mRNA_P-wetherbeei_contig16812.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig16812.1.1
Unique NamemRNA_P-wetherbeei_contig16812.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig16812.1.1 vs. uniprot
Match: A0A7V1RGJ3_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Chthonomonadales bacterium TaxID=2282151 RepID=A0A7V1RGJ3_9BACT)

HSP 1 Score: 60.5 bits (145), Expect = 7.340e-8
Identity = 32/81 (39.51%), Postives = 52/81 (64.20%), Query Frame = 1 
Query:   13 PILIFSVVA-GGVTLDRQREKQRSLLSGVFESQPTLVAARAEGRVGKISSPEGTLVKSGDLLLTLDAKPGQSDAAALESKV 252
            P++I SV+  GG  ++ +R ++RS LSG FE+QP   A+R+ GRV +I   EG  V +G+ LL L+A P  ++  A ++ +
Sbjct:   11 PLVILSVLGIGGYAIEARRARERSRLSGFFETQPIQAASRSGGRVARILVDEGDAVTAGERLLVLEAGPQVAELEARKAAI 91
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16812.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7V1RGJ3_9BACT7.340e-839.51Uncharacterized protein (Fragment) n=1 Tax=Chthono... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16812contigP-wetherbeei_contig16812:124..618 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog661478.OP10G_2906
PFAMsBiotin_lipoyl_2,GAF,HlyD_3,HlyD_D23
Model size495
Max annot lvl2|Bacteria
KEGG koko:K01993,ko:K13408,ko:K16922
KEGG TC8.A.1
KEGG Pathwayko04626,map04626
KEGG ModuleM00339
Hectar predicted targeting categorysignal peptide
Exons1
Evalue8.62e-12
EggNOG OGsCOG0845@1|root,COG0845@2|Bacteria
DescriptionBelongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Cds size495
COG categoryM
BRITEko00000,ko00001,ko00002,ko01002,ko02000,ko02044
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186098.5708907-CDS-P-wetherbeei_contig16812:123..6181683186098.5708907-CDS-P-wetherbeei_contig16812:123..618Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16812 124..618 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16812.1.1prot_P-wetherbeei_contig16812.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig16812 124..618 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig16812.1.1

>prot_P-wetherbeei_contig16812.1.1 ID=prot_P-wetherbeei_contig16812.1.1|Name=mRNA_P-wetherbeei_contig16812.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=165bp
LFIPPILIFSVVAGGVTLDRQREKQRSLLSGVFESQPTLVAARAEGRVGK
ISSPEGTLVKSGDLLLTLDAKPGQSDAAALESKVREARAHYQELKAGPRR
EDIRRQEATVAELRAALERLENGNRPAEIATAKARWVQAEAAYRKAVNGP
RRQDVQRLQAAADQA
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mRNA from alignment at P-wetherbeei_contig16812:124..618-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig16812.1.1 ID=mRNA_P-wetherbeei_contig16812.1.1|Name=mRNA_P-wetherbeei_contig16812.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=495bp|location=Sequence derived from alignment at P-wetherbeei_contig16812:124..618- (Phaeothamnion wetherbeei SAG_119_79)
CTCTTCATCCCCCCCATCCTGATCTTCTCCGTCGTGGCCGGCGGAGTCAC
TCTAGACCGCCAGCGCGAGAAGCAGCGCAGTCTCCTCAGCGGGGTCTTCG
AGTCCCAGCCCACACTGGTGGCCGCCCGCGCCGAGGGTCGCGTCGGCAAA
ATCTCCTCCCCCGAGGGCACCCTCGTGAAAAGTGGCGATCTGCTTCTCAC
TCTCGATGCTAAACCAGGCCAGAGCGATGCCGCCGCCCTCGAGAGCAAAG
TTCGCGAAGCCCGCGCCCATTATCAAGAACTCAAGGCCGGCCCGCGCCGC
GAAGATATCCGCCGCCAGGAGGCGACGGTGGCCGAGCTCCGCGCAGCTTT
AGAACGCCTGGAGAACGGCAATCGACCCGCCGAAATCGCTACCGCCAAAG
CTCGCTGGGTGCAGGCTGAAGCCGCCTATCGCAAAGCCGTCAACGGCCCC
CGCCGCCAGGATGTGCAACGTTTGCAGGCGGCGGCCGATCAGGCG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig16812:124..618-

>mRNA_P-wetherbeei_contig16812.1.1 ID=mRNA_P-wetherbeei_contig16812.1.1|Name=mRNA_P-wetherbeei_contig16812.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=495bp|location=Sequence derived from alignment at P-wetherbeei_contig16812:124..618- (Phaeothamnion wetherbeei SAG_119_79)
CTCTTCATCCCCCCCATCCTGATCTTCTCCGTCGTGGCCGGCGGAGTCAC
TCTAGACCGCCAGCGCGAGAAGCAGCGCAGTCTCCTCAGCGGGGTCTTCG
AGTCCCAGCCCACACTGGTGGCCGCCCGCGCCGAGGGTCGCGTCGGCAAA
ATCTCCTCCCCCGAGGGCACCCTCGTGAAAAGTGGCGATCTGCTTCTCAC
TCTCGATGCTAAACCAGGCCAGAGCGATGCCGCCGCCCTCGAGAGCAAAG
TTCGCGAAGCCCGCGCCCATTATCAAGAACTCAAGGCCGGCCCGCGCCGC
GAAGATATCCGCCGCCAGGAGGCGACGGTGGCCGAGCTCCGCGCAGCTTT
AGAACGCCTGGAGAACGGCAATCGACCCGCCGAAATCGCTACCGCCAAAG
CTCGCTGGGTGCAGGCTGAAGCCGCCTATCGCAAAGCCGTCAACGGCCCC
CGCCGCCAGGATGTGCAACGTTTGCAGGCGGCGGCCGATCAGGCG
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