mRNA_P-wetherbeei_contig16946.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig16946.1.1
Unique NamemRNA_P-wetherbeei_contig16946.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig16946.1.1 vs. uniprot
Match: A0A6H5JDI8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDI8_9PHAE)

HSP 1 Score: 251 bits (642), Expect = 5.990e-74
Identity = 162/386 (41.97%), Postives = 222/386 (57.51%), Query Frame = 1
Query:    7 AELGKRKNRWGEDS---AGGGPVADPVATAAAVAAALGVGAAPKEVKKQKKIYVPDTPPDINFAGIIIGPRGSALKEMQERTGARIIIRGRGSQKLCLQASYEPQ-----HVVLEGGDAAIEAAEREINAIFSNPAHAMQLKQQQLQTLNDINNXXXXXXXXXXXXXXXXXXXXXXXXAGADGAATADEIVVQLNVSNALVGSIIGRAGENVQRMQRDFAISVQIGRASDMQPGQTDRPVTLRGPRPAVEACKAHIEAILSEKERG-GGGYVNPAPGGAPPAXXXXXXXXXXXXXSHYGPGXXXXXXXXXXDDGGSSTVQVPVPNDKVGLVIGKGGGTIKGIQMRTGTNVQVPPAADADDPTRRTISVTGPSLDATDRAIAEIQNI 1137
            +ELGKRKNRWGED    A   P    +  A    A  GV +A K++    K Y     P+ NF G++IGPRGS+LK M++RTGA+I+IRGRGS K   + S +P+     HVV+EG DAA+  A +EI  IF +P  A+ +K +QL+ L D+N            XX             A G A  +E  V++ V + +VG IIGR G N+Q MQRD+ I++QI   +D+      RPV L+G R +VE C++ I  I+S++E    GG++   PGG                 +HYGPG          D    +T  + +P+DKVGLVIGKGGGTIKG+Q RTG N+Q+P  ADA+D T+RTI ++  + DA DRA+AE+QNI
Sbjct:   51 SELGKRKNRWGEDPQQPAPSMPAGFGLPAALMAQATAGVPSARKKIMVPVKEY-----PEFNFMGVLIGPRGSSLKAMEQRTGAKILIRGRGSTK---EPSSDPEANEDMHVVIEGTDAAVAVATQEIETIFKDPQRALIVKSEQLKNLADLNGSGAYGGASGGAXX-------------AYGPAGGEEYEVEMGVPSKMVGLIIGRGGSNIQSMQRDYQITIQIASQNDVPADSETRPVKLKGGRQSVEQCRSQINQIISDRENELQGGFI---PGGV-----------SGGGGTHYGPGR---------DSSSQATNHLTIPDDKVGLVIGKGGGTIKGVQGRTGANIQIPGEADANDRTKRTIVISAGTKDAADRAMAEVQNI 392          
BLAST of mRNA_P-wetherbeei_contig16946.1.1 vs. uniprot
Match: D7FLD4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLD4_ECTSI)

HSP 1 Score: 249 bits (637), Expect = 1.580e-73
Identity = 162/386 (41.97%), Postives = 221/386 (57.25%), Query Frame = 1
Query:    1 SHAELGKRKNRWGEDSAGGGPVADPVATAAAVAAALGVGAAPKEVKKQKKIYVP-DTPPDINFAGIIIGPRGSALKEMQERTGARIIIRGRGSQKLCLQASYEPQ-----HVVLEGGDAAIEAAEREINAIFSNPAHAMQLKQQQLQTLNDINNXXXXXXXXXXXXXXXXXXXXXXXXAGADGAATADEIVVQLNVSNALVGSIIGRAGENVQRMQRDFAISVQIGRASDMQPGQTDRPVTLRGPRPAVEACKAHIEAILSEKERG-GGGYVNPAPGGAPPAXXXXXXXXXXXXXSHYGPGXXXXXXXXXXDDGGSSTVQVPVPNDKVGLVIGKGGGTIKGIQMRTGTNVQVPPAADADDPTRRTISVTGPSLDATDRAIAEIQNI 1137
            S +ELGKRKNRWGED     P    +     + AAL   A       +KKI VP    P+ NF G++IGPRGS+LK M++RTGA+I+IRGRGS K   + S +P+     HVV+EG DAA+  A +EI  IF +P  A+ +K +QL+ L D+N            XX             A G A  +E  V++ V + +VG IIGR G N+Q MQRD+ I++QI   +D+      RPV L+G R +VE C++ I  I++++E    GG++   PGG                 +HYGPG          D    +T  + +P+DKVGLVIGKGGGTIKG+Q RTG N+Q+P  ADA+D T RTI ++  + DA DRA+AE+QNI
