mRNA_P-wetherbeei_contig168.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig168.3.1 vs. uniprot
Match: D8LHL4_ECTSI (DUF3342 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHL4_ECTSI) HSP 1 Score: 258 bits (659), Expect = 1.460e-73 Identity = 130/203 (64.04%), Postives = 157/203 (77.34%), Query Frame = 3
Query: 222 SPPSLPSPPRMDVTRAVSILISSEFLRMDRLVAECLAFVAANLGEIVKLPIDLACLNDAMVVRLARLATLEQLARARDRRDKLLSRVFKKRIELDFRDRSV--SNTVLCCRYCRRLYPESAAATLSCAAAPPVIDFRGAIVRRHDRLRPWSLTQLVTSLHRRGMSWTQVYWLLWGLTKPLRCVRCSQVFPAGDIGCCRHGPEM 824
S P + PP ++V AVSILISS+FL+M RLVAECL FV +L EIVKLPIDL+CLND MV++LA++ TL+QLA A+DR+DKLLSRV KKRIE+DFRDRS N + CCRYC L+ E +SC AAPP + FRG ++RRH+ L PWSLT+ VTSLHR+GMSWT VYW LWGLT+PL CVRC +VF AGDIG CR P+
Sbjct: 392 SRPDMAGPPPLEVPLAVSILISSDFLQMQRLVAECLGFVGEHLTEIVKLPIDLSCLNDKMVLQLAKIVTLDQLAVAKDRKDKLLSRVHKKRIEIDFRDRSPHSDNAIHCCRYCAGLFSEKVRDVMSCRAAPPTVSFRGQLLRRHEPLSPWSLTRTVTSLHRKGMSWTAVYWFLWGLTQPLYCVRCREVFLAGDIGHCRSHPQQ 594
BLAST of mRNA_P-wetherbeei_contig168.3.1 vs. uniprot
Match: A0A835YQX4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQX4_9STRA) HSP 1 Score: 221 bits (563), Expect = 5.210e-60 Identity = 116/213 (54.46%), Postives = 142/213 (66.67%), Query Frame = 3
Query: 243 PPRMDVTRAVSILISSEFLRMDRLVAECLAFVAANLGEIVKLPIDLACLNDAMVVRLARLATLEQLARARDRRDKLLSRVFKKRIELDFRDRSVSNTVLCCRYCRRLYPESAAAT-----------------------------LSCAAAPPVIDFRGAIVRRHDRLRPWSLTQLVTSLHRRGMSWTQVYWLLWGLTKPLRCVRCSQVFPAGD 794
PP+++V VS+LISS+FL+M LVAECLAFVA N E+V+LPIDLACL DAMV +ARL TL +LA ARDRRDKLLSRVFKKR+E+++RDRS V CCR+C LY E + L+CA APP++D RG +VRRH RPWSLT LV +LH RGM+WT+VYWLLWG T+ LRC RC + F A +
Sbjct: 225 PPQLEVANVVSVLISSDFLKMAALVAECLAFVARNFSEVVRLPIDLACLTDAMVGAVARLMTLRELAAARDRRDKLLSRVFKKRLEVEYRDRSGDRAVRCCRHCAALYTERPHGSGSXXXXXXXXXXXXXXXXXXXXXXXXXXALTCARAPPLVDARGRLVRRHAPARPWSLTALVAALHARGMTWTEVYWLLWGATRTLRCRRCGEAFTASE 437
BLAST of mRNA_P-wetherbeei_contig168.3.1 vs. uniprot
Match: A0A7S3ZMG3_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZMG3_9STRA) HSP 1 Score: 186 bits (472), Expect = 6.610e-48 Identity = 100/195 (51.28%), Postives = 128/195 (65.64%), Query Frame = 3
Query: 243 PPRMDVTRAVSILISSEFLRMDRLVAECLAFVAANLGEIVKLPIDLACLNDAMVVRLARLATLEQLARARDRRDKLLSRVFKKRIELDFRDRSVSNT--VLCCRYCRRLYPESAAATLSCAAAPPVIDFRGAIVRRHDRLRP-WSLTQLVTSLHRRGMSWTQVYWLLWGLTKPLRCVRCSQVFPAGDIGCCRHGP 818
PP +D + VSILISSEFL M LV CL F+AA++GEI+++PIDLAC++DA+V RLA L E L D +DKLL +++K+R+ELDFR S +N +L CR+C RLYP A LSCA APP ID RG + RH+ + WSLT+ V LH GM W +VYW +W T RC C + F A D+ CRH P
Sbjct: 187 PPPLDASSVVSILISSEFLEMANLVEHCLKFMAAHVGEILEMPIDLACVSDALVQRLAALCPAEVLCDLTDAKDKLLPKLYKRRLELDFRHSSKANKRDILKCRHCDRLYPAWAQTKLSCAKAPPRIDRRGHLCLRHEPVEERWSLTEYVGELHAAGMPWEEVYWTMWAATHIFRCTACDEWFGAADMENCRHHP 381
BLAST of mRNA_P-wetherbeei_contig168.3.1 vs. uniprot
Match: A0A7S1XVF4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XVF4_9STRA) HSP 1 Score: 177 bits (450), Expect = 4.580e-44 Identity = 91/196 (46.43%), Postives = 129/196 (65.82%), Query Frame = 3
Query: 231 SLPSPPRMDVTRAVSILISSEFLRMDRLVAECLAFVAANLGEIVKLPIDLACLNDAMVVRLARLATLEQLARARDRRDKLLSRVFKKRIELDFRDRS--VSNTVLCCRYCRRLYPESAAATLSCAAAPPVIDFRGAIVRRHDRLRPWSLTQLVTSLHRRGMSWTQVYWLLWGLTKPLRCVRCSQVFP-AGDIGCCR 809
S+ SPP++D + +SILISS+FL+MD L CL ++ A+L E++++PID+ C+ D ++VRLA L E LA RD+RDKLLS+++KKRIE+DFR+R V +++ CRYC + + + A L C AAP +DF G +V RH WSLT+ V LH +G+SW ++YW LWGLT C C F AG C+
Sbjct: 375 SVNSPPKLDPSCVISILISSDFLQMDPLTELCLKYITAHLSEVIRVPIDMGCIKDELLVRLAALTEPEVLAYTRDKRDKLLSKLYKKRIEMDFRERQKGVPHSISACRYCLQPFATKSEAQLRCPAAPISVDFAGGLVARHAPAGGWSLTKFVGGLHNKGISWERIYWYLWGLTHHFNCSACGLTFNGAGAANLCQ 570
BLAST of mRNA_P-wetherbeei_contig168.3.1 vs. uniprot
Match: A0A7S2SHR3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SHR3_9STRA) HSP 1 Score: 174 bits (440), Expect = 4.740e-43 Identity = 86/201 (42.79%), Postives = 131/201 (65.17%), Query Frame = 3
Query: 240 SPPRMDVTRAVSILISSEFLRMDRLVAECLAFVAANLGEIVKLPIDLACLNDAMVVRLARLATLEQLARARDRRDKLLSRVFKKRIELDFRD-------RSVSNTVLCCRYCRRLYPESAAATLSCAAAPPVIDFRGAIVRRHDRLRPWSLTQLVTSLHRRGMSWTQVYWLLWGLTKPLRCVRCSQVFPAGDIGCCRHGPE 821
SPP+++ VSILISS+FL M++LV CL +++ L EIVK+P+DL+C+++ +V RL+ L L +D++DKL+S+++K+R+E+DFR+ R + + CCR+C RL+ A L C AP +DFRGA++ RH L WSLT+ V+ LH+ GMSW ++YWLLWG++ C + F A ++ RH PE
Sbjct: 236 SPPKLEPATVVSILISSDFLEMEKLVTHCLRYMSRRLPEIVKMPLDLSCISEKLVQRLSELVDASLLVGLKDKKDKLMSKLYKRRLEIDFRNPPLDSKKRQGYSKICCCRWCGRLFHFGAMDILDCPRAPSAVDFRGAVISRHMPLEIWSLTECVSRLHKNGMSWEEIYWLLWGVSHIFYCSESRRNFMALELSHRRHHPE 436
BLAST of mRNA_P-wetherbeei_contig168.3.1 vs. uniprot
Match: F0YN17_AURAN (DUF3342 domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YN17_AURAN) HSP 1 Score: 153 bits (386), Expect = 3.770e-36 Identity = 94/236 (39.83%), Postives = 127/236 (53.81%), Query Frame = 3
Query: 243 PPRMDVTRAVSILISSEFLRMDRLVAECLAFVAANLGEIVKLPIDLACLNDAMVVRLARLATLEQLARARDRRDKLLSRVFKKRIELDFRDRS------------------------------------------VSNTVLCCRYCRRLYPESAAATLSCAAAPPVIDFRGAIVRRHDR-LRPWSLTQLVTSLHRRGMSWTQVYWLLWGLTKPLRCVRCSQVFPAGDIGCCRHGPE 821
PP +D + VSILISSEFL M+RLV CL + PIDLAC+++ +V+RLA L T E LA D++DKLL +++K+R+E+DFR R VS +L CR+C +LYP A L CA AP ++D RGA+ RH L WSLT+ V +LH GM+W +VYWL+WG+T RC C++ F A D+G C + E
Sbjct: 87 PPPLDSSSVVSILISSEFLEMERLVEHCLRHM----------PIDLACVSEKLVLRLAELCTAEVLASLSDKKDKLLPKLYKRRLEIDFRHRHAEARKDRDAKEPDKKPGAKRDGDEKKDGDLRAPASGGPSEKPVSREILRCRHCAKLYPAWAQKWLPCADAPFLVDGRGALASRHAPVLERWSLTEHVGALHALGMTWEEVYWLMWGVTHVFRCSACAKWFGADDLGRCLYHEE 312
BLAST of mRNA_P-wetherbeei_contig168.3.1 vs. uniprot
Match: A0A7S4HC00_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4HC00_GUITH) HSP 1 Score: 151 bits (382), Expect = 1.390e-35 Identity = 77/195 (39.49%), Postives = 117/195 (60.00%), Query Frame = 3
Query: 240 SPPRMDVTRAVSILISSEFLRMDRLVAECLAFVAANLGEIVKLPIDLACLNDAMVVRLARLATLEQLARARDRRDKLLSRVFKKRIELDFRDRSVSNTVLCCRYCRRLYPESAAATLSCAAAPPVIDFRGAIVRRHDRLRPWSLTQLVTSLHRRGMSWTQVYWLLWGLTKPLRCVRCSQVFPAGDIGCCRHGPEM 824
SPP +D T +SILISS+FL+M +LV CL FV N EI+K+PIDL CLN ++ +L+ T E+L DRRDKLLSR++ K+IE F+ S N + C +C +L+ + ++C+ A IDF G+++ H + W + + + SL R +SW ++YW +WG+ +RC C F A ++ C P+
Sbjct: 273 SPPPLDTTNVISILISSQFLKMQKLVELCLQFVCRNANEILKMPIDLNCLNQELLTKLSAYLTPEELEDLNDRRDKLLSRLYMKKIEALFQ--SDDNMISRCAFCGKLFALKNRSKMACSKAKIFIDFNGSVIAEHAPVPNWDVNKYLLSLRARKLSWREIYWKIWGMIATMRCKVCGNYFTASELEHCAFCPQQ 465
BLAST of mRNA_P-wetherbeei_contig168.3.1 vs. uniprot
Match: A0A7S0HLC3_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HLC3_9CRYP) HSP 1 Score: 147 bits (372), Expect = 2.900e-34 Identity = 75/195 (38.46%), Postives = 116/195 (59.49%), Query Frame = 3
Query: 240 SPPRMDVTRAVSILISSEFLRMDRLVAECLAFVAANLGEIVKLPIDLACLNDAMVVRLARLATLEQLARARDRRDKLLSRVFKKRIELDFRDRSVSNTVLCCRYCRRLYPESAAATLSCAAAPPVIDFRGAIVRRHDRLRPWSLTQLVTSLHRRGMSWTQVYWLLWGLTKPLRCVRCSQVFPAGDIGCCRHGPEM 824
+PP +D T +SILISS+FL+M +LV CL FV N EI+K+PIDL CLN ++ +L+ T E+L DRRDKLLSR++ K+IE F+ S N + C +C +L+ + ++C+ A IDF G+++ H + W + + + SL R +SW ++YW +WG+ + C C F A ++ C P+
Sbjct: 275 APPPLDTTNVISILISSQFLKMQKLVDLCLQFVCRNANEILKMPIDLNCLNQELLTKLSAYLTAEELEEWNDRRDKLLSRLYMKKIEALFQ--SDENMISRCAFCGKLFALKNKSKMACSKAKIFIDFNGSVIVEHVPVPNWDVNKYLLSLRARKLSWREIYWKIWGMIATMHCKVCGNFFTASELEHCAFCPQQ 467
BLAST of mRNA_P-wetherbeei_contig168.3.1 vs. uniprot
Match: A0A8B7Y044_ACAPL (uncharacterized protein KIAA1841 homolog n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7Y044_ACAPL) HSP 1 Score: 145 bits (365), Expect = 1.280e-33 Identity = 75/192 (39.06%), Postives = 107/192 (55.73%), Query Frame = 3
Query: 246 PRMDVTRAVSILISSEFLRMDRLVAECLAFVAANLGEIVKLPIDLACLNDAMVVRLARLATLEQLARARDRRDKLLSRVFKKRIELDFRDRSVSNTVLCCRYCRRLYPESAAATLSCAAAPPVIDFRGAIVRRHDRLRPWSLTQLVTSLHRRGMSWTQVYWLLWGLTKPLRCVRCSQVFPAGDIGCCRHGPE 821
P ++ + +SILISS+FL+MD LV EC+ F N+ IV P ++ C+ND + R+A L T ++ +DR+DK S++F K+IE F + T+ C YCRRL E + L C + ID +G +V H R W + + +L SW +VYW LW L C RC QVFP ++G CR PE
Sbjct: 227 PNLEASNVISILISSDFLKMDSLVNECIDFCHKNMSAIVATPCNMNCINDKLCTRIADLFTDLEVDEVKDRKDKFKSKLFSKKIEAMFEGTKPATTLYRCLYCRRLLTEELRSKLKCISTRMSIDRQGNVVYHHQRDPAWDVNDYILALRSELKSWREVYWRLWATVTHLPCSRCKQVFPCSELGHCRFHPE 418
BLAST of mRNA_P-wetherbeei_contig168.3.1 vs. uniprot
Match: A0A1R2ARR5_9CILI (Uncharacterized protein n=2 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2ARR5_9CILI) HSP 1 Score: 141 bits (356), Expect = 5.360e-33 Identity = 72/187 (38.50%), Postives = 112/187 (59.89%), Query Frame = 3
Query: 246 PRMDVTRAVSILISSEFLRMDRLVAECLAFVAANLGEIVKLPIDLACLNDAMVVRLARLATLEQLARARDRRDKLLSRVFKKRIELDFRDRSVSNTVLCCRYCRRLYPESAAATLSCAAAPPVIDFRGAIVRRHDRLRPWSLTQLVTSLHRRGMSWTQVYWLLWGLTKPLRCVRCSQVFPAGDIGCC 806
P +++ + +SILISSEFL+M LV +CL FVA NL E+VKLPID++CLN ++ +L+++ E L +DR+DKL+S+V+ K++E D + N C YC +LY + + C A IDF G ++ +H R W + + + L +G+SW VYW +WG C+ C+ F ++G C
Sbjct: 144 PFLEMNKVISILISSEFLQMQELVTQCLEFVAKNLEEVVKLPIDMSCLNQNLLKQLSKMIVPEILDDIKDRKDKLVSKVYMKKLEEFLEDEN--NMFSRCVYCNKLYTSAQHEWMICEKAQIFIDFHGNVIAQHIPDRNWDMNKFLLFLKEQGLSWRDVYWRIWGRLPYFSCINCNSTFIGSELGHC 328 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig168.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig168.3.1 >prot_P-wetherbeei_contig168.3.1 ID=prot_P-wetherbeei_contig168.3.1|Name=mRNA_P-wetherbeei_contig168.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=235bp MDVTRAVSILISSEFLRMDRLVAECLAFVAANLGEIVKLPIDLACLNDAMback to top mRNA from alignment at P-wetherbeei_contig168:1452..3469- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig168.3.1 ID=mRNA_P-wetherbeei_contig168.3.1|Name=mRNA_P-wetherbeei_contig168.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2018bp|location=Sequence derived from alignment at P-wetherbeei_contig168:1452..3469- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig168:1452..3469- >mRNA_P-wetherbeei_contig168.3.1 ID=mRNA_P-wetherbeei_contig168.3.1|Name=mRNA_P-wetherbeei_contig168.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=705bp|location=Sequence derived from alignment at P-wetherbeei_contig168:1452..3469- (Phaeothamnion wetherbeei SAG_119_79)back to top |