mRNA_P-wetherbeei_contig1694.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1694.2.1 vs. uniprot
Match: A0A7S3XQ96_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQ96_HETAK) HSP 1 Score: 126 bits (317), Expect = 1.590e-32 Identity = 63/92 (68.48%), Postives = 75/92 (81.52%), Query Frame = 2
Query: 467 PAESV---EENSVYVGQVDYDATPEELQEYFQGCGTINRVTILCDKMTGRPKGYAYIEFQDKGAVDLAILMNDTTFKGRQLKVTQTLFNLSG 733
PAE V +E SVYVGQVDY+A+PEELQ +FQ CGTINRVTILCDK TGRPKGYAY+EF +K +V+ A+L++D+ FKGRQLKVT NL G
Sbjct: 29 PAELVAGLDETSVYVGQVDYEASPEELQAHFQSCGTINRVTILCDKFTGRPKGYAYVEFLEKESVENALLLHDSLFKGRQLKVTPKRHNLPG 120
BLAST of mRNA_P-wetherbeei_contig1694.2.1 vs. uniprot
Match: A0A6G0XPI3_9STRA (RRM domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XPI3_9STRA) HSP 1 Score: 128 bits (321), Expect = 4.140e-32 Identity = 59/85 (69.41%), Postives = 71/85 (83.53%), Query Frame = 2
Query: 479 VEENSVYVGQVDYDATPEELQEYFQGCGTINRVTILCDKMTGRPKGYAYIEFQDKGAVDLAILMNDTTFKGRQLKVTQTLFNLSG 733
++ENS+Y+GQVDY++TPEELQ FQ CGTINRVTILCDK TG+PKGYAYIEF + AV+ A+L+NDTTF+GRQLKVT N G
Sbjct: 74 IDENSIYIGQVDYESTPEELQALFQSCGTINRVTILCDKFTGQPKGYAYIEFANHDAVESALLLNDTTFRGRQLKVTPKRVNERG 158
BLAST of mRNA_P-wetherbeei_contig1694.2.1 vs. uniprot
Match: A0A485KGA4_9STRA (Aste57867_5040 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KGA4_9STRA) HSP 1 Score: 128 bits (321), Expect = 5.130e-32 Identity = 59/85 (69.41%), Postives = 71/85 (83.53%), Query Frame = 2
Query: 479 VEENSVYVGQVDYDATPEELQEYFQGCGTINRVTILCDKMTGRPKGYAYIEFQDKGAVDLAILMNDTTFKGRQLKVTQTLFNLSG 733
++ENS+Y+GQVDY++TPEELQ FQ CGTINRVTILCDK TG+PKGYAYIEF + AV+ A+L+NDTTF+GRQLKVT N G
Sbjct: 77 IDENSIYIGQVDYESTPEELQALFQSCGTINRVTILCDKFTGQPKGYAYIEFANHDAVESALLLNDTTFRGRQLKVTAKRVNERG 161
BLAST of mRNA_P-wetherbeei_contig1694.2.1 vs. uniprot
Match: A0A024UT71_9STRA (RRM domain-containing protein n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A024UT71_9STRA) HSP 1 Score: 127 bits (319), Expect = 8.840e-32 Identity = 59/85 (69.41%), Postives = 70/85 (82.35%), Query Frame = 2
Query: 479 VEENSVYVGQVDYDATPEELQEYFQGCGTINRVTILCDKMTGRPKGYAYIEFQDKGAVDLAILMNDTTFKGRQLKVTQTLFNLSG 733
++ENS+Y+GQVDY++TPEELQ FQ CGTINRVTILCDK TG PKGYAYIEF + AV+ A+L+NDTTF+GRQLKVT N G
Sbjct: 75 IDENSIYIGQVDYESTPEELQALFQSCGTINRVTILCDKFTGMPKGYAYIEFANHDAVESALLLNDTTFRGRQLKVTPKRVNERG 159
BLAST of mRNA_P-wetherbeei_contig1694.2.1 vs. uniprot
Match: A0A3R6Z628_9STRA (RRM domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6Z628_9STRA) HSP 1 Score: 127 bits (319), Expect = 1.930e-31 Identity = 59/85 (69.41%), Postives = 70/85 (82.35%), Query Frame = 2
Query: 479 VEENSVYVGQVDYDATPEELQEYFQGCGTINRVTILCDKMTGRPKGYAYIEFQDKGAVDLAILMNDTTFKGRQLKVTQTLFNLSG 733
++ENS+Y+GQVDY++TPEELQ FQ CGTINRVTILCDK TG PKGYAYIEF + AV+ A+L+NDTTF+GRQLKVT N G
Sbjct: 105 IDENSIYIGQVDYESTPEELQALFQSCGTINRVTILCDKFTGMPKGYAYIEFANHDAVESALLLNDTTFRGRQLKVTPKRVNERG 189
BLAST of mRNA_P-wetherbeei_contig1694.2.1 vs. uniprot
Match: A0A2D4C1U4_PYTIN (Polyadenylatebinding protein 2 putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C1U4_PYTIN) HSP 1 Score: 126 bits (317), Expect = 2.330e-31 Identity = 59/86 (68.60%), Postives = 72/86 (83.72%), Query Frame = 2
Query: 476 SVEENSVYVGQVDYDATPEELQEYFQGCGTINRVTILCDKMTGRPKGYAYIEFQDKGAVDLAILMNDTTFKGRQLKVTQTLFNLSG 733
+++ENSVYVGQVDY +TPEELQ FQ CGTINRVTILCDK TG+PKGYAYIEF ++ AV+ A+L+NDT F+GRQ+KVT N+ G