Sbjct:   49 SESELGKRKNRWGEDPQQPAP---SMPAGFGLPAALMAQATAGVPTARKKIMVPVKEHPEFNFMGVLIGPRGSSLKAMEQRTGAKILIRGRGSTK---EPSSDPEANEDMHVVIEGTDAAVAVATQEIETIFKDPQRALIVKSEQLKNLADLNGSGAYGGASGGAXX-------------AYGPAGGEEYEVEMGVPSKMVGLIIGRGGSNIQSMQRDYQITIQIASQNDVPADSETRPVKLKGGRQSVEQCRSQINQIITDRENELQGGFI---PGGV----------AGGGGGAHYGPGR---------DSSSQATNHLTIPDDKVGLVIGKGGGTIKGVQGRTGANIQIPGEADANDRTMRTIVISAGTKDAADRAMAEVQNI 393          
BLAST of mRNA_P-wetherbeei_contig16946.1.1 vs. uniprot
Match: A0A835YN15_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN15_9STRA)

HSP 1 Score: 195 bits (495), Expect = 7.240e-53
Identity = 160/381 (41.99%), Postives = 212/381 (55.64%), Query Frame = 1
Query:   13 LGKRKNRWG--EDSAGGGPVADPVATAAAVAAALGVGAAPKEVKKQKKIYVPDTPPDINFAGIIIGPRGSALKEMQERTGARIIIRGRGSQKLCLQASYEPQHVVLEGGDAAIEAAEREINAIFSNPAHAMQ----LKQQQLQTLNDINNXXXXXXXXXXXXXXXXXXXXXXXXAGADGAATADEIVVQLNVSNALVGSIIGRAGENVQRMQRDFAISVQIGRASDMQPGQTDRPVTLRGPRPAVEACKAHIEAILSEKERGGGGYVNPAPGGAPPAXXXXXXXXXXXXXSHYGPGXXXXXXXXXXDDGGSSTVQVPVPNDKVGLVIGKGGGTIKGIQMRTGTNVQVPPAADADDPTRRTISVTGPSLDATDRAIAEIQNI 1137
            LGKRK+RW   ED A G   ++PVA                  KKQ KI VP+        G+ +G  G++LK M+E TGA+I I G+G+      AS EP HVV+EG D  I  A +EI  +   P  A+     L +    T   +  XX                        A G    DE+     + N +VG +IGR GEN+Q++QR++ +++QI +A D++PG T RPVTL+GP+ ++   KA ++ ++ E++ G      P  GG    XXXXXXXXXXXXX      XXXXXXXXX   G    V +P+PNDKVGLVIGK GGTIKGIQMRT +N+QVPP  D DDPTRRTI++  PS    D A+ E+QN+
Sbjct:   54 LGKRKDRWSDNEDEANG-HASEPVA------------------KKQSKIVVPE--------GVGVGGLGTSLKAMEETTGAKISIHGKGAGDGA--ASEEPLHVVVEGTDIEIATATKEIEGLLKQPEAAVATPAVLAEPSPLTAATLGXXXSTMAAGQFQVASTMPAVGMMPTGDA-GTVAFDEM--HFEIPNEMVGVVIGRGGENIQKIQREYGVNIQIAKAQDVRPGATTRPVTLKGPKHSLVPAKAEVDKLIMERQAG----FAPTLGGGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGPGPREQVTMPIPNDKVGLVIGKQGGTIKGIQMRTSSNIQVPPQPDMDDPTRRTITIAAPSKMQIDLAMREVQNV 398          
BLAST of mRNA_P-wetherbeei_contig16946.1.1 vs. uniprot
Match: A0A835ZE80_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE80_9STRA)

HSP 1 Score: 193 bits (491), Expect = 2.740e-52
Identity = 140/388 (36.08%), Postives = 205/388 (52.84%), Query Frame = 1
Query:   10 ELGKRKNRWGEDSAGGGPVADPVATAAAVAAALGVGAAPKEVKKQKKIYVPD-TPPDINFAGIIIGPRGSALKEMQERTGARIIIRGRGSQKLCLQA--SYEPQHVVLEGGDAAIEAAEREINAIFSNPAHAMQLKQQQLQTLNDINNXXXXXXXXXXXXXXXXXXXXXXXXA---------GADGAATADEIVVQLNVSNALVGSIIGRAGENVQRMQRDFAISVQIGRASDMQPGQTDRPVTLRGPRPAVEACKAHIEAILSEKERGGGGYVNPAPGGAPPAXXXXXXXXXXXXXSHYGPGXXXXXXXXXXDDGGSSTVQVPVPNDKVGLVIGKGGGTIKGIQMRTGTNVQVPPAADADDPTRRTISVTGPSLDATDRAIAEIQNI 1137
            ELGKRK RW E               A  +   G G A     K+ K+ +P+      +  G+++GP+GS ++ MQE+TGA+I IRGRGS         + EP HV++EG D A+ +A REI +I  NP  A +LK QQL  L  + +                        A         GA      DE   +  + NA+VG +IGR GEN+QR+QR+F +++QI +++D+ PG   RP+TL+GP  A+ A KA +  ++++++                 XXXXXXX   XXX + G G              + T+ + +PNDKVGLVIGKGG TIKGIQ RT  +VQ+PP  DAD+P  RTI+++G S    + A++E++++
Sbjct:   46 ELGKRKARWSEQ------------VEAPSSYGNGGGGAGFGASKRNKVPIPEHLARGGSIMGMLLGPKGSTIRAMQEKTGAKIQIRGRGSNPKPGDDHDADEPLHVMIEGSDQAVSSATREIQSILHNPEEANRLKHQQLTDLASMRSGMGMNTSGMPSANSPYGPPSNLGGAQYSGSSLMGGASNGGGVDEAAFE--IPNAMVGVVIGRGGENIQRIQREFGVNIQIAKSTDIPPGAVARPITLKGPPQALAAAKAEVMNLINDRQXXXXXXXX---------XXXXXXXGTYXXXXNAGLGSYSA----------NETITMTIPNDKVGLVIGKGGATIKGIQSRTQASVQIPPTPDADNPACRTITISGASTQQVEIAVSEVRSV 400          
BLAST of mRNA_P-wetherbeei_contig16946.1.1 vs. uniprot
Match: F0WX26_9STRA (Uncharacterized protein AlNc14C340G10783 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WX26_9STRA)

HSP 1 Score: 176 bits (447), Expect = 9.300e-47
Identity = 135/381 (35.43%), Postives = 185/381 (48.56%), Query Frame = 1
Query:   10 ELGKRKNRWGEDSAGGGPVADPVATAAAVAAALGVGAAPKEVKKQKKIYVP-DTPPDINFAGIIIGPRGSALKEMQERTGARIIIRGRGSQKLCLQASYEPQ-----HVVLEG-GDAAIEAAEREINAIFSNPAHAMQLKQQQLQTLNDINNXXXXXXXXXXXXXXXXXXXXXXXXAGADGAATAD-EIVVQLNVSNALVGSIIGRAGENVQRMQRDFAISVQIGRASDMQPGQTDRPVTLRGPRPAVEACKAHIEAILSEKERGGGGYVNPAPGGAPPAXXXXXXXXXXXXXSHYGPGXXXXXXXXXXDDGGSSTVQVPVPNDKVGLVIGKGGGTIKGIQMRTGTNVQVPPAADADDPTRRTISVTGPSLDATDRAIAEI 1128
            ELGKRK RWG +        DP A                  KK+KK+Y+P D  PDINF G++IGPRGS  K M++ +GA+I+IRG+GS K    A  EP      HV++    + AI  A+  I  I  NP  AM+LKQ+QL+ + ++                           G  G  +AD     Q+ V    VG IIGR GE ++ +Q      +QI R  +      DR V++ G   AVE+ K  I+ +L E+  GGG   +   GG+ P                                 GS T+++ VPND+VGLVIG+GG TI+ IQ+RTGTN+ VP   DA +PT R I+V G +++A D A  EI
Sbjct:   25 ELGKRKTRWGSE--------DPTAE-----------------KKRKKVYIPVDKYPDINFMGLLIGPRGSNQKRMEDESGAKILIRGKGSSK---DAFGEPDENDDLHVLITADSEEAIARAQASIEEILFNPQQAMKLKQEQLRKVAELKGAGVDGNEF-----------------GHYGPGSADGSQAYQMPVPRTYVGYIIGRGGETIRDLQARSGAHIQIVREEEGAAFTPDRFVSIAGTEEAVESAKKLIQNLLDERASGGGSGDDARYGGSNPD--------------------------------GSETLEILVPNDRVGLVIGRGGATIRSIQVRTGTNITVPQTPDATNPTMRKITVKG-TMEAKDAAKNEI 327          
BLAST of mRNA_P-wetherbeei_contig16946.1.1 vs. uniprot
Match: A0A024G497_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G497_9STRA)

HSP 1 Score: 168 bits (426), Expect = 1.320e-43
Identity = 123/340 (36.18%), Postives = 171/340 (50.29%), Query Frame = 1
Query:  124 PKEVKKQKKIYVP-DTPPDINFAGIIIGPRGSALKEMQERTGARIIIRGRGSQKLCLQASYEPQ--HVVLEG-GDAAIEAAEREINAIFSNPAHAMQLKQQQLQTLNDINNXXXXXXXXXXXXXXXXXXXXXXXXAGADGAATAD-EIVVQLNVSNALVGSIIGRAGENVQRMQRDFAISVQIGRASDMQPGQTDRPVTLRGPRPAVEACKAHIEAILSEKERGGGGYVNPAPGGAPPAXXXXXXXXXXXXXSHYGPGXXXXXXXXXXDDGGSSTVQVPVPNDKVGLVIGKGGGTIKGIQMRTGTNVQVPPAADADDPTRRTISVTGPSLDATDRAIAEI 1128
            P   KK+KK+Y+P D  PDINF G++IGPRGS  K M++ +GA+I+IRG+GS K       E    HV++    D AI  A+  I  I  NP  AM+LKQ+QL+ + ++                           G  G  +AD     Q+ V    VG IIGR GE ++ +Q      +QI R  +      +R V++ G   AVE+ K  I+ +L E+  GGGG  +   GG  P                                 GS T+++ VPND+VGLVIG+GG TI+ IQ+RTGTN+ VP   DA +PT R I+V G +++A D A  EI
Sbjct:   38 PSLEKKRKKVYIPVDKYPDINFMGLLIGPRGSNQKRMEDESGAKILIRGKGSSKDAFGDPDENDELHVLITAESDEAIARAQVSIEEILFNPQQAMKLKQEQLRKVAELKGAGIDGGNEF----------------GHYGPGSADGSKAYQMPVPRTYVGYIIGRGGETIRDLQARSGAHIQIVREEEGAAFTPERFVSIAGTEDAVESAKKLIQNLLDERANGGGGGDDARYGGTNPD--------------------------------GSETLEILVPNDRVGLVIGRGGATIRSIQVRTGTNITVPQTPDASNPTMRKITVKG-TVEAKDAAKNEI 328          
BLAST of mRNA_P-wetherbeei_contig16946.1.1 vs. uniprot
Match: A0A485LAJ5_9STRA (Aste57867_18604 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LAJ5_9STRA)

HSP 1 Score: 167 bits (422), Expect = 8.580e-43
Identity = 122/376 (32.45%), Postives = 181/376 (48.14%), Query Frame = 1
Query:   13 LGKRKNRWGEDSAGGGPVADPVATAAAVAAALGVGAAPKEVKKQKKIYVP-DTPPDINFAGIIIGPRGSALKEMQERTGARIIIRGRGSQKLCLQASYEPQ--HVVLEGG-DAAIEAAEREINAIFSNPAHAMQLKQQQLQTLNDINNXXXXXXXXXXXXXXXXXXXXXXXXAGADGAATADEIVVQLNVSNALVGSIIGRAGENVQRMQRDFAISVQIGRASDMQPGQTDRPVTLRGPRPAVEACKAHIEAILSEKERGGGGYVNPAPGGAPPAXXXXXXXXXXXXXSHYGPGXXXXXXXXXXDDGGSSTVQVPVPNDKVGLVIGKGGGTIKGIQMRTGTNVQVPPAADADDPTRRTISVTGPSLDATDRAIAEI 1128
            LGKRK+RW E         DP                  + KK+KK+Y+P D  PDINF G++IGPRGS  K M+  +G++I+IRG+GS K     + E +  HV++    DA I  A+RE+  I  NP  AM+LKQ+QL+ + + NN                            G    D   + + V   LVG IIG+ GE ++ +Q      +Q+ R +++    T+R V   G    +E  K  I  +LS++  GG  ++                                         G   ++++PVPNDKVGL+IG+ G T+KG+Q RTG ++ +PPAAD+D+P  RT+ VTG S +A ++A  EI
Sbjct:   27 LGKRKSRWEEG--------DPTGM---------------DGKKRKKVYIPVDKYPDINFMGLLIGPRGSNQKRMETLSGSKILIRGKGSSKEPTGDADENEDLHVLITADTDAQIARAQREVEDILFNPDQAMKLKQEQLRQVAENNNSYDGHYGP------------------GSGGGGDDHTTLNMPVPRNLVGLIIGKGGETIRELQGKSGAHIQVARENEVNVNATERTVMCSGTPAQLEMAKQLITDLLSDRMHGGQ-FI-----------------------------------------GQGESMKMPVPNDKVGLIIGRQGATVKGVQQRTGASIVIPPAADSDNPGYRTLIVTG-SHEAREKARVEI 318          
BLAST of mRNA_P-wetherbeei_contig16946.1.1 vs. uniprot
Match: A0A6G0WVZ7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WVZ7_9STRA)

HSP 1 Score: 164 bits (416), Expect = 3.130e-42
Identity = 122/376 (32.45%), Postives = 183/376 (48.67%), Query Frame = 1
Query:   13 LGKRKNRWGEDSAGGGPVADPVATAAAVAAALGVGAAPKEVKKQKKIYVP-DTPPDINFAGIIIGPRGSALKEMQERTGARIIIRGRGSQKLCLQASYEPQ--HVVLEGG-DAAIEAAEREINAIFSNPAHAMQLKQQQLQTLNDINNXXXXXXXXXXXXXXXXXXXXXXXXAGADGAATADEIVVQLNVSNALVGSIIGRAGENVQRMQRDFAISVQIGRASDMQPGQTDRPVTLRGPRPAVEACKAHIEAILSEKERGGGGYVNPAPGGAPPAXXXXXXXXXXXXXSHYGPGXXXXXXXXXXDDGGSSTVQVPVPNDKVGLVIGKGGGTIKGIQMRTGTNVQVPPAADADDPTRRTISVTGPSLDATDRAIAEI 1128
            LGKRK+RW ED         P++                + KK+KK+Y+P +  PDINF G++IGPRGS  K M+  +GARI+IRG+G+ K    A  E +  HV++ G  D  I  A+ E+  I  NP  AM+LKQ+QL+ + + +N                         G D     D   + + V   LVG IIG+ GE ++ +Q      +Q+ R ++M    T+R V   G    +E  K  I  +LS++  GG  ++                                         G   ++++PVPNDKVGL+IG+ G T+KG+Q RTG ++ +PPAAD+D+P  RT+ V+G S +A ++A  EI
Sbjct:   27 LGKRKSRWEED---------PLSM--------------MDGKKRKKVYIPVEKYPDINFLGLLIGPRGSNQKRMETLSGARILIRGKGASKELTGAPDENEDLHVLIAGDTDEQIARAQHEVEDILFNPEKAMKLKQEQLRQVAENSNSYDGHYGP----------------GGGD-----DHSTLNIPVPRNLVGLIIGKGGETIRELQGKSGCHIQVARETEMNSEATERTVMCSGSPAQLEMAKQLINDLLSDRMHGGQ-FI-----------------------------------------GSGESMKMPVPNDKVGLIIGRQGATVKGVQQRTGASIVIPPAADSDNPGFRTLIVSG-SHEAREKARIEI 315          
BLAST of mRNA_P-wetherbeei_contig16946.1.1 vs. uniprot
Match: W2PLK2_PHYPN (Uncharacterized protein n=35 Tax=Phytophthora TaxID=4783 RepID=W2PLK2_PHYPN)

HSP 1 Score: 164 bits (416), Expect = 6.520e-42
Identity = 127/382 (33.25%), Postives = 193/382 (50.52%), Query Frame = 1
Query:   13 LGKRKNRWGEDSAGGGPVADPVATAAAVAAALGVGAAPKEVKKQKKIYVP-DTPPDINFAGIIIGPRGSALKEMQERTGARIIIRGRGSQKLCLQASYEPQ-----HVVLEGG-DAAIEAAEREINAIFSNPAHAMQLKQQQLQTLNDINNXXXXXXXXXXXXXXXXXXXXXXXXAGADGAATADEIVVQLNVSNALVGSIIGRAGENVQRMQRDFAISVQIGRASDMQPGQTDRPVTLRGPRPAVEACKAHIEAILSEKERGGGGYVNPAPGGAPPAXXXXXXXXXXXXXSHYGPGXXXXXXXXXXDDGGSSTVQVPVPNDKVGLVIGKGGGTIKGIQMRTGTNVQVPPAADADDPTRRTISVTGPSLDATDRAIAEIQNI 1137
            LGKRK+RW  D  GG            V  A G+G      KK+KK+Y+P D  PDINF G++IGPRGS  K M++ +GARI+IRG+GS K     + EP      HV++    D A+  A+  +  I  NP  AM+LKQ+QL+ + ++N                          G D  A++ +    + V   LVG IIGR GE ++ +Q      +QI R  +  P   DR V + G + A++  +  I+ ++ E+++      N + GG                 + YG            +  GS +V++ VPN++VGL+IG+GG TIK IQ RTGT+V +P   D + P +R I++ G +++A + A  EIQ++
Sbjct:   26 LGKRKSRWEGDVDGG------------VRPAPGMGE-----KKRKKVYIPVDKYPDINFMGLLIGPRGSNQKRMEDESGARILIRGKGSSK---DPTGEPDENEELHVLITADTDEAVAKAQSAVEDILFNPQQAMKLKQEQLRKVAELNGTLNENYDSHAIGQNSGAHYGP----GNDAQASSYD----MKVPRELVGYIIGRGGETIRDLQMKSGAHIQIVREEEGAPQTPDRYVNIAGNQEALDLAQRLIQNLIDERQQ------NQSAGG-------FRERDDRDRMARYG----------GINPDGSDSVELLVPNERVGLIIGRGGCTIKAIQQRTGTSVTIPQTPDPNHPDKRLITIRG-TMEAKEAAKFEIQSL 355          
BLAST of mRNA_P-wetherbeei_contig16946.1.1 vs. uniprot
Match: A0A3F2RPH9_9STRA (Uncharacterized protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RPH9_9STRA)

HSP 1 Score: 161 bits (408), Expect = 1.900e-41
Identity = 123/382 (32.20%), Postives = 189/382 (49.48%), Query Frame = 1
Query:   13 LGKRKNRWGEDSAGGGPVADPVATAAAVAAALGVGAAPKEVKKQKKIYVP-DTPPDINFAGIIIGPRGSALKEMQERTGARIIIRGRGSQKLCLQASYEPQ--HVVLEGG-DAAIEAAEREINAIFSNPAHAMQLKQQQLQTLNDINNXXXXXXXXXXXXXXXXXXXXXXXXAGADGAATADEIVVQLNVSNALVGSIIGRAGENVQRMQRDFAISVQIGRASDMQPGQTDRPVTLRGPRPAVEACKAHIEAILSEKER---GGGGYVNPAPGGAPPAXXXXXXXXXXXXXSHYGPGXXXXXXXXXXDDGGSSTVQVPVPNDKVGLVIGKGGGTIKGIQMRTGTNVQVPPAADADDPTRRTISVTGPSLDATDRAIAEIQNI 1137
            LGKR +RW  D+ GG            V  A G+G      KK+KK+Y+P D  PDINF G++IGPRGS  K M++ +GARI+IRG+GS K       E +  HV++    D ++  A+  +  I  NP  AM+LKQ+QL+ + ++N                          G+D   + D     + V   LVG IIGR GE ++ +Q      +QI R  +  P   DR V + G + +++  +  I+ +L E+++   GG G                         + YG            +  G+ +V++ VPN++VGL+IG+GG TIK IQ RTGT+V +P   D + P  R I++ G +++A + A  EIQ++
Sbjct:   25 LGKRSSRWEGDADGG------------VRPAPGLGE-----KKRKKVYIPVDKYPDINFMGLLIGPRGSNQKRMEDESGARILIRGKGSSKDPTGDPDENEELHVLITADTDESVAKAQSAVEDILFNPQQAMKLKQEQLRKVAELNGTLNENYGGPKSGGDNGQSGAQHYGPGSDNQTSYD-----MKVPRDLVGYIIGRGGETIRDLQMKSGAHIQIVREEEGAPQTPDRFVNITGNQESLDLAQKLIQNLLDERQQNQTGGSGLRE---------------RDDRDRMARYG----------GINPDGTESVELLVPNERVGLIIGRGGCTIKAIQQRTGTSVTIPQTPDPNHPDMRLITIRG-TMEAKEAAKFEIQSM 358          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16946.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JDI8_9PHAE5.990e-7441.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FLD4_ECTSI1.580e-7341.97Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YN15_9STRA7.240e-5341.99Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZE80_9STRA2.740e-5236.08Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
F0WX26_9STRA9.300e-4735.43Uncharacterized protein AlNc14C340G10783 n=1 Tax=A... [more]
A0A024G497_9STRA1.320e-4336.18Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
A0A485LAJ5_9STRA8.580e-4332.45Aste57867_18604 protein n=1 Tax=Aphanomyces stella... [more]
A0A6G0WVZ7_9STRA3.130e-4232.45Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
W2PLK2_PHYPN6.520e-4233.25Uncharacterized protein n=35 Tax=Phytophthora TaxI... [more]
A0A3F2RPH9_9STRA1.900e-4132.20Uncharacterized protein n=1 Tax=Phytophthora kerno... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16946contigP-wetherbeei_contig16946:1..1301 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FLD4
PFAMsKH_1,SF1-HH
Model size1137
Max annot lvl2759|Eukaryota
KEGG koko:K13095,ko:K13210
Hectar predicted targeting categoryother localisation
Exons2
Evalue2.59e-74
EggNOG OGsCOG5176@1|root,KOG1676@1|root,KOG0119@2759|Eukaryota,KOG1676@2759|Eukaryota
Ec32 ortholog descriptionK Homology domain, type 1
Ec32 orthologEc-12_007740.1
Descriptionnegative regulation of low-density lipoprotein particle clearance
Cds size1137
COG categoryS
BRITEko00000,ko03019,ko03041
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186102.9199808-CDS-P-wetherbeei_contig16946:0..8361683186102.9199808-CDS-P-wetherbeei_contig16946:0..836Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16946 1..836 -
1683186102.932669-CDS-P-wetherbeei_contig16946:1000..13011683186102.932669-CDS-P-wetherbeei_contig16946:1000..1301Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16946 1001..1301 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16946.1.1prot_P-wetherbeei_contig16946.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig16946 1..1301 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig16946.1.1

>prot_P-wetherbeei_contig16946.1.1 ID=prot_P-wetherbeei_contig16946.1.1|Name=mRNA_P-wetherbeei_contig16946.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=379bp
SHAELGKRKNRWGEDSAGGGPVADPVATAAAVAAALGVGAAPKEVKKQKK
IYVPDTPPDINFAGIIIGPRGSALKEMQERTGARIIIRGRGSQKLCLQAS
YEPQHVVLEGGDAAIEAAEREINAIFSNPAHAMQLKQQQLQTLNDINNSS
SGGGGVHYGGPPAHYGALPPPPAGADGAATADEIVVQLNVSNALVGSIIG
RAGENVQRMQRDFAISVQIGRASDMQPGQTDRPVTLRGPRPAVEACKAHI
EAILSEKERGGGGYVNPAPGGAPPAPGPGYGAGGGGGGSHYGPGTAGGAG
GGSGDDGGSSTVQVPVPNDKVGLVIGKGGGTIKGIQMRTGTNVQVPPAAD
ADDPTRRTISVTGPSLDATDRAIAEIQNI
back to top

mRNA from alignment at P-wetherbeei_contig16946:1..1301-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig16946.1.1 ID=mRNA_P-wetherbeei_contig16946.1.1|Name=mRNA_P-wetherbeei_contig16946.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1301bp|location=Sequence derived from alignment at P-wetherbeei_contig16946:1..1301- (Phaeothamnion wetherbeei SAG_119_79)
TCCCACGCAGAGCTGGGCAAACGCAAAAACAGATGGGGCGAGGACAGTGC TGGAGGCGGGCCGGTGGCCGACCCCGTTGCGACGGCAGCCGCGGTTGCCG CCGCTCTTGGCGTCGGGGCCGCGCCGAAGGAGGTCAAGAAGCAAAAGAAG ATCTACGTGCCCGACACGCCTCCGGACATCAACTTCGCCGGCATCATCAT CGGGCCCCGCGGCTCGGCACTCAAGGAGATGCAGGAGCGCACCGGCGCGA GGATCATCATCCGCGGCCGCGGCAGCCAGAAGTTATGCTTGCAAGCCTCT TGTTCCAACCTATTGCCTGAGGGCCTCCCAACTGTCCTTCCCTCTCTTCA GTGGACGGCCCCGTGCTCGTAAAAATGTACAATTTCCTTCGCCTATTAAT CTCGTACTTCCTTTCCCTTTTCATTTTCTCACCCTTGCCACAGGACGCTG GCGGGCCGGACGCAGACGAGCCGCAGCACGTTGTGCTGGAGGGCGGCGAC GCCGCCATCGAGGCGGCAGAGCGTGAGATCAACGCCATATTCTCCAACCC GGCGCACGCCATGCAGCTCAAGCAGCAGCAGCTCCAGACGCTCAACGACA TCAACAATAGCAGTAGCGGCGGTGGCGGCGTGCACTATGGCGGGCCGCCG GCGCACTACGGCGCGCTGCCGCCCCCACCGGCGGGCGCCGACGGCGCCGC CACCGCCGACGAGATCGTCGTGCAGCTCAACGTGTCCAATGCTCTCGTCG GCTCCATCATCGGCCGCGCCGGCGAGAACGTGCAGCGCATGCAGCGTGAC TTTGCCATCTCCGTGCAGATCGGCCGCGCCAGCGACATGCAGCCGGGGCA GACGGACCGTCCGGTCACGCTCCGCGGGCCACGCCCGGCCGTCGAGGCGT GCAAGGCGCACATTGAGGCCATCCTCTCCGAGAAGGAGCGTGGCGGCGGC GGCTACGTCAACCCGGCGCCCGGCGGCGCGCCTCCCGCGCCCGGCCCCGG CTATGGCGCGGGCGGGGGCGGCGGCGGCAGCCACTACGGGCCGGGCACCG CCGGAGGCGCCGGCGGTGGCAGCGGCGACGACGGCGGCAGCAGCACGGTG CAGGTGCCGGTGCCGAACGACAAGGTGGGGCTCGTGATCGGCAAGGGCGG CGGCACCATCAAGGGCATTCAGATGCGCACGGGCACGAACGTGCAGGTTC CGCCGGCTGCTGACGCCGATGACCCGACCCGCCGCACCATCAGCGTCACG GGGCCGAGCCTCGACGCCACGGACCGCGCAATTGCGGAGATCCAGAACAT C
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig16946:1..1301-

>mRNA_P-wetherbeei_contig16946.1.1 ID=mRNA_P-wetherbeei_contig16946.1.1|Name=mRNA_P-wetherbeei_contig16946.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1137bp|location=Sequence derived from alignment at P-wetherbeei_contig16946:1..1301- (Phaeothamnion wetherbeei SAG_119_79)
TCCCACGCAGAGCTGGGCAAACGCAAAAACAGATGGGGCGAGGACAGTGC
TGGAGGCGGGCCGGTGGCCGACCCCGTTGCGACGGCAGCCGCGGTTGCCG
CCGCTCTTGGCGTCGGGGCCGCGCCGAAGGAGGTCAAGAAGCAAAAGAAG
ATCTACGTGCCCGACACGCCTCCGGACATCAACTTCGCCGGCATCATCAT
CGGGCCCCGCGGCTCGGCACTCAAGGAGATGCAGGAGCGCACCGGCGCGA
GGATCATCATCCGCGGCCGCGGCAGCCAGAAGTTATGCTTGCAAGCCTCT
TACGAGCCGCAGCACGTTGTGCTGGAGGGCGGCGACGCCGCCATCGAGGC
GGCAGAGCGTGAGATCAACGCCATATTCTCCAACCCGGCGCACGCCATGC
AGCTCAAGCAGCAGCAGCTCCAGACGCTCAACGACATCAACAATAGCAGT
AGCGGCGGTGGCGGCGTGCACTATGGCGGGCCGCCGGCGCACTACGGCGC
GCTGCCGCCCCCACCGGCGGGCGCCGACGGCGCCGCCACCGCCGACGAGA
TCGTCGTGCAGCTCAACGTGTCCAATGCTCTCGTCGGCTCCATCATCGGC
CGCGCCGGCGAGAACGTGCAGCGCATGCAGCGTGACTTTGCCATCTCCGT
GCAGATCGGCCGCGCCAGCGACATGCAGCCGGGGCAGACGGACCGTCCGG
TCACGCTCCGCGGGCCACGCCCGGCCGTCGAGGCGTGCAAGGCGCACATT
GAGGCCATCCTCTCCGAGAAGGAGCGTGGCGGCGGCGGCTACGTCAACCC
GGCGCCCGGCGGCGCGCCTCCCGCGCCCGGCCCCGGCTATGGCGCGGGCG
GGGGCGGCGGCGGCAGCCACTACGGGCCGGGCACCGCCGGAGGCGCCGGC
GGTGGCAGCGGCGACGACGGCGGCAGCAGCACGGTGCAGGTGCCGGTGCC
GAACGACAAGGTGGGGCTCGTGATCGGCAAGGGCGGCGGCACCATCAAGG
GCATTCAGATGCGCACGGGCACGAACGTGCAGGTTCCGCCGGCTGCTGAC
GCCGATGACCCGACCCGCCGCACCATCAGCGTCACGGGGCCGAGCCTCGA
CGCCACGGACCGCGCAATTGCGGAGATCCAGAACATC
back to top