mRNA_P-wetherbeei_contig16831.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig16831.1.1
Unique NamemRNA_P-wetherbeei_contig16831.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig16831.1.1 vs. uniprot
Match: UPI001E1D6F86 (solute carrier family 25 member 40-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D6F86)

HSP 1 Score: 200 bits (509), Expect = 4.800e-59
Identity = 118/260 (45.38%), Postives = 161/260 (61.92%), Query Frame = 1
Query:   37 QIGRTEGLAGLYSGLAPTLLMAVPQTVLYFSMYDVIRDELRRHRSLPAGDILAPMIAGGSARLLAATAISPLELIRTQMQSQLEQHRQTLREAFVSTCRETGVRGLWRGLGPTLWRDVPFSMTYWFGYDLITRRLAAAAXXXTASAGLGGRAAAVDGGANSISGEGAIMRAFVGGAGAGSLATVLTHPFDVLKTRQQVVLEEAGGAMAAAGRSSLQQLA-GLYRTEGVRGLYMGLGPRLLRVGPACAIMISCYEGGKLFF 813
            +IGR EG+  L+SGL PTL+MAVP TV+YF+ YD I+  L    ++P      P+++G SAR+ AAT ISPLELIRT+MQS+   +RQ +REA  +T ++ G   LWRGL PTL RDVPFS  YW  Y+++  ++                    DG  + +S     + +FV GA AG+LA ++T PFDV+KT +Q+ L E   A      SS  +L   LYR +G++ L+ GL PR+++V PACAIMIS YE  KLFF
Sbjct:  105 RIGRNEGITSLWSGLPPTLVMAVPATVVYFTSYDQIKTALSHSYNIPVHTWWIPVVSGSSARVFAATVISPLELIRTKMQSEQLTYRQ-VREAVRTTIQQDGSLSLWRGLAPTLLRDVPFSALYWLSYEMMKAKVMK------------------DGQNSKLS----FVESFVSGACAGTLAGIVTLPFDVIKTHRQIELGEVVFAKEKKEVSSTWKLIQNLYRQQGIKALFTGLAPRVMKVAPACAIMISTYEHCKLFF 341          
BLAST of mRNA_P-wetherbeei_contig16831.1.1 vs. uniprot
Match: A0A3Q3X3N9_MOLML (Solute carrier family 25 member 39 n=1 Tax=Mola mola TaxID=94237 RepID=A0A3Q3X3N9_MOLML)

HSP 1 Score: 191 bits (485), Expect = 8.280e-56
Identity = 117/259 (45.17%), Postives = 153/259 (59.07%), Query Frame = 1
Query:   37 QIGRTEGLAGLYSGLAPTLLMAVPQTVLYFSMYDVIRDELRRHRSLPAGDILAPMIAGGSARLLAATAISPLELIRTQMQSQLEQHRQTLREAFVSTCRETGVRGLWRGLGPTLWRDVPFSMTYWFGYDLITRRLAAAAXXXTASAGLGGRAAAVDGGANSISGEGAIMRAFVGGAGAGSLATVLTHPFDVLKTRQQVVLEEAGGAMAAAGRSSLQQLAGLYRTEGVRGLYMGLGPRLLRVGPACAIMISCYEGGKLFF 813
            +I R EGL  L+SGL PTL+MAVP TV+YF+ YD +RD LR    L    I  P++AGG ARL A T ISPLEL+RT+MQS+   + + L     S   + G+  LWRG GPT+ RDVPFS  YWF Y+L+  RL A +    A+               SIS        F  GA +G++A +LT PFDV+KTR+Q+ L E   A      S+ + +  ++   G RGL+ G  PR+++V PACAIMIS YE GK FF
Sbjct:   82 KITRHEGLGSLWSGLPPTLVMAVPATVIYFTCYDQLRDFLRYSLGLQGSHI--PLVAGGLARLGAVTVISPLELVRTKMQSRRRPYSELL-ACIRSAVAQDGLLSLWRGWGPTVLRDVPFSALYWFNYELVKARLCARSRVTQANF--------------SIS--------FAAGAASGAVAAILTLPFDVVKTRRQIQLGEMDSAGGQTS-STWKMMKEIWAELGYRGLFAGFMPRVIKVAPACAIMISTYEFGKAFF 314          
BLAST of mRNA_P-wetherbeei_contig16831.1.1 vs. uniprot
Match: UPI001D0416FB (uncharacterized protein n=1 Tax=Morchella sextelata TaxID=1174677 RepID=UPI001D0416FB)

HSP 1 Score: 193 bits (491), Expect = 1.900e-55
Identity = 119/257 (46.30%), Postives = 153/257 (59.53%), Query Frame = 1
Query:   37 QIGRTEGLAGLYSGLAPTLLMAVPQTVLYFSMYDVIRDELRRHRSLPAGDILAPMIAGGSARLLAATAISPLELIRTQMQSQLEQHRQTLREAFV-STCRETGVRGLWRGLGPTLWRDVPFSMTYWFGYDLITRRLAAAAXXXTASAGLGGRAAAVDGGANSISGEGAIMRAFVGGAGAGSLATVLTHPFDVLKTRQQVVLEEAGGAMAAAGRSSLQQLAGLYRTEGVRGLYMGLGPRLLRVGPACAIMISCYEGGK 804
            +I + EGL  L+ GL+PTLLMA+P  V+YF+ YD +RD L      P G   AP+IAG +AR +AAT ISP+EL RT++Q+    H  +   A V S     GV  LWRGLG TLWRDVPFS  YWFGY+++  RL                AA +      +  E   + AFV GA +G++A +LT PFDV KTR+QV ++  GG       S  + L G++R EGV GL  G  PR+L+V PACAIMIS YE GK
Sbjct:  183 KIAKHEGLTSLWRGLSPTLLMAIPANVIYFTGYDSLRDTLS-----PLGPTAAPLIAGSAARTIAATVISPVELFRTRLQAAGADHTFSSTLAGVRSMVAAEGVASLWRGLGLTLWRDVPFSGVYWFGYEMVKARLRREREQNWHMG-----AAPLQTLPGDLHAESTFVDAFVAGAASGAVAALLTTPFDVGKTRRQVAMQVGGGG------SMPRLLWGIWRMEGVAGLMRGCVPRMLKVAPACAIMISSYEVGK 423          
BLAST of mRNA_P-wetherbeei_contig16831.1.1 vs. uniprot
Match: UPI00193A2F9E (solute carrier family 25 member 40-like n=1 Tax=Styela clava TaxID=7725 RepID=UPI00193A2F9E)

HSP 1 Score: 189 bits (481), Expect = 5.350e-55
Identity = 111/260 (42.69%), Postives = 156/260 (60.00%), Query Frame = 1
Query:   37 QIGRTEGLAGLYSGLAPTLLMAVPQTVLYFSMYDVIRDELRRHRSLPAGDILAPMIAGGSARLLAATAISPLELIRTQMQSQLEQHRQTLREAFVSTCRETGVRGLWRGLGPTLWRDVPFSMTYWFGYDLITRRLAAAAXXXTASAGLGGRAAAVDGGANSISGEGAIMRAFVGGAGAGSLATVLTHPFDVLKTRQQVVL-EEAGGAMAAAGRSSLQQLAGLYRTEGVRGLYMGLGPRLLRVGPACAIMISCYEGGKLFF 813
            +I R EG++ L+SGL+PTL+MAVP TVLYF+ YD ++  L+   S     +  P IAGG AR   AT ISPLELIRT+MQS+   + Q +      + +++G+R LW G  PT+ RDVPFSM YWF Y+LI ++L                           S +   +++F+ G  AG++ATV+THP DV KTR+Q+ L E+  G  ++   ++   L  +    G+RG++ GL PRL ++GPACAIMIS YE GK FF
Sbjct:   85 KITRYEGISSLWSGLSPTLVMAVPATVLYFTSYDQLKSRLQ---SRYGNTLFIPAIAGGVARTGTATIISPLELIRTKMQSRPLTY-QEVASVIRQSVQQSGLRSLWTGWVPTILRDVPFSMFYWFSYELIKQKL---------------------------SFDNLFLKSFLSGFTAGAIATVITHPMDVTKTRRQIALGEKVFGVSSSTPMNTFAVLRDVVNNNGLRGIFSGLLPRLAKIGPACAIMISSYEFGKRFF 313          
BLAST of mRNA_P-wetherbeei_contig16831.1.1 vs. uniprot
Match: A0A836C9F7_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9F7_9STRA)

HSP 1 Score: 190 bits (482), Expect = 1.980e-54
Identity = 129/275 (46.91%), Postives = 154/275 (56.00%), Query Frame = 1
Query:   37 QIGRTEGLAGLYSGLAPTLLMAVPQTVLYFSMYDVIRDELRRHRSLPAGDILAPMIAGGSARLLAATAISPLELIRTQMQSQLEQHR-----QTLREAFVSTCRETGVRGLWRGLGPTLWRDVPFSMTYWFGYDLITRRLAAAAXXXTASAGLGGRAAAVDGGANSISGEGAIM-RAFVGGAGAGSLATVLTHPFDVLKTRQQVVLEEAGGAMAAAGR---------SSLQQLAG-LYRTEGVRGLYMGLGPRLLRVGPACAIMISCYEGGKLFF 813
            QIGR EGL GLYSGL+PTL M VPQTVLYFS Y+  +  L    +   G + APM AGGSAR+LA  A++PLEL+RT+MQ   +        +TLR A  S     G R L+ GL PTLWRDVPFS+ YW GYD I R LAA             R           S  G +M  AF+GG GAG+LATV+THPFDV+KTRQQ+    A    A               +  LA  + + EG   L  GL  R+ +V PACAIMIS YEG K  F
Sbjct:  139 QIGRAEGLRGLYSGLSPTLAMVVPQTVLYFSCYEAFKARLE---TAGLGQVAAPMAAGGSARVLAVVALAPLELVRTRMQGPRDSGGGGGAPRTLRAAL-SEAASGGGRALFTGLVPTLWRDVPFSVMYWAGYDTIRRALAARQR----------RGDXXXXXXXXXSAAGDVMAHAFLGGVGAGALATVVTHPFDVVKTRQQLASAPAPPRGAXXXXXXXXXXPPAERMWPLARRIVQQEGYGALLAGLPARVAKVAPACAIMISSYEGAKHVF 399          
BLAST of mRNA_P-wetherbeei_contig16831.1.1 vs. uniprot
Match: A0A8C5HTB4_9TELE (Solute carrier family 25 member 39-like n=6 Tax=Gouania willdenowi TaxID=441366 RepID=A0A8C5HTB4_9TELE)

HSP 1 Score: 187 bits (474), Expect = 4.090e-54
Identity = 117/262 (44.66%), Postives = 152/262 (58.02%), Query Frame = 1
Query:   37 QIGRTEGLAGLYSGLAPTLLMAVPQTVLYFSMYDVIRDELRRHRSLPAGDILAPMIAGGSARLLAATAISPLELIRTQMQSQLEQHRQTLREAFVSTCRETGVRGLWRGLGPTLWRDVPFSMTYWFGYDLITRRLAAAAXXXTASAGLGGRAAAVDGGANSISGEGAIMRAFVGGAGAGSLATVLTHPFDVLKTRQQVVLEEA---GGAMAAAGRSSLQQLAGLYRTEGVRGLYMGLGPRLLRVGPACAIMISCYEGGKLFF 813
            +I R EGL  L+SGL PTL+MAVP T++YF+ YD +RD LR         +  P++AGG ARL A T ISPLEL+RT+MQS+   + + LR    S   + GV  LWRG GPT+ RDVPFS  YWF Y+L+   L   A    A+               SIS        F  GA +GS+A VLT PFDV+KTR+Q+ L E    GG  +    S+   +  ++   G RGL+ G  PR+++V PACA+MIS YE GK FF
Sbjct:   78 KITRHEGLRSLWSGLPPTLVMAVPATIIYFTCYDQLRDALRFSLGFQGNHV--PLLAGGLARLGAVTVISPLELVRTKMQSRRLPYSE-LRVCIRSAVAQDGVLSLWRGWGPTVLRDVPFSALYWFNYELVKAYLCEQARTPHANF--------------SIS--------FTAGAVSGSIAAVLTLPFDVVKTRRQIQLGEMDTLGGVSSRTRTSTWLIMKEIWADLGYRGLFAGFMPRVIKVAPACAVMISTYEFGKAFF 314          
BLAST of mRNA_P-wetherbeei_contig16831.1.1 vs. uniprot
Match: A0A8B9BXG9_9AVES (Solute carrier family 25 member 39 n=2 Tax=Anatidae TaxID=8830 RepID=A0A8B9BXG9_9AVES)

HSP 1 Score: 186 bits (471), Expect = 5.780e-54
Identity = 119/261 (45.59%), Postives = 154/261 (59.00%), Query Frame = 1
Query:   37 QIGRTEGLAGLYSGLAPTLLMAVPQTVLYFSMYDVIRDELRRHRSLPAGDILAPMIAGGSARLLAATAISPLELIRTQMQSQLEQHRQTLREAFVSTCRETGVRGLWRGLGPTLWRDVPFSMTYWFGYDLITRRLAAAAXXXTASAGLGGRAAAVDGGANSISGEGAIMRAFVGGAGAGSLATVLTHPFDVLKTRQQVVLEEAG-GAMAAAGRSSLQQLAGLYRTE-GVRGLYMGLGPRLLRVGPACAIMISCYEGGKLFF 813
            +I R EG+  L+SGL PTL+MAVP TV+YF+ YD +RD L  H    +G    P++AG  ARL A T ISPLELIRT+MQS+   +R+ LR    S   + G   LWRG GPT+ RDVPFS  YWF Y+L+   L A A    A+                       M +F  GA +G++A VLT PFDV+KT++Q+ L ++    +AA+  SS   L    R E G RGL+ G  PR+++V PACAIMIS YE GK FF
Sbjct:   54 KITRYEGIRSLWSGLPPTLVMAVPATVIYFTAYDQLRDYL--HARTGSGGHHIPLLAGALARLGAVTVISPLELIRTKMQSRQLSYRE-LRVCIQSAVAQDGWLSLWRGWGPTVLRDVPFSALYWFNYELVREWLCAQARLDEAT----------------------FMISFASGAISGTVAAVLTLPFDVVKTQRQIELGDSELHPVAASKPSSTWLLMRRIRAESGTRGLFAGFLPRVIKVAPACAIMISTYEFGKTFF 289          
BLAST of mRNA_P-wetherbeei_contig16831.1.1 vs. uniprot
Match: A0A8C7DV15_ONCKI (Solute carrier family 25 member 40 n=5 Tax=Salmoninae TaxID=504568 RepID=A0A8C7DV15_ONCKI)

HSP 1 Score: 186 bits (473), Expect = 5.930e-54
Identity = 117/261 (44.83%), Postives = 152/261 (58.24%), Query Frame = 1
Query:   37 QIGRTEGLAGLYSGLAPTLLMAVPQTVLYFSMYDVIRDELRRHRSLPAGDILAPMIAGGSARLLAATAISPLELIRTQMQSQLEQHRQTLREAFVSTCRETGVRGLWRGLGPTLWRDVPFSMTYWFGYDLITRRLAAAAXXXTASAGLGGRAAAVDGGANSISGEGAIMRAFVGGAGAGSLATVLTHPFDVLKTRQQVVLEE--AGGAMAAAGRSSLQQLAGLYRTEGVRGLYMGLGPRLLRVGPACAIMISCYEGGKLFF 813
            +I R EG+  L+SGL PTL+MAVP TV+YF+ YD +R  LR      A +  AP++AG  AR+ + T ISPLELIRT+MQSQ   +R+ L E   S  R  G R LWRG GPTL RDVPFS  YW+ Y+     L                        N I  E      F+ GA +GS+A+++T PFDV+KTR+QV + E  A    + A  S+L  +  +    GV GL++G  PR+++V PACAIMISCYE GK FF
Sbjct:   79 KIVRREGIKSLWSGLPPTLIMAVPATVIYFTCYDQLRAALRVRMGSHAEE--APLLAGALARVGSVTVISPLELIRTKMQSQRSSYRE-LSEVIHSAVRNEGWRSLWRGWGPTLLRDVPFSAMYWYNYEKGKAWLCKH---------------------NHIR-EPTFAITFISGAVSGSIASIVTLPFDVVKTRRQVEIGELQAMNLSSKASSSTLSVMTKIVAENGVGGLFVGFLPRVIKVAPACAIMISCYEFGKAFF 314          
BLAST of mRNA_P-wetherbeei_contig16831.1.1 vs. uniprot
Match: A0A8D0CVX9_SANLU (Solute carrier family 25 member 39-like n=9 Tax=Perciformes TaxID=8111 RepID=A0A8D0CVX9_SANLU)

HSP 1 Score: 186 bits (471), Expect = 6.110e-54
Identity = 111/261 (42.53%), Postives = 150/261 (57.47%), Query Frame = 1
Query:   37 QIGRTEGLAGLYSGLAPTLLMAVPQTVLYFSMYDVIRDELRRHRSLPAGDILAPMIAGGSARLLAATAISPLELIRTQMQSQLEQHRQTLREAFVSTCRETGVRGLWRGLGPTLWRDVPFSMTYWFGYDLITRRLAAAAXXXTASAGLGGRAAAVDGGANSISGEGAIMRAFVGGAGAGSLATVLTHPFDVLKTRQQVVLEEAG--GAMAAAGRSSLQQLAGLYRTEGVRGLYMGLGPRLLRVGPACAIMISCYEGGKLFF 813
            +I R EGL  L+SGL PTL+MAVP T++YF+ YD +RD LR         I  P++AGG ARL A T ISPLEL+RT+MQS+   + + LR    S   + G+  LWRG GPT+ RDVPFS  YWF Y+L+  RL   +    A+                      +  +F  GA +G++A +LT PFDV+KTR+Q+ L E    G       S+   +  ++   G RGL+ G  PR+++V PACA+MIS YE GK FF
Sbjct:   56 KISRHEGLRSLWSGLPPTLVMAVPATIIYFTCYDQLRDFLRYGLGFQGSHI--PLVAGGLARLGAVTVISPLELVRTKMQSRRLSYSE-LRVCIRSAVAQDGLLSLWRGWGPTVLRDVPFSALYWFNYELVKARLCERSRMTQAN----------------------VSISFTAGAISGAIAAILTLPFDVVKTRRQIQLGEMDTLGVSLKKTTSTWHIMKEIWAEMGYRGLFAGFMPRVIKVAPACAVMISTYEFGKTFF 291          
BLAST of mRNA_P-wetherbeei_contig16831.1.1 vs. uniprot
Match: A0A7K4KKH9_9AVES (S2539 protein (Fragment) n=1 Tax=Crypturellus soui TaxID=458187 RepID=A0A7K4KKH9_9AVES)

HSP 1 Score: 184 bits (467), Expect = 7.110e-54
Identity = 116/261 (44.44%), Postives = 151/261 (57.85%), Query Frame = 1
Query:   37 QIGRTEGLAGLYSGLAPTLLMAVPQTVLYFSMYDVIRDELRRHRSLPAGDILAPMIAGGSARLLAATAISPLELIRTQMQSQLEQHRQTLREAFVSTCRETGVRGLWRGLGPTLWRDVPFSMTYWFGYDLITRRLAAAAXXXTASAGLGGRAAAVDGGANSISGEGAIMRAFVGGAGAGSLATVLTHPFDVLKTRQQVVLEEAGGAMAAAGRSSLQQLA--GLYRTEGVRGLYMGLGPRLLRVGPACAIMISCYEGGKLFF 813
            +I R EG+  L+SGL PTL+MAVP T +YF+ YD +RD L+         I  P++AG  AR+ A T ISPLELIRT+MQS+   +R+ LR    S   + G   LWRG GPT+ RDVPFS  YWF Y+L+   L               R A +D        E     +FV GA +G++A VLT PFDV+KTR+Q+ L +     A A +SS   L    ++   G RGL+ G  PR+++V PACAIMIS YE GK FF
Sbjct:   13 KITRHEGIRSLWSGLPPTLVMAVPATAIYFTAYDQLRDYLQARAGSRGHHI--PLVAGALARMGAVTVISPLELIRTKMQSRPLSYRE-LRVCIRSAVAQDGWLSLWRGWGPTVLRDVPFSALYWFNYELVRAWLC--------------RQARLD--------EATFAISFVSGAISGTVAAVLTLPFDVVKTRRQIELGDGEALRAPANKSSSTWLLLQRIWAESGARGLFAGFLPRVIKVAPACAIMISTYEFGKTFF 248          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16831.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001E1D6F864.800e-5945.38solute carrier family 25 member 40-like n=1 Tax=Me... [more]
A0A3Q3X3N9_MOLML8.280e-5645.17Solute carrier family 25 member 39 n=1 Tax=Mola mo... [more]
UPI001D0416FB1.900e-5546.30uncharacterized protein n=1 Tax=Morchella sextelat... [more]
UPI00193A2F9E5.350e-5542.69solute carrier family 25 member 40-like n=1 Tax=St... [more]
A0A836C9F7_9STRA1.980e-5446.91Mitochondrial carrier domain-containing protein n=... [more]
A0A8C5HTB4_9TELE4.090e-5444.66Solute carrier family 25 member 39-like n=6 Tax=Go... [more]
A0A8B9BXG9_9AVES5.780e-5445.59Solute carrier family 25 member 39 n=2 Tax=Anatida... [more]
A0A8C7DV15_ONCKI5.930e-5444.83Solute carrier family 25 member 40 n=5 Tax=Salmoni... [more]
A0A8D0CVX9_SANLU6.110e-5442.53Solute carrier family 25 member 39-like n=9 Tax=Pe... [more]
A0A7K4KKH9_9AVES7.110e-5444.44S2539 protein (Fragment) n=1 Tax=Crypturellus soui... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16831contigP-wetherbeei_contig16831:84..1483 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog32264.tetur01g13770.1
Preferred nameSLC25A40
PFAMsMito_carr
Model size813
Max annot lvl33208|Metazoa
KEGG koko:K15119
KEGG TC2.A.29
Hectar predicted targeting categoryother localisation
GOsGO:0000041,GO:0003674,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006828,GO:0006839,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016020,GO:0016021,GO:0016530,GO:0018130,GO:0019438,GO:0019866,GO:0022857,GO:0030001,GO:0031090,GO:0031224,GO:0031966,GO:0031967,GO:0031975,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0042592,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044249,GO:0044271,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046148,GO:0046483,GO:0048878,GO:0050801,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0055065,GO:0055080,GO:0055085,GO:0065007,GO:0065008,GO:0071704,GO:0098771,GO:0140104,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1990542
Exons3
Evalue2.66e-54
EggNOG OGsKOG0761@1|root,KOG0761@2759|Eukaryota,38GBT@33154|Opisthokonta,3BE8D@33208|Metazoa,3CYZP@33213|Bilateria,41UA2@6656|Arthropoda
Ec32 ortholog descriptionMitochondrial carrier domain
Ec32 orthologEc-19_003850.1
DescriptionBelongs to the mitochondrial carrier (TC 2.A.29) family
Cds size813
COG categoryC
BRITEko00000,ko02000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186099.0479755-CDS-P-wetherbeei_contig16831:83..2291683186099.0479755-CDS-P-wetherbeei_contig16831:83..229Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16831 84..229 +
1683186099.0632658-CDS-P-wetherbeei_contig16831:571..7011683186099.0632658-CDS-P-wetherbeei_contig16831:571..701Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16831 572..701 +
1683186099.0730944-CDS-P-wetherbeei_contig16831:946..14831683186099.0730944-CDS-P-wetherbeei_contig16831:946..1483Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16831 947..1483 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16831.1.1prot_P-wetherbeei_contig16831.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig16831 84..1483 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig16831.1.1

>prot_P-wetherbeei_contig16831.1.1 ID=prot_P-wetherbeei_contig16831.1.1|Name=mRNA_P-wetherbeei_contig16831.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=271bp
MWNCLVFVLSTRQIGRTEGLAGLYSGLAPTLLMAVPQTVLYFSMYDVIRD
ELRRHRSLPAGDILAPMIAGGSARLLAATAISPLELIRTQMQSQLEQHRQ
TLREAFVSTCRETGVRGLWRGLGPTLWRDVPFSMTYWFGYDLITRRLAAA
AAAATASAGLGGRAAAVDGGANSISGEGAIMRAFVGGAGAGSLATVLTHP
FDVLKTRQQVVLEEAGGAMAAAGRSSLQQLAGLYRTEGVRGLYMGLGPRL
LRVGPACAIMISCYEGGKLFF
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mRNA from alignment at P-wetherbeei_contig16831:84..1483+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig16831.1.1 ID=mRNA_P-wetherbeei_contig16831.1.1|Name=mRNA_P-wetherbeei_contig16831.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1400bp|location=Sequence derived from alignment at P-wetherbeei_contig16831:84..1483+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTGGAATTGCCTTGTCTTTGTGCTTTCGACGCGCCAGATTGGCCGCAC CGAAGGCCTGGCGGGCCTTTATAGCGGTTTGGCGCCCACGCTGCTCATGG CGGTGCCACAAACAGTGCTGTACTTCAGTATGTATGATGTGATTAGGTGG GTCAGCATGGTTTGTAGACGATTTGACTACAGGAAAACGAAGTGGCGTAA TAAATTGTAGAGCTCGACAGGTTCTTTTTAGTTGTATGAAGTCGTCTATC TTTTTGGGGGGGTCAATTTCTTCTGTGTACAACGTCTTTGACGTTCTTTT TCCCTCTGTCAGCATATGCATTTGATTTTTCTGCTCTTGCTTGACTTTGG TACCAGTGAGCGCCTACAAAATTGGCAAGGTTCCCCTCTTTCGTCACCTC CAAAGCACATACTTCTTCTTTGCCCACCTTTTTCGTTCTTGTTGCACTCT CCTTCTGTCATGCCGCGTTTCCGCTCGTTCTTCCGCAGAGACGAGCTTCG GCGGCACCGATCGCTGCCCGCGGGCGACATACTTGCCCCCATGATTGCCG GGGGCAGCGCCAGGCTGTTGGCAGCGACGGCAATCTCGCCATTGGAGCTG ATCCGGACACAAATGCAGGTCCGTAACTTTCTTTCTCCTCCTTTCTCCCC CTTACAGAAAAACTTCTGCTGCTGAACCCTTCGTCACATGTAAAGCGACC TCGTGCTCCGCTGAAAGTTGCCAATCTCTTCTTTTTCCTTGATGAATCAC ATTGGATTTTGGCTCCTGACACGAGCATGCTTCCGACTGCATGGTTTTCC TTTCTCCTTCCTGTCCGGCGCCGTTGTCTGGTCGCCCGTCTCTGCCACCC GTCGCGCCTGCAGTCGCAGCTGGAGCAACATCGGCAGACGCTGCGGGAGG CGTTTGTGTCGACATGCCGCGAGACAGGTGTCCGGGGCCTGTGGCGCGGC CTCGGCCCGACGCTCTGGCGAGACGTGCCCTTCAGCATGACCTATTGGTT TGGTTACGACCTCATCACCCGCCGCCTCGCCGCCGCTGCCGCCGCCGCTA CTGCCTCCGCCGGCCTTGGCGGTCGTGCTGCCGCCGTTGACGGAGGAGCG AATAGCATTAGCGGTGAGGGGGCGATCATGCGGGCGTTCGTGGGGGGCGC CGGTGCGGGCTCGCTGGCGACGGTGCTGACGCACCCGTTTGACGTGCTGA AGACGCGGCAGCAGGTGGTCCTGGAGGAGGCGGGCGGGGCGATGGCGGCA GCAGGGCGGTCATCGCTGCAGCAGCTGGCAGGGTTGTACCGGACGGAGGG CGTGCGCGGCCTCTACATGGGGCTGGGCCCGCGGCTGCTGCGGGTGGGGC CGGCGTGCGCCATTATGATCTCGTGCTACGAGGGCGGGAAGCTCTTTTTC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig16831:84..1483+

>mRNA_P-wetherbeei_contig16831.1.1 ID=mRNA_P-wetherbeei_contig16831.1.1|Name=mRNA_P-wetherbeei_contig16831.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=813bp|location=Sequence derived from alignment at P-wetherbeei_contig16831:84..1483+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTGGAATTGCCTTGTCTTTGTGCTTTCGACGCGCCAGATTGGCCGCAC
CGAAGGCCTGGCGGGCCTTTATAGCGGTTTGGCGCCCACGCTGCTCATGG
CGGTGCCACAAACAGTGCTGTACTTCAGTATGTATGATGTGATTAGAGAC
GAGCTTCGGCGGCACCGATCGCTGCCCGCGGGCGACATACTTGCCCCCAT
GATTGCCGGGGGCAGCGCCAGGCTGTTGGCAGCGACGGCAATCTCGCCAT
TGGAGCTGATCCGGACACAAATGCAGTCGCAGCTGGAGCAACATCGGCAG
ACGCTGCGGGAGGCGTTTGTGTCGACATGCCGCGAGACAGGTGTCCGGGG
CCTGTGGCGCGGCCTCGGCCCGACGCTCTGGCGAGACGTGCCCTTCAGCA
TGACCTATTGGTTTGGTTACGACCTCATCACCCGCCGCCTCGCCGCCGCT
GCCGCCGCCGCTACTGCCTCCGCCGGCCTTGGCGGTCGTGCTGCCGCCGT
TGACGGAGGAGCGAATAGCATTAGCGGTGAGGGGGCGATCATGCGGGCGT
TCGTGGGGGGCGCCGGTGCGGGCTCGCTGGCGACGGTGCTGACGCACCCG
TTTGACGTGCTGAAGACGCGGCAGCAGGTGGTCCTGGAGGAGGCGGGCGG
GGCGATGGCGGCAGCAGGGCGGTCATCGCTGCAGCAGCTGGCAGGGTTGT
ACCGGACGGAGGGCGTGCGCGGCCTCTACATGGGGCTGGGCCCGCGGCTG
CTGCGGGTGGGGCCGGCGTGCGCCATTATGATCTCGTGCTACGAGGGCGG
GAAGCTCTTTTTC
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