Sbjct: 99 ALDENSVYVGQVDYGSTPEELQALFQSCGTINRVTILCDKFTGQPKGYAYIEFANRDAVESALLLNDTMFRGRQIKVTPKRQNIRG 184
BLAST of mRNA_P-wetherbeei_contig1694.2.1 vs. uniprot
Match: A0A067D344_SAPPC (RRM domain-containing protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067D344_SAPPC) HSP 1 Score: 126 bits (316), Expect = 2.380e-31 Identity = 60/86 (69.77%), Postives = 70/86 (81.40%), Query Frame = 2
Query: 476 SVEENSVYVGQVDYDATPEELQEYFQGCGTINRVTILCDKMTGRPKGYAYIEFQDKGAVDLAILMNDTTFKGRQLKVTQTLFNLSG 733
+++ENS+YVGQVDY+ATPEELQ FQ CGTINRVTILCDK TG+PKGYAYIEF AV+ A L+NDT+F+GRQLKVT N G
Sbjct: 70 AMDENSIYVGQVDYEATPEELQALFQSCGTINRVTILCDKFTGQPKGYAYIEFASHDAVESACLLNDTSFRGRQLKVTPKRVNERG 155
BLAST of mRNA_P-wetherbeei_contig1694.2.1 vs. uniprot
Match: M4BK87_HYAAE (RRM domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BK87_HYAAE) HSP 1 Score: 126 bits (316), Expect = 2.860e-31 Identity = 59/88 (67.05%), Postives = 70/88 (79.55%), Query Frame = 2
Query: 470 AESVEENSVYVGQVDYDATPEELQEYFQGCGTINRVTILCDKMTGRPKGYAYIEFQDKGAVDLAILMNDTTFKGRQLKVTQTLFNLSG 733
A VE+ S+Y+GQVDY +TPEELQ FQ CGTINRVTILCDK TG+PKGYAYIEF + AV+ A+L+NDT F+GRQLKVT N+ G
Sbjct: 97 AAQVEDTSIYIGQVDYGSTPEELQALFQSCGTINRVTILCDKFTGQPKGYAYIEFASRDAVESALLLNDTMFRGRQLKVTPKRMNVRG 184
BLAST of mRNA_P-wetherbeei_contig1694.2.1 vs. uniprot
Match: H3G6Y3_PHYRM (RRM domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=H3G6Y3_PHYRM) HSP 1 Score: 123 bits (309), Expect = 3.780e-31 Identity = 57/86 (66.28%), Postives = 70/86 (81.40%), Query Frame = 2
Query: 476 SVEENSVYVGQVDYDATPEELQEYFQGCGTINRVTILCDKMTGRPKGYAYIEFQDKGAVDLAILMNDTTFKGRQLKVTQTLFNLSG 733
S+++ S+Y+GQVDY +TPEELQ FQ CGTINRVTILCDK TG+PKGYAYIEF + AV+ A+L+NDT F+GRQLKVT N+ G
Sbjct: 53 SMDDTSIYIGQVDYGSTPEELQALFQSCGTINRVTILCDKFTGQPKGYAYIEFASRDAVESALLLNDTMFRGRQLKVTPKRQNVRG 138
BLAST of mRNA_P-wetherbeei_contig1694.2.1 vs. uniprot
Match: A0A7S2V693_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V693_9STRA) HSP 1 Score: 122 bits (305), Expect = 4.650e-31 Identity = 59/90 (65.56%), Postives = 74/90 (82.22%), Query Frame = 2
Query: 464 APAESVEENSVYVGQVDYDATPEELQEYFQGCGTINRVTILCDKMTGRPKGYAYIEFQDKGAVDLAILMNDTTFKGRQLKVTQTLFNLSG 733
APA +E+NS+YVGQVDY+ATPEELQ +F CGTINRVTILC+K T RPKGYAYIEF +K +V+ A+L+N++ FKGRQLKV+ N+ G
Sbjct: 14 APA-GMEDNSIYVGQVDYEATPEELQAHFASCGTINRVTILCNKFTSRPKGYAYIEFLEKESVENALLLNESLFKGRQLKVSPKRVNVPG 102 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1694.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1694.2.1 >prot_P-wetherbeei_contig1694.2.1 ID=prot_P-wetherbeei_contig1694.2.1|Name=mRNA_P-wetherbeei_contig1694.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=196bp MSGVDGTAAKDGVVSEDVMKGLASIEEEEDAAAKLMEAELHMATNGAPADback to top mRNA from alignment at P-wetherbeei_contig1694:4587..6698+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1694.2.1 ID=mRNA_P-wetherbeei_contig1694.2.1|Name=mRNA_P-wetherbeei_contig1694.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2112bp|location=Sequence derived from alignment at P-wetherbeei_contig1694:4587..6698+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1694:4587..6698+ >mRNA_P-wetherbeei_contig1694.2.1 ID=mRNA_P-wetherbeei_contig1694.2.1|Name=mRNA_P-wetherbeei_contig1694.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=588bp|location=Sequence derived from alignment at P-wetherbeei_contig1694:4587..6698+ (Phaeothamnion wetherbeei SAG_119_79)back to top |