mRNA_P-wetherbeei_contig1695.5.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1695.5.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI) HSP 1 Score: 160 bits (406), Expect = 5.220e-38 Identity = 114/331 (34.44%), Postives = 157/331 (47.43%), Query Frame = 1
Query: 1579 NDWEVCRHAMLILEPFMEVQKSCEGSTYVTGSLVIPMIHSLRGPMIDYIQHTETFLASAMHNGANSAVPGAMLPVCREMLRVFNDKWGDGTNICTYGEGPRRQPKGFTKVQVLATALDPRTRSLVGVPSHEKETVWALVTREVAELMVAEHTASVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQVRRRHAGFLAQMAAEXXXEGSNSMSCYGETDAAVASGRFELVAID--EVKAFQRMPRLSMQD----HNGE---WNDPLLWWRRHHLEFPNIAKLARCVLCVPATSAPSERLFSSAGLTVTQRRGRLTDHSVETLIFL 2544
DWEV R IL PFM+ QK EG+ YVTGS+ I + LR + I + + A+ A+ P ++ F ++WGDG+NI Y EG RRQP+GF + QV ATALDPR + L G+ E VW V ++ + +H A R R + F A A XXX + R +LVAI EV AF+ P + + D + G+ +N+PL WR+ LE+P +A LAR VL +P++ A SER+FS+AGLTVT R RL D +VE L++L
Sbjct: 232 TDWEVLRLIEPILRPFMKAQKDLEGAQYVTGSMTIGKMAELREGLEAAITDLKAVAQQGLKETTQKAME-AVRPDAEALMADFTNRWGDGSNILEYREGKRRQPQGFKRKQVYATALDPRAKHLYGIQQREHAGVWRAVASAAVDIALGKHAGDKAPASAEKPASDPVQTQPAPLGGGQGASK------------RPRMSAFEAAAAXXXXXXXXXXXXXSADEK------REQLVAIVDMEVSAFKAAPGIRVWDMQKTNTGDKKVFNNPLDRWRKKQLEYPLLAALARRVLAIPSSQAQSERVFSTAGLTVTPTRSRLLDENVELLVYL 543
BLAST of mRNA_P-wetherbeei_contig1695.5.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE) HSP 1 Score: 129 bits (324), Expect = 6.300e-27 Identity = 141/349 (40.40%), Postives = 186/349 (53.30%), Query Frame = 1
Query: 1579 NDWEVCRHAMLILEPFMEVQKSCEGSTYVTGSLVIPMIHSLRGPMIDYIQHTETFLASAMHNGANSAVPGAMLPV--CREMLRV-FNDKWGDGTNICTYGEGPRRQPKGFTKVQVLATALDPRTRSLVGVPSHEKETVWALVTREVAELMV-AEHTASVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQVRRRHAGFLAQMAAEXXXEGSNSMS--------------CYGETD-AAVASG-----RFELVAIDEVKAFQRMPRLSMQ-DHNGEW--NDPLLWWRRHHLEFPNIAKLARCVLCVPATSAPSERLFSSAGLTVTQRRGRLTDHSVETLIFL 2544
DWEV + +L+PFM QK E S VT LV P I L+ + + ++ + A S V A V C + L+ + +WGD T++ Y EGPRRQP+GF K QVLATAL PR++SL G+ E VW E ++ + A+ T XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ++ E + +G+ +A AS + E + EV AF+ P L++ + G+ PL WWR E+P +A LAR VLC+PA A SER+FSSAGL VT+ R R+ +V ++FL
Sbjct: 197 KDWEVLQLVESLLKPFMTAQKHLEASKEVTVRLVSPYIADLQDGLDEAVERLQAHSCPA-----ESIVAEAKKDVILCAQALQTDLSRRWGDRTDVLVYTEGPRRQPRGFKKEQVLATALGPRSKSLYGIEETEHSDVWDAGANEAVKVAIEAKATEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQSAGASSSPIPVEPAXXXXXXXXXXXXXXXXXXAHGDKQQSANASSSPLRRQMESIISREVDAFKITPGLAVSWEEKGQEVRGKPLEWWRVKAREYPKLASLARRVLCIPAFQAQSERVFSSAGLVVTKTRARMDPENVGLMVFL 540
BLAST of mRNA_P-wetherbeei_contig1695.5.1 vs. uniprot
Match: A0A6H5KUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY5_9PHAE) HSP 1 Score: 122 bits (305), Expect = 3.020e-25 Identity = 65/159 (40.88%), Postives = 90/159 (56.60%), Query Frame = 3
Query: 654 VSSPEFKTMVSVLEKRAAMPSSKMLFDYLVRYKLSLHGDIAAMTKGQKEAVTVDGWTSRAGDQYFSLTRHFINEQWELTSLALDCVKHVGSTCASDLVRIVEDLVERANVTA--INLTTDCEPSMVAAGR-----ETKFQHSGCLAHRLESVTGIFFDG 1109
V PEF +VS L K+A P + L + + K +L ++A M + A+T DGWTSR+ + Y SLT +I+ W+L L+L+C KH GST DL R + ++ER +T TDCEPSMV AGR + +H GC HR+ES T F+G
Sbjct: 29 VEYPEFHAVVSGLNKKARAPIRRALVEKMREIKKNLESEVALMLDDEYVAITTDGWTSRSNESYMSLTVAYIDVGWQLHHLSLNCTKHTGSTHGEDLAREITSMIERHGLTGRVTACVTDCEPSMVKAGRLLEVGGSNLEHIGCSNHRMESTTSSVFNG 187
BLAST of mRNA_P-wetherbeei_contig1695.5.1 vs. uniprot
Match: A0A6H5JWI1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI1_9PHAE) HSP 1 Score: 116 bits (291), Expect = 5.920e-25 Identity = 114/244 (46.72%), Postives = 135/244 (55.33%), Query Frame = 1
Query: 1825 FNDKWGDGTNICTYGEGPRRQPKGFTKVQVLATALDPRTRSLVGVPSHEKETVWALVTREVAELMVAEHTASVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQVRRRHAGFLAQMAAEXXXEGSNSMSCYGETDAAVASGRFELVAIDEVKAFQRMPRLSMQDHNGE----WNDPLLWWRRHHLEFPNIAKLARCVLCVPATSAPSERLFSSAGLTVTQRRGRLTDHSVETLIFL 2544
F ++WGDG NI Y EG RRQP GF VQVLATALDPRT+ L GV EK VW LV E ++ V E S XXXXXXXXXXXXXXXXXXXXXXXXXX A + EG++S T +S R EL A F+ + M + + E + DPL WWR +FP++A LAR VL +PAT A SERLFS AG VT+ R L +VE L+ L
Sbjct: 51 FINRWGDGRNILIYKEGRRRQPGGFKPVQVLATALDPRTKILYGVDEDEKADVWKLVEEEAVKIAV-ETRNSENSQRASSQQGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQAVGGARTPQLDEGADSSFVRLIT----SSVRVELTA------FKVSTGIKMYEEDKEGAKVYLDPLDWWRVRCADFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTVELLVLL 283
BLAST of mRNA_P-wetherbeei_contig1695.5.1 vs. uniprot
Match: A0A6H5JJV8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV8_9PHAE) HSP 1 Score: 115 bits (288), Expect = 2.430e-23 Identity = 62/170 (36.47%), Postives = 93/170 (54.71%), Query Frame = 3
Query: 651 IVSSPEFKTMVSVLEKRAAMPSSKMLFDYLVRYKLSLHGDIAAMTKGQKEAVTVDGWTSRAGDQYFSLTRHFINEQWELTSLALDCVKHVGSTCASDLVRIVEDLVERANVTA--INLTTDCEPSMVAAGRETK----FQHSGCLAHRLESVTGIFFDGPGEAGGVSVVK 1142
+V + F MV L+ RA +P ++ + L K L ++ G+ AVT DGWTS + D Y T +I+ ++L +L ++C KH G T DLV V+ ++ R +T+ + TTDCEPSMV AGR + H GC HRLES+T F GPG + +++ +
Sbjct: 1 MVENEHFIEMVRFLKSRATVPHKRLFLEKLRGMKKGLDQEVLGRLTGEHVAVTSDGWTSASNDTYMYFTCTYISSNFDLVALCVECKKHGGRTTGEDLVEAVKAMIARNGLTSRTVATTTDCEPSMVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALALAR 170
BLAST of mRNA_P-wetherbeei_contig1695.5.1 vs. uniprot
Match: A0A6H5KVI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI1_9PHAE) HSP 1 Score: 104 bits (259), Expect = 3.750e-20 Identity = 69/186 (37.10%), Postives = 93/186 (50.00%), Query Frame = 1
Query: 1480 RNSLVVDI*AKSAWHLKPALDLVTIDGFVLPTAN--DWEVCRHAMLILEPFMEVQKSCEGSTYVTGSLVIPMIHSLRGPMIDYIQHTETFLASAMHNGANSAVPGAMLPVCREMLRVFND---KWGDGTNICTYGEGPRRQPKGFTKVQVLATALDPRTRSLVGVPSHEKETVWALVTREVAELMV 2022
R +V D+ ++ W P ID + P N DWEV + +L PFM QK E S VT SLV I LR + + I+ + + A S V A + R + D +W DGT++ Y EGPRRQP+GF K QVLATALDPR++SL G+ E VW V E ++ +
Sbjct: 141 RKKVVQDV--ETRWWSTPR----EIDS-IPPLLNEKDWEVLQLVEPLLHPFMTAQKHLEASKGVTVSLVTAYIADLRDELDEAIERLQAYSCPA-----ESIVAEAKKDILRCAPALQTDLSRRWRDGTDVLVYTEGPRRQPRGFKKKQVLATALDPRSKSLYGIEETEHSDVWEAVANEAVKVAI 314
BLAST of mRNA_P-wetherbeei_contig1695.5.1 vs. uniprot
Match: UPI000811684C (zinc finger BED domain-containing protein 1-like n=1 Tax=Rhagoletis zephyria TaxID=28612 RepID=UPI000811684C) HSP 1 Score: 95.1 bits (235), Expect = 6.960e-18 Identity = 63/164 (38.41%), Postives = 89/164 (54.27%), Query Frame = 3
Query: 624 VVMQYQPLSIVSSPEFKTMVSVLEKRAAMPSSKMLFDYLV--RYKLSLHGDIAAMTKGQKEAVTVDGWTSRAGDQYFSLTRHFINEQWELTSLALD---CV----KHVGSTCASDLVRIVEDLVERANVTAINLTTDCEPSMVAAGRETKFQHSGCLAHRLESV 1088
VV +YQP SIV PEFK +++L +P+ K L L+ YK +L ++K +TVDGWTSRA D +FS+T H+I+E E T LA D CV +H G + L I ++ AN A+ + TD +M AA R+ ++H GC AH L +
Sbjct: 2 VVKEYQPFSIVEDPEFKRFINMLNPNYKLPTRKTLSTSLIPAAYKETLEAVKNRLSKAFAICLTVDGWTSRAHDSFFSVTAHYISESSERTFLASDLITCVSYADRHTGENIKNKLREICDEW-GIANKIAV-IVTDNAANMKAAVRDGGWRHWGCFAHTLNLI 163
BLAST of mRNA_P-wetherbeei_contig1695.5.1 vs. uniprot
Match: UPI000811541D (zinc finger BED domain-containing protein 6-like n=1 Tax=Rhagoletis zephyria TaxID=28612 RepID=UPI000811541D) HSP 1 Score: 92.0 bits (227), Expect = 1.180e-17 Identity = 61/164 (37.20%), Postives = 88/164 (53.66%), Query Frame = 3
Query: 624 VVMQYQPLSIVSSPEFKTMVSVLEKRAAMPSSKMLFDYLV--RYKLSLHGDIAAMTKGQKEAVTVDGWTSRAGDQYFSLTRHFINEQWELTSLALD---CV----KHVGSTCASDLVRIVEDLVERANVTAINLTTDCEPSMVAAGRETKFQHSGCLAHRLESV 1088
VV +YQP SIV PEFK +++L +P+ K L L+ YK +L ++K +TVDGWTSR D ++S+T H+I+E E T LA D CV +H G + L I ++ AN A+ + TD +M AA R+ ++H GC AH L +
Sbjct: 2 VVKEYQPFSIVEDPEFKRFINMLNPNYKLPTRKTLSTSLIPAAYKETLEAVKNRVSKAFAICLTVDGWTSRVHDSFYSVTAHYISESSERTFLASDLITCVSYADRHTGENIKNKLREICDEW-GIANKIAV-IVTDNAANMKAAVRDGGWRHWGCFAHTLNLI 163
BLAST of mRNA_P-wetherbeei_contig1695.5.1 vs. uniprot
Match: UPI00177D4E93 (zinc finger BED domain-containing protein 6-like n=1 Tax=Rhagoletis pomonella TaxID=28610 RepID=UPI00177D4E93) HSP 1 Score: 97.8 bits (242), Expect = 1.610e-17 Identity = 64/169 (37.87%), Postives = 92/169 (54.44%), Query Frame = 3
Query: 609 ELCRFVVMQYQPLSIVSSPEFKTMVSVLEKRAAMPSSKMLFDYLV--RYKLSLHGDIAAMTKGQKEAVTVDGWTSRAGDQYFSLTRHFINEQWELTSLALD---CV----KHVGSTCASDLVRIVEDLVERANVTAINLTTDCEPSMVAAGRETKFQHSGCLAHRLESV 1088
+L + VV +YQPL IV PEFK +++L +P+ K L L+ YK +L ++K +TVDGWTSRA D +FS+T H+I+E E T LA D CV +H G + L I ++ AN A+ + TD +M AA R+ ++H GC AH L +
Sbjct: 118 QLVKMVVKEYQPLCIVEDPEFKRFINMLNPNYKLPTRKTLSTSLIPAAYKETLEAVKNRLSKAFAICLTVDGWTSRAHDSFFSVTAHYISESSERTFLASDLITCVSYADRHTGENIKNKLREICDEC-GIANKIAV-IVTDNAANMKAAVRDGGWRHWGCFAHTLNLI 284
BLAST of mRNA_P-wetherbeei_contig1695.5.1 vs. uniprot
Match: A0A3P8QXP5_ASTCA (BED-type domain-containing protein n=3 Tax=Astatotilapia calliptera TaxID=8154 RepID=A0A3P8QXP5_ASTCA) HSP 1 Score: 93.2 bits (230), Expect = 7.130e-16 Identity = 76/282 (26.95%), Postives = 125/282 (44.33%), Query Frame = 3
Query: 333 KGTIICENCVADGMLDKAEVNYGSSKSTGKVKQHYKTHHSDIYEEGQKLVLRGAAEDDKGQDGEQQATLKRQKTEHADIRASFEVTAP---PWIEELCRFVVMQYQPLSIVSSPEFKTMVSVLEKRAAMPSSKMLFDYLV--RYKLSLHGDIAAMTKGQKEAVTVDGWTSRAGDQYFSLTRHFINEQWELTSLALDCVKHVGSTCASDLVRIVEDLVERANVTAIN--LTTDCEPSMVAAGRETKFQHSGCLAHRLESVTGIFFDGPGEAGGVSVVKLLSIF 1157
K +C+ C K EV + + T ++ H HH DI L+ + A K++ E A FE T+P + + F+ +P S+V + F+ +++ LE R +PS K L + ++ Y+ H A++ ++ A+T D WTSRA D Y ++T H I+++W L S L S A++L I+ +E +T N + TD +MV A T + H GC AH L + P A + V+ ++ F
Sbjct: 32 KSKAVCKMC-------KMEVKHCGN--TTNLRNHLTRHHPDI------LLAKTA-------------DTKQRSLEKA-FAVKFESTSPRAQKITQSVATFICKDIRPYSVVENDGFQNLINTLEPRYVLPSRKHLSEVVIPNMYEKVKHDVTASLKSAERVAITCDSWTSRATDNYLTITSHHIDQEWRLVSHVLQTRTTEASHTAANLSEIMFKAIEEWELTNKNPVIVTDNAANMVRAVEITGWLHIGCFAHTLNLASQAGLKVPAVAQLLGRVRRIASF 284 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1695.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1695.5.1 >prot_P-wetherbeei_contig1695.5.1 ID=prot_P-wetherbeei_contig1695.5.1|Name=mRNA_P-wetherbeei_contig1695.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=416bp MADADEGLQRNDNVIIDVEAGDPPQEPLPPPLLAFLTSTQRIQQWKRTRHback to top mRNA from alignment at P-wetherbeei_contig1695:2799..5551- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1695.5.1 ID=mRNA_P-wetherbeei_contig1695.5.1|Name=mRNA_P-wetherbeei_contig1695.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2753bp|location=Sequence derived from alignment at P-wetherbeei_contig1695:2799..5551- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1695:2799..5551- >mRNA_P-wetherbeei_contig1695.5.1 ID=mRNA_P-wetherbeei_contig1695.5.1|Name=mRNA_P-wetherbeei_contig1695.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1248bp|location=Sequence derived from alignment at P-wetherbeei_contig1695:2799..5551- (Phaeothamnion wetherbeei SAG_119_79)back to top |