mRNA_P-wetherbeei_contig1687.7.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1687.7.1
Unique NamemRNA_P-wetherbeei_contig1687.7.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1687.7.1 vs. uniprot
Match: A0A352KFG0_9PROT (Nudix hydrolase domain-containing protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A352KFG0_9PROT)

HSP 1 Score: 190 bits (482), Expect = 1.230e-59
Identity = 90/135 (66.67%), Postives = 102/135 (75.56%), Query Frame = 1
Query:    7 RDYPERPWLAVGVVVWREDAVLLVRRAHAPRKGQWSIPGGMQELGETVRQAGIREVFEETGLEITIDGLIDVIDLILPDAAGLVQTHYTLIDFHGRCATADKFALCPGDDADAAQWTPYDRLDDYALWPETRRVI 411
            RDYP RPW  VGV+VWR D V+LVRR   PRKGQWSIPGGMQELGET R AGIREV EETGL I IDGLIDVIDLI+PD AG ++THYTLID++G C   +     PGDD DA  W  +  L +Y LWP+T+RVI
Sbjct:    4 RDYPARPWTGVGVIVWRGDEVVLVRRGKEPRKGQWSIPGGMQELGETARAAGIREVMEETGLAIAIDGLIDVIDLIVPDDAGRIRTHYTLIDYYGHCLE-EGVEPRPGDDVDACCWVSHVNLKEYGLWPQTQRVI 137          
BLAST of mRNA_P-wetherbeei_contig1687.7.1 vs. uniprot
Match: A0A353LQ32_9PROT (Phosphohydrolase n=6 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A353LQ32_9PROT)

HSP 1 Score: 173 bits (439), Expect = 5.500e-53
Identity = 81/137 (59.12%), Postives = 100/137 (72.99%), Query Frame = 1
Query:    1 QARDYPERPWLAVGVVVWREDAVLLVRRAHAPRKGQWSIPGGMQELGETVRQAGIREVFEETGLEITIDGLIDVIDLILPDAAGLVQTHYTLIDFHGRCATADKFALCPGDDADAAQWTPYDRLDDYALWPETRRVI 411
            + RD+P RPW+ VGVV++++D VLLVRRA  PR G WSIPGGMQELGET  QAGIREV EETG+ + IDGLID+ID+I+P+  G ++THYTLID+H      +  A    DD   A+W P D+L DY LW ET RVI
Sbjct:    7 EPRDFPTRPWVGVGVVIFKDDKVLLVRRAKPPRAGSWSIPGGMQELGETAAQAGIREVCEETGITVAIDGLIDIIDVIVPEDDGRIRTHYTLIDYHAHWLAGEPQAA---DDVSDARWVPLDKLADYRLWSETLRVI 140          
BLAST of mRNA_P-wetherbeei_contig1687.7.1 vs. uniprot
Match: A0A523FYK2_9PROT (NUDIX domain-containing protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A523FYK2_9PROT)

HSP 1 Score: 156 bits (394), Expect = 1.800e-46
Identity = 76/136 (55.88%), Postives = 90/136 (66.18%), Query Frame = 1
Query:    4 ARDYPERPWLAVGVVVWREDAVLLVRRAHAPRKGQWSIPGGMQELGETVRQAGIREVFEETGLEITIDGLIDVIDLILPDAAGLVQTHYTLIDFHGRCATADKFALCPGDDADAAQWTPYDRLDDYALWPETRRVI 411
            +RDYP RP + VG V+WR+D VLLVRR   P+ G+WS+PGG QELGET+ QA  REV EETGL I +  LIDVID I+PD  G ++ HYTL+DF  R    D     PGDD  A  W   + L DY LW ET RVI
Sbjct:    2 SRDYPTRPLVGVGAVIWRDDKVLLVRRGKPPKDGEWSLPGGAQELGETILQALTREVQEETGLTIKVVALIDVIDAIIPDKDGNIRNHYTLVDFAARWVGGD---ARPGDDVTAVCWATLEELSDYGLWQETSRVI 134          
BLAST of mRNA_P-wetherbeei_contig1687.7.1 vs. uniprot
Match: A0A6A7KMU7_9PROT (NUDIX domain-containing protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6A7KMU7_9PROT)

HSP 1 Score: 154 bits (388), Expect = 1.470e-45
Identity = 73/136 (53.68%), Postives = 93/136 (68.38%), Query Frame = 1
Query:    4 ARDYPERPWLAVGVVVWREDAVLLVRRAHAPRKGQWSIPGGMQELGETVRQAGIREVFEETGLEITIDGLIDVIDLILPDAAGLVQTHYTLIDFHGRCATADKFALCPGDDADAAQWTPYDRLDDYALWPETRRVI 411
            +R+YP+RP++ VGVVVWR D VLL+ R   PR G WS+PGG QELGETVR+   RE+ EET +EI I GL+DV+D++  D  G VQ HYTL+DF     + +  A   G DA AA+W   + +D Y LW ETRRVI
Sbjct:    2 SREYPDRPFVGVGVVVWRGDEVLLIERGKGPRTGGWSLPGGKQELGETVRETAHREIREETAVEIEITGLLDVVDMVRKDGEGRVQFHYTLVDFTAEWVSGEAVA---GTDAAAARWVRLEDIDQYRLWDETRRVI 134          
BLAST of mRNA_P-wetherbeei_contig1687.7.1 vs. uniprot
Match: A0A7X3YAV1_9PROT (NUDIX hydrolase n=2 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A7X3YAV1_9PROT)

HSP 1 Score: 152 bits (384), Expect = 7.870e-45
Identity = 79/134 (58.96%), Postives = 91/134 (67.91%), Query Frame = 1
Query:   10 DYPERPWLAVGVVVWREDAVLLVRRAHAPRKGQWSIPGGMQELGETVRQAGIREVFEETGLEITIDGLIDVIDLILPDAAGLVQTHYTLIDFHGRCATADKFALCPGDDADAAQWTPYDRLDDYALWPETRRVI 411
            D  +RP + VGVVV R D VLLVRR   PRK QWSIPGG QE GETVR A  RE+ EETG+EI + GL+DV+D I  DA G   +HYTLIDF     + +  A   GDDA  A+WTP D LDDY LW ETRR+I
Sbjct:    2 DGADRPVVGVGVVVLRGDDVLLVRRGEPPRKDQWSIPGGKQERGETVRDAARREIREETGVEIALIGLVDVVDGIRRDATGATVSHYTLIDFAAEWVSGEAVA---GDDAAEARWTPLDGLDDYRLWSETRRII 132          
BLAST of mRNA_P-wetherbeei_contig1687.7.1 vs. uniprot
Match: A0A7Y8MU40_9PROT (NUDIX hydrolase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A7Y8MU40_9PROT)

HSP 1 Score: 148 bits (374), Expect = 2.030e-43
Identity = 76/136 (55.88%), Postives = 90/136 (66.18%), Query Frame = 1
Query:    4 ARDYPERPWLAVGVVVWREDAVLLVRRAHAPRKGQWSIPGGMQELGETVRQAGIREVFEETGLEITIDGLIDVIDLILPDAAGLVQTHYTLIDFHGRCATADKFALCPGDDADAAQWTPYDRLDDYALWPETRRVI 411
            AR+YP+RP LAVG V+WR D VLLVRR + PR  +WSIPGG QELGETVR+A  REV EET + I I+GL DV+D I+PD  G  + HYTL+DF  R    +     PGDD     W     LD +ALW  TRRVI
Sbjct:    2 AREYPQRPILAVGAVIWRGDHVLLVRRGNPPRANEWSIPGGAQELGETVREALHREVREETHVSIAIEGLADVVDAIIPDEEGRPRHHYTLLDFAARWTGGE---AKPGDDVAETVWAHMRDLDRFALWDATRRVI 134          
BLAST of mRNA_P-wetherbeei_contig1687.7.1 vs. uniprot
Match: A0A3M1JV21_9PROT (NUDIX domain-containing protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3M1JV21_9PROT)

HSP 1 Score: 150 bits (379), Expect = 2.040e-43
Identity = 73/137 (53.28%), Postives = 92/137 (67.15%), Query Frame = 1
Query:    1 QARDYPERPWLAVGVVVWREDAVLLVRRAHAPRKGQWSIPGGMQELGETVRQAGIREVFEETGLEITIDGLIDVIDLILPDAAGLVQTHYTLIDFHGRCATADKFALCPGDDADAAQWTPYDRLDDYALWPETRRVI 411
            + R YP RP++ VGVVV+R D VLLVRR   P+ GQWS+PGG Q LGE+VRQA  REV EETGL++T+ GL+D +D I  D  G V+ HYTL+D+ G  A+ D  A   GDD     W     L+ Y+LW ETRR+I
Sbjct:   13 EPRSYPTRPFVGVGVVVFRGDKVLLVRRGKPPKAGQWSLPGGAQHLGESVRQAARREVREETGLDVTLTGLVDALDFIDRDDTGAVRHHYTLVDWMGEAASGDAVA---GDDVTEVTWVAPHELEQYSLWEETRRII 146          
BLAST of mRNA_P-wetherbeei_contig1687.7.1 vs. uniprot
Match: A0A2S6TH59_9PROT (Nudix hydrolase domain-containing protein n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2S6TH59_9PROT)

HSP 1 Score: 148 bits (374), Expect = 2.760e-43
Identity = 72/135 (53.33%), Postives = 90/135 (66.67%), Query Frame = 1
Query:    7 RDYPERPWLAVGVVVWREDAVLLVRRAHAPRKGQWSIPGGMQELGETVRQAGIREVFEETGLEITIDGLIDVIDLILPDAAGLVQTHYTLIDFHGRCATADKFALCPGDDADAAQWTPYDRLDDYALWPETRRVI 411
            R+YPERP + +GVVV     VL+++R  APRKGQWS+PGG QELGETV +A  REV EETGL I I GL+DV+D I  D AG +Q HYTL++F  R   + +    PG DAD A W P + +    LW ET R+I
Sbjct:    3 REYPERPLVGIGVVVLGARGVLMIKRGKAPRKGQWSLPGGAQELGETVSEAARREVMEETGLTIGILGLVDVVDSIRRDDAGKIQYHYTLVEFLARIPPSAETEPSPGGDADEATWIPVEDIPGLGLWSETERII 137          
BLAST of mRNA_P-wetherbeei_contig1687.7.1 vs. uniprot
Match: UPI001AE1A577 (NUDIX hydrolase n=1 Tax=Azospirillum picis TaxID=488438 RepID=UPI001AE1A577)

HSP 1 Score: 149 bits (375), Expect = 2.810e-43
Identity = 73/136 (53.68%), Postives = 90/136 (66.18%), Query Frame = 1
Query:    4 ARDYPERPWLAVGVVVWREDAVLLVRRAHAPRKGQWSIPGGMQELGETVRQAGIREVFEETGLEITIDGLIDVIDLILPDAAGLVQTHYTLIDFHGRCATADKFALCPGDDADAAQWTPYDRLDDYALWPETRRVI 411
            +R+YP+RPW+ VGVVVWR D VLL+RR  APR GQWS+PGG Q +GETV +  +REV EETGLE+   G++ V+D I PDA G V  HYTL++     A  D  A+C  DDA  A W   D   +   W ETRRVI
Sbjct:   10 SREYPDRPWVGVGVVVWRGDRVLLIRRGKAPRLGQWSLPGGAQSVGETVFETAVREVREETGLEVVPTGIVTVVDAITPDAEGRVHFHYTLVEVAAESADGD--AVC-ADDALEACWATADEAAELTEWDETRRVI 142          
BLAST of mRNA_P-wetherbeei_contig1687.7.1 vs. uniprot
Match: A0A5A9FN57_9PROT (NUDIX hydrolase n=5 Tax=Azospirillum TaxID=191 RepID=A0A5A9FN57_9PROT)

HSP 1 Score: 148 bits (374), Expect = 3.870e-43
Identity = 73/136 (53.68%), Postives = 89/136 (65.44%), Query Frame = 1
Query:    4 ARDYPERPWLAVGVVVWREDAVLLVRRAHAPRKGQWSIPGGMQELGETVRQAGIREVFEETGLEITIDGLIDVIDLILPDAAGLVQTHYTLIDFHGRCATADKFALCPGDDADAAQWTPYDRLDDYALWPETRRVI 411
            +R+YP+RPW+ VGVVVWR D VLL+RR  APR GQWS+PGG Q +GETV +  IREV EETGLE+   G++ V+D I PDA G V  HYTL++     A  D   +C  DDA  A W   D   D   W ETRR+I
Sbjct:   16 SREYPDRPWVGVGVVVWRGDRVLLIRRGKAPRLGQWSLPGGAQSVGETVFETAIREVREETGLEVVPTGIVTVVDAITPDAEGRVHYHYTLVEVAADSAEGDP--IC-ADDALEACWATADEAGDLTEWDETRRII 148          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1687.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A352KFG0_9PROT1.230e-5966.67Nudix hydrolase domain-containing protein n=1 Tax=... [more]
A0A353LQ32_9PROT5.500e-5359.12Phosphohydrolase n=6 Tax=Alphaproteobacteria bacte... [more]
A0A523FYK2_9PROT1.800e-4655.88NUDIX domain-containing protein n=1 Tax=Alphaprote... [more]
A0A6A7KMU7_9PROT1.470e-4553.68NUDIX domain-containing protein n=1 Tax=Alphaprote... [more]
A0A7X3YAV1_9PROT7.870e-4558.96NUDIX hydrolase n=2 Tax=Alphaproteobacteria bacter... [more]
A0A7Y8MU40_9PROT2.030e-4355.88NUDIX hydrolase n=1 Tax=Alphaproteobacteria bacter... [more]
A0A3M1JV21_9PROT2.040e-4353.28NUDIX domain-containing protein n=1 Tax=Alphaprote... [more]
A0A2S6TH59_9PROT2.760e-4353.33Nudix hydrolase domain-containing protein n=2 Tax=... [more]
UPI001AE1A5772.810e-4353.68NUDIX hydrolase n=1 Tax=Azospirillum picis TaxID=4... [more]
A0A5A9FN57_9PROT3.870e-4353.68NUDIX hydrolase n=5 Tax=Azospirillum TaxID=191 Rep... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1687contigP-wetherbeei_contig1687:4872..5282 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1123366.TH3_06755
PFAMsNUDIX
Model size411
Max annot lvl204441|Rhodospirillales
Hectar predicted targeting categoryother localisation
Exons1
Evalue9.33e-43
EggNOG OGsCOG1051@1|root,COG1051@2|Bacteria,1N1KH@1224|Proteobacteria,2UDD1@28211|Alphaproteobacteria,2JT81@204441|Rhodospirillales
DescriptionBelongs to the Nudix hydrolase family
Cds size411
COG categoryF
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186100.5131366-CDS-P-wetherbeei_contig1687:4871..52821683186100.5131366-CDS-P-wetherbeei_contig1687:4871..5282Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1687 4872..5282 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1687.7.1prot_P-wetherbeei_contig1687.7.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1687 4872..5282 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1687.7.1

>prot_P-wetherbeei_contig1687.7.1 ID=prot_P-wetherbeei_contig1687.7.1|Name=mRNA_P-wetherbeei_contig1687.7.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=137bp
QARDYPERPWLAVGVVVWREDAVLLVRRAHAPRKGQWSIPGGMQELGETV
RQAGIREVFEETGLEITIDGLIDVIDLILPDAAGLVQTHYTLIDFHGRCA
TADKFALCPGDDADAAQWTPYDRLDDYALWPETRRVI
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mRNA from alignment at P-wetherbeei_contig1687:4872..5282+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1687.7.1 ID=mRNA_P-wetherbeei_contig1687.7.1|Name=mRNA_P-wetherbeei_contig1687.7.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=411bp|location=Sequence derived from alignment at P-wetherbeei_contig1687:4872..5282+ (Phaeothamnion wetherbeei SAG_119_79)
CAGGCGCGCGACTATCCTGAACGCCCCTGGCTTGCCGTTGGAGTGGTGGT GTGGCGCGAGGATGCTGTCCTGCTGGTCCGGCGCGCGCATGCGCCACGCA AGGGGCAATGGAGCATCCCCGGGGGCATGCAGGAATTGGGCGAGACCGTT CGCCAGGCCGGCATCCGTGAAGTCTTCGAGGAAACCGGACTGGAAATCAC CATAGACGGATTAATCGACGTGATTGATCTGATCCTGCCCGATGCAGCGG GGCTGGTGCAGACCCATTACACGCTGATTGATTTTCATGGCCGCTGCGCC ACCGCAGATAAATTTGCATTGTGTCCCGGCGATGACGCCGACGCCGCGCA ATGGACGCCTTATGACAGGCTGGATGATTATGCTTTGTGGCCGGAAACAC GGCGGGTCATT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1687:4872..5282+

>mRNA_P-wetherbeei_contig1687.7.1 ID=mRNA_P-wetherbeei_contig1687.7.1|Name=mRNA_P-wetherbeei_contig1687.7.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=411bp|location=Sequence derived from alignment at P-wetherbeei_contig1687:4872..5282+ (Phaeothamnion wetherbeei SAG_119_79)
CAGGCGCGCGACTATCCTGAACGCCCCTGGCTTGCCGTTGGAGTGGTGGT
GTGGCGCGAGGATGCTGTCCTGCTGGTCCGGCGCGCGCATGCGCCACGCA
AGGGGCAATGGAGCATCCCCGGGGGCATGCAGGAATTGGGCGAGACCGTT
CGCCAGGCCGGCATCCGTGAAGTCTTCGAGGAAACCGGACTGGAAATCAC
CATAGACGGATTAATCGACGTGATTGATCTGATCCTGCCCGATGCAGCGG
GGCTGGTGCAGACCCATTACACGCTGATTGATTTTCATGGCCGCTGCGCC
ACCGCAGATAAATTTGCATTGTGTCCCGGCGATGACGCCGACGCCGCGCA
ATGGACGCCTTATGACAGGCTGGATGATTATGCTTTGTGGCCGGAAACAC
GGCGGGTCATT
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