mRNA_P-wetherbeei_contig16996.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig16996.2.1 vs. uniprot
Match: A0A6H5JYJ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYJ7_9PHAE) HSP 1 Score: 100 bits (249), Expect = 3.420e-24 Identity = 52/109 (47.71%), Postives = 69/109 (63.30%), Query Frame = 1
Query: 1 LKLHVSRLEAQGLVPLWEERLQNDAELKKQMQECHDRYADERWAMLTEKGRELVAAKGWEGAIGRGAGVAGIRYPGAIKCLHTHYGHYLGCSGAENLVGRWVQEALDAG 327
LK VS+LE QGL+ WE RLQ D + M+ H YA+ERW++L+ + + + +GWE + G VAGI P IKCLHTH+ H+L N+VG+W QEALDAG
Sbjct: 93 LKAAVSQLENQGLILEWERRLQADPGIMADMEAAHKSYAEERWSLLSAEDVDTIKRQGWEKSFSNG--VAGIVQPRHIKCLHTHFAHFLATG--RNVVGKWTQEALDAG 197
BLAST of mRNA_P-wetherbeei_contig16996.2.1 vs. uniprot
Match: A0A1W0AC20_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0AC20_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 7.550e-23 Identity = 50/106 (47.17%), Postives = 69/106 (65.09%), Query Frame = 1
Query: 1 LKLHVSRLEAQGLVPLWEERLQNDAELKKQMQECHDRYADERWAMLTEKGRELVAAKGWEGAIGRGAGVAGIRYPGAIKCLHTHYGHYLGCSGAENLVGRWVQEAL 318
LK VS LE G V ++ +RL + + K+M++ H YAD RW++LT + +++ AK WE AI + G+AGIR ++KCLHTHY HYL NLVG+WV EAL
Sbjct: 109 LKEKVSILEGMGFVEIFTDRLVANPQYAKEMEDAHQSYADFRWSLLTPRDIQVIKAKQWEHAI-KDVGIAGIRNRASVKCLHTHYAHYLATK--SNLVGKWVHEAL 211
BLAST of mRNA_P-wetherbeei_contig16996.2.1 vs. uniprot
Match: A0A1V9Z5R7_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z5R7_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 1.040e-22 Identity = 50/106 (47.17%), Postives = 69/106 (65.09%), Query Frame = 1
Query: 1 LKLHVSRLEAQGLVPLWEERLQNDAELKKQMQECHDRYADERWAMLTEKGRELVAAKGWEGAIGRGAGVAGIRYPGAIKCLHTHYGHYLGCSGAENLVGRWVQEAL 318
LK VS LE G V ++ +RL+ +A ++ M++ H YAD RW +LT + +VA+K WE A+ + G+AGIR ++KCLHTHY HYL +NLVG WV EAL
Sbjct: 110 LKEKVSVLEGMGYVEIFTDRLEANATYRQAMEDAHKNYADLRWGLLTSRDIAIVASKHWERAL-KDVGIAGIRNRASVKCLHTHYAHYLATG--DNLVGAWVHEAL 212
BLAST of mRNA_P-wetherbeei_contig16996.2.1 vs. uniprot
Match: A0A6G0NZP4_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6G0NZP4_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 5.430e-22 Identity = 53/110 (48.18%), Postives = 67/110 (60.91%), Query Frame = 1
Query: 1 LKLHVSRLEAQGLVPLWEERLQNDAELKKQMQECHDRYADERWAMLTEKGRELVAAKGWEGAIGRGAGVAGIRYPGAIKCLHTHYGHYLGCSGAENLVGRWVQEALDAGA 330
LK VS LE Q LV + RL D K++M++ H YA++RW M+T + ELV + WE + R G+AGIR +KCLHTHY HYL NLVG WVQE LD+ A
Sbjct: 103 LKARVSALEDQQLVLALQRRLDADDPAKQKMKQSHREYAEQRWLMMTPRDLELVKGRRWEFFL-RDVGIAGIREYTNVKCLHTHYAHYLATG--NNLVGEWVQELLDSAA 209
BLAST of mRNA_P-wetherbeei_contig16996.2.1 vs. uniprot
Match: A0A067CIQ7_SAPPC (Uncharacterized protein (Fragment) n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CIQ7_SAPPC) HSP 1 Score: 93.2 bits (230), Expect = 3.290e-21 Identity = 52/107 (48.60%), Postives = 66/107 (61.68%), Query Frame = 1
Query: 1 LKLHVSRLEAQGLVPLWEERLQNDAELKKQMQECHDRYADERWAMLTEKGRELVAAKGWEGAIGRGAGVAGIRYPGAIKCLHTHYGHYLGCSGAENLVGRWVQEALD 321
LK VS LE G V ++ ERL ++ E + M H YAD R+ +LT + +V AK WE A+ + G+AGIR ++KCLHTHY HYL NLVG WVQEALD
Sbjct: 111 LKEKVSVLEGMGFVEVFTERLTSNPEYLEAMAMAHQSYADLRYDLLTPRDEAIVEAKRWERAL-KHVGIAGIRNRASVKCLHTHYAHYLATK--NNLVGAWVQEALD 214
BLAST of mRNA_P-wetherbeei_contig16996.2.1 vs. uniprot
Match: G4ZX89_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZX89_PHYSP) HSP 1 Score: 92.8 bits (229), Expect = 3.820e-21 Identity = 52/107 (48.60%), Postives = 63/107 (58.88%), Query Frame = 1
Query: 1 LKLHVSRLEAQGLVPLWEERLQNDAELKKQMQECHDRYADERWAMLTEKGRELVAAKGWEGAIGRGAGVAGIRYPGAIKCLHTHYGHYLGCSGAENLVGRWVQEALD 321
LK VS LE Q V + RL D K++M+E H YA++RW M+T ELV + WE + R G+AGIR +KCLHTHY HYL NLVG WVQE LD
Sbjct: 98 LKARVSALEDQQFVLTLQHRLDADEAAKQRMKESHREYAEQRWRMMTAHDLELVKGRRWEFFL-RDVGIAGIREYTNVKCLHTHYAHYLATG--NNLVGEWVQELLD 201
BLAST of mRNA_P-wetherbeei_contig16996.2.1 vs. uniprot
Match: H3HCG6_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HCG6_PHYRM) HSP 1 Score: 92.0 bits (227), Expect = 4.540e-21 Identity = 52/110 (47.27%), Postives = 65/110 (59.09%), Query Frame = 1
Query: 1 LKLHVSRLEAQGLVPLWEERLQNDAELKKQMQECHDRYADERWAMLTEKGRELVAAKGWEGAIGRGAGVAGIRYPGAIKCLHTHYGHYLGCSGAENLVGRWVQEALDAGA 330
LK VS LE Q V + RL D K++M + H YA++RW M+T RELV + WE + R G+AGIR +KCLHTHY HYL NLVG WVQE L++ A
Sbjct: 75 LKARVSTLEDQQYVLTLQHRLDADEAAKEKMAQSHREYAEQRWRMMTPHDRELVKGRRWEFFL-RDVGIAGIREFTNVKCLHTHYAHYLATG--NNLVGEWVQELLNSSA 181
BLAST of mRNA_P-wetherbeei_contig16996.2.1 vs. uniprot
Match: A0A3R7HVX3_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7HVX3_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 1.090e-20 Identity = 51/110 (46.36%), Postives = 66/110 (60.00%), Query Frame = 1
Query: 1 LKLHVSRLEAQGLVPLWEERLQNDAELKKQMQECHDRYADERWAMLTEKGRELVAAKGWEGAIGRGAGVAGIRYPGAIKCLHTHYGHYLGCSGAENLVGRWVQEALDAGA 330
LK VS LE + V + RL+ D K++M + H YA++RW MLTE +V +GWE + R G+AGIR +KCLHTHY HYL NL+G WVQE LD+ A
Sbjct: 99 LKARVSTLEDEQYVMELQRRLEADEASKEKMAQNHREYAEQRWRMLTEHDLGVVKGRGWEFVL-RDVGIAGIRDFTNVKCLHTHYAHYLATG--NNLIGEWVQELLDSAA 205
BLAST of mRNA_P-wetherbeei_contig16996.2.1 vs. uniprot
Match: A0A225VD34_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VD34_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 3.560e-20 Identity = 49/108 (45.37%), Postives = 63/108 (58.33%), Query Frame = 1
Query: 1 LKLHVSRLEAQGLVPLWEERLQNDAELKKQMQECHDRYADERWAMLTEKGRELVAAKGWEGAIGRGAGVAGIRYPGAIKCLHTHYGHYLGCSGAENLVGRWVQEALDA 324
LK VS LE Q V + RL D K++M + H YA++RW M+T ELV + WE + R G+AGIR ++KCLHTHY HYL N +G WVQE LD+
Sbjct: 93 LKARVSTLEDQQYVLTLQHRLDTDEAAKEKMAQSHREYAEQRWKMMTPHDLELVEGRRWEFVL-RDVGIAGIRDFTSVKCLHTHYAHYLATG--NNQIGEWVQELLDS 197
BLAST of mRNA_P-wetherbeei_contig16996.2.1 vs. uniprot
Match: A0A484EA83_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EA83_BRELC) HSP 1 Score: 89.4 bits (220), Expect = 8.200e-20 Identity = 50/107 (46.73%), Postives = 63/107 (58.88%), Query Frame = 1
Query: 1 LKLHVSRLEAQGLVPLWEERLQNDAELKKQMQECHDRYADERWAMLTEKGRELVAAKGWEGAIGRGAGVAGIRYPGAIKCLHTHYGHYLGCSGAENLVGRWVQEALD 321
LK VS LE Q V + RL D K++M + H YA++RW MLT R+L+ + WE + R G+AGIR +KCLHTHY HYL S N +G WVQE LD
Sbjct: 96 LKAKVSTLEDQHYVLTLQHRLDTDQVAKEKMVQSHREYAEQRWQMLTRHDRDLLKRRQWEFFL-RDVGIAGIRDYTNVKCLHTHYAHYL--STGNNQIGEWVQELLD 199 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16996.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig16996.2.1 >prot_P-wetherbeei_contig16996.2.1 ID=prot_P-wetherbeei_contig16996.2.1|Name=mRNA_P-wetherbeei_contig16996.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=110bp LKLHVSRLEAQGLVPLWEERLQNDAELKKQMQECHDRYADERWAMLTEKGback to top mRNA from alignment at P-wetherbeei_contig16996:498..1455- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig16996.2.1 ID=mRNA_P-wetherbeei_contig16996.2.1|Name=mRNA_P-wetherbeei_contig16996.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=958bp|location=Sequence derived from alignment at P-wetherbeei_contig16996:498..1455- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig16996:498..1455- >mRNA_P-wetherbeei_contig16996.2.1 ID=mRNA_P-wetherbeei_contig16996.2.1|Name=mRNA_P-wetherbeei_contig16996.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=330bp|location=Sequence derived from alignment at P-wetherbeei_contig16996:498..1455- (Phaeothamnion wetherbeei SAG_119_79)back to top |