mRNA_P-wetherbeei_contig16820.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig16820.1.1 vs. uniprot
Match: D8LNK7_ECTSI (BTB domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNK7_ECTSI) HSP 1 Score: 380 bits (977), Expect = 9.130e-122 Identity = 193/280 (68.93%), Postives = 230/280 (82.14%), Query Frame = 1
Query: 4 VRLYDVETTQVVRDFKDIHEDHINISRFANHSPFLFATSSFDRTAKMWDSRMRADKRPLFSCRSSQGHVMVCFSPDDTFLLTSAVDNEVTQYFAVDGRLHVKLDIPRTSLDDNFTRAYYTSSGRLILSGSSEEQVVRLHCAQTGRLIHWAEMYAGRKNNELFIQSLRGDPWHDFQFSVLVNYRHEYRDSA-GLEIVHVDMLRGRGGEDLSGVMCYTSSARLASDLKRACLDGDHADAVLVAADNAYYLAHKAVLCCRSPLLREMLNAATAMSAGGESGKG 840
V+L+D+ T QVVRDFKD+HEDHINISRFANHSPF+FATSSFD+T K WDSR+RAD P+++C S GHVM+ FSPDD FLLTSAVDNEV QY A+DGRLH+ LD+P+T LD+NFTR+YYTSSGRLILSGSSEEQ VRL+CAQTGRLIH AEMY GRK+ L++QSLRGDP HDFQFSVLVNYR D+A LEIV+VDML+G GEDLS +M Y SS+RL++DL+RAC+D AD LVA D + +LAHKAV+ CRS +L ++L A A +A E GKG
Sbjct: 205 VKLFDLSTGQVVRDFKDVHEDHINISRFANHSPFVFATSSFDKTVKAWDSRVRADNAPIYTCHSEMGHVMLSFSPDDVFLLTSAVDNEVKQYLALDGRLHMDLDVPKTGLDENFTRSYYTSSGRLILSGSSEEQTVRLYCAQTGRLIHSAEMYPGRKHGSLYVQSLRGDPHHDFQFSVLVNYR----DTAYPLEIVNVDMLQGTDGEDLSSLMAYASSSRLSADLRRACVDKQGADLFLVARDRSRFLAHKAVVACRSAVLGDLL-AKAAAAASSEEGKG 479
BLAST of mRNA_P-wetherbeei_contig16820.1.1 vs. uniprot
Match: A0A6H5K536_9PHAE (BTB domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K536_9PHAE) HSP 1 Score: 373 bits (957), Expect = 6.350e-115 Identity = 185/265 (69.81%), Postives = 221/265 (83.40%), Query Frame = 1
Query: 4 VRLYDVETTQVVRDFKDIHEDHINISRFANHSPFLFATSSFDRTAKMWDSRMRADKRPLFSCRSSQGHVMVCFSPDDTFLLTSAVDNEVTQYFAVDGRLHVKLDIPRTSLDDNFTRAYYTSSGRLILSGSSEEQVVRLHCAQTGRLIHWAEMYAGRKNNELFIQSLRGDPWHDFQFSVLVNYRHEYRDSA-GLEIVHVDMLRGRGGEDLSGVMCYTSSARLASDLKRACLDGDHADAVLVAADNAYYLAHKAVLCCRSPLLREML 795
V+L+D+ T QVVRDF+D+HEDHINISRFANHSPF+FATSSFD+T K WDSR+RAD P+++C S GHVM+ FSPDD FLLTSAVDNEV QY A+DGRLH+ LD+P+T LD+NFTR+YYTSSGRLILSGSSEEQ VRL+CAQTGRLIH AEMY GRK+ L++QSLRGDP HDFQFSVLVNYR D+A LEIV+VDML+G GGEDLS +M Y SS+RL++DL+RAC+D AD LVA D + + AHKAV+ CRS +L +L
Sbjct: 191 VKLFDLGTGQVVRDFEDVHEDHINISRFANHSPFVFATSSFDKTVKAWDSRVRADNAPIYTCHSEMGHVMLSFSPDDVFLLTSAVDNEVKQYLALDGRLHMDLDVPKTGLDENFTRSYYTSSGRLILSGSSEEQTVRLYCAQTGRLIHSAEMYPGRKHGSLYVQSLRGDPHHDFQFSVLVNYR----DTAYPLEIVNVDMLQGTGGEDLSSLMAYASSSRLSADLRRACVDKQGADLFLVARDRSRFPAHKAVVACRSAVLGGLL 451
BLAST of mRNA_P-wetherbeei_contig16820.1.1 vs. uniprot
Match: A0A835ZCY9_9STRA (BTB domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCY9_9STRA) HSP 1 Score: 294 bits (752), Expect = 3.890e-87 Identity = 173/310 (55.81%), Postives = 203/310 (65.48%), Query Frame = 1
Query: 4 VRLYDVETTQVVRDFKDIHEDHINISRFANHSPFLFATSSFDRTAKMWDSRMRADKRPLFSCRSSQGHVMVCFSPDDTFLLTSAVDNEVTQYFAVDGRLHVKLDIPRTSLD--DNFTRAYYTSSGRLILSGSSEEQVVRLHCAQTGRLIHWAEMYA-------------GRKNNELFIQSLRGDPWHDFQFSVLVNYRHEYRDSAGLEIVHVDMLR----GR--------------------GGEDLSGVMCYTSSARLASDLKRACLDG--DHADAVLVAADNAYYLAHKAVLCCRSPLLREMLNAATA 810
V +YD+ET VVR F IH++HINISRFAN SPFLFATSSFD+T KMWD+R+RA+ RP+++C SSQGHVMVCFSPDD FLLTSAVDNEV+QY AVDGRLH+KLD+P SL+ +NFTR+YYT+SGR I+SGSSEEQ VRLHCA TGRL AEMY GRK+ L++QSLRGDP D FSVLVNYR LEIV +DM GR G+D + LA+DL A DG + DA +VAAD A Y AH AVL CRSP L+E+L A A
Sbjct: 51 VAMYDLETGAVVRTFLKIHDNHINISRFANQSPFLFATSSFDKTVKMWDARVRAEHRPIYTCTSSQGHVMVCFSPDDVFLLTSAVDNEVSQYLAVDGRLHLKLDVPSASLNAHENFTRSYYTASGRFIISGSSEEQSVRLHCANTGRLARAAEMYVETSTSTVAARAYPGRKHESLYVQSLRGDPQRDGAFSVLVNYRDPAHP---LEIVTIDMGAPCDAGRRAAAPXXXXXXXXXXXXXVHSGQD-------GACGALATDLACAWQDGGDELLDACVVAADGATYSAHVAVLACRSPALKELLQEAKA 350
BLAST of mRNA_P-wetherbeei_contig16820.1.1 vs. uniprot
Match: A0A7S1CMT7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CMT7_9STRA) HSP 1 Score: 260 bits (665), Expect = 1.260e-76 Identity = 140/272 (51.47%), Postives = 187/272 (68.75%), Query Frame = 1
Query: 1 SVRLYDVETTQVVRDFKDIHEDHINISRFANHSPFLFATSSFDRTAKMWDSRMRADKRPLFSCRSSQGHVMVCFSPDDTFLLTSAVDNEVTQYFAVDGRLHVKLDIPRTSLDDNFTRAYYTSSGRLILSGSSEEQVVRLHCAQTGRLIHWAEMYAGRKNNELFIQSLRGDPWHDFQFSVLVNYRHEYRDSA-GLEIVHVDMLRGRGGEDLSGVMCYTSSARLASDLKRACLDGDHADAVLVAADNAYYL----AHKAVLCCRSPLLREMLNA 801
SVRLYD+ T ++ R F +IH DHINI+RFA+HSP LFATSSFDRT K+WD RMR D++P ++CRS +G+V++CFSPDD +LLTSAVDNE+ QY DGRLH+ LD+ +T DN+TR+YY + G +I+SGSSEE+V+RLHCA TG L+H A++Y GRK+ L+IQSLRG+P D +F+VL NYR DSA LEIV + + G DL+ + + R L A D AD LVA + + AH+++L R + R +L A
Sbjct: 55 SVRLYDLGTGKLARVFSEIHTDHINITRFAHHSPNLFATSSFDRTIKVWDLRMR-DRKPNYTCRSDRGNVILCFSPDDLYLLTSAVDNEIRQYTVQDGRLHLHLDVVKTGRSDNYTRSYYMNGGDVIVSGSSEEKVLRLHCAHTGELLHSADLYPGRKSPLLYIQSLRGNPHRDHEFAVLCNYR----DSAFPLEIVKISQVVDAEGNDLTALTSRPGTQRWYDQLVPAVQDESSADMSLVAREKDGTMVRIPAHRSILAARCDVFRRLLRA 321
BLAST of mRNA_P-wetherbeei_contig16820.1.1 vs. uniprot
Match: A0A835YWL6_9STRA (Quinon protein alcohol dehydrogenase-like superfamily (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWL6_9STRA) HSP 1 Score: 241 bits (614), Expect = 2.220e-74 Identity = 120/183 (65.57%), Postives = 141/183 (77.05%), Query Frame = 1
Query: 4 VRLYDVETTQVVRDFKDIHEDHINISRFANHSPFLFATSSFDRTAKMWDSRMRADK-----------------RPLFSCRSSQGHVMVCFSPDDTFLLTSAVDNEVTQYFAVDGRLHVKLDIPRTSLD--DNFTRAYYTSSGRLILSGSSEEQVVRLHCAQTGRLIHWAEMYAGRKNNELFIQ 495
V +YDVET V R FKDIH++HINISRFAN SPFLFATSSFD+T KMWD+R+RAD RP+++C S+QGHVMVCFSPDD FLLTSAVDNEVTQY VDGR H+KLD+P T+ + +NFTRAYYT+SGR ILSGSSEE+ VRLHC+ TGRL H EMY GRK++ L+IQ
Sbjct: 186 VAMYDVETGAVCRAFKDIHKNHINISRFANQSPFLFATSSFDKTVKMWDARVRADHSYVCPVPPACPPPPPQTRPIYTCTSAQGHVMVCFSPDDAFLLTSAVDNEVTQYLTVDGRHHLKLDVPSTAANRAENFTRAYYTASGRFILSGSSEERAVRLHCSATGRLAHAVEMYPGRKHDSLYIQ 368
BLAST of mRNA_P-wetherbeei_contig16820.1.1 vs. uniprot
Match: A0A4D9D8W8_9STRA (BTB domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D8W8_9STRA) HSP 1 Score: 238 bits (608), Expect = 7.790e-68 Identity = 124/203 (61.08%), Postives = 154/203 (75.86%), Query Frame = 1
Query: 1 SVRLYDVETTQVVRDFKDIHEDHINISRFANHSPFLFATSSFDRTAKMWDSRMRADKRPLFSCRSSQGHVMVCFSPDDTFLLTSAVDNEVTQYFAVDGR--LHVKLDIPRTSLDDNFTRAYYTSSGRLILSGSSEEQVVRLHCAQTGRLIHWAEMYAGRKNNELFIQSLRGDPWHDFQFSVLVNYRHEYRDSAGLEIVHVDML 603
+V+LYD +T +VR F+ IH DHINISRFANHSP LFA+SSFD++ K+WD R A RPL++ RS QGHVMVCFSP+D LL S VDN++ Q AVDGR LH+K +P+T L DN+TRAYYT+SG+ ILSGSSEEQ VR+HCAQTG + E Y GR+++ L++QSLRGDP D +FSVLVNYR S LEI+ +DML
Sbjct: 168 TVQLYDTQTGAIVRRFESIHSDHINISRFANHSPHLFASSSFDKSIKLWDLRC-AGTRPLYTARSEQGHVMVCFSPEDVHLLASRVDNDIVQLEAVDGRIALHLK-GLPKTGLADNYTRAYYTASGQAILSGSSEEQDVRVHCAQTGDALASFEAYPGRRHHSLYVQSLRGDPLCDHRFSVLVNYRDA---SFPLEIISIDML 365
BLAST of mRNA_P-wetherbeei_contig16820.1.1 vs. uniprot
Match: A0A7S3YEB9_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YEB9_9EUKA) HSP 1 Score: 215 bits (548), Expect = 2.640e-63 Identity = 124/277 (44.77%), Postives = 168/277 (60.65%), Query Frame = 1
Query: 1 SVRLYDVETTQVVRDFKDIHEDHINISRFANHSPFLFATSSFDRTAKMWDSRMRADKRPLFSCRSSQGHVMVCFSPDDTFLLTSAVDNEVTQYFAVDGRLHVKLDIPRTSLDDNFTRAYYTSSGRLILSGSSEEQVVRLHCAQTGRLIHWAEMYAGRKNNELFIQSLRGDPWHDFQFSVLVNYRHEYRDSAGLEIVHVDMLRGRGGEDLSGVMCYTSSARLASDLKRACLDGDHADAVLVAADNAYYLAHKAVLCCRSPLLREMLN---AATAMSAG 822
+V ++DVET Q VR++ IHEDHINI RFAN+ P + T SFD T K+WD+R A +RP+ S G+VMVCFSPDD + L SAVDNEV QY VDG LH+K DI + N+TR+YY + G L++SGSS + VV + + TG++I MY GR++ L+IQSLRG+P + +F VLV YR+ A E+V VD+ R G+ + ++ +L D R + D LVA D AHKA+L R P R L +T++SAG
Sbjct: 152 NVNIFDVETGQEVREYNGIHEDHINICRFANNLPDILLTCSFDNTIKLWDNRCSA-QRPIHVSNSKGGNVMVCFSPDDMYFLASAVDNEVKQYTTVDGSLHLKYDIEPINSSINYTRSYYANDGDLVVSGSSNDDVVHICSSSTGKIIESIRMYEGRRHPNLYIQSLRGNPINANRFGVLVCYRYS---DAPYEVVDVDLNRDSKGQPVHLPYSIAAAQQLTQDFARQIDNPSFYDVELVADDGRRLRAHKAILSPRWPWFRRRLTNLKPSTSLSAG 424
BLAST of mRNA_P-wetherbeei_contig16820.1.1 vs. uniprot
Match: A0A7S2W5J7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W5J7_9STRA) HSP 1 Score: 206 bits (523), Expect = 5.950e-62 Identity = 105/196 (53.57%), Postives = 144/196 (73.47%), Query Frame = 1
Query: 67 HINISRFANHSPFLFATSSFDRTAKMWDSRMRADKRPLFSCRSSQGHVMVCFSPDDTFLLTSAVDNEVTQYFAVDGRLHVKLDIPRTSLDDNFTRAYYTSSGRLILSGSSEEQVVRLHCAQTGRLIHWAEMYAGRKNNELFIQSLRGDPWHDFQFSVLVNYRHEYRDSAGLEIVHVDMLRGRGGEDLSGVMCYTSS 654
HINI+RFANH P+LFATSSFD+TAK+WD+RMR+ RP+++ S +GHV++CFSPDDT LLTSAVDNEV Q+ ++GR H + + +T L DNFTRAYY+ SGR +LSGSSEE VR++ + TG L+ MY R+ L+IQSLRGDP+ D + SVLVNYR + LEI+ +DM++ E+++ ++ + S
Sbjct: 1 HINIARFANHCPYLFATSSFDKTAKLWDTRMRS-VRPIYTRTSKEGHVLLCFSPDDTHLLTSAVDNEVRQFMTLNGRSHQEFRV-QTGLADNFTRAYYSCSGRYVLSGSSEEDAVRIYDSSTGTLLRSTSMYPRRRYAGLYIQSLRGDPFSDTRLSVLVNYRSS---AYPLEIITLDMMQHLDQENIAPILQASES 191
BLAST of mRNA_P-wetherbeei_contig16820.1.1 vs. uniprot
Match: A0A7S0NCM1_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0NCM1_9CRYP) HSP 1 Score: 209 bits (533), Expect = 6.800e-62 Identity = 105/194 (54.12%), Postives = 134/194 (69.07%), Query Frame = 1
Query: 4 VRLYDVETTQVVRDFKDIHEDHINISRFANHSPFLFATSSFDRTAKMWDSRMRADKRPLFSCRSSQGHVMVCFSPDDTFLLTSAVDNEVTQYFAVDGRLHVKLDIPRTSLDDNFTRAYYTSSGRLILSGSSEEQVVRLHCAQTGRLIHWAEMYAGRKNNELFIQSLRGDPWHDFQFSVLVNYRHEYRDSAGLEI 585
V LYD++ + ++ FK +H HIN+ +FAN SP LFATSSFD+ KMWD R A+ RP+F+CRS QG+VMVCFSPDD +LL+SAVDNEV QY AVDGRL +K DI + N+TR+YY + I+SGS EE VVR++CA+TGR + G L++QSLRGDP+H F SVLV Y H S LE+
Sbjct: 187 VALYDLKVGKKIQTFKSLHSQHINVLKFANFSPSLFATSSFDKDVKMWDLREGAN-RPIFTCRSDQGNVMVCFSPDDRYLLSSAVDNEVRQYTAVDGRLTMKFDILSLGSEHNYTRSYYMNGSDYIISGSCEESVVRIYCARTGRFFRDFTIDRGSGPASLYVQSLRGDPFHPFHLSVLVAYNHPLAPSEMLEV 379
BLAST of mRNA_P-wetherbeei_contig16820.1.1 vs. uniprot
Match: A0A4D8Y5A5_SALSN (Uncharacterized protein n=1 Tax=Salvia splendens TaxID=180675 RepID=A0A4D8Y5A5_SALSN) HSP 1 Score: 200 bits (508), Expect = 8.380e-58 Identity = 102/210 (48.57%), Postives = 140/210 (66.67%), Query Frame = 1
Query: 1 SVRLYDVETTQVVRDFKDIHEDHINISRFANHSPFLFATSSFDRTAKMWDSRMRADKRPLFSCRSSQGHVMVCFSPDDTFLLTSAVDNEVTQYFAVDGRLHVKLDIPRTSLDDNFTRAYYTSSGRLILSGSSEEQVVRLHCAQTGRLIHWAEMYAGRKNNELFIQSLRGDPWHDFQFSVLVNYRHEYRDSAGLEIVHVDMLRGRGGEDLS 630
+V LYD+ + + ++DF D+H++HIN+ +F+NHSP LFATSSFD+ KMWD R + ++ P ++ SS+G+VMVCFSPDD +LL SAVDNEV Q AVDGRLH+ I T N+TR+YY + ++SGS +E VVR+ CA TGR + + + +F+QSLRGDP+ DF SVL Y R S+ EIV V++L G D S
Sbjct: 212 NVALYDISSGKRLQDFADMHQEHINVVKFSNHSPSLFATSSFDQNVKMWDIRQKPNQ-PCYTASSSRGNVMVCFSPDDHYLLVSAVDNEVRQLLAVDGRLHLNFGIASTGSSQNYTRSYYMNGRDYVISGSCDEHVVRVCCANTGRRLRDVSLEGKGAGSSMFVQSLRGDPFRDFSMSVLAAY---IRPSSNSEIVKVNLLES-GDSDKS 416 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16820.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig16820.1.1 >prot_P-wetherbeei_contig16820.1.1 ID=prot_P-wetherbeei_contig16820.1.1|Name=mRNA_P-wetherbeei_contig16820.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=286bp SVRLYDVETTQVVRDFKDIHEDHINISRFANHSPFLFATSSFDRTAKMWDback to top mRNA from alignment at P-wetherbeei_contig16820:20..1451- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig16820.1.1 ID=mRNA_P-wetherbeei_contig16820.1.1|Name=mRNA_P-wetherbeei_contig16820.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1432bp|location=Sequence derived from alignment at P-wetherbeei_contig16820:20..1451- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig16820:20..1451- >mRNA_P-wetherbeei_contig16820.1.1 ID=mRNA_P-wetherbeei_contig16820.1.1|Name=mRNA_P-wetherbeei_contig16820.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=858bp|location=Sequence derived from alignment at P-wetherbeei_contig16820:20..1451- (Phaeothamnion wetherbeei SAG_119_79)back to top |