mRNA_P-wetherbeei_contig16785.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig16785.1.1
Unique NamemRNA_P-wetherbeei_contig16785.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig16785.1.1 vs. uniprot
Match: UPI0019BE5034 (PAS domain S-box protein n=1 Tax=Bacteriovorax sp. TaxID=2608087 RepID=UPI0019BE5034)

HSP 1 Score: 647 bits (1669), Expect = 1.590e-221
Identity = 344/486 (70.78%), Postives = 394/486 (81.07%), Query Frame = 1
Query:   25 GVTPQRVLGIVTDITEQKSADEARLRAQRLESENRQIQEANRLKSQFLANMSHELRTPLNAIIGFADLLHANAVPPESPKHRVFLGHISTSGHHLLQLINDVLDLSKVESGKFEFTPEPVHLPALVKEVSDTLNTAVLRKRIRVNTAVDPTLTDLVLDVARLKQVLFNYLSNAIKFTPVGGHVTVRARAEGATHFRLEVEDDGIGIAAADLPRLFSEFQQLDAGYNKRHQGTGLGLALTRRLVQAQGGSVGVRSTVGHGSVFHAVLNRVHGTDACLAEAALAQPAAGPPANRWLVIEDDPRDQDRLFHALSEAGFDVDVATTGEQALRHASGRTYDAITLDLMLPDQHGLGVLANIRSHGPSRTAPVVGMTMPADSGTVAGFSIADVLSKPIRTEEIVLAMARFRRREPDRAKVMVIDDDPLALDLMRSTLKGLGIETVGLLDGRLALSEIDQHRPDAIILDLMMPGFDGFAVMDGLHRLPQWQAT 1482
            G TP  +LGIV+DIT Q  A+ ARL AQRLE+ENRQIQEA+RLKSQFLANMSHELRTPLNAIIGF+DLL + AV P+SPKH  FLGHI TSG HLLQLINDVLDLSKVESGKF+F PEPVHLP LVKE SD L+TA+ RKRI V   +DP ++DLV+D ARLKQVL+NYLSNAIKFTP GG VT+RARAEG  H R+EVED GIGIAAADLPRLF+EF QLDAGY+K HQGTGLGLALTRRLVQAQGGSVGV ST G GSVFH VL RVH  D      A   P    P +R+LVIE D  +Q ++  AL++AGF VD A+TGEQAL HASG  YDAITL+L++PD+ GLGVLA+IR  G SR +PVVGMTMPA +G+ A FSIADVL KP+RT+EI+ AM RFR   P R KV+VI DDPLALDLM +TLKG+GI++VG+LDGR AL +I+QHRPD IILDLMMPGFDGFAV+D L  +P W+ T
Sbjct:  477 GGTPH-LLGIVSDITAQSLAEVARLTAQRLEAENRQIQEASRLKSQFLANMSHELRTPLNAIIGFSDLLSSGAVSPQSPKHATFLGHIGTSGRHLLQLINDVLDLSKVESGKFDFFPEPVHLPLLVKEASDILHTAIQRKRIHVAVEIDPAVSDLVIDPARLKQVLYNYLSNAIKFTPEGGSVTLRARAEGDAHLRIEVEDTGIGIAAADLPRLFTEFLQLDAGYSKEHQGTGLGLALTRRLVQAQGGSVGVSSTPGVGSVFHFVLKRVHAADVPQQLVAAPMPPPTVPEHRFLVIEVDHGNQLQVVGALTDAGFLVDAASTGEQALLHASGTAYDAITLNLVMPDRTGLGVLASIRHGGLSRASPVVGMTMPASAGSAAAFSIADVLCKPVRTDEIIAAMTRFRVAAPARTKVLVIGDDPLALDLMHATLKGIGIDSVGVLDGRDALRDIEQHRPDVIILDLMMPGFDGFAVLDALGGMPAWRDT 961          
BLAST of mRNA_P-wetherbeei_contig16785.1.1 vs. uniprot
Match: A0A1H0GUE5_9BURK (Histidine kinase n=1 Tax=Rhodoferax sp. OV413 TaxID=1855285 RepID=A0A1H0GUE5_9BURK)

HSP 1 Score: 600 bits (1546), Expect = 3.110e-204
Identity = 325/491 (66.19%), Postives = 379/491 (77.19%), Query Frame = 1
Query:    7 GSVVRDGVTPQRVLGIVTDITEQKSADEARLRAQRLESENRQIQEANRLKSQFLANMSHELRTPLNAIIGFADLLHANAVPPESPKHRVFLGHISTSGHHLLQLINDVLDLSKVESGKFEFTPEPVHLPALVKEVSDTLNTAVLRKRIRVNTAVDPTLTDLVLDVARLKQVLFNYLSNAIKFTPVGGHVTVRARAEGATHFRLEVEDDGIGIAAADLPRLFSEFQQLDAGYNKRHQGTGLGLALTRRLVQAQGGSVGVRSTVGHGSVFHAVLNRVHGTDACL-AEAALAQPAAGPPANRWLVIEDDPRDQDRLFHALSEAGFDVDVATTGEQALRHASGRTYDAITLDLMLPDQHGLGVLANIRSHGPSRTAPVVGMTMPADSGTVAGFSIADVLSKPIRTEEIVLAMARFRRREPDRAKVMVIDDDPLALDLMRSTLKGLGIETVGLLDGRLALSEIDQHRPDAIILDLMMPGFDGFAVMDGLHRLPQWQ 1476
            GSV   G    R+LGIV+DITEQ+ A+ ARL AQRLE+ENRQIQEA+RLKSQFLANMSHELRTPLNA+IGFADLLH+  V P+SPKH+ FLGHI TSG HLLQLINDVLDLSKVESGKF+F PEPV L  ++KEV D L+TA+L+K I +   ++P +  L LD ARLKQVL+NYLSNAIKFT  GG V+VRA A+G  H R+EVED GIGIA ADLPRLF+EFQQLDAGY+K+HQGTGLGLALTRRLVQAQGG VGVRSTV  GSVF+ VLNR+HG D    A  AL   AA   A R LVIEDD RD+ RL   LSEAGF VD A+ G  ALR A    Y A+ LDL LPD+ GL +LA+IRS G S  +PV+G++MP      A F+IA+VL KPIR++EI+ AMARFR     RA V+VIDD+P ALDLM++TLK +GI+ V  LDGR AL +I  HRPDAIILDLMMPGFDGF V+D L +LP W+
Sbjct:  376 GSVQHQGDKASRMLGIVSDITEQRQAEHARLIAQRLEAENRQIQEASRLKSQFLANMSHELRTPLNAVIGFADLLHSGMVKPDSPKHQEFLGHIGTSGRHLLQLINDVLDLSKVESGKFDFYPEPVDLGTVLKEVEDILHTAILQKHIHLAFDIEPDMGVLTLDPARLKQVLYNYLSNAIKFTADGGQVSVRAMAQGPDHLRIEVEDSGIGIAPADLPRLFTEFQQLDAGYSKQHQGTGLGLALTRRLVQAQGGQVGVRSTVDVGSVFYVVLNRIHGLDLQRSASGALGDEAAE--AQRILVIEDDQRDRARLIEVLSEAGFHVDAASDGPYALRQARDTAYAALMLDLQLPDRRGLDLLADIRSRGASHGSPVLGVSMPISPDRSASFAIANVLCKPIRSDEILAAMARFRLEGAGRANVLVIDDEPAALDLMQATLKSIGIDAVCCLDGREALRDIALHRPDAIILDLMMPGFDGFQVLDALQQLPDWR 864          
BLAST of mRNA_P-wetherbeei_contig16785.1.1 vs. uniprot
Match: UPI001144C628 (PAS domain S-box protein n=1 Tax=Ideonella azotifigens TaxID=513160 RepID=UPI001144C628)

HSP 1 Score: 592 bits (1526), Expect = 2.080e-199
Identity = 322/490 (65.71%), Postives = 373/490 (76.12%), Query Frame = 1
Query:    7 GSVVRDGVTPQRVLGIVTDITEQKSADEARLRAQRLESENRQIQEANRLKSQFLANMSHELRTPLNAIIGFADLLHANAVPPESPKHRVFLGHISTSGHHLLQLINDVLDLSKVESGKFEFTPEPVHLPALVKEVSDTLNTAVLRKRIRVNTAVDPTLTDLVLDVARLKQVLFNYLSNAIKFTPVGGHVTVRARAEGATHFRLEVEDDGIGIAAADLPRLFSEