mRNA_P-wetherbeei_contig16909.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig16909.1.1
Unique NamemRNA_P-wetherbeei_contig16909.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig16909.1.1 vs. uniprot
Match: A0A523PH38_9PROT (ATP-dependent zinc metalloprotease FtsH n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A523PH38_9PROT)

HSP 1 Score: 643 bits (1658), Expect = 2.670e-227
Identity = 319/364 (87.64%), Postives = 342/364 (93.96%), Query Frame = 1
Query:    1 MARNLVLWIVIALVLMLVFQNFTPRHGASRPIDYSDFVAEAKSGRVAKVVLDGQTIEMEMHDGSRLFTYSPETDNSPLIGTLLENNVRIEAQAPDRQGLLMQIFISWFPFLLLIAVWIYLMRQMQGGAGGRGAMSFGKSRARLLGEDQVRINFNDVAGVDEAKEEVKELVDFLKDPGKFQKLGGKIPRGVLMVGSPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKHAPCIIFIDEIDAVGRHRGAGLGGGHDEREQTLNQLLVEMDGFDGNEGVIIIAATNRPDVLDPALLRPGRFDRQVVVPLPDIRGREQILKVHMRKVPISEDVKPGILARGTPGFSGADLA 1092
            MARN++LW+VIALVLMLVFQNFTP++G S  ++YSDF+ E KSGRVAKVVLDG TIE+E HDG+RL++YSPE+DNS LIG LL+NNVRIEAQ P+RQG+LMQIFISWFPFLLLI VWIY MRQMQGG  GRGA+SFGKSRARLLGEDQVRI FNDVAGVDEAK EVKELVDFL+DPGKFQKLGGKIP GVLMVG PGTGKTLLA+AIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKHAPCIIFIDEIDAVGRHRGAGLGGGHDEREQTLNQLLVEMDGF+GNEGVI+IAATNRPDVLDPALLRPGRFDRQVVV LPDIRGREQILKVHMRKVPI +DVK  +LARGTPGFSGADLA
Sbjct:    4 MARNMILWVVIALVLMLVFQNFTPKNGTSEELEYSDFIKEVKSGRVAKVVLDGPTIEIETHDGNRLYSYSPESDNSALIGLLLDNNVRIEAQPPERQGVLMQIFISWFPFLLLIGVWIYFMRQMQGGGSGRGALSFGKSRARLLGEDQVRITFNDVAGVDEAKAEVKELVDFLQDPGKFQKLGGKIPSGVLMVGLPGTGKTLLARAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKHAPCIIFIDEIDAVGRHRGAGLGGGHDEREQTLNQLLVEMDGFEGNEGVIVIAATNRPDVLDPALLRPGRFDRQVVVMLPDIRGREQILKVHMRKVPIDDDVKTSVLARGTPGFSGADLA 367          
BLAST of mRNA_P-wetherbeei_contig16909.1.1 vs. uniprot
Match: A0A1Z9UE28_9GAMM (ATP-dependent zinc metalloprotease FtsH n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A1Z9UE28_9GAMM)

HSP 1 Score: 629 bits (1622), Expect = 8.380e-222
Identity = 311/364 (85.44%), Postives = 342/364 (93.96%), Query Frame = 1
Query:    1 MARNLVLWIVIALVLMLVFQNFTPRHGASRPIDYSDFVAEAKSGRVAKVVLDGQTIEMEMHDGSRLFTYSPETDNSPLIGTLLENNVRIEAQAPDRQGLLMQIFISWFPFLLLIAVWIYLMRQMQGGAGGRGAMSFGKSRARLLGEDQVRINFNDVAGVDEAKEEVKELVDFLKDPGKFQKLGGKIPRGVLMVGSPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKHAPCIIFIDEIDAVGRHRGAGLGGGHDEREQTLNQLLVEMDGFDGNEGVIIIAATNRPDVLDPALLRPGRFDRQVVVPLPDIRGREQILKVHMRKVPISEDVKPGILARGTPGFSGADLA 1092
            MARN +LW VIALVLM+VFQNF+P++  SR +DYSDFV+EAKSGR+AKVV+DG  +E ++HDG+   TYSPETDN+P+IG LLENNVRIEA+ P+RQ LL QIFISWFPFLLLI VWIYLMRQMQGGAGGRGAMSFGKS+A+LLGED ++I F+DVAGV+EAKEEVKELVDFLKDP KFQKLGGKIPRGVLMVGSPGTGKT+LAKAIAGEA+VPFFTISGSDFVEMFVGVGASRVRDMFEQAKK APCIIFIDEIDAVGRHRGAGLGGGHDEREQTLNQLLVEMDGF+GN+GVI+IAATNRPDVLDPALLRPGRFDRQVVVPLPDIRGREQILKVHMRKVPIS++V+  ILARGTPGFSGADLA
Sbjct:    1 MARNFLLWAVIALVLMMVFQNFSPQNNTSRSLDYSDFVSEAKSGRIAKVVIDGSKVEYQLHDGTWSSTYSPETDNAPMIGMLLENNVRIEAKKPERQSLLTQIFISWFPFLLLIGVWIYLMRQMQGGAGGRGAMSFGKSKAKLLGEDDIKITFSDVAGVEEAKEEVKELVDFLKDPSKFQKLGGKIPRGVLMVGSPGTGKTMLAKAIAGEAQVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKRAPCIIFIDEIDAVGRHRGAGLGGGHDEREQTLNQLLVEMDGFEGNDGVIVIAATNRPDVLDPALLRPGRFDRQVVVPLPDIRGREQILKVHMRKVPISKNVEADILARGTPGFSGADLA 364          
BLAST of mRNA_P-wetherbeei_contig16909.1.1 vs. uniprot
Match: A0A1Z8WU73_9GAMM (ATP-dependent zinc metalloprotease FtsH n=1 Tax=Methylococcaceae bacterium TMED69 TaxID=1986766 RepID=A0A1Z8WU73_9GAMM)

HSP 1 Score: 628 bits (1620), Expect = 1.690e-221
Identity = 308/364 (84.62%), Postives = 339/364 (93.13%), Query Frame = 1
Query:    1 MARNLVLWIVIALVLMLVFQNFTPRHGASRPIDYSDFVAEAKSGRVAKVVLDGQTIEMEMHDGSRLFTYSPETDNSPLIGTLLENNVRIEAQAPDRQGLLMQIFISWFPFLLLIAVWIYLMRQMQGGAGGRGAMSFGKSRARLLGEDQVRINFNDVAGVDEAKEEVKELVDFLKDPGKFQKLGGKIPRGVLMVGSPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKHAPCIIFIDEIDAVGRHRGAGLGGGHDEREQTLNQLLVEMDGFDGNEGVIIIAATNRPDVLDPALLRPGRFDRQVVVPLPDIRGREQILKVHMRKVPISEDVKPGILARGTPGFSGADLA 1092
            MARN+VLW++IALV+M++FQ+F+P+  ++  + YSDFV+  KSGRVA V +DG  IE++MHDGSR+FT+SPETDN PLIG+LL+N VRIEA  P+RQ LL QIFISWFPFLLLI VWIY+MRQMQGG GGRGA+SFGKSRA+LL +DQVR+ FNDVAGV+EAKEEVKELVDFLKDPGKFQKLGGKIPRGVLMVGSPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKHAPCI FIDEIDAVGRHRGAGLGGGHDEREQTLNQLLVEMDGF+GNEGVI+IAATNRPDVLDPALLRPGRFDRQVVVPLPDIRGREQILKVHMRKVP ++DVK  ILARGTPGFSGADLA
Sbjct:    1 MARNIVLWVIIALVMMIIFQSFSPQRTSNSSLSYSDFVSAVKSGRVASVKIDGSQIELQMHDGSRMFTFSPETDNGPLIGSLLDNQVRIEATPPERQSLLTQIFISWFPFLLLIGVWIYVMRQMQGGGGGRGALSFGKSRAKLLADDQVRVTFNDVAGVEEAKEEVKELVDFLKDPGKFQKLGGKIPRGVLMVGSPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKHAPCITFIDEIDAVGRHRGAGLGGGHDEREQTLNQLLVEMDGFEGNEGVIVIAATNRPDVLDPALLRPGRFDRQVVVPLPDIRGREQILKVHMRKVPSADDVKASILARGTPGFSGADLA 364          
BLAST of mRNA_P-wetherbeei_contig16909.1.1 vs. uniprot
Match: A0A351MBN1_9GAMM (ATP-dependent zinc metalloprotease FtsH n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A351MBN1_9GAMM)

HSP 1 Score: 603 bits (1556), Expect = 9.030e-212
Identity = 293/364 (80.49%), Postives = 332/364 (91.21%), Query Frame = 1
Query:    1 MARNLVLWIVIALVLMLVFQNFTPRHGASRPIDYSDFVAEAKSGRVAKVVLDGQTIEMEMHDGSRLFTYSPETDNSPLIGTLLENNVRIEAQAPDRQGLLMQIFISWFPFLLLIAVWIYLMRQMQGGAGGRGAMSFGKSRARLLGEDQVRINFNDVAGVDEAKEEVKELVDFLKDPGKFQKLGGKIPRGVLMVGSPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKHAPCIIFIDEIDAVGRHRGAGLGGGHDEREQTLNQLLVEMDGFDGNEGVIIIAATNRPDVLDPALLRPGRFDRQVVVPLPDIRGREQILKVHMRKVPISEDVKPGILARGTPGFSGADLA 1092
            M +N+VLW+VIALVLM+VFQ F PR G +  +DYS+F+A+ ++GRVA+VV+DG  ++    + +R  TYSPE+DN  ++G LLEN VRI+A+ PD+QGLLMQIFISWFPFLLLI VW++ MRQMQGG  GRGA+SFGKSRARLL EDQVR+ F DVAGVDEAK+EV ELV+FL+DPGKFQKLGGKIPRGVLMVGSPGTGKTLLAKAIAGEAKVPFF+ISGSDFVEMFVGVGASRVRDMFEQ KKHAPCIIFIDEIDAVGRHRGAGLGGGHDEREQTLNQLLVEMDGF+G+EGVI+IAATNRPDVLDPALLRPGRFDRQVVVPLPD+RGREQILKVHMRKVP +++VKPG+LARGTPGFSGADLA
Sbjct:    1 MTKNIVLWVVIALVLMMVFQTFGPRQGNALTVDYSEFIADVRAGRVAEVVIDGNVVQGRRDNNNRFVTYSPESDNRAMVGELLENGVRIQARPPDQQGLLMQIFISWFPFLLLIGVWVFFMRQMQGGGAGRGALSFGKSRARLLSEDQVRVTFADVAGVDEAKQEVSELVEFLRDPGKFQKLGGKIPRGVLMVGSPGTGKTLLAKAIAGEAKVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKHAPCIIFIDEIDAVGRHRGAGLGGGHDEREQTLNQLLVEMDGFEGHEGVIVIAATNRPDVLDPALLRPGRFDRQVVVPLPDVRGREQILKVHMRKVPTADNVKPGLLARGTPGFSGADLA 364          
BLAST of mRNA_P-wetherbeei_contig16909.1.1 vs. uniprot
Match: A0A369C3I6_9GAMM (ATP-dependent zinc metalloprotease FtsH n=1 Tax=Thioalbus denitrificans TaxID=547122 RepID=A0A369C3I6_9GAMM)

HSP 1 Score: 598 bits (1541), Expect = 1.390e-209
Identity = 297/364 (81.59%), Postives = 332/364 (91.21%), Query Frame = 1
Query:    1 MARNLVLWIVIALVLMLVFQNFTPRHGASRPIDYSDFVAEAKSGRVAKVVLDGQTIEMEMHDGSRLFTYSPETDNSPLIGTLLENNVRIEAQAPDRQGLLMQIFISWFPFLLLIAVWIYLMRQMQGGAGGRGAMSFGKSRARLLGEDQVRINFNDVAGVDEAKEEVKELVDFLKDPGKFQKLGGKIPRGVLMVGSPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKHAPCIIFIDEIDAVGRHRGAGLGGGHDEREQTLNQLLVEMDGFDGNEGVIIIAATNRPDVLDPALLRPGRFDRQVVVPLPDIRGREQILKVHMRKVPISEDVKPGILARGTPGFSGADLA 1092
            MA+N++LW+VIA+VLM VF NF+PR  A++P+DYS F+A+ KSG+V KV++DG+ I+    +G R  TYSP   ++ L+G LLENNV IEA+ P++Q LLMQIFISWFP LLLI VWI+ MRQMQGG  GRGAMSFGKSRARLLGEDQV++ F DVAGV+EAKEEVKELVDFL+DPGKFQKLGGKIPRGVLMVG+PGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKHAPCIIFIDEIDAVGRHRGAGLGGGHDEREQTLNQLLVEMDGF+GNEGVI+IAATNRPDVLDPALLRPGRFDRQVVVPLPDIRGREQIL+VHMRKVPIS+DV+P  +ARGTPGFSGADLA
Sbjct:    1 MAKNIILWVVIAVVLMSVFNNFSPRQPANQPLDYSQFIADVKSGQVQKVLIDGRNIQGVTVNGERFSTYSP--GDAGLVGDLLENNVTIEARPPEQQSLLMQIFISWFPMLLLIGVWIFFMRQMQGGGSGRGAMSFGKSRARLLGEDQVKVTFADVAGVEEAKEEVKELVDFLRDPGKFQKLGGKIPRGVLMVGTPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKHAPCIIFIDEIDAVGRHRGAGLGGGHDEREQTLNQLLVEMDGFEGNEGVIVIAATNRPDVLDPALLRPGRFDRQVVVPLPDIRGREQILRVHMRKVPISDDVRPEYIARGTPGFSGADLA 362          
BLAST of mRNA_P-wetherbeei_contig16909.1.1 vs. uniprot
Match: A0A4R2L6M3_9GAMM (ATP-dependent zinc metalloprotease FtsH n=4 Tax=Plasticicumulans TaxID=1400827 RepID=A0A4R2L6M3_9GAMM)

HSP 1 Score: 592 bits (1527), Expect = 2.190e-207
Identity = 288/364 (79.12%), Postives = 326/364 (89.56%), Query Frame = 1
Query:    1 MARNLVLWIVIALVLMLVFQNFTPRHGASRPIDYSDFVAEAKSGRVAKVVLDGQTIEMEMHDGSRLFTYSPETDNSPLIGTLLENNVRIEAQAPDRQGLLMQIFISWFPFLLLIAVWIYLMRQMQGGAGGRGAMSFGKSRARLLGEDQVRINFNDVAGVDEAKEEVKELVDFLKDPGKFQKLGGKIPRGVLMVGSPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKHAPCIIFIDEIDAVGRHRGAGLGGGHDEREQTLNQLLVEMDGFDGNEGVIIIAATNRPDVLDPALLRPGRFDRQVVVPLPDIRGREQILKVHMRKVPISEDVKPGILARGTPGFSGADLA 1092
            M +N++LW+VIA+VLM VF +F PR   S+ + YS F+ E K GRVA V +DG++I+     G +  TYSPETDN  ++GTLLENNV IE + P++Q LLMQIFISWFP LLLI VW++ +RQMQGGAGGRGAMSFGKSRAR++ EDQ+++ F DVAGVDEAKEEV ELV+FL+DPGKFQ+LGGKIPRGVLMVGSPGTGKTLLAKAIAGEAKVPFF+ISGSDFVEMFVGVGASRVRDMFEQAKKHAPCIIFIDEIDAVGRHRGAGLGGGHDEREQTLNQLLVEMDGF+GNEG+I+IAATNRPDVLDPALLRPGRFDRQVVVPLPD+RGREQILKVHMRKVPI+ DVKP ++ARGTPGFSGADLA
Sbjct:    4 MVKNILLWVVIAVVLMSVFNSFGPRTAPSQQLSYSQFLEEVKQGRVAHVAIDGRSIQGRTSTGEKFVTYSPETDNKAMVGTLLENNVDIEGRPPEQQSLLMQIFISWFPMLLLIGVWVFFLRQMQGGAGGRGAMSFGKSRARMMSEDQIKVTFADVAGVDEAKEEVAELVEFLRDPGKFQRLGGKIPRGVLMVGSPGTGKTLLAKAIAGEAKVPFFSISGSDFVEMFVGVGASRVRDMFEQAKKHAPCIIFIDEIDAVGRHRGAGLGGGHDEREQTLNQLLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVPLPDVRGREQILKVHMRKVPIAGDVKPSLIARGTPGFSGADLA 367          
BLAST of mRNA_P-wetherbeei_contig16909.1.1 vs. uniprot
Match: A0A1T2L9I9_9GAMM (ATP-dependent zinc metalloprotease FtsH n=2 Tax=Gammaproteobacteria incertae sedis TaxID=118884 RepID=A0A1T2L9I9_9GAMM)

HSP 1 Score: 592 bits (1525), Expect = 4.260e-207
Identity = 289/364 (79.40%), Postives = 327/364 (89.84%), Query Frame = 1
Query:    1 MARNLVLWIVIALVLMLVFQNFTPRHGASRPIDYSDFVAEAKSGRVAKVVLDGQTIEMEMHDGSRLFTYSPETDNSPLIGTLLENNVRIEAQAPDRQGLLMQIFISWFPFLLLIAVWIYLMRQMQGGAGGRGAMSFGKSRARLLGEDQVRINFNDVAGVDEAKEEVKELVDFLKDPGKFQKLGGKIPRGVLMVGSPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKHAPCIIFIDEIDAVGRHRGAGLGGGHDEREQTLNQLLVEMDGFDGNEGVIIIAATNRPDVLDPALLRPGRFDRQVVVPLPDIRGREQILKVHMRKVPISEDVKPGILARGTPGFSGADLA 1092
            MA+N++LW+VIA++LM VF NF+     ++P+ YS F+ + K GR+  V+++G+TI      G R+ TYSPETDN  LIG LL NNV IEAQ P++Q +LMQIFISWFP LLLI VWI+ MRQMQGG GGRGAMSFGKS+AR+LGEDQV++NF DVAGV+EAKEEV ELV+FL+DPGKFQKLGGKIPRGVLMVGSPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKHAPCIIFIDEIDAVGRHRGAGLGGGHDEREQTLNQLLVEMDGF+GNEGVI+IAATNRPDVLDPALLRPGRFDRQVVVPLPD+RGREQIL+VHMRK+P+ ++VKP I+ARGTPGFSGADLA
Sbjct:    4 MAKNVLLWVVIAIILMSVFNNFSTTQQHAQPLPYSQFINDVKDGRIQSVLIEGRTITGSSIGGERIKTYSPETDNRSLIGDLLANNVMIEAQPPEQQSVLMQIFISWFPMLLLIGVWIFFMRQMQGGGGGRGAMSFGKSKARMLGEDQVKVNFGDVAGVEEAKEEVGELVEFLRDPGKFQKLGGKIPRGVLMVGSPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKHAPCIIFIDEIDAVGRHRGAGLGGGHDEREQTLNQLLVEMDGFEGNEGVIVIAATNRPDVLDPALLRPGRFDRQVVVPLPDVRGREQILRVHMRKLPVDDNVKPAIIARGTPGFSGADLA 367          
BLAST of mRNA_P-wetherbeei_contig16909.1.1 vs. uniprot
Match: W6M618_9GAMM (ATP-dependent zinc metalloprotease FtsH n=11 Tax=Gammaproteobacteria TaxID=1236 RepID=W6M618_9GAMM)

HSP 1 Score: 587 bits (1513), Expect = 2.300e-205
Identity = 284/364 (78.02%), Postives = 324/364 (89.01%), Query Frame = 1
Query:    1 MARNLVLWIVIALVLMLVFQNFTPRHGASRPIDYSDFVAEAKSGRVAKVVLDGQTIEMEMHDGSRLFTYSPETDNSPLIGTLLENNVRIEAQAPDRQGLLMQIFISWFPFLLLIAVWIYLMRQMQGGAGGRGAMSFGKSRARLLGEDQVRINFNDVAGVDEAKEEVKELVDFLKDPGKFQKLGGKIPRGVLMVGSPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKHAPCIIFIDEIDAVGRHRGAGLGGGHDEREQTLNQLLVEMDGFDGNEGVIIIAATNRPDVLDPALLRPGRFDRQVVVPLPDIRGREQILKVHMRKVPISEDVKPGILARGTPGFSGADLA 1092
            M +N++LW+VIA+VLM VF +F P+   S  + YS F+ +AK GR+A+V +DG+ I      G R  TYSPETDNSP+IG LL + V IE Q P++QGLLMQIFISWFP LLLI +W++ +RQMQGG  GRGAMSFGKSRAR++ EDQ+++ F DVAGVDEAKEEV ELV+FL+DPGKFQKLGGKIPRGVLMVGSPGTGKTLLAKAIAGEAKVPFF+ISGSDFVEMFVGVGASRVRDMFEQAKKHAPCIIFIDEIDAVGRHRGAGLGGGHDEREQTLNQLLVEMDGF+GNEG+I+IAATNRPDVLDPALLRPGRFDRQVVVPLPD+RGREQILKVHMRKVP++++VKP ++ARGTPGFSGADLA
Sbjct:    1 MVKNILLWVVIAVVLMSVFNSFGPKVAPSAQMSYSQFLQDAKQGRIAQVTIDGRAIMGRTSGGERFTTYSPETDNSPMIGELLNHGVEIEGQPPEKQGLLMQIFISWFPMLLLIGIWVFFLRQMQGGGAGRGAMSFGKSRARMMSEDQIKVTFADVAGVDEAKEEVAELVEFLRDPGKFQKLGGKIPRGVLMVGSPGTGKTLLAKAIAGEAKVPFFSISGSDFVEMFVGVGASRVRDMFEQAKKHAPCIIFIDEIDAVGRHRGAGLGGGHDEREQTLNQLLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVPLPDVRGREQILKVHMRKVPLADNVKPSVIARGTPGFSGADLA 364          
BLAST of mRNA_P-wetherbeei_contig16909.1.1 vs. uniprot
Match: A0A523KB38_9GAMM (ATP-dependent zinc metalloprotease FtsH (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A523KB38_9GAMM)

HSP 1 Score: 585 bits (1507), Expect = 7.270e-205
Identity = 291/364 (79.95%), Postives = 322/364 (88.46%), Query Frame = 1
Query:    1 MARNLVLWIVIALVLMLVFQNFTPRHGASRPIDYSDFVAEAKSGRVAKVVLDGQTIEMEMHDGSRLFTYSPETDNSPLIGTLLENNVRIEAQAPDRQGLLMQIFISWFPFLLLIAVWIYLMRQMQGGAGGRGAMSFGKSRARLLGEDQVRINFNDVAGVDEAKEEVKELVDFLKDPGKFQKLGGKIPRGVLMVGSPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKHAPCIIFIDEIDAVGRHRGAGLGGGHDEREQTLNQLLVEMDGFDGNEGVIIIAATNRPDVLDPALLRPGRFDRQVVVPLPDIRGREQILKVHMRKVPISEDVKPGILARGTPGFSGADLA 1092
            MA+NL+LW+VIALVLM VF NF  R      +DYS F+A+ K+GRV KVV++ + I+  M +     TY+PETDN  +IG LL+  V IEAQ P++Q +LMQIFISWFP LLLI VWI+ MRQMQGGAGGRGAMSFGKSRARLLGEDQV++ F DVAGV+EAK EV ELVDFLKDP K+QKLGGKIPRGVLMVG+PGTGKTL+A+AIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKHAPCIIFIDEIDAVGRHRGAGLGGGHDEREQTLNQLLVEMDGF+GNEGVI+IAATNRPDVLDPALLRPGRFDRQVVVPLPDIRGREQILKVHMRKVP+ +DV P I+ARGTPGFSGADLA
Sbjct:    1 MAKNLILWVVIALVLMSVFNNFGQRRATPHEVDYSQFMADVKNGRVQKVVIEDRHIQGLMQNNDHFSTYTPETDNRSMIGELLDAGVVIEAQPPEQQSVLMQIFISWFPMLLLIGVWIFFMRQMQGGAGGRGAMSFGKSRARLLGEDQVKVTFADVAGVEEAKAEVSELVDFLKDPAKYQKLGGKIPRGVLMVGAPGTGKTLIARAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKHAPCIIFIDEIDAVGRHRGAGLGGGHDEREQTLNQLLVEMDGFEGNEGVIVIAATNRPDVLDPALLRPGRFDRQVVVPLPDIRGREQILKVHMRKVPLDKDVDPHIIARGTPGFSGADLA 364          
BLAST of mRNA_P-wetherbeei_contig16909.1.1 vs. uniprot
Match: A0A1Q2SKY7_9GAMM (ATP-dependent zinc metalloprotease FtsH n=1 Tax=Candidatus Nitrosoglobus terrae TaxID=1630141 RepID=A0A1Q2SKY7_9GAMM)

HSP 1 Score: 580 bits (1494), Expect = 1.540e-202
Identity = 289/364 (79.40%), Postives = 325/364 (89.29%), Query Frame = 1
Query:    1 MARNLVLWIVIALVLMLVFQNFTPRHGASRPIDYSDFVAEAKSGRVAKVVLDGQTIEMEMHDGSRLFTYSPETDNSPLIGTLLENNVRIEAQAPDRQGLLMQIFISWFPFLLLIAVWIYLMRQMQGGAGGRGAMSFGKSRARLLGEDQVRINFNDVAGVDEAKEEVKELVDFLKDPGKFQKLGGKIPRGVLMVGSPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKHAPCIIFIDEIDAVGRHRGAGLGGGHDEREQTLNQLLVEMDGFDGNEGVIIIAATNRPDVLDPALLRPGRFDRQVVVPLPDIRGREQILKVHMRKVPISEDVKPGILARGTPGFSGADLA 1092
            MA+N++LW+VIALVLM VF +F PR  +   +DYS F+A+ KSG+V KV++DG++I  E  +G R  TYSP  D   LIG LL+N V IEA+A +  GLLMQ+FISWFP LLLIAVWI+ MRQMQGGAGGRGA+SFGKSRAR+L E+QV+I F DVAG DEAKEEVKELV+FL+DPG+FQKLGGKIPRGVLMVGSPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFE AKKHAPCIIFIDEIDAVGR RGAGLGGGHDEREQTLNQLLVEMDGF+GNEGVI+IAATNRPDVLDPALLRPGRFDRQVVV LPDIRGREQILKVH+RKVP+++DV+P ++ARGTPGFSGADLA
Sbjct:    1 MAKNIILWVVIALVLMSVFNSFGPRQVSGHQLDYSRFIADVKSGQVNKVIIDGRSISGETKEGKRFVTYSPGNDPG-LIGDLLDNGVIIEARAEEGNGLLMQVFISWFPMLLLIAVWIFFMRQMQGGAGGRGALSFGKSRARMLSEEQVKITFGDVAGCDEAKEEVKELVEFLRDPGRFQKLGGKIPRGVLMVGSPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFENAKKHAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFEGNEGVIVIAATNRPDVLDPALLRPGRFDRQVVVSLPDIRGREQILKVHLRKVPVAKDVEPALIARGTPGFSGADLA 363          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16909.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A523PH38_9PROT2.670e-22787.64ATP-dependent zinc metalloprotease FtsH n=1 Tax=Pr... [more]
A0A1Z9UE28_9GAMM8.380e-22285.44ATP-dependent zinc metalloprotease FtsH n=2 Tax=Ga... [more]
A0A1Z8WU73_9GAMM1.690e-22184.62ATP-dependent zinc metalloprotease FtsH n=1 Tax=Me... [more]
A0A351MBN1_9GAMM9.030e-21280.49ATP-dependent zinc metalloprotease FtsH n=1 Tax=Ga... [more]
A0A369C3I6_9GAMM1.390e-20981.59ATP-dependent zinc metalloprotease FtsH n=1 Tax=Th... [more]
A0A4R2L6M3_9GAMM2.190e-20779.12ATP-dependent zinc metalloprotease FtsH n=4 Tax=Pl... [more]
A0A1T2L9I9_9GAMM4.260e-20779.40ATP-dependent zinc metalloprotease FtsH n=2 Tax=Ga... [more]
W6M618_9GAMM2.300e-20578.02ATP-dependent zinc metalloprotease FtsH n=11 Tax=G... [more]
A0A523KB38_9GAMM7.270e-20579.95ATP-dependent zinc metalloprotease FtsH (Fragment)... [more]
A0A1Q2SKY7_9GAMM1.540e-20279.40ATP-dependent zinc metalloprotease FtsH n=1 Tax=Ca... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16909contigP-wetherbeei_contig16909:1..1092 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1469245.JFBG01000084_gene200
Preferred nameftsH
PFAMsAAA,FtsH_ext,Peptidase_M41
Model size1092
Max annot lvl135613|Chromatiales
KEGG koko:K03798
KEGG ModuleM00742
Hectar predicted targeting categorysignal peptide
Exons1
Evalue1.45e-200
EggNOG OGsCOG0465@1|root,COG0465@2|Bacteria,1MU6J@1224|Proteobacteria,1RME8@1236|Gammaproteobacteria,1WX7K@135613|Chromatiales
DescriptionActs as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
Cds size1092
COG categoryO
BRITEko00000,ko00002,ko01000,ko01002,ko03110
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186101.5504282-CDS-P-wetherbeei_contig16909:0..10921683186101.5504282-CDS-P-wetherbeei_contig16909:0..1092Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16909 1..1092 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16909.1.1prot_P-wetherbeei_contig16909.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig16909 1..1092 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig16909.1.1

>prot_P-wetherbeei_contig16909.1.1 ID=prot_P-wetherbeei_contig16909.1.1|Name=mRNA_P-wetherbeei_contig16909.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=364bp
MARNLVLWIVIALVLMLVFQNFTPRHGASRPIDYSDFVAEAKSGRVAKVV
LDGQTIEMEMHDGSRLFTYSPETDNSPLIGTLLENNVRIEAQAPDRQGLL
MQIFISWFPFLLLIAVWIYLMRQMQGGAGGRGAMSFGKSRARLLGEDQVR
INFNDVAGVDEAKEEVKELVDFLKDPGKFQKLGGKIPRGVLMVGSPGTGK
TLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKHAPCII
FIDEIDAVGRHRGAGLGGGHDEREQTLNQLLVEMDGFDGNEGVIIIAATN
RPDVLDPALLRPGRFDRQVVVPLPDIRGREQILKVHMRKVPISEDVKPGI
LARGTPGFSGADLA
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mRNA from alignment at P-wetherbeei_contig16909:1..1092-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig16909.1.1 ID=mRNA_P-wetherbeei_contig16909.1.1|Name=mRNA_P-wetherbeei_contig16909.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1092bp|location=Sequence derived from alignment at P-wetherbeei_contig16909:1..1092- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCTAGAAATCTCGTCCTCTGGATCGTCATCGCCCTGGTGCTGATGCT GGTCTTCCAGAATTTCACACCGCGGCATGGCGCATCCCGGCCCATCGACT ATTCGGATTTCGTGGCCGAGGCCAAGAGTGGGCGGGTGGCCAAAGTGGTG CTCGATGGCCAGACCATCGAGATGGAGATGCACGACGGCTCGCGTCTGTT TACCTATAGCCCCGAGACCGATAACAGTCCCCTGATCGGCACGCTGCTCG AAAACAACGTACGCATCGAGGCCCAGGCCCCTGACCGCCAGGGTCTGTTG ATGCAGATCTTCATTTCCTGGTTCCCCTTCCTGCTCCTGATAGCGGTGTG GATCTATCTGATGCGCCAGATGCAGGGCGGTGCCGGCGGTCGTGGCGCGA TGTCCTTCGGCAAGAGTCGTGCCCGCCTGTTGGGCGAAGATCAGGTCCGT ATCAACTTCAATGACGTGGCCGGCGTCGACGAAGCCAAGGAAGAGGTCAA GGAGCTGGTCGACTTCCTGAAGGATCCGGGTAAGTTCCAGAAGCTCGGTG GCAAGATTCCGCGTGGTGTGCTGATGGTCGGCTCGCCCGGTACCGGTAAG ACGCTGTTGGCGAAAGCCATCGCAGGCGAAGCCAAAGTGCCGTTCTTTAC CATTTCAGGGTCTGACTTCGTTGAAATGTTCGTCGGCGTGGGCGCGTCCC GCGTGCGTGACATGTTCGAACAGGCCAAGAAGCATGCGCCGTGCATTATC TTCATCGACGAAATCGATGCGGTCGGTCGCCATCGCGGCGCCGGTCTCGG TGGTGGGCACGATGAACGCGAACAGACCTTGAACCAATTGCTGGTCGAGA TGGACGGTTTCGACGGTAATGAAGGGGTCATCATCATTGCCGCCACCAAC CGGCCTGACGTGCTCGACCCGGCGCTGTTGCGTCCCGGTCGTTTTGACCG CCAGGTGGTGGTGCCGCTGCCGGATATTCGCGGTCGCGAGCAGATCCTGA AAGTGCATATGCGTAAGGTGCCGATCTCGGAAGACGTCAAGCCGGGCATT CTGGCGCGCGGTACGCCGGGCTTTTCGGGCGCCGATCTGGCC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig16909:1..1092-

>mRNA_P-wetherbeei_contig16909.1.1 ID=mRNA_P-wetherbeei_contig16909.1.1|Name=mRNA_P-wetherbeei_contig16909.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1092bp|location=Sequence derived from alignment at P-wetherbeei_contig16909:1..1092- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCTAGAAATCTCGTCCTCTGGATCGTCATCGCCCTGGTGCTGATGCT
GGTCTTCCAGAATTTCACACCGCGGCATGGCGCATCCCGGCCCATCGACT
ATTCGGATTTCGTGGCCGAGGCCAAGAGTGGGCGGGTGGCCAAAGTGGTG
CTCGATGGCCAGACCATCGAGATGGAGATGCACGACGGCTCGCGTCTGTT
TACCTATAGCCCCGAGACCGATAACAGTCCCCTGATCGGCACGCTGCTCG
AAAACAACGTACGCATCGAGGCCCAGGCCCCTGACCGCCAGGGTCTGTTG
ATGCAGATCTTCATTTCCTGGTTCCCCTTCCTGCTCCTGATAGCGGTGTG
GATCTATCTGATGCGCCAGATGCAGGGCGGTGCCGGCGGTCGTGGCGCGA
TGTCCTTCGGCAAGAGTCGTGCCCGCCTGTTGGGCGAAGATCAGGTCCGT
ATCAACTTCAATGACGTGGCCGGCGTCGACGAAGCCAAGGAAGAGGTCAA
GGAGCTGGTCGACTTCCTGAAGGATCCGGGTAAGTTCCAGAAGCTCGGTG
GCAAGATTCCGCGTGGTGTGCTGATGGTCGGCTCGCCCGGTACCGGTAAG
ACGCTGTTGGCGAAAGCCATCGCAGGCGAAGCCAAAGTGCCGTTCTTTAC
CATTTCAGGGTCTGACTTCGTTGAAATGTTCGTCGGCGTGGGCGCGTCCC
GCGTGCGTGACATGTTCGAACAGGCCAAGAAGCATGCGCCGTGCATTATC
TTCATCGACGAAATCGATGCGGTCGGTCGCCATCGCGGCGCCGGTCTCGG
TGGTGGGCACGATGAACGCGAACAGACCTTGAACCAATTGCTGGTCGAGA
TGGACGGTTTCGACGGTAATGAAGGGGTCATCATCATTGCCGCCACCAAC
CGGCCTGACGTGCTCGACCCGGCGCTGTTGCGTCCCGGTCGTTTTGACCG
CCAGGTGGTGGTGCCGCTGCCGGATATTCGCGGTCGCGAGCAGATCCTGA
AAGTGCATATGCGTAAGGTGCCGATCTCGGAAGACGTCAAGCCGGGCATT
CTGGCGCGCGGTACGCCGGGCTTTTCGGGCGCCGATCTGGCC
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