mRNA_P-wetherbeei_contig16825.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig16825.1.1
Unique NamemRNA_P-wetherbeei_contig16825.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig16825.1.1 vs. uniprot
Match: I2CP88_NANGC (Galactokinase n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CP88_NANGC)

HSP 1 Score: 213 bits (543), Expect = 6.320e-64
Identity = 119/215 (55.35%), Postives = 149/215 (69.30%), Query Frame = 1
Query:   13 VQRAKRLYDASFIRDDDQAGFVAAFAPGRVNLIGEHTDYNGGFVMPLALEMGTLVYGKGRL------EPVGVTDGVCTLASELMEEPVTFKADKSLAPGEPHWADYVKGVVSEYMPDVPVDKTLVFRAAVVSTVPLGSGLSSSAALEVSVATFLEAIIGEKVEKVVKANSRCRGAEHKFVHIPCGIMDQYISAMGRAGATLLIDCRSCRATPVLL 639
            +Q A  L+  ++  D D    +AA+APGRVNLIGEHTDYN GFV PLAL++ T V G+G L          +T+   +  SE  +  V+F ADK LAPGEP WA+YVKGVV+EY+ DVP  K LVF AAV S+VPLGSGLSSSA+LEV++ATFLE I+G     + KA  RC+ AEHKF H+PCGIMDQ++SA+ + G  LL+DCRS   T V L
Sbjct:   10 LQHAIDLFREAYGSDPD----IAAYAPGRVNLIGEHTDYNDGFVFPLALDLRTFVVGRGSLLIKPPNPKAALTES--SAISESEQGIVSFVADKDLAPGEPKWANYVKGVVAEYVKDVPAGKYLVFEAAVASSVPLGSGLSSSASLEVAMATFLEQILGTTPGLITKA-LRCQSAEHKFAHVPCGIMDQFVSALAKTGKVLLLDCRSHTETLVPL 217          
BLAST of mRNA_P-wetherbeei_contig16825.1.1 vs. uniprot
Match: D7FSK4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK4_ECTSI)

HSP 1 Score: 202 bits (515), Expect = 9.870e-60
Identity = 114/214 (53.27%), Postives = 141/214 (65.89%), Query Frame = 1
Query:    4 KDLVQRAKRLYDASFIRDDDQAGFVAAFAPGRVNLIGEHTDYNGGFVMPLALEMGTLVYGKGRLEPVGVTDGV-CTLASELMEEPVTFKADKSLAPGEPHWADYVKGVVSEYMPDVPVDKTLVFRAAVVSTVPLGSGLSSSAALEVSVATFLEAIIGEKVEKVVKANSRCRGAEHKFVHIPCGIMDQYISAMGRAGATLLIDCRSCRATPVLLD 642
            ++L   A  L++ASF   D   G    FAPGRVNLIGEHTDYNGGFVMPLAL   T+V G+G + P        C + S    E V+FKAD+ L PG+  WA+Y+KGVV+ +  DVP    L F AA+ S VPLG GLSSSAALEVS+AT LE I G +V  V KA  RC+ ++H F+ IPCGIMDQ++SA+  AG TLL+DCR+     V LD
Sbjct:    8 EELTNTATALFEASFGPSD---GCAVVFAPGRVNLIGEHTDYNGGFVMPLALGKKTVVVGRGSMVPREKAGSAGCRIISSAAPEVVSFKADQDLQPGKVEWANYIKGVVAAFRKDVPEGYELSFDAAIASNVPLGGGLSSSAALEVSMATLLEEITGVRVGGVDKA-LRCQWSDHNFMGIPCGIMDQFVSALAVAGTTLLVDCRTNAFETVPLD 217          
BLAST of mRNA_P-wetherbeei_contig16825.1.1 vs. uniprot
Match: D8LNE1_ECTSI (Galactokinase (Galactose kinase) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNE1_ECTSI)

HSP 1 Score: 203 bits (516), Expect = 4.340e-58
Identity = 111/228 (48.68%), Postives = 147/228 (64.47%), Query Frame = 1
Query:    7 DLVQRAKRLYDASFIRDDDQAGFVAAFAPGRVNLIGEHTDYNGGFVMPLALEMGTLVYGKGRL------EPVGVTDGVCTLASELMEEP----------------VTFKADKSLAPGEPHWADYVKGVVSEYMPDVPVDKTLVFRAAVVSTVPLGSGLSSSAALEVSVATFLEAII---GEKVEKVVKANSRCRGAEHKFVHIPCGIMDQYISAMGRAGATLLIDCRS 615
            +L+  A+ LYD +F   +D     A +APGRVNLIGEHTDY GGFV+PLALE GT+VYG GRL         G   G+C + S+ M++                 V+F+AD+SLAPGEP WA+YVKGVV EYMP VP  K L F A VV +VP+G G+SSSA+L V++ATFL+ ++   G       +    CR AEHKF+++PCGIMDQ++++M   G  +L+DCRS
Sbjct:  212 ELLVMARDLYDDTFGPPEDVRHVSAGYAPGRVNLIGEHTDYQGGFVLPLALERGTVVYGVGRLVDSDEATAEGSDRGLCRVVSQTMQQQQSEDEAGGEAGELGGDVSFRADESLAPGEPEWANYVKGVVKEYMPKVPEGKRLEFTATVVGSVPIGGGVSSSASLSVAMATFLQGVLTSAGVTPPTPKEKAHLCRMAEHKFLNMPCGIMDQFVTSMAVPGHAMLLDCRS 439          
BLAST of mRNA_P-wetherbeei_contig16825.1.1 vs. uniprot
Match: A0A6S9KLL0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9KLL0_HETAK)

HSP 1 Score: 194 bits (492), Expect = 2.950e-57
Identity = 109/219 (49.77%), Postives = 147/219 (67.12%), Query Frame = 1
Query:   10 LVQRAKRLYDASFIRDDDQAGFVAAFAPGRVNLIGEHTDYNGGFVMPLALEMGTLVYGKGRLEPVGV--TDGVCTLASELMEEPVTFKADKSLAPGEPHWADYVKGVVSEYMPDVPVDKTLVFRAAVVSTVPLGSGLSSSAALEVSVATFLEAIIGEKV-------EKVVKANSRCRGAEHKFVHIPCGIMDQYISAMGRAGATLLIDCRSCRATPVLL 639
            L+ RA+ L+  ++ ++ +    +AAFAPGRVNLIGEHTDYN GFV P+ALE  T+V G G ++ V       +  +ASE  +  V F AD SL P +P W++YV+GVV+EY+PD+P    + F   +VS VPLGSGLSSSAALEV+ AT+LE ++   +        KV KA  RC+  EHK+++ PCGIMDQ+ISA+G AG  LL+DCRS   TPV +
Sbjct:    5 LLNRARYLFYQAYGKEAN----IAAFAPGRVNLIGEHTDYNDGFVFPMALEKRTIVVGTGVVKRVLKFRERPLSRVASEQFKGFVEFPADTSLHPRDPQWSNYVRGVVAEYVPDLPAGYAMQFDLFIVSDVPLGSGLSSSAALEVATATWLEELLARDLGRAYARPSKVAKA-LRCQSCEHKYLNTPCGIMDQFISALGEAGKPLLVDCRSREGTPVAM 218          
BLAST of mRNA_P-wetherbeei_contig16825.1.1 vs. uniprot
Match: A0A7S2E1C8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2E1C8_9STRA)

HSP 1 Score: 194 bits (492), Expect = 2.110e-56
Identity = 110/212 (51.89%), Postives = 140/212 (66.04%), Query Frame = 1
Query:   10 LVQRAKRLYDASFIRDDDQAGFVAAFAPGRVNLIGEHTDYNGGFVMPLALEMGTLVYGKGRLEPVGVTDGVCTLASELMEEPVT---FKADKS-LAPGEPHWADYVKGVVSEYMPDVPVDKTLVFRAAVVSTVPLGSGLSSSAALEVSVATFLEAIIGEKVEKVVKANSRCRGAEHKFVHIPCGIMDQYISAMGRAGATLLIDCRSCRATPV 633
            L+ +AK  + A+F  +      +AA APGRVNLIGEHTDY GGFV+PLALE  T+V G G++ P    D +C++ S  +++ +    F AD + L PG+P WA+YVKGVV  Y  D+PV     F AA  S VPLG+GLSSSAALEVS AT LE I+G       KA  RC+GAEH+F  +PCGIMDQ+ISA G A + L+IDCRS   T +
Sbjct:   41 LLGKAKSTFLAAFGEEPT----IAAQAPGRVNLIGEHTDYTGGFVLPLALEKRTVVVGIGKIVPASEDDSLCSIVSTGLDDEINVVHFDADPAVLVPGDPFWANYVKGVVKMYSADLPVGMKFSFSAAFASDVPLGAGLSSSAALEVSTATLLETILGTAPSPEEKA-LRCQGAEHEFCDMPCGIMDQFISARGVAQSLLMIDCRSNVGTTI 247          
BLAST of mRNA_P-wetherbeei_contig16825.1.1 vs. uniprot
Match: E2C4G4_HARSA (Galactokinase n=2 Tax=Harpegnathos saltator TaxID=610380 RepID=E2C4G4_HARSA)

HSP 1 Score: 176 bits (447), Expect = 3.390e-50
Identity = 95/194 (48.97%), Postives = 125/194 (64.43%), Query Frame = 1
Query:   43 SFIRDDDQAGFVAAFAPGRVNLIGEHTDYNGGFVMPLALEMGTLVYGKG----RLEPVGVTDGVCTLASELMEEPVTFKADKSLAPGEPHWADYVKGVVSEYMPDVPVDKTLVFRAAVVSTVPLGSGLSSSAALEVSVATFLEAIIGEKVEKVVKANSRCRGAEHKFVHIPCGIMDQYISAMGRAGATLLIDCR 612
            +F    D+   V  +APGRVNLIGEHTDYN GFV+P+AL M T++ GK     R++ V ++D V     E  E      +   L PG+P WA+YVKG ++ ++ DVP      F+A + STVP G+GLSSSAALEV+  TFLEA+ G+K EK  +    C+ AEH F  +PCGIMDQ+IS MG+ G  LL+DCR
Sbjct:   18 AFAEKFDEPATVCVYAPGRVNLIGEHTDYNDGFVLPMALPMVTVIAGKSHDGQRMKIVSLSDTV----GETNEVEFEASSRADLKPGDPKWANYVKGCIANFVCDVPA-----FKAVIASTVPAGAGLSSSAALEVATYTFLEALSGKKAEKPEEKALACQKAEHDFAGVPCGIMDQFISVMGKEGCALLLDCR 202          
BLAST of mRNA_P-wetherbeei_contig16825.1.1 vs. uniprot
Match: A0A7S2G625_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G625_9STRA)

HSP 1 Score: 176 bits (446), Expect = 4.060e-50
Identity = 103/198 (52.02%), Postives = 129/198 (65.15%), Query Frame = 1
Query:   76 VAAFAPGRVNLIGEHTDYNGGFVMPLALEMGTLVYGKGRLEPVGVTDGVCTLASELME------EPVTFKADKSL-APG--EPHWADYVKGVVSEYMPDVPVDKTLVFRAAVVSTVPLGSGLSSSAALEVSVATFLEAIIGEKVEKVVKANSRCRGAEHKFVHIPCGIMDQYISAMGRAGATLLIDCRSCRATPVLLD 642
            +AA APGRVNLIGEHTDY GGFV+PLALE  T+V   G++  V   + +C++ S  ME      E V+F A+  L  PG  +P W +YVKGVV +Y  D+P  K  VF+A   S VPLG+GLSSSAALEV+ AT LE I G           RC+ AEH+F  +PCGIMDQ+ISAMG+ G  L IDCRS   +PV ++
Sbjct:    3 LAAHAPGRVNLIGEHTDYTGGFVLPLALEKRTVVVATGKVVDVE-DEAMCSVGSIGMEDESGNLEIVSFDANPDLLVPGMPQPFWTNYVKGVVKQYAGDLPAGKKFVFQAVFASDVPLGAGLSSSAALEVATATLLEMISGVVPPNPATKALRCQKAEHEFCDMPCGIMDQFISAMGQDGHVLKIDCRSQVGSPVPMN 199          
BLAST of mRNA_P-wetherbeei_contig16825.1.1 vs. uniprot
Match: A0A1S3NEQ2_SALSA (galactokinase isoform X3 n=13 Tax=Protacanthopterygii TaxID=41705 RepID=A0A1S3NEQ2_SALSA)

HSP 1 Score: 176 bits (445), Expect = 6.570e-50
Identity = 111/220 (50.45%), Postives = 142/220 (64.55%), Query Frame = 1
Query:    1 MKDLVQRAKRLYDASFIRDDDQAGFVAAFAPGRVNLIGEHTDYNGGFVMPLALEMGTLVYGKGRLEPVGVTDGVCTLASELMEEP--VTFKA--DKSL-APGEPHWADYVKGVVSEYM-PDVPVDKTLVFRAAVVSTVPLGSGLSSSAALEVSVATFLEAIIGEKVEKVVKANSRCRGAEHKFVHIPCGIMDQYISAMGRAGATLLIDCRSCRATPVLLD 642
            + +LV  A+R+Y+ SF  D  Q   VA  APGRVNLIGEH DYN GFV+P+AL M T+V G       G +  + T A ++ EEP  V F    DK+L +PG+P WA+YVKGVV  Y  P VP      FRA + S+VPLG GLSSSA+LEV++ TFL+ +  +  +KV KA + C+ AEH    +PCGIMDQ++S +GR    LLIDCRS  ATPV L 
Sbjct:    8 VSELVAEARRVYEQSFGGDGPQ---VAVCAPGRVNLIGEHIDYNQGFVLPMALPMVTVVVGS---RTSGQSASIITAAKDV-EEPRRVDFDLPNDKALLSPGKPSWANYVKGVVQHYRAPPVPG-----FRAVIASSVPLGGGLSSSASLEVAMYTFLQQLKPDDGDKVAKAVA-CQKAEHTHAGVPCGIMDQFVSVLGREAHALLIDCRSLEATPVPLS 214          
BLAST of mRNA_P-wetherbeei_contig16825.1.1 vs. uniprot
Match: A0A6P8ZUC0_THRPL (galactokinase-like n=1 Tax=Thrips palmi TaxID=161013 RepID=A0A6P8ZUC0_THRPL)

HSP 1 Score: 176 bits (445), Expect = 8.270e-50
Identity = 108/216 (50.00%), Postives = 136/216 (62.96%), Query Frame = 1
Query:    7 DLVQRAKRLYDASFIRDDDQAGFVAAFAPGRVNLIGEHTDYNGGFVMPLALEMGTLVYGKGRLEPVGVTDGVCTLASELMEEPVTFKA----DKSLAPGEPHWADYVKGVVSEYMPDVPVDKTLVFRAAVVSTVPLGSGLSSSAALEVSVATFLEAIIGEKVEKVVKANSRCRGAEHKFVHIPCGIMDQYISAMGRAGATLLIDCRSCRATPVLLD 642
            ++V+ A  L+  SF  D + AG  A   PGRVNLIGEHTDYN GFV+P+AL M T+V G+     V VT  +CT + +      T  A    +K L PG P WA+YVKGVV+ +    P      F A VVS+VPLG GLSSSA+LEV+  TFLEAI G K +K+ +    C+ AEH+F  +PCGIMDQ+IS MG+ G  LLIDCRS  +  V LD
Sbjct:   10 EVVREACALFKESFGVDPEAAGCQAGCGPGRVNLIGEHTDYNDGFVLPMALPMVTVVLGRCNGSDV-VT--LCTNSPDADAPKRTQFAVPSLEKPLKPGTPKWANYVKGVVAHFPGGCPG-----FDAVVVSSVPLGGGLSSSASLEVATYTFLEAITGRKCQKLSEKALVCQKAEHEFAGMPCGIMDQFISVMGKQGNALLIDCRSLESRLVPLD 217          
BLAST of mRNA_P-wetherbeei_contig16825.1.1 vs. uniprot
Match: A0A851NUX4_9GALL (GALK1 Galactokinase (Fragment) n=1 Tax=Penelope pileata TaxID=1118817 RepID=A0A851NUX4_9GALL)

HSP 1 Score: 175 bits (443), Expect = 1.300e-49
Identity = 105/217 (48.39%), Postives = 139/217 (64.06%), Query Frame = 1
Query:   10 LVQRAKRLYDASFIRDDDQAGFVAAFAPGRVNLIGEHTDYNGGFVMPLALEMGTLVYGKGRLEPVGVTDGVCTLASEL--MEEP--VTFKAD---KSLAPGEPHWADYVKGVVSEYMPDVPVDKTLVFRAAVVSTVPLGSGLSSSAALEVSVATFLEAIIGEKVEKVVKANSRCRGAEHKFVHIPCGIMDQYISAMGRAGATLLIDCRSCRATPVLL 639
            L+  A+R Y+A+F      A  VAA+APGRVNLIGEHTDYNGGFV+P+AL++GT++ G          DG  ++ +    ++EP  V F A      L+PG+PHWA+YV+GV+  Y    PV     F A + S VPLGSGLSSSA+LEV+  TFL+ +  +  + V KA + C+ AEH F  +PCGIMDQ++S MG+ G  LLIDCRS    PV L
Sbjct:   12 LLAAARREYEAAF----GGAAAVAAWAPGRVNLIGEHTDYNGGFVLPMALQLGTVLVGSP------TQDGTVSILTTAPGVDEPRRVQFPAPTPHSPLSPGQPHWANYVRGVIQHYRGG-PVPG---FSAVIASDVPLGSGLSSSASLEVATYTFLQQLYPDDGDLVAKALA-CQKAEHTFAGVPCGIMDQFVSVMGKEGHALLIDCRSLETVPVPL 213          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16825.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
I2CP88_NANGC6.320e-6455.35Galactokinase n=1 Tax=Nannochloropsis gaditana (st... [more]
D7FSK4_ECTSI9.870e-6053.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LNE1_ECTSI4.340e-5848.68Galactokinase (Galactose kinase) n=2 Tax=Ectocarpu... [more]
A0A6S9KLL0_HETAK2.950e-5749.77Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2E1C8_9STRA2.110e-5651.89Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
E2C4G4_HARSA3.390e-5048.97Galactokinase n=2 Tax=Harpegnathos saltator TaxID=... [more]
A0A7S2G625_9STRA4.060e-5052.02Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A1S3NEQ2_SALSA6.570e-5050.45galactokinase isoform X3 n=13 Tax=Protacanthoptery... [more]
A0A6P8ZUC0_THRPL8.270e-5050.00galactokinase-like n=1 Tax=Thrips palmi TaxID=1610... [more]
A0A851NUX4_9GALL1.300e-4948.39GALK1 Galactokinase (Fragment) n=1 Tax=Penelope pi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16825contigP-wetherbeei_contig16825:1..1384 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LNE1
Preferred nameGALK1
PFAMsGHMP_kinases_C,GHMP_kinases_N,GalKase_gal_bdg
Model size642
Max annot lvl2759|Eukaryota
KEGG rclassRC00002,RC00078
KEGG koko:K00849
KEGG ReactionR01092
KEGG Pathwayko00052,ko00520,ko01100,map00052,map00520,map01100
KEGG ModuleM00554,M00632
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0003674,GO:0003824,GO:0004335,GO:0005488,GO:0005524,GO:0005534,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006012,GO:0006059,GO:0006066,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016052,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0017144,GO:0018130,GO:0019200,GO:0019318,GO:0019320,GO:0019359,GO:0019362,GO:0019363,GO:0019388,GO:0019400,GO:0019402,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019751,GO:0019752,GO:0030246,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0033499,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035639,GO:0036094,GO:0042866,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046365,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046835,GO:0046939,GO:0048029,GO:0051186,GO:0051188,GO:0055086,GO:0061615,GO:0061620,GO:0061622,GO:0061623,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615
Exons4
Evalue7.12e-59
EggNOG OGsCOG0153@1|root,KOG0631@2759|Eukaryota
EC2.7.1.6
Descriptiongalactokinase activity
Cds size642
COG categoryG
BRITEko00000,ko00001,ko00002,ko01000,ko04147
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186098.8928475-CDS-P-wetherbeei_contig16825:0..1391683186098.8928475-CDS-P-wetherbeei_contig16825:0..139Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16825 1..139 -
1683186098.9021654-CDS-P-wetherbeei_contig16825:438..6231683186098.9021654-CDS-P-wetherbeei_contig16825:438..623Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16825 439..623 -
1683186098.9099185-CDS-P-wetherbeei_contig16825:874..9721683186098.9099185-CDS-P-wetherbeei_contig16825:874..972Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16825 875..972 -
1683186098.9178905-CDS-P-wetherbeei_contig16825:1164..13841683186098.9178905-CDS-P-wetherbeei_contig16825:1164..1384Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16825 1165..1384 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16825.1.1prot_P-wetherbeei_contig16825.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig16825 1..1384 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig16825.1.1

>prot_P-wetherbeei_contig16825.1.1 ID=prot_P-wetherbeei_contig16825.1.1|Name=mRNA_P-wetherbeei_contig16825.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=214bp
MKDLVQRAKRLYDASFIRDDDQAGFVAAFAPGRVNLIGEHTDYNGGFVMP
LALEMGTLVYGKGRLEPVGVTDGVCTLASELMEEPVTFKADKSLAPGEPH
WADYVKGVVSEYMPDVPVDKTLVFRAAVVSTVPLGSGLSSSAALEVSVAT
FLEAIIGEKVEKVVKANSRCRGAEHKFVHIPCGIMDQYISAMGRAGATLL
IDCRSCRATPVLLD
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mRNA from alignment at P-wetherbeei_contig16825:1..1384-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig16825.1.1 ID=mRNA_P-wetherbeei_contig16825.1.1|Name=mRNA_P-wetherbeei_contig16825.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1384bp|location=Sequence derived from alignment at P-wetherbeei_contig16825:1..1384- (Phaeothamnion wetherbeei SAG_119_79)
ATGAAGGACCTTGTACAGCGGGCCAAGCGTCTGTACGACGCGAGCTTTAT CCGGGACGACGACCAGGCGGGCTTCGTCGCCGCCTTTGCGCCTGGGCGCG TGAACCTCATTGGCGAGCACACCGACTACAACGGCGGGTTCGTGATGCCG CTTGCGCTCGAGATGGGGACGCTCGTCTACGGAAAGGGCCGCCTCGAGCC GGTCGGCGTCACTGATGGCGGTATAGTTTAGATCTCCGTGTCGATCGCCT GCTGTTTCTTTCTCACGTTGTTGCTCGAGGATAGCTTTGTCGGTATTTAG ACTGCGCTATGTTTGTCAAGAATCTGAATGCCCGGCTTGTCTCAAAGCAT CTTTTTCTTTCTGCTCTTGCTCTCTGCCATCCACTTTTATCATTTCTTCC CTACCATAAAAGTCTGCACGCTCGCGTCGGAGCTGATGGAGGAGCCCGTG ACGTTCAAGGCCGACAAGTCACTGGCGCCGGGAGAGCCGCACTGGGCAGA TTACGTGAAGGTGTGCATTATGTGCTTTCCTCATCAACTGCGGTGCCCGC TCGCTCTCGCTTTGTGAGGAGTTGCCTCTTTAGCCTCCGAAGGCATAACA TGCCTGAAGCCTCTTACGCCTGGAGATGCCGGCACCTGCCTCCATCGAAA CATCACTTGTGCCACTGCAACGTTCTGCCCTGGGCTCTCCCCATTCTTTC CCACATGCTGCCCCTGAACCAAACCACCGCATCGCCGCCGCCGCTCGCCG CGCCGGCCCAGGGCGTGGTGTCCGAGTACATGCCGGACGTCCCCGTGGAC AAGACGCTCGTGTTTCGGGCGGCGGTCGTGTCGACGGTCCCGCTGGGCTC CGGGCTATCGAGCTCGGCGGCGCTGGAGGTGTCAGTGGCAACGTTCCTGG AGGCGATCATCGGCGAAAAAGTCGAGAAGGTTGTCAAGGCCAACAGGTGA AGAAACGTGCGAGTTTGTAACAGGTTTTTGGCGGCTTGGCCTTTCAGCCA TTTGCCTGTCGATTCAGTCTTGAGCATCTTGATATGAGCACAGCGGCTGT CCGTCCAATTCTGCGCCAAACAGACCCTCGTCGACCGGAACACCGCCATC GAGCTTGCCGCCTGCCGTCTAACTGTTAACAAACGATACCAATGATAACC GTGCAATCCTTGCCGTCTTGGCGGATTGACGCCCTGACCGCATCGGATGG GACCTGCCGACCGCACCGGCTCGACTCGATCGAAATGACGCCAAGTAGGT GCCGCGGTGCGGAGCACAAGTTCGTTCACATCCCGTGCGGCATCATGGAC CAGTACATCTCCGCCATGGGCCGTGCCGGCGCTACACTGCTCATCGACTG CCGCAGCTGCCGCGCCACGCCAGTGCTCTTGGAC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig16825:1..1384-

>mRNA_P-wetherbeei_contig16825.1.1 ID=mRNA_P-wetherbeei_contig16825.1.1|Name=mRNA_P-wetherbeei_contig16825.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=642bp|location=Sequence derived from alignment at P-wetherbeei_contig16825:1..1384- (Phaeothamnion wetherbeei SAG_119_79)
ATGAAGGACCTTGTACAGCGGGCCAAGCGTCTGTACGACGCGAGCTTTAT
CCGGGACGACGACCAGGCGGGCTTCGTCGCCGCCTTTGCGCCTGGGCGCG
TGAACCTCATTGGCGAGCACACCGACTACAACGGCGGGTTCGTGATGCCG
CTTGCGCTCGAGATGGGGACGCTCGTCTACGGAAAGGGCCGCCTCGAGCC
GGTCGGCGTCACTGATGGCGTCTGCACGCTCGCGTCGGAGCTGATGGAGG
AGCCCGTGACGTTCAAGGCCGACAAGTCACTGGCGCCGGGAGAGCCGCAC
TGGGCAGATTACGTGAAGGGCGTGGTGTCCGAGTACATGCCGGACGTCCC
CGTGGACAAGACGCTCGTGTTTCGGGCGGCGGTCGTGTCGACGGTCCCGC
TGGGCTCCGGGCTATCGAGCTCGGCGGCGCTGGAGGTGTCAGTGGCAACG
TTCCTGGAGGCGATCATCGGCGAAAAAGTCGAGAAGGTTGTCAAGGCCAA
CAGTAGGTGCCGCGGTGCGGAGCACAAGTTCGTTCACATCCCGTGCGGCA
TCATGGACCAGTACATCTCCGCCATGGGCCGTGCCGGCGCTACACTGCTC
ATCGACTGCCGCAGCTGCCGCGCCACGCCAGTGCTCTTGGAC
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