mRNA_P-wetherbeei_contig16895.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig16895.1.1
Unique NamemRNA_P-wetherbeei_contig16895.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig16895.1.1 vs. uniprot
Match: A0A840AYH3_9HYPH (Uncharacterized protein n=1 Tax=Kaistia hirudinis TaxID=1293440 RepID=A0A840AYH3_9HYPH)

HSP 1 Score: 160 bits (404), Expect = 2.000e-48
Identity = 76/121 (62.81%), Postives = 95/121 (78.51%), Query Frame = 1
Query:    4 KAIAELGNYLHIYDFYVEKENIDEFIRLFNEFDYGGKNPMHESSAQAKDGAMCQDVDDPTHFWLIGEWKDIVEHARIRKILATELKPAFVGMIKGTGFVPKYAKVVSATPQAILDAASKKA 366
            + +A+ GN+LHIYDF VE    +EFI+LF EFDY   NPMH+SSAQ KDG +C+D ++P  F+LI EW DIVEHARIRKILA E+KPAFVG+I+G  FVPKY +VVS+TP  IL+AA+  A
Sbjct:    4 EPLAKKGNFLHIYDFIVEAGREEEFIKLFEEFDYSDGNPMHKSSAQVKDGVLCRDTENPQRFFLIAEWADIVEHARIRKILAEEIKPAFVGLIEGRKFVPKYVEVVSSTPDEILNAAAASA 124          
BLAST of mRNA_P-wetherbeei_contig16895.1.1 vs. uniprot
Match: UPI00124B10B1 (hypothetical protein n=1 Tax=Lacisediminimonas profundi TaxID=2603856 RepID=UPI00124B10B1)

HSP 1 Score: 159 bits (401), Expect = 5.040e-48
Identity = 75/118 (63.56%), Postives = 94/118 (79.66%), Query Frame = 1
Query:    1 MKAIAELGNYLHIYDFYVEKENID--EFIRLFNEFDYGGKNPMHESSAQAKDGAMCQDVDDPTHFWLIGEWKDIVEHARIRKILATELKPAFVGMIKGTGFVPKYAKVVSATPQAILD 348
            ++A+A  GN+ HIYDF + K+ +D  EF++LFN+FDY   NPMH+S+AQ KDG + QDV DP HFWLI EW+DI EHARIRKILA E+KPAFVGMI+G GFVP Y ++VSATP  IL+
Sbjct:    3 VEALASEGNFFHIYDFRI-KQGVDPKEFVKLFNQFDYSEGNPMHKSAAQVKDGVLVQDVKDPLHFWLIAEWRDIEEHARIRKILAEEIKPAFVGMIEGGGFVPHYGEIVSATPHDILN 119          
BLAST of mRNA_P-wetherbeei_contig16895.1.1 vs. uniprot
Match: A0A142LYW6_AMIAI (Uncharacterized protein n=10 Tax=Hyphomicrobiales TaxID=356 RepID=A0A142LYW6_AMIAI)

HSP 1 Score: 158 bits (400), Expect = 7.620e-48
Identity = 75/118 (63.56%), Postives = 92/118 (77.97%), Query Frame = 1
Query:    4 KAIAELGNYLHIYDFYVEKENIDEFIRLFNEFDYGGKNPMHESSAQAKDGAMCQDVDDPTHFWLIGEWKDIVEHARIRKILATELKPAFVGMIKGTGFVPKYAKVVSATPQAILDAAS 357
            + +A  GN+LHIYDF VE    DEF++LF EFDY   NPMH+S AQ KDG +C+D +DP  F+LI EW DIVEHA+IRK+LA ELKPAFVG+I+G  FVPKY +VVS+TP  IL+AAS
Sbjct:    4 EPLATKGNFLHIYDFRVEVGREDEFVQLFEEFDYSDGNPMHKSWAQVKDGVLCRDTEDPQRFFLIAEWSDIVEHAKIRKVLAEELKPAFVGLIEGRKFVPKYVEVVSSTPDEILNAAS 121          
BLAST of mRNA_P-wetherbeei_contig16895.1.1 vs. uniprot
Match: A0A521YL61_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521YL61_9PROT)

HSP 1 Score: 155 bits (391), Expect = 1.960e-46
Identity = 76/120 (63.33%), Postives = 90/120 (75.00%), Query Frame = 1
Query:   10 IAELGNYLHIYDFYVEKENIDEFIRLFNEFDYGGKNPMHESSAQAKDGAMCQDVDDPTHFWLIGEWKDIVEHARIRKILATELKPAFVGMIKGTGFVPKYAKVVSATPQAILDAASKKAA 369
            IA+ GN+LHIYDF ++  +++EFIRLFNEFDY   NPMH+S AQ KDGA+ QDV DPT FWLIGEW DI  HARIRK    E+KPAF+  + G  FVP Y KVVSATPQ ILD A ++ A
Sbjct:    6 IAKQGNFLHIYDFKIDPNHVEEFIRLFNEFDYSEANPMHKSPAQVKDGALVQDVADPTRFWLIGEWSDIEVHARIRKQFV-EMKPAFIRYVVGGKFVPAYGKVVSATPQEILDRAQRQGA 124          
BLAST of mRNA_P-wetherbeei_contig16895.1.1 vs. uniprot
Match: A0A345ZV11_9HYPH (ABM domain-containing protein n=2 Tax=Hyphomicrobiales TaxID=356 RepID=A0A345ZV11_9HYPH)

HSP 1 Score: 152 bits (385), Expect = 1.460e-45
Identity = 72/118 (61.02%), Postives = 89/118 (75.42%), Query Frame = 1
Query:    4 KAIAELGNYLHIYDFYVEKENIDEFIRLFNEFDYGGKNPMHESSAQAKDGAMCQDVDDPTHFWLIGEWKDIVEHARIRKILATELKPAFVGMIKGTGFVPKYAKVVSATPQAILDAAS 357
            + +A  GNYLHIYDF V+K + DEFIRLF EFDY   NPMH+S+AQ  DG +C+DV+DP  F+LI EW DI EHA+IRKILA ELKP F+  I+G  F+PKY +VVS+TP  IL  A+
Sbjct:    4 EPLATKGNYLHIYDFRVQKGHEDEFIRLFEEFDYSDGNPMHKSAAQVSDGVLCRDVEDPQRFFLIAEWSDIEEHAKIRKILANELKPEFIKYIEGGKFIPKYVQVVSSTPDEILQKAA 121          
BLAST of mRNA_P-wetherbeei_contig16895.1.1 vs. uniprot
Match: A0A1Y6C8W5_9HYPH (Antibiotic biosynthesis monooxygenase n=1 Tax=Tistlia consotensis USBA 355 TaxID=560819 RepID=A0A1Y6C8W5_9HYPH)

HSP 1 Score: 152 bits (384), Expect = 1.950e-45
Identity = 74/118 (62.71%), Postives = 89/118 (75.42%), Query Frame = 1
Query:    1 MKAIAELGNYLHIYDFYVEKENIDEFIRLFNEFDYGGKNPMHESSAQAKDGAMCQDVDDPTHFWLIGEWKDIVEHARIRKILATELKPAFVGMIKGTGFVPKYAKVVSATPQAILDAA 354
            M  +A+ GNYLHIYDF V   + +EFIRLF EFDY   NPMH+S AQ KDG +C+D +DP  F+LI EW DI EHARIRKILA E+KPAF+  I+G  FVPKY +VVS+TPQ +LD A
Sbjct:    3 MVPLAKSGNYLHIYDFRVLPGHEEEFIRLFEEFDYSDGNPMHKSPAQVKDGVLCRDTEDPGRFFLIAEWADIEEHARIRKILAEEIKPAFIKYIEGGKFVPKYVQVVSSTPQHLLDKA 120          
BLAST of mRNA_P-wetherbeei_contig16895.1.1 vs. uniprot
Match: A0A1W6ZY48_9HYPH (ABM domain-containing protein n=5 Tax=Hyphomicrobiales TaxID=356 RepID=A0A1W6ZY48_9HYPH)

HSP 1 Score: 149 bits (376), Expect = 3.430e-44
Identity = 71/119 (59.66%), Postives = 88/119 (73.95%), Query Frame = 1
Query:    4 KAIAELGNYLHIYDFYVEKENIDEFIRLFNEFDYGGKNPMHESSAQAKDGAMCQDVDDPTHFWLIGEWKDIVEHARIRKILATELKPAFVGMIKGTGFVPKYAKVVSATPQAILDAASK 360
            + IA  GNYLHIYDF V   + +EFIRLF EFDY   NPMH+SSAQ KDG +C+D +DP  F+LI EW DI EHA+IRKILA E+KP F+  I+G  F+PKY +VVS+TP  IL  A++
Sbjct:    4 EPIATKGNYLHIYDFKVMPGHEEEFIRLFEEFDYSDGNPMHKSSAQVKDGVLCRDTEDPQRFFLIAEWSDIEEHAKIRKILANEIKPEFIKYIEGGKFIPKYVEVVSSTPDEILQKAAE 122          
BLAST of mRNA_P-wetherbeei_contig16895.1.1 vs. uniprot
Match: UPI00082CC852 (antibiotic biosynthesis monooxygenase n=1 Tax=Novosphingobium naphthalenivorans TaxID=273168 RepID=UPI00082CC852)

HSP 1 Score: 148 bits (374), Expect = 6.700e-44
Identity = 70/116 (60.34%), Postives = 87/116 (75.00%), Query Frame = 1
Query:    1 MKAIAELGNYLHIYDFYVEKENIDEFIRLFNEFDYGGKNPMHESSAQAKDGAMCQDVDDPTHFWLIGEWKDIVEHARIRKILATELKPAFVGMIKGTGFVPKYAKVVSATPQAILD 348
            M+ +A  GNYLHIYDF VE    +EFI LF+EFDY   NPMH+S+AQ KDG +C+D  DP  F+LI EW DI EHARIR ILA E++PAF+ +I+G  FVP YA+VVS+TP  IL+
Sbjct:    3 MEPLATKGNYLHIYDFRVEPGREEEFIALFDEFDYSDGNPMHKSAAQVKDGVLCRDTTDPQRFFLIAEWSDIKEHARIRAILAEEIRPAFISLIEGRRFVPTYAEVVSSTPDHILN 118          
BLAST of mRNA_P-wetherbeei_contig16895.1.1 vs. uniprot
Match: A0A537RP54_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537RP54_9PROT)

HSP 1 Score: 147 bits (371), Expect = 1.920e-43
Identity = 71/117 (60.68%), Postives = 87/117 (74.36%), Query Frame = 1
Query:    4 KAIAELGNYLHIYDFYVEKENIDEFIRLFNEFDYGGKNPMHESSAQAKDGAMCQDVDDPTHFWLIGEWKDIVEHARIRKILATELKPAFVGMIKGTGFVPKYAKVVSATPQAILDAA 354
            + +A  GN+LHIYDF V   + DEFIRLF EFDY   NPMH+S+AQ KDG +C+DV+DP  F+LI EW DI EHARIRKILA ++KP F+  I G  FVPKY +VVS+TP+ IL  A
Sbjct:    4 EPLATKGNFLHIYDFRVAAGHEDEFIRLFEEFDYSDGNPMHKSAAQVKDGVLCRDVEDPQRFFLIAEWADIEEHARIRKILANDIKPEFIKHIVGGKFVPKYVEVVSSTPEEILKKA 120          
BLAST of mRNA_P-wetherbeei_contig16895.1.1 vs. uniprot
Match: A0A537SBI5_9PROT (ABM domain-containing protein n=2 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537SBI5_9PROT)

HSP 1 Score: 146 bits (368), Expect = 5.830e-43
Identity = 64/116 (55.17%), Postives = 87/116 (75.00%), Query Frame = 1
Query:   10 IAELGNYLHIYDFYVEKENIDEFIRLFNEFDYGGKNPMHESSAQAKDGAMCQDVDDPTHFWLIGEWKDIVEHARIRKILATELKPAFVGMIKGTGFVPKYAKVVSATPQAILDAAS 357
            +A  G+Y H+YDF V+    DEF+ LFN+FDYG  NP H S+AQ KDG +C+D ++P HF+LIGEW+DI EH RIR+ +A E++P FV +I+G  FVP YA++VS TPQ +LD A+
Sbjct:    6 LATKGHYFHVYDFKVKPGRGDEFVELFNKFDYGDNNPFHRSAAQVKDGVLCRDTENPDHFYLIGEWRDIEEHRRIREFVAREIRPEFVQLIEGGHFVPNYAEIVSMTPQEVLDKAA 121          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16895.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A840AYH3_9HYPH2.000e-4862.81Uncharacterized protein n=1 Tax=Kaistia hirudinis ... [more]
UPI00124B10B15.040e-4863.56hypothetical protein n=1 Tax=Lacisediminimonas pro... [more]
A0A142LYW6_AMIAI7.620e-4863.56Uncharacterized protein n=10 Tax=Hyphomicrobiales ... [more]
A0A521YL61_9PROT1.960e-4663.33Uncharacterized protein n=1 Tax=Betaproteobacteria... [more]
A0A345ZV11_9HYPH1.460e-4561.02ABM domain-containing protein n=2 Tax=Hyphomicrobi... [more]
A0A1Y6C8W5_9HYPH1.950e-4562.71Antibiotic biosynthesis monooxygenase n=1 Tax=Tist... [more]
A0A1W6ZY48_9HYPH3.430e-4459.66ABM domain-containing protein n=5 Tax=Hyphomicrobi... [more]
UPI00082CC8526.700e-4460.34antibiotic biosynthesis monooxygenase n=1 Tax=Novo... [more]
A0A537RP54_9PROT1.920e-4360.68Uncharacterized protein n=1 Tax=Alphaproteobacteri... [more]
A0A537SBI5_9PROT5.830e-4355.17ABM domain-containing protein n=2 Tax=Alphaproteob... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16895contigP-wetherbeei_contig16895:12..386 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1116369.KB890024_gene226
PFAMsABM
Model size375
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue5.08e-48
EggNOG OGs2F34Y@1|root,33VZN@2|Bacteria,1REIT@1224|Proteobacteria,2U7FZ@28211|Alphaproteobacteria
Cds size375
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186101.1821542-CDS-P-wetherbeei_contig16895:11..3861683186101.1821542-CDS-P-wetherbeei_contig16895:11..386Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16895 12..386 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16895.1.1prot_P-wetherbeei_contig16895.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig16895 12..386 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig16895.1.1

>prot_P-wetherbeei_contig16895.1.1 ID=prot_P-wetherbeei_contig16895.1.1|Name=mRNA_P-wetherbeei_contig16895.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=125bp
MKAIAELGNYLHIYDFYVEKENIDEFIRLFNEFDYGGKNPMHESSAQAKD
GAMCQDVDDPTHFWLIGEWKDIVEHARIRKILATELKPAFVGMIKGTGFV
PKYAKVVSATPQAILDAASKKAAA*
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mRNA from alignment at P-wetherbeei_contig16895:12..386+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig16895.1.1 ID=mRNA_P-wetherbeei_contig16895.1.1|Name=mRNA_P-wetherbeei_contig16895.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=375bp|location=Sequence derived from alignment at P-wetherbeei_contig16895:12..386+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAAAGCCATCGCAGAACTCGGCAACTACCTGCACATCTACGACTTCTA CGTCGAGAAGGAGAACATCGACGAGTTCATCCGCCTCTTCAACGAGTTCG ACTACGGCGGCAAGAACCCCATGCACGAATCCTCCGCCCAGGCCAAGGAC GGCGCGATGTGCCAGGACGTGGACGACCCGACGCACTTCTGGCTGATCGG CGAGTGGAAGGACATCGTCGAGCACGCGCGCATCCGCAAGATCCTCGCCA CCGAGCTCAAGCCCGCCTTCGTCGGCATGATCAAGGGCACCGGCTTCGTG CCCAAGTACGCCAAGGTCGTGTCGGCCACGCCGCAGGCGATCCTGGATGC GGCGAGCAAGAAGGCCGCGGCCTAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig16895:12..386+

>mRNA_P-wetherbeei_contig16895.1.1 ID=mRNA_P-wetherbeei_contig16895.1.1|Name=mRNA_P-wetherbeei_contig16895.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=375bp|location=Sequence derived from alignment at P-wetherbeei_contig16895:12..386+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAAAGCCATCGCAGAACTCGGCAACTACCTGCACATCTACGACTTCTA
CGTCGAGAAGGAGAACATCGACGAGTTCATCCGCCTCTTCAACGAGTTCG
ACTACGGCGGCAAGAACCCCATGCACGAATCCTCCGCCCAGGCCAAGGAC
GGCGCGATGTGCCAGGACGTGGACGACCCGACGCACTTCTGGCTGATCGG
CGAGTGGAAGGACATCGTCGAGCACGCGCGCATCCGCAAGATCCTCGCCA
CCGAGCTCAAGCCCGCCTTCGTCGGCATGATCAAGGGCACCGGCTTCGTG
CCCAAGTACGCCAAGGTCGTGTCGGCCACGCCGCAGGCGATCCTGGATGC
GGCGAGCAAGAAGGCCGCGGCCTAG
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