mRNA_P-wetherbeei_contig16915.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig16915.1.1 vs. uniprot
Match: A0A6H5KQ17_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ17_9PHAE) HSP 1 Score: 177 bits (448), Expect = 2.990e-49 Identity = 85/170 (50.00%), Postives = 112/170 (65.88%), Query Frame = 1
Query: 4 AMSRGGVEEYRPDDWTDAESARLKRLVER------HGRAQWPAVAAHFPAKTAMQCMLHWRYTLNRNETIKGIGTWTADEDGRLQTLVTLF-----GQRWAKVAEHMPGRIPKQCRERYLNHLDPSLSKEP-WTPAEDAALLHWHDRYHNKFAEIGKHMPGRSYNALKNR 477
AM GVE YRP DW E+ +L LV + H WP++A +FP KT +QC+LHWR+TLN N I+G GTW A+ED RL+ L +F G RWAK+AE MPGR KQCRERY NH+DP + K+ WT EDA ++ H +HN+FA+I +++PGR Y+ +KNR
Sbjct: 296 AMEGAGVEGYRPTDWNQEETRKLDELVNQLVAPVTHA---WPSIARYFPTKTGIQCLLHWRFTLNDNGIIRGNGTWGAEEDERLRKLAPVFSSPSTGPRWAKIAEVMPGRTAKQCRERYNNHVDPGIKKDKIWTAEEDALVMQLHAEHHNQFAKIARNIPGRCYDDVKNR 462
BLAST of mRNA_P-wetherbeei_contig16915.1.1 vs. uniprot
Match: D8LH85_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH85_ECTSI) HSP 1 Score: 177 bits (448), Expect = 5.670e-48 Identity = 85/170 (50.00%), Postives = 112/170 (65.88%), Query Frame = 1
Query: 4 AMSRGGVEEYRPDDWTDAESARLKRLVER------HGRAQWPAVAAHFPAKTAMQCMLHWRYTLNRNETIKGIGTWTADEDGRLQTLVTLF-----GQRWAKVAEHMPGRIPKQCRERYLNHLDPSLSKEP-WTPAEDAALLHWHDRYHNKFAEIGKHMPGRSYNALKNR 477
AM GVE YRP DW E+ +L LV + H WP++A +FP KT +QC+LHWR+TLN N I+G GTW A+ED RL+ L +F G RWAK+AE MPGR KQCRERY NH+DP + K+ WT EDA ++ H +HN+FA+I +++PGR Y+ +KNR
Sbjct: 425 AMEGAGVEGYRPTDWNQEETRKLDELVNQLVAPVTHA---WPSIARYFPTKTGIQCLLHWRFTLNDNGIIRGNGTWGAEEDERLRKLAPVFSSPSTGPRWAKIAEVMPGRTAKQCRERYNNHVDPGIKKDKIWTAEEDALVMQLHAEHHNQFAKIARNIPGRCYDDVKNR 591
BLAST of mRNA_P-wetherbeei_contig16915.1.1 vs. uniprot
Match: A0A6H5JLY2_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLY2_9PHAE) HSP 1 Score: 177 bits (449), Expect = 2.560e-47 Identity = 80/159 (50.31%), Postives = 106/159 (66.67%), Query Frame = 1
Query: 1 AAMSRGGVEEYRPDDWTDAESARLKRLVERHGRAQWPAVAAHFPAKTAMQCMLHWRYTLNRNETIKGIGTWTADEDGRLQTLVTLFGQRWAKVAEHMPGRIPKQCRERYLNHLDPSLSKEPWTPAEDAALLHWHDRYHNKFAEIGKHMPGRSYNALKNR 477
A ++ G VE Y P +WT+ E++ L LV +G W ++A KT QCMLHWR+ LN N T+KG GTW + ED R+ +LV +FGQRW+ VAEHMPGR+ KQCRERYLN+LDP L + W+ ED LL + + FA+I + + GRSYN +KNR
Sbjct: 631 AVLNEGNVEPYLPQEWTEQEASVLAHLVGMYGPTNWGIISAGVGTKTETQCMLHWRFALNGNATVKGTGTWQSVEDERMLSLVQIFGQRWSTVAEHMPGRLAKQCRERYLNNLDPELRRGAWSREEDEKLLQLRGQQNKSFAKIAEQIDGRSYNDVKNR 789
BLAST of mRNA_P-wetherbeei_contig16915.1.1 vs. uniprot
Match: D8LCS2_ECTSI (Myb-like DNA-binding domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS2_ECTSI) HSP 1 Score: 167 bits (422), Expect = 9.830e-44 Identity = 80/176 (45.45%), Postives = 106/176 (60.23%), Query Frame = 1
Query: 1 AAMSRGGVEEYRPDDWTDAESARLKRLVERHGRAQWPAVAAHFPAKTAMQCMLHWRYTLNRNETIKGIGTWTADEDGRLQTLVTLFGQRWAKVAEHMPGRIPKQCRERYLNHLDPSLSKEPWTPA-----------------EDAALLHWHDRYHNKFAEIGKHMPGRSYNALKNR 477
A ++ G VE Y P +WT+ E++ L LV +G W ++A KT QCMLHWR+ LN N T+KG GTW + ED R+ +LV +FGQRW+ VAEHMPGR+ KQCRERYLN+LDP L + W+ ED LL + + FA+I + + GRSYN +KNR
Sbjct: 645 AVLNEGNVEPYLPQEWTEQEASVLAHLVGMYGPTNWGIISAGVATKTETQCMLHWRFALNGNATVKGTGTWQSVEDERMLSLVQIFGQRWSTVAEHMPGRLAKQCRERYLNNLDPELRRGAWSREARNKKQRVLCAYVGKGLEDEKLLQLRGQQNKSFAKIAEQIDGRSYNDVKNR 820
BLAST of mRNA_P-wetherbeei_contig16915.1.1 vs. uniprot
Match: D7FJZ9_ECTSI (Putative c-myb-like transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJZ9_ECTSI) HSP 1 Score: 162 bits (409), Expect = 1.390e-43 Identity = 79/159 (49.69%), Postives = 104/159 (65.41%), Query Frame = 1
Query: 4 AMSRGGVEEYRPDDWTDAESARLKRLVERHGRAQWPAVAAHFPAKTAMQCMLHWRYTLNRNETIKGIGTWTADEDGRLQTLVTLFGQRWAKVAEHMPGRIPKQCRERYLNHLDPSLSKE-PWTPAEDAALLHWHDRYHNKFAEIGKHMPGRSYNALKNR 477
A+ VE + P DWT + RL+ LV+ G +W +A P KTA CMLHWR +N + +KG GTWTA+ED RL LV + G +W+ +A H+PGRI KQCRERYLNHLDPSL K+ PWT E+A L+ N++AEI + + GRSYN ++NR
Sbjct: 231 AIKDANVEAHSPKDWTPELTKRLRDLVDELG-PKWSNIADKMPGKTATACMLHWRVGVNPDHMVKGSGTWTAEEDERLSKLVEVVGMKWSDLARHIPGRIAKQCRERYLNHLDPSLRKDMPWTEDEEALLMRLCFAKQNQWAEICRQLHGRSYNDVQNR 388
BLAST of mRNA_P-wetherbeei_contig16915.1.1 vs. uniprot
Match: A0A6H5JMK3_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMK3_9PHAE) HSP 1 Score: 166 bits (419), Expect = 2.870e-43 Identity = 81/159 (50.94%), Postives = 105/159 (66.04%), Query Frame = 1
Query: 4 AMSRGGVEEYRPDDWTDAESARLKRLVERHGRAQWPAVAAHFPAKTAMQCMLHWRYTLNRNETIKGIGTWTADEDGRLQTLVTLFGQRWAKVAEHMPGRIPKQCRERYLNHLDPSLSKE-PWTPAEDAALLHWHDRYHNKFAEIGKHMPGRSYNALKNR 477
A+ VE + P DWT + RL+ LV+ G +W +A P KTA CMLHWR +N N +KG GTWTA+ED RL LV + G +W+ +A+H+PGRI KQCRERYLNHLDPSL K+ PWT E+A L+ N++AEI + + GRSYN +KNR
Sbjct: 969 AIKDANVEAHSPKDWTPELTKRLRDLVDELG-PKWSNIADKMPGKTATACMLHWRVGVNPNHMVKGSGTWTAEEDERLSKLVEVVGMKWSDLAKHIPGRIAKQCRERYLNHLDPSLRKDMPWTEDEEALLMRLCFAKQNQWAEICRQLHGRSYNDVKNR 1126
BLAST of mRNA_P-wetherbeei_contig16915.1.1 vs. uniprot
Match: A0A836CND7_9STRA (Homeodomain-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CND7_9STRA) HSP 1 Score: 149 bits (376), Expect = 1.030e-41 Identity = 63/111 (56.76%), Postives = 84/111 (75.68%), Query Frame = 1
Query: 145 MQCMLHWRYTLNRNETIKGIGTWTADEDGRLQTLVTLFGQRWAKVAEHMPGRIPKQCRERYLNHLDPSLSKEPWTPAEDAALLHWHDRYHNKFAEIGKHMPGRSYNALKNR 477
MQC+LHWRY LN ++ ++GIG+W+ +ED RL+ LVT+ G +WA VA MPGR+ KQCRERYLNHLDP L + PWTP E+ LL + + ++AEI + +PGRSYN +KNR
Sbjct: 1 MQCLLHWRYALNEDQQVRGIGSWSVEEDARLKALVTVHGCKWALVARSMPGRVAKQCRERYLNHLDPKLQRGPWTPEEEQVLLRLCEGQNRQWAEICRQLPGRSYNDVKNR 111
BLAST of mRNA_P-wetherbeei_contig16915.1.1 vs. uniprot
Match: A0A835YSH7_9STRA (Homeodomain-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSH7_9STRA) HSP 1 Score: 143 bits (360), Expect = 1.210e-39 Identity = 68/147 (46.26%), Postives = 90/147 (61.22%), Query Frame = 1
Query: 46 WTDAESARLKRLVERHGRAQWPAVAAHFPA-KTAMQCMLHWRYTLNRN--ETIKGIGTWTADEDGRLQTLVTLFGQRWAKVAEHMPGRIPKQCRERYLNHLDPSLSKEPWTPAEDAALLHWHDRYHNKFAEIGKHMPGRSYNALKNR 477
W+ ES RL+ L E G W +A +T C W + E G+G+W+ +ED +L+TLV +FG +WA++ HMPGR+ KQCRERYLNHLDPSL K PWTP EDA L H + +N +A+I + MPGR N +KNR
Sbjct: 1 WSPLESERLRVLAEAPGGGGWGDIARQLGGGRTEASCRARWGEMCDARAREGRAGVGSWSPEEDEKLRTLVGMFGAKWAQICMHMPGRVGKQCRERYLNHLDPSLKKTPWTPEEDALLTELHTKMNNSWADIARQMPGRCDNDVKNR 147
BLAST of mRNA_P-wetherbeei_contig16915.1.1 vs. uniprot
Match: G5A163_PHYSP (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5A163_PHYSP) HSP 1 Score: 145 bits (367), Expect = 4.850e-39 Identity = 66/143 (46.15%), Postives = 94/143 (65.73%), Query Frame = 1
Query: 46 WTDAESARLKRLVERHGRAQWPAVAAHFPAKTAMQCMLHWRYTLNRNETIKGIGTWTADEDGRLQTLVTLFGQRWAKVAEHMPGRIPKQCRERYLNHLDPSLSKEPWTPAEDAALLHWHDRYHNKFAEIGKHMPGRSYNALKN 474
WT AE ++L+ LVE HG W +A+ P +T +QC+ W TL+ ++ +KG GTWT ED L V G++W +VA +PGR+ QCRER+LNHLDPS++K PWT E+AAL ++Y ++ I + +PGRS NA+KN
Sbjct: 139 WTAAEKSKLRSLVETHGAKSWLFIASQLPGRTDLQCLHQWHRTLD-DKVVKGKGTWTESEDRLLLEKVEEIGRKWTQVAAFLPGRVGNQCRERFLNHLDPSINKAPWTAEEEAALTEAVEKYSTQWGLIAEKLPGRSGNAVKN 280
BLAST of mRNA_P-wetherbeei_contig16915.1.1 vs. uniprot
Match: A0A8N4F9T4_ELAGV (transcription factor MYB3R-5 isoform X7 n=2 Tax=Elaeis guineensis var. tenera TaxID=51953 RepID=A0A8N4F9T4_ELAGV) HSP 1 Score: 139 bits (351), Expect = 3.820e-37 Identity = 73/191 (38.22%), Postives = 105/191 (54.97%), Query Frame = 1
Query: 46 WTDAESARLKRLVERHGRAQWPAVAAHFPAKTAMQCMLHWRYTLNRNETIKGIGTWTADEDGRLQTLVTLFG-QRWAKVAEHMPGRIPKQCRERYLNHLDPSLSKEPWTPAEDAALLHWHDRYHNKFAEIGKHMPGRSYNALKNR*EERKTSDAFWRSCL------CL*CGCAFSDFKRPGFR*QGQKSLV 597
WTD E L + V++ W +A FP ++ +QC+ W+ LN E +KG TWT +ED R+ LV G ++W+ +A+ +PGRI KQCRER+ NHL+PS+ K+ WTP E+ L+H H Y NK+AEI K +PGR+ N++KN W + CL G F P F+ + V
Sbjct: 54 WTDKEDDLLVKAVKQFNGKNWKKIAELFPGRSDVQCLHRWQKVLNP-ELVKG--TWTKEEDDRIIKLVAKHGCKKWSVIAKSLPGRIGKQCRERWHNHLNPSIKKDAWTPEEEVTLIHAHQIYGNKWAEIAKLLPGRTDNSIKNH----------WNCSVKKKLGSCLASGIPSQPFGNPAFKLNSHQETV 231 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16915.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig16915.1.1 >prot_P-wetherbeei_contig16915.1.1 ID=prot_P-wetherbeei_contig16915.1.1|Name=mRNA_P-wetherbeei_contig16915.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=158bp MSRGGVEEYRPDDWTDAESARLKRLVERHGRAQWPAVAAHFPAKTAMQCMback to top mRNA from alignment at P-wetherbeei_contig16915:61..1117+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig16915.1.1 ID=mRNA_P-wetherbeei_contig16915.1.1|Name=mRNA_P-wetherbeei_contig16915.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1057bp|location=Sequence derived from alignment at P-wetherbeei_contig16915:61..1117+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig16915:61..1117+ >mRNA_P-wetherbeei_contig16915.1.1 ID=mRNA_P-wetherbeei_contig16915.1.1|Name=mRNA_P-wetherbeei_contig16915.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=474bp|location=Sequence derived from alignment at P-wetherbeei_contig16915:61..1117+ (Phaeothamnion wetherbeei SAG_119_79)back to top |