei_contig17037:576..1109- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig17037.1.1 ID=mRNA_P-wetherbeei_contig17037.1.1|Name=mRNA_P-wetherbeei_contig17037.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=534bp|location=Sequence derived from alignment at P-wetherbeei_contig17037:576..1109- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig17037:576..1109- >mRNA_P-wetherbeei_contig17037.1.1 ID=mRNA_P-wetherbeei_contig17037.1.1|Name=mRNA_P-wetherbeei_contig17037.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=513bp|location=Sequence derived from alignment at P-wetherbeei_contig17037:576..1109- (Phaeothamnion wetherbeei SAG_119_79)back to top |