mRNA_P-wetherbeei_contig16798.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig16798.2.1 vs. uniprot
Match: UPI001E4A44B8 (hypothetical protein n=1 Tax=Leptospira sp. severe_002 TaxID=2838237 RepID=UPI001E4A44B8) HSP 1 Score: 239 bits (611), Expect = 4.220e-78 Identity = 122/151 (80.79%), Postives = 133/151 (88.08%), Query Frame = 1
Query: 4 KSIAVWDVPMPVAIGGTFAIKVGGAKGAKVEVTYATGKVVASGALGSEPLAGTEGLYWTSLDVPSPAKAEVAQYTVRAGDATSLFSVAAAPKPEHTLTVTIVERETKEALGGVEIRLGAFHARTDKAGRAEVRIAKGDYQLKLWRNGHIAP 456
KS+AVWDVPMPVAIG F IKVGGAKGAKVEV+ A+GKVVASG +GSEPLAGTEGLYWTSLDVP+PAK EV +YTV A A + F+VAAAPK EHTLTV+IVERET EAL GVEIRLGAFH RTDK GRA VR+AKG+YQLKLWRNGHIAP
Sbjct: 5 KSLAVWDVPMPVAIGENFPIKVGGAKGAKVEVSNASGKVVASGTIGSEPLAGTEGLYWTSLDVPAPAKEEVKEYTVHADGAETRFAVAAAPKAEHTLTVSIVERETSEALDGVEIRLGAFHTRTDKQGRASVRVAKGNYQLKLWRNGHIAP 155
BLAST of mRNA_P-wetherbeei_contig16798.2.1 vs. uniprot
Match: A0A127END3_9HYPH (Uncharacterized protein n=1 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A127END3_9HYPH) HSP 1 Score: 165 bits (418), Expect = 1.360e-48 Identity = 92/165 (55.76%), Postives = 111/165 (67.27%), Query Frame = 1
Query: 1 TKSIAVWDVPMPVAIGGTFAIKVGGAK-------GAKVEVTYATGKVVASGALGSEPLAGTEGLYWTSLDVPSPAKAEVAQYTVRAGDATSL-------FSVAAAPKPEHTLTVTIVERETKEALGGVEIRLGAFHARTDKAGRAEVRIAKGDYQLKLWRNGHIA 453
T S+AVWDVPMPV G F IKVG G +V VT A G + ASGALG PL GTE LYWT+L+V +P + + +Y VR ++ FSVA APKPEH L VT+ ER++ EALG VEIRLG FHARTDK+GRAE+++ KGDYQL+LWR HIA
Sbjct: 6 TISLAVWDVPMPVTAGEKFTIKVGAKSSSRRELDGYRVAVTDALGALAASGALGQTPLPGTEALYWTTLEVAAPTR-QANEYEVRLIPGATIDEAVATRFSVAMAPKPEHKLRVTVTERDSAEALGDVEIRLGPFHARTDKSGRAELQLCKGDYQLQLWRTAHIA 169
BLAST of mRNA_P-wetherbeei_contig16798.2.1 vs. uniprot
Match: A0A2V8KZG0_9BACT (Uncharacterized protein n=6 Tax=unclassified Acidobacteria TaxID=305072 RepID=A0A2V8KZG0_9BACT) HSP 1 Score: 109 bits (272), Expect = 1.290e-26 Identity = 63/156 (40.38%), Postives = 93/156 (59.62%), Query Frame = 1
Query: 7 SIAVWDVPMPVAIGGTFAIKVGG--AKGAK-----VEVTYATGKVVASGALGSEPLAGTEGLYWTSLDVPSPAKAEVAQYTVRA--GDATSLFSVAAAPKPEHTLTVTIVERETKEALGGVEIRLGAFHARTDKAGRAEVRIAKGDYQLKLWRNGH 447
SIAVWD+ P+ IG T +KVG A G + VE+ A+GK +A LG P GT GLYWT ++ P+PA+A +++ + G A S FS A P+H++T+ + ++ TKE + VEIRLG + + T+ G A V + KG Y L +W+ G+
Sbjct: 14 SIAVWDLVSPLVIGRTAKVKVGAKCAAGCQLTNHGVEIHDASGKTIARPVLGGTPWPGTSGLYWTDVEFPAPAEAGTHTFSLTSEHGGAHSEFSFIAVKPPDHSVTIQVHDKTTKETIADVEIRLGVYRSITNARGLATVDVPKGSYALTVWKLGY 169
BLAST of mRNA_P-wetherbeei_contig16798.2.1 vs. uniprot
Match: A0A1F2S9H7_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18 TaxID=1797185 RepID=A0A1F2S9H7_9BACT) HSP 1 Score: 97.4 bits (241), Expect = 6.680e-22 Identity = 59/169 (34.91%), Postives = 90/169 (53.25%), Query Frame = 1
Query: 7 SIAVWDVPMPVAIGGTFAIKVGGA-------KGAKVEVTYATGKVVASGALGSEPLAGTEGLYWTSLDVPSPAKAEVAQYT---------VRAGDATSLFSVAAAPKPEHTLTVTIVERETKEALGGVEIRLGAFHARTDKAGRAEVRIAKGDYQLKLWRNGH-IAPRT 462
S+AVWD+P PV G +F KVG A G VEV G + G LG P GT LY + + +PA V ++ V DA++ F+ AP+P+H +T+++ ++ETK+ L V++R+G + A TD G A + + +G Y L W+ G+ APR+
Sbjct: 14 SVAVWDLPSPVVAGASFTAKVGIACEVACPLAGQLVEVRDEAGARIGQGRLGETPWPGTAALYVAEVTLTAPAIEGVRSWSAVCRAPESGVPHADASATFTFRVAPRPDHRVTISVTDKETKKPLEDVDVRMGPYRASTDAGGVAHLAVPRGVYALDAWKLGYETAPRS 182
BLAST of mRNA_P-wetherbeei_contig16798.2.1 vs. uniprot
Match: A0A2V8JNB0_9BACT (Uncharacterized protein n=2 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8JNB0_9BACT) HSP 1 Score: 95.9 bits (237), Expect = 2.080e-21 Identity = 57/156 (36.54%), Postives = 85/156 (54.49%), Query Frame = 1
Query: 7 SIAVWDVPMPVAIGGTFAIKVGGAKGAKVEVTY-------ATGKVVASGALGSEPLAGTEGLYWTSLDVPSPAKAEVAQYTVRA--GDATSLFSVAAAPKPEHTLTVTIVERETKEALGGVEIRLGAFHARTDKAGRAEVRIAKGDYQLKLWRNGH 447
SIAVW++ P+ IG T IKVG A ++T A G+V+A G+ GT GLYW ++ +P +A ++V G+A S FS PEH+LT+ I ++ TKE + VEIRLG + + +++ G A + KG Y L W+ G+
Sbjct: 14 SIAVWELVSPLVIGRTTKIKVGAKCSAGCQLTDHEISIHDAAGQVIARAGFGATAWPGTSGLYWVDIEFRAPTEAGTHTFSVECEHGEAYSEFSFITVEPPEHSLTIQIYDKATKEPIPEVEIRLGVYRSISNERGLARIDAPKGSYTLTAWKLGY 169
BLAST of mRNA_P-wetherbeei_contig16798.2.1 vs. uniprot
Match: A0A352VMU6_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A352VMU6_9BACT) HSP 1 Score: 83.6 bits (205), Expect = 1.420e-16 Identity = 59/166 (35.54%), Postives = 78/166 (46.99%), Query Frame = 1
Query: 1 TKSIAVWDVPMPVAIGGTFAIKVG-------GAKGAKVEVTYATGKVVASGALGSEPLAGTEGLYWTSLDVPSPAKAEVAQYTV-------------RAGDATSLFSVAAAPKPEHTLTVTIVERETKEALGGVEIRLGAFHARTDKAGRAEVRIAKGDYQLKLWR 438
T S+A+W VP P+ G F + VG G VE+ G + G LG EP T GLY + + +P + V +V AGD F+ PEHT+TV +V E LG +E+RLG + A TD G A V +AKG Y+L LWR
Sbjct: 16 TTSMAIWGVPTPMK-GSRFTVNVGIKCSALCPLGGQLVEIWDGEGVKLGEGRLGDEPRPDTVGLYEGEVTLTAPDRTGVFSASVGFSPDELDLPHVDTAGD----FTFRCVELPEHTVTVRVVHEEIDAPLGDIEVRLGPYQAMTDSEGVAGVAVAKGTYELSLWR 176
BLAST of mRNA_P-wetherbeei_contig16798.2.1 vs. uniprot
Match: A0A8H9WPA6_9BACT (Uncharacterized protein n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A8H9WPA6_9BACT) HSP 1 Score: 83.6 bits (205), Expect = 6.770e-16 Identity = 59/166 (35.54%), Postives = 78/166 (46.99%), Query Frame = 1
Query: 1 TKSIAVWDVPMPVAIGGTFAIKVG-------GAKGAKVEVTYATGKVVASGALGSEPLAGTEGLYWTSLDVPSPAKAEVAQYTV-------------RAGDATSLFSVAAAPKPEHTLTVTIVERETKEALGGVEIRLGAFHARTDKAGRAEVRIAKGDYQLKLWR 438
T S+A+W VP P+ G F + VG G VE+ G + G LG EP T GLY + + +P + V +V AGD F+ PEHT+TV +V E LG +E+RLG + A TD G A V +AKG Y+L LWR
Sbjct: 119 TTSMAIWGVPTPMK-GSRFTVNVGIKCSALCPLGGQLVEIWDGEGVKLGEGRLGDEPRPDTVGLYEGEVTLTAPDRTGVFSASVGFSPDELDLPHVDTAGD----FTFRCVELPEHTVTVRVVHEEIDAPLGDIEVRLGPYQAMTDSEGVAGVAVAKGTYELSLWR 279
BLAST of mRNA_P-wetherbeei_contig16798.2.1 vs. uniprot
Match: A0A6L8DUZ3_9BACT (Carboxypeptidase regulatory-like domain-containing protein n=2 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A6L8DUZ3_9BACT) HSP 1 Score: 58.2 bits (139), Expect = 7.280e-7 Identity = 27/73 (36.99%), Postives = 43/73 (58.90%), Query Frame = 1
Query: 256 FSVAAAPKPEHTLTVTIVERETKEALGGVEIRLGAFHARTDKAGRAEVRIAKGDYQLKLWRNGHIAPRTGRSP 474
F A +PEH +TVT+V+R+T+ + G E+R+G + TD +G+A V + G Y L + + G+ P R P
Sbjct: 180 FGFRAVTRPEHRVTVTVVDRDTETRVAGAEVRVGVYRGTTDASGQAHVAVHPGSYDLYVRKAGY-QPHADRIP 251 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16798.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig16798.2.1 >prot_P-wetherbeei_contig16798.2.1 ID=prot_P-wetherbeei_contig16798.2.1|Name=mRNA_P-wetherbeei_contig16798.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=157bp MPVAIGGTFAIKVGGAKGAKVEVTYATGKVVASGALGSEPLAGTEGLYWTback to top mRNA from alignment at P-wetherbeei_contig16798:713..1260- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig16798.2.1 ID=mRNA_P-wetherbeei_contig16798.2.1|Name=mRNA_P-wetherbeei_contig16798.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=548bp|location=Sequence derived from alignment at P-wetherbeei_contig16798:713..1260- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig16798:713..1260- >mRNA_P-wetherbeei_contig16798.2.1 ID=mRNA_P-wetherbeei_contig16798.2.1|Name=mRNA_P-wetherbeei_contig16798.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=471bp|location=Sequence derived from alignment at P-wetherbeei_contig16798:713..1260- (Phaeothamnion wetherbeei SAG_119_79)back to top |