mRNA_P-wetherbeei_contig1701.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1701.2.1
Unique NamemRNA_P-wetherbeei_contig1701.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1701.2.1 vs. uniprot
Match: A0A3C0TSX8_9PROT (Cyclohexanecarboxyl-CoA dehydrogenase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TSX8_9PROT)

HSP 1 Score: 728 bits (1878), Expect = 2.470e-264
Identity = 353/388 (90.98%), Postives = 374/388 (96.39%), Query Frame = 1
Query:    1 MDYQLTDEQRIIVDTIRKFVREEICPLEDGLDPDAGDLEPHDKARLTAKIKDMGFYGLGIPAEYGGPDIDTTTMTLMAIEMSQHRAGLYNPCYGVFGGAGLAQLFEATEEQKEKYLYPTLSGEMTTFFGLTEPSGGSDPARAIQTRAVRDGDDWVLNGSKIFISGADRADFGLLFARTDTDKGRGGVTCFIVETKTPGFYVRRVVHTLRSTRYATEIQIENMRVPHKNVLGEVNKGFAIANDRLSRQRIPYAAGCVGVAIKAQEMAIDYCKVRSTFGAPLATRQSIQWMIVDNELDIRTARYLCLDAAQKADRGEEFRTEAAMAKLVGSEAGGRVVDRAMQIFGGYGMTKDFPFERWYREMRIRRVGEGPSEVQRLVIARDLIGGAFH 1164
            MDYQLT+EQRII+DT+RKF+REEI PLE+ LDPDAGDLEP DKARL AK+KDMGFYGLGIP E+GGPD+D TT TLMA+EM+QHRAGLYNP YGVFGGAGLAQLFEA EEQKEKYLYPTL GE +TFFGLTEPSGGSDPARAIQTRAVRDGDDWVLNG+KIFISGADRADFGLLFARTD+DKGRGGVTCFIV+  +PGFYVRRVVHTLRSTRYATEIQIEN+RVPHKN+LGEVNKGFAIANDRL+RQRIPYAAGCVGVAIKAQEMAI+YCK+RSTFG PLATRQSIQWMIVDNELDIRTARYLCLDAAQKADRGEEFRTEAAMAKLVGSEAGGRVVDRAMQIFGGYGMTKDFPFERWYREMRIRR+GEGPSEVQRLVIARDLIGGAFH
Sbjct:    1 MDYQLTEEQRIIIDTVRKFMREEILPLEEKLDPDAGDLEPEDKARLVAKVKDMGFYGLGIPPEFGGPDLDITTQTLMAMEMTQHRAGLYNPAYGVFGGAGLAQLFEANEEQKEKYLYPTLRGEKSTFFGLTEPSGGSDPARAIQTRAVRDGDDWVLNGAKIFISGADRADFGLLFARTDSDKGRGGVTCFIVDVPSPGFYVRRVVHTLRSTRYATEIQIENLRVPHKNILGEVNKGFAIANDRLTRQRIPYAAGCVGVAIKAQEMAIEYCKIRSTFGGPLATRQSIQWMIVDNELDIRTARYLCLDAAQKADRGEEFRTEAAMAKLVGSEAGGRVVDRAMQIFGGYGMTKDFPFERWYREMRIRRIGEGPSEVQRLVIARDLIGGAFH 388          
BLAST of mRNA_P-wetherbeei_contig1701.2.1 vs. uniprot
Match: A0A353LQQ3_9PROT (Cyclohexanecarboxyl-CoA dehydrogenase n=3 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A353LQQ3_9PROT)

HSP 1 Score: 669 bits (1727), Expect = 2.600e-241
Identity = 321/388 (82.73%), Postives = 355/388 (91.49%), Query Frame = 1
Query:    1 MDYQLTDEQRIIVDTIRKFVREEICPLEDGLDPDAGDLEPHDKARLTAKIKDMGFYGLGIPAEYGGPDIDTTTMTLMAIEMSQHRAGLYNPCYGVFGGAGLAQLFEATEEQKEKYLYPTLSGEMTTFFGLTEPSGGSDPARAIQTRAVRDGDDWVLNGSKIFISGADRADFGLLFARTDTDKGRGGVTCFIVETKTPGFYVRRVVHTLRSTRYATEIQIENMRVPHKNVLGEVNKGFAIANDRLSRQRIPYAAGCVGVAIKAQEMAIDYCKVRSTFGAPLATRQSIQWMIVDNELDIRTARYLCLDAAQKADRGEEFRTEAAMAKLVGSEAGGRVVDRAMQIFGGYGMTKDFPFERWYREMRIRRVGEGPSEVQRLVIARDLIGGAFH 1164
            +DYQ+TDEQRII+D +RKFVREEI PLE+ LDPDAG+++P D ARL    K+MG YGLGIP E+GGP+ID TTMTLMA EM+QHRAGLYNPCY VFGGAGLAQL+EAT+ QKEKYLYP L GE   FFGLTEPSGGSDPARAIQTRAV+DG DWVLNG+KIFISGADRADFG+LFARTD DKGRGG+TCF+++T  PGF VRRVVHTLRS RYATEI IE++RVP +NVLGEVNKGFAIANDRLSRQRIPYAAGCVGVAIKAQEMAI+YCK+R TFGAPLATRQSIQWMIVDNE+DIRTAR++CL+AAQKADRGE FRTEAAMAKL+GSEAGGRVVDRAMQI GGYGMTKD P ERWYREMRIRR+GEGPSEVQRLV+ARDLIGG+FH
Sbjct:    2 VDYQMTDEQRIIIDMVRKFVREEIVPLEEKLDPDAGEIDPEDHARLVEMTKNMGLYGLGIPPEFGGPEIDVTTMTLMAFEMAQHRAGLYNPCYSVFGGAGLAQLYEATDAQKEKYLYPVLRGEKGAFFGLTEPSGGSDPARAIQTRAVKDGSDWVLNGAKIFISGADRADFGILFARTDADKGRGGITCFLIDTDMPGFNVRRVVHTLRSARYATEISIEDLRVPQENVLGEVNKGFAIANDRLSRQRIPYAAGCVGVAIKAQEMAIEYCKIRETFGAPLATRQSIQWMIVDNEIDIRTARHICLEAAQKADRGESFRTEAAMAKLLGSEAGGRVVDRAMQIHGGYGMTKDLPLERWYREMRIRRIGEGPSEVQRLVMARDLIGGSFH 389          
BLAST of mRNA_P-wetherbeei_contig1701.2.1 vs. uniprot
Match: A0A496X4V6_9GAMM (Cyclohexanecarboxyl-CoA dehydrogenase n=7 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A496X4V6_9GAMM)

HSP 1 Score: 631 bits (1628), Expect = 3.000e-226
Identity = 296/388 (76.29%), Postives = 346/388 (89.18%), Query Frame = 1
Query:    1 MDYQLTDEQRIIVDTIRKFVREEICPLEDGLDPDAGDLEPHDKARLTAKIKDMGFYGLGIPAEYGGPDIDTTTMTLMAIEMSQHRAGLYNPCYGVFGGAGLAQLFEATEEQKEKYLYPTLSGEMTTFFGLTEPSGGSDPARAIQTRAVRDGDDWVLNGSKIFISGADRADFGLLFARTDTDKGRGGVTCFIVETKTPGFYVRRVVHTLRSTRYATEIQIENMRVPHKNVLGEVNKGFAIANDRLSRQRIPYAAGCVGVAIKAQEMAIDYCKVRSTFGAPLATRQSIQWMIVDNELDIRTARYLCLDAAQKADRGEEFRTEAAMAKLVGSEAGGRVVDRAMQIFGGYGMTKDFPFERWYREMRIRRVGEGPSEVQRLVIARDLIGGAFH 1164
            MDYQL++EQ+++VD +R+FVR EICPLED LDPDAG++ P D  RL    ++MG YGLGIP E+GGPD+D TT TL+A EM+QHRAGLYNPCY VFGGAGLAQL+EAT+ QKEKYLYP L GE T+FF LTEPSGGSDP RAIQTR V+DGDDW+LNG+KIFISGAD ADFG+LFART  DK R GVTCF+V+T  PGF+VRRVVHTLRST+YATEIQIEN+RVP +N+LGE+NKGFAIANDRLSR RIPYAAGC+GVAIKAQ MAI+Y K+R TFG  LA+RQ+IQWMIVDNE+DIRT+R++C++AAQKADRG+++RTEAAMAKL+GSEAGGRVVDR MQI GGYGMTKD P ERWYREMRIRR+GEGPSEVQRLV+AR++IGG+FH
Sbjct:    1 MDYQLSEEQQMLVDMVRRFVRTEICPLEDNLDPDAGEIAPEDSERLKEMTRNMGLYGLGIPPEFGGPDVDVTTQTLLAFEMAQHRAGLYNPCYNVFGGAGLAQLYEATDMQKEKYLYPVLRGEKTSFFALTEPSGGSDPGRAIQTRGVQDGDDWILNGAKIFISGADHADFGILFARTSEDKTRNGVTCFLVDTDMPGFHVRRVVHTLRSTKYATEIQIENLRVPKENILGELNKGFAIANDRLSRYRIPYAAGCIGVAIKAQAMAIEYVKIRETFGGLLASRQAIQWMIVDNEIDIRTSRHICMEAAQKADRGDDYRTEAAMAKLLGSEAGGRVVDRVMQIHGGYGMTKDLPLERWYREMRIRRIGEGPSEVQRLVMARNIIGGSFH 388          
BLAST of mRNA_P-wetherbeei_contig1701.2.1 vs. uniprot
Match: A0A2A5A0Z3_9GAMM (Cyclohexanecarboxyl-CoA dehydrogenase n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A2A5A0Z3_9GAMM)

HSP 1 Score: 630 bits (1625), Expect = 8.590e-226
Identity = 300/388 (77.32%), Postives = 350/388 (90.21%), Query Frame = 1
Query:    1 MDYQLTDEQRIIVDTIRKFVREEICPLEDGLDPDAGDLEPHDKARLTAKIKDMGFYGLGIPAEYGGPDIDTTTMTLMAIEMSQHRAGLYNPCYGVFGGAGLAQLFEATEEQKEKYLYPTLSGEMTTFFGLTEPSGGSDPARAIQTRAVRDGDDWVLNGSKIFISGADRADFGLLFARTDTDKGRGGVTCFIVETKTPGFYVRRVVHTLRSTRYATEIQIENMRVPHKNVLGEVNKGFAIANDRLSRQRIPYAAGCVGVAIKAQEMAIDYCKVRSTFGAPLATRQSIQWMIVDNELDIRTARYLCLDAAQKADRGEEFRTEAAMAKLVGSEAGGRVVDRAMQIFGGYGMTKDFPFERWYREMRIRRVGEGPSEVQRLVIARDLIGGAFH 1164
            MDYQL++EQ++IVD +R+FV+EEI PLE+ LDPDAG+++P DK RL A  K MG +GLGIP E+GGP+I  TT TL+A E+ QHRAGLYNP +G FGGAGLAQLFEATE QKEKYL+P L GE ++FFGLTEPSGGSDP RAIQTR V+DGDDWVLNGSKIFISGAD+ADFG+LFART  DKGR G+TCF++++  PGF VRRVVHTLRST+YATEIQIEN+RVP +N+LGEVNKGFAIA+DRL+RQRIPYAAGCVGVAIKAQ+MAI+Y K+R TFG  LA+RQ+IQWMIVDNE+DIRT+R++CL+AAQKADRGE+FRTEAAMAKL+GSEAGGRVVDRAMQI GGYGMTKD P ERWYREMRIRR+GEGPSEVQRLV+AR+LIGG+FH
Sbjct:    1 MDYQLSEEQQLIVDNVRRFVKEEIIPLEENLDPDAGEIDPKDKQRLIAITKQMGLFGLGIPPEFGGPEISITTQTLIAFEIVQHRAGLYNPSFGAFGGAGLAQLFEATEAQKEKYLFPVLRGEKSSFFGLTEPSGGSDPGRAIQTRGVQDGDDWVLNGSKIFISGADQADFGILFARTSEDKGRNGITCFLIDSDMPGFNVRRVVHTLRSTKYATEIQIENLRVPKENILGEVNKGFAIASDRLARQRIPYAAGCVGVAIKAQQMAIEYSKLRETFGGVLASRQAIQWMIVDNEIDIRTSRHICLEAAQKADRGEDFRTEAAMAKLLGSEAGGRVVDRAMQIHGGYGMTKDLPLERWYREMRIRRIGEGPSEVQRLVMARNLIGGSFH 388          
BLAST of mRNA_P-wetherbeei_contig1701.2.1 vs. uniprot
Match: A0A3A0FGR1_9BACT (Cyclohexanecarboxyl-CoA dehydrogenase n=2 Tax=Bacteria TaxID=2 RepID=A0A3A0FGR1_9BACT)

HSP 1 Score: 614 bits (1584), Expect = 1.500e-219
Identity = 300/388 (77.32%), Postives = 338/388 (87.11%), Query Frame = 1
Query:    1 MDYQLTDEQRIIVDTIRKFVREEICPLEDGLDPDAGDLEPHDKARLTAKIKDMGFYGLGIPAEYGGPDIDTTTMTLMAIEMSQHRAGLYNPCYGVFGGAGLAQLFEATEEQKEKYLYPTLSGEMTTFFGLTEPSGGSDPARAIQTRAVRDGDDWVLNGSKIFISGADRADFGLLFARTDTDKGRGGVTCFIVETKTPGFYVRRVVHTLRSTRYATEIQIENMRVPHKNVLGEVNKGFAIANDRLSRQRIPYAAGCVGVAIKAQEMAIDYCKVRSTFGAPLATRQSIQWMIVDNELDIRTARYLCLDAAQKADRGEEFRTEAAMAKLVGSEAGGRVVDRAMQIFGGYGMTKDFPFERWYREMRIRRVGEGPSEVQRLVIARDLIGGAFH 1164
            MD +L++EQR+IVDT+RKFVREEI PLE  LDPDA DLEP D ARL A+ K+MGFYGL IPAEYGGP IDTTT TLMAIEMSQHRAGLY PCYGVFGGAGLAQL+EA ++QK++YLYPTL GE   FFGLTEPSGGSDPARAIQT AV+DGDDWVLNGSKIFISGAD ADFG++FAR+D  +GR G+TCFIV+   PGF+VRRVVHTLRST YATE+Q +N+RVP  NVLGEVN+GFAIANDRL+RQRIPYAAGC+GVA+KAQEMAI Y K R TFG  LA RQ+IQWMIVDNE+DIRT+R+L L AA  ADR   FRTEAAMAKLV SEAGGRVVDR+MQI GGYGMTKD P ERWYRE+RIRR+GEGPSEVQR ++ARDL+G +FH
Sbjct:    1 MDLELSEEQRLIVDTVRKFVREEIVPLEADLDPDASDLEPADYARLAAQTKEMGFYGLDIPAEYGGPGIDTTTRTLMAIEMSQHRAGLYAPCYGVFGGAGLAQLYEANDDQKQRYLYPTLRGEKQGFFGLTEPSGGSDPARAIQTSAVKDGDDWVLNGSKIFISGADTADFGIVFARSDAARGREGITCFIVDADMPGFHVRRVVHTLRSTHYATELQFDNLRVPAANVLGEVNRGFAIANDRLTRQRIPYAAGCIGVAVKAQEMAIAYSKQRETFGDLLANRQAIQWMIVDNEIDIRTSRWLTLHAADLADRNRPFRTEAAMAKLVASEAGGRVVDRSMQIHGGYGMTKDLPLERWYREIRIRRIGEGPSEVQRHIMARDLLGSSFH 388          
BLAST of mRNA_P-wetherbeei_contig1701.2.1 vs. uniprot
Match: A0A6N6VMT6_9HYPH (Cyclohexanecarboxyl-CoA dehydrogenase n=5 Tax=Bacteria TaxID=2 RepID=A0A6N6VMT6_9HYPH)

HSP 1 Score: 612 bits (1577), Expect = 1.750e-218
Identity = 290/387 (74.94%), Postives = 340/387 (87.86%), Query Frame = 1
Query:    1 MDYQLTDEQRIIVDTIRKFVREEICPLEDGLDPDAGDLEPHDKARLTAKIKDMGFYGLGIPAEYGGPDIDTTTMTLMAIEMSQHRAGLYNPCYGVFGGAGLAQLFEATEEQKEKYLYPTLSGEMTTFFGLTEPSGGSDPARAIQTRAVRDGDDWVLNGSKIFISGADRADFGLLFARTDTDKGRGGVTCFIVETKTPGFYVRRVVHTLRSTRYATEIQIENMRVPHKNVLGEVNKGFAIANDRLSRQRIPYAAGCVGVAIKAQEMAIDYCKVRSTFGAPLATRQSIQWMIVDNELDIRTARYLCLDAAQKADRGEEFRTEAAMAKLVGSEAGGRVVDRAMQIFGGYGMTKDFPFERWYREMRIRRVGEGPSEVQRLVIARDLIGGAF 1161
            MD+ +TDEQR+I++ +R+FVREE+ PLED LDPD   L P D ARL +K+KDMG +GLG+P EYGGPDIDT TMTL+AIE+SQHRAGLY+PCYG FGGAGLA L+EA+E+ K++YLYPTL+GE   FFGLTEPSGGSDPARAIQTRAV+DGDDWV+NG+KIFISGAD+A++G++FARTD  KGR G+TCFIV+T TPGF+VRRVVHTLRS  YATE+Q ENMRVP  NVLGEVNKGFAIANDRLSRQRIPYAA C+G+AIKAQEM I+Y K+R TFGAPLATRQ++QWM+VDNE+DIRTAR+  LDAA KADRGE FRTEAAMAKL+ +E   RVVDRA+QI GGYG+TKD P ERWYREMRIRR+GEGPSEVQRLV+AR+L G + 
Sbjct:    2 MDFAMTDEQRLIIEQVRRFVREEVAPLEDKLDPDESRLGPDDYARLVSKVKDMGLHGLGVPPEYGGPDIDTVTMTLIAIEISQHRAGLYSPCYGSFGGAGLAHLYEASEDLKKRYLYPTLNGEKHGFFGLTEPSGGSDPARAIQTRAVKDGDDWVINGAKIFISGADKAEYGIVFARTDVGKGRNGITCFIVDTDTPGFHVRRVVHTLRSAYYATELQFENMRVPSANVLGEVNKGFAIANDRLSRQRIPYAASCIGIAIKAQEMCIEYAKLRETFGAPLATRQAVQWMVVDNEIDIRTARWATLDAACKADRGEPFRTEAAMAKLLSTEGASRVVDRAIQIHGGYGVTKDLPLERWYREMRIRRIGEGPSEVQRLVMARNLFGASL 388          
BLAST of mRNA_P-wetherbeei_contig1701.2.1 vs. uniprot
Match: A0A7C2QQF5_9HYPH (Cyclohexanecarboxyl-CoA dehydrogenase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C2QQF5_9HYPH)

HSP 1 Score: 598 bits (1543), Expect = 2.620e-213
Identity = 291/388 (75.00%), Postives = 334/388 (86.08%), Query Frame = 1
Query:    1 MDYQLTDEQRIIVDTIRKFVREEICPLEDGLDPDAGDLEPHDKARLTAKIKDMGFYGLGIPAEYGGPDIDTTTMTLMAIEMSQHRAGLYNPCYGVFGGAGLAQLFEATEEQKEKYLYPTLSGEMTTFFGLTEPSGGSDPARAIQTRAVRDGDDWVLNGSKIFISGADRADFGLLFARTDTDKGRGGVTCFIVETKTPGFYVRRVVHTLRSTRYATEIQIENMRVPHKNVLGEVNKGFAIANDRLSRQRIPYAAGCVGVAIKAQEMAIDYCKVRSTFGAPLATRQSIQWMIVDNELDIRTARYLCLDAAQKADRGEEFRTEAAMAKLVGSEAGGRVVDRAMQIFGGYGMTKDFPFERWYREMRIRRVGEGPSEVQRLVIARDLIGGAFH 1164
            M+ + T+EQR IV T+R+FVREEI PLE  LDPDA +L P D ARL+  +++MGF+GL IPAEYGG  +D  T TLMA+EMSQHRAGLY PCYGVFG AGLAQL+EAT EQKE+YLYP L GE   FFGLTEPSGGSDPARAI+TRAVRDGD WV+NGSK+FISGAD+A FGL+FARTD DKGRGG+TCFIV+T T GF+VRRVVHTLRS+ YATE+Q E++RVPH NVLGEV +GFAIANDRL+RQRIPYAA C+GVA+KAQE+AI+Y K R TFGAPLATRQ++QWMIVDNE+DIRT+ +L L AA KA+RGE FR EA MAKLV +EAGGRVVDRAMQI GGYGMTKD PFERWYREMRIRRVGEGP+EVQR +IARDL+GG   
Sbjct:    1 MNLEPTEEQRQIVATVRRFVREEIVPLEAKLDPDASELPPEDFARLSRMVREMGFWGLDIPAEYGGAGVDLVTRTLMAVEMSQHRAGLYAPCYGVFGSAGLAQLYEATPEQKERYLYPMLRGEKRGFFGLTEPSGGSDPARAIRTRAVRDGDHWVINGSKVFISGADKAHFGLVFARTDPDKGRGGITCFIVDTDTKGFHVRRVVHTLRSSNYATELQFEDLRVPHANVLGEVGRGFAIANDRLTRQRIPYAAACIGVAVKAQELAIEYAKQRETFGAPLATRQAVQWMIVDNEIDIRTSLWLTLAAAHKAERGEPFRMEAGMAKLVATEAGGRVVDRAMQIHGGYGMTKDLPFERWYREMRIRRVGEGPNEVQRHLIARDLLGGGLR 388          
BLAST of mRNA_P-wetherbeei_contig1701.2.1 vs. uniprot
Match: A0A523M4U6_9GAMM (Cyclohexanecarboxyl-CoA dehydrogenase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A523M4U6_9GAMM)

HSP 1 Score: 597 bits (1540), Expect = 4.490e-213
Identity = 289/373 (77.48%), Postives = 326/373 (87.40%), Query Frame = 1
Query:   46 IRKFVREEICPLEDGLDPDAGDLEPHDKARLTAKIKDMGFYGLGIPAEYGGPDIDTTTMTLMAIEMSQHRAGLYNPCYGVFGGAGLAQLFEATEEQKEKYLYPTLSGEMTTFFGLTEPSGGSDPARAIQTRAVRDGDDWVLNGSKIFISGADRADFGLLFARTDTDKGRGGVTCFIVETKTPGFYVRRVVHTLRSTRYATEIQIENMRVPHKNVLGEVNKGFAIANDRLSRQRIPYAAGCVGVAIKAQEMAIDYCKVRSTFGAPLATRQSIQWMIVDNELDIRTARYLCLDAAQKADRGEEFRTEAAMAKLVGSEAGGRVVDRAMQIFGGYGMTKDFPFERWYREMRIRRVGEGPSEVQRLVIARDLIGGAFH 1164
            +R+FVR+EI PLE  LDPDA  L P D  RL AK K+MG YGLGIP E+GGPD+D  T TL+AIEM+QHRAGLY PCYGVFGGAGLAQLFEA + QKEKYLYPTL GEM  FFGLTE SGGSDPARAIQT+AVRDGDDW++NGSKIFISGADRAD+GL+FARTD +KGR G+TCFIVET  PGF+VRRVVHTLRS  YATE+Q E++RVPH NVLGEVNKGFAIANDRLSRQRIPYAAGC+GVA+KA E+A++Y   R TFGA L++RQSIQWM+VDNE+DI+TA +L L+AA KADRGE FR EAAMAKLV SEAGGRVVDR+MQIFGGYG+TKDFPFERWYREMRIRR+GEGPSEVQR VIARDL+G +  
Sbjct:    2 VRRFVRDEILPLELDLDPDADQLAPADSQRLIAKTKEMGLYGLGIPPEFGGPDVDLVTRTLLAIEMAQHRAGLYAPCYGVFGGAGLAQLFEADDAQKEKYLYPTLRGEMRGFFGLTESSGGSDPARAIQTKAVRDGDDWIINGSKIFISGADRADYGLVFARTDPEKGRNGITCFIVETSWPGFHVRRVVHTLRSAHYATELQFEDLRVPHANVLGEVNKGFAIANDRLSRQRIPYAAGCIGVAVKANELALEYAGQRETFGALLSSRQSIQWMLVDNEIDIKTATWLTLEAAAKADRGEPFRKEAAMAKLVASEAGGRVVDRSMQIFGGYGVTKDFPFERWYREMRIRRIGEGPSEVQRHVIARDLLGASLR 374          
BLAST of mRNA_P-wetherbeei_contig1701.2.1 vs. uniprot
Match: A0A2E4URW1_9GAMM (Cyclohexanecarboxyl-CoA dehydrogenase n=2 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E4URW1_9GAMM)

HSP 1 Score: 596 bits (1537), Expect = 2.150e-212
Identity = 286/388 (73.71%), Postives = 332/388 (85.57%), Query Frame = 1
Query:    1 MDYQLTDEQRIIVDTIRKFVREEICPLEDGLDPDAGDLEPHDKARLTAKIKDMGFYGLGIPAEYGGPDIDTTTMTLMAIEMSQHRAGLYNPCYGVFGGAGLAQLFEATEEQKEKYLYPTLSGEMTTFFGLTEPSGGSDPARAIQTRAVRDGDDWVLNGSKIFISGADRADFGLLFARTDTDKGRGGVTCFIVETKTPGFYVRRVVHTLRSTRYATEIQIENMRVPHKNVLGEVNKGFAIANDRLSRQRIPYAAGCVGVAIKAQEMAIDYCKVRSTFGAPLATRQSIQWMIVDNELDIRTARYLCLDAAQKADRGEEFRTEAAMAKLVGSEAGGRVVDRAMQIFGGYGMTKDFPFERWYREMRIRRVGEGPSEVQRLVIARDLIGGAFH 1164
            MD+QLT+EQ++I DT+R+FVREEI PLE  LDPDA +LE  D+ RL    K+MG YGL IP E+GGPDID  T TL+A EMSQHRAGLY PCY VFGGAGLAQLFEA++EQKEKYLYPTL GE   FFGLTEPSGGSDPARAIQTRA +DGDDW++NG KIFISGADRADFGL+FART  DKGRGGVTCFIVET+ PGF+VRRVVHTLRS+ YATE+Q +++RVP +N+LGE+NKGFAIANDRLSRQR PYAA C+GVA+KA E+A+DY ++R TFGAPLA+RQSIQWM+VDNE+DI+ + ++ L+AA  A RGE FR +AAMAKLV +EA  RVVDR MQI GGYG+TKDFPFERWYREMRIRRVGEGPSEVQR +IARDL G +  
Sbjct:    1 MDFQLTEEQKLITDTVRRFVREEILPLEQDLDPDASELEXADRERLIGITKEMGLYGLDIPVEFGGPDIDIVTRTLLAXEMSQHRAGLYEPCYRVFGGAGLAQLFEASDEQKEKYLYPTLRGEKRGFFGLTEPSGGSDPARAIQTRAXQDGDDWIINGGKIFISGADRADFGLVFARTSPDKGRGGVTCFIVETEWPGFHVRRVVHTLRSSHYATELQFQDLRVPARNILGELNKGFAIANDRLSRQRXPYAASCIGVAVKAHELALDYAQIRETFGAPLASRQSIQWMLVDNEIDIKQSTWITLEAADLARRGEPFRKQAAMAKLVATEASSRVVDRXMQIHGGYGVTKDFPFERWYREMRIRRVGEGPSEVQRHIIARDLXGASXR 388          
BLAST of mRNA_P-wetherbeei_contig1701.2.1 vs. uniprot
Match: A0A2E5MAB5_9GAMM (Cyclohexanecarboxyl-CoA dehydrogenase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E5MAB5_9GAMM)

HSP 1 Score: 596 bits (1537), Expect = 2.580e-212
Identity = 285/388 (73.45%), Postives = 331/388 (85.31%), Query Frame = 1
Query:    1 MDYQLTDEQRIIVDTIRKFVREEICPLEDGLDPDAGDLEPHDKARLTAKIKDMGFYGLGIPAEYGGPDIDTTTMTLMAIEMSQHRAGLYNPCYGVFGGAGLAQLFEATEEQKEKYLYPTLSGEMTTFFGLTEPSGGSDPARAIQTRAVRDGDDWVLNGSKIFISGADRADFGLLFARTDTDKGRGGVTCFIVETKTPGFYVRRVVHTLRSTRYATEIQIENMRVPHKNVLGEVNKGFAIANDRLSRQRIPYAAGCVGVAIKAQEMAIDYCKVRSTFGAPLATRQSIQWMIVDNELDIRTARYLCLDAAQKADRGEEFRTEAAMAKLVGSEAGGRVVDRAMQIFGGYGMTKDFPFERWYREMRIRRVGEGPSEVQRLVIARDLIGGAFH 1164
            +D   T+EQ ++V+T+R+FVREEI PLE  LDPDA +L P D  RL AK + MG YG+GIP EYGGP+ID  T TL+AIEMSQHRAGLY PCYGVFGGAGLAQLFEATE+QKE+YLYPTL GE   FFGLTEP+GGSDPARAI+T+AVR GDDW++NG KIFISGADRAD+GL+FART+ DKGR GVTCFIV+T  PGF V RVVHTLRS  YATE+  E+M VPH NVLGEVNKGFAIANDRL+RQRIPYAAGC+GVAIKA E+A+ Y   R TFGAPL+TRQ++QWM+VDNE+DIR AR+L L+AA +ADRGE FR EAAMAKLV SEAG +VVDR +Q+FGGYG+TKDFPFERWYREMRIRR+GEGPSEVQR +IAR+L+G +  
Sbjct:    6 VDLTPTEEQSLLVETVRRFVREEILPLELDLDPDADELHPDDHERLVAKTRSMGLYGMGIPPEYGGPEIDLVTRTLLAIEMSQHRAGLYAPCYGVFGGAGLAQLFEATEDQKERYLYPTLRGEKRGFFGLTEPTGGSDPARAIRTKAVRSGDDWIINGGKIFISGADRADYGLVFARTEPDKGRNGVTCFIVDTDAPGFRVNRVVHTLRSANYATELSFEDMSVPHANVLGEVNKGFAIANDRLTRQRIPYAAGCIGVAIKAHELALGYVPQRETFGAPLSTRQAVQWMLVDNEIDIRNARWLTLEAAHRADRGEPFRKEAAMAKLVASEAGSKVVDRCIQMFGGYGVTKDFPFERWYREMRIRRIGEGPSEVQRHIIARELLGASLR 393          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1701.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3C0TSX8_9PROT2.470e-26490.98Cyclohexanecarboxyl-CoA dehydrogenase n=1 Tax=Alph... [more]
A0A353LQQ3_9PROT2.600e-24182.73Cyclohexanecarboxyl-CoA dehydrogenase n=3 Tax=Alph... [more]
A0A496X4V6_9GAMM3.000e-22676.29Cyclohexanecarboxyl-CoA dehydrogenase n=7 Tax=Gamm... [more]
A0A2A5A0Z3_9GAMM8.590e-22677.32Cyclohexanecarboxyl-CoA dehydrogenase n=2 Tax=Gamm... [more]
A0A3A0FGR1_9BACT1.500e-21977.32Cyclohexanecarboxyl-CoA dehydrogenase n=2 Tax=Bact... [more]
A0A6N6VMT6_9HYPH1.750e-21874.94Cyclohexanecarboxyl-CoA dehydrogenase n=5 Tax=Bact... [more]
A0A7C2QQF5_9HYPH2.620e-21375.00Cyclohexanecarboxyl-CoA dehydrogenase n=1 Tax=Hyph... [more]
A0A523M4U6_9GAMM4.490e-21377.48Cyclohexanecarboxyl-CoA dehydrogenase n=1 Tax=Gamm... [more]
A0A2E4URW1_9GAMM2.150e-21273.71Cyclohexanecarboxyl-CoA dehydrogenase n=2 Tax=Gamm... [more]
A0A2E5MAB5_9GAMM2.580e-21273.45Cyclohexanecarboxyl-CoA dehydrogenase n=1 Tax=Gamm... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1701contigP-wetherbeei_contig1701:1291..2457 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1205680.CAKO01000030_gene4821
PFAMsAcyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
Model size1167
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.66e-197
EggNOG OGsCOG1960@1|root,COG1960@2|Bacteria,1MUDR@1224|Proteobacteria,2TQKE@28211|Alphaproteobacteria
Descriptionacyl-CoA dehydrogenase
Cds size1167
COG categoryI
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186104.9845214-CDS-P-wetherbeei_contig1701:1290..24571683186104.9845214-CDS-P-wetherbeei_contig1701:1290..2457Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1701 1291..2457 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1701.2.1prot_P-wetherbeei_contig1701.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1701 1291..2457 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1701.2.1

>prot_P-wetherbeei_contig1701.2.1 ID=prot_P-wetherbeei_contig1701.2.1|Name=mRNA_P-wetherbeei_contig1701.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=389bp
MDYQLTDEQRIIVDTIRKFVREEICPLEDGLDPDAGDLEPHDKARLTAKI
KDMGFYGLGIPAEYGGPDIDTTTMTLMAIEMSQHRAGLYNPCYGVFGGAG
LAQLFEATEEQKEKYLYPTLSGEMTTFFGLTEPSGGSDPARAIQTRAVRD
GDDWVLNGSKIFISGADRADFGLLFARTDTDKGRGGVTCFIVETKTPGFY
VRRVVHTLRSTRYATEIQIENMRVPHKNVLGEVNKGFAIANDRLSRQRIP
YAAGCVGVAIKAQEMAIDYCKVRSTFGAPLATRQSIQWMIVDNELDIRTA
RYLCLDAAQKADRGEEFRTEAAMAKLVGSEAGGRVVDRAMQIFGGYGMTK
DFPFERWYREMRIRRVGEGPSEVQRLVIARDLIGGAFH*
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mRNA from alignment at P-wetherbeei_contig1701:1291..2457+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1701.2.1 ID=mRNA_P-wetherbeei_contig1701.2.1|Name=mRNA_P-wetherbeei_contig1701.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1167bp|location=Sequence derived from alignment at P-wetherbeei_contig1701:1291..2457+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGATTATCAATTAACGGATGAACAGCGGATCATTGTAGATACCATCCG CAAATTTGTGCGCGAGGAAATTTGCCCGCTTGAAGACGGGCTGGACCCGG ATGCGGGCGATCTGGAACCGCATGACAAGGCCAGGCTGACTGCGAAAATA AAGGATATGGGGTTTTACGGACTTGGCATTCCGGCGGAATATGGCGGCCC GGATATTGACACCACCACCATGACCCTGATGGCGATCGAAATGTCGCAGC ATCGCGCCGGGCTCTATAATCCCTGCTACGGCGTGTTTGGCGGCGCGGGG CTGGCGCAGCTGTTCGAGGCAACAGAAGAACAGAAGGAAAAATATCTCTA CCCTACCTTAAGCGGCGAAATGACCACGTTCTTCGGGCTGACGGAACCAT CCGGCGGGTCCGATCCCGCCCGCGCCATTCAGACCCGCGCCGTGCGTGAT GGCGATGACTGGGTTTTAAACGGATCAAAAATTTTTATCAGCGGCGCGGA TCGCGCCGATTTCGGCCTGCTGTTCGCACGCACCGATACGGACAAGGGAC GCGGCGGGGTTACCTGCTTTATCGTCGAGACAAAGACACCGGGTTTTTAT GTGCGGCGGGTTGTGCACACCCTGCGGTCCACCCGCTATGCCACGGAAAT ACAGATCGAAAATATGCGGGTGCCGCACAAAAATGTGCTGGGCGAAGTCA ATAAGGGATTTGCCATCGCCAATGACCGGCTGAGCCGGCAGCGCATTCCT TACGCGGCAGGCTGTGTCGGGGTCGCCATCAAGGCGCAGGAAATGGCCAT CGATTATTGCAAGGTCCGCAGCACTTTTGGCGCGCCCCTGGCCACCCGCC AGTCCATTCAATGGATGATTGTGGATAATGAACTGGACATTCGCACCGCC CGTTATCTGTGCCTGGATGCGGCGCAGAAAGCCGACCGGGGCGAAGAATT TCGCACCGAGGCAGCGATGGCGAAACTCGTTGGCAGCGAAGCAGGCGGCC GGGTGGTGGACCGGGCCATGCAAATTTTTGGCGGCTATGGCATGACCAAG GATTTTCCCTTTGAGCGCTGGTACCGCGAAATGCGCATCCGCCGGGTTGG CGAAGGCCCCAGCGAAGTGCAGCGGCTGGTCATTGCCCGCGATCTGATCG GCGGTGCGTTTCATTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1701:1291..2457+

>mRNA_P-wetherbeei_contig1701.2.1 ID=mRNA_P-wetherbeei_contig1701.2.1|Name=mRNA_P-wetherbeei_contig1701.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1167bp|location=Sequence derived from alignment at P-wetherbeei_contig1701:1291..2457+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGATTATCAATTAACGGATGAACAGCGGATCATTGTAGATACCATCCG
CAAATTTGTGCGCGAGGAAATTTGCCCGCTTGAAGACGGGCTGGACCCGG
ATGCGGGCGATCTGGAACCGCATGACAAGGCCAGGCTGACTGCGAAAATA
AAGGATATGGGGTTTTACGGACTTGGCATTCCGGCGGAATATGGCGGCCC
GGATATTGACACCACCACCATGACCCTGATGGCGATCGAAATGTCGCAGC
ATCGCGCCGGGCTCTATAATCCCTGCTACGGCGTGTTTGGCGGCGCGGGG
CTGGCGCAGCTGTTCGAGGCAACAGAAGAACAGAAGGAAAAATATCTCTA
CCCTACCTTAAGCGGCGAAATGACCACGTTCTTCGGGCTGACGGAACCAT
CCGGCGGGTCCGATCCCGCCCGCGCCATTCAGACCCGCGCCGTGCGTGAT
GGCGATGACTGGGTTTTAAACGGATCAAAAATTTTTATCAGCGGCGCGGA
TCGCGCCGATTTCGGCCTGCTGTTCGCACGCACCGATACGGACAAGGGAC
GCGGCGGGGTTACCTGCTTTATCGTCGAGACAAAGACACCGGGTTTTTAT
GTGCGGCGGGTTGTGCACACCCTGCGGTCCACCCGCTATGCCACGGAAAT
ACAGATCGAAAATATGCGGGTGCCGCACAAAAATGTGCTGGGCGAAGTCA
ATAAGGGATTTGCCATCGCCAATGACCGGCTGAGCCGGCAGCGCATTCCT
TACGCGGCAGGCTGTGTCGGGGTCGCCATCAAGGCGCAGGAAATGGCCAT
CGATTATTGCAAGGTCCGCAGCACTTTTGGCGCGCCCCTGGCCACCCGCC
AGTCCATTCAATGGATGATTGTGGATAATGAACTGGACATTCGCACCGCC
CGTTATCTGTGCCTGGATGCGGCGCAGAAAGCCGACCGGGGCGAAGAATT
TCGCACCGAGGCAGCGATGGCGAAACTCGTTGGCAGCGAAGCAGGCGGCC
GGGTGGTGGACCGGGCCATGCAAATTTTTGGCGGCTATGGCATGACCAAG
GATTTTCCCTTTGAGCGCTGGTACCGCGAAATGCGCATCCGCCGGGTTGG
CGAAGGCCCCAGCGAAGTGCAGCGGCTGGTCATTGCCCGCGATCTGATCG
GCGGTGCGTTTCATTGA
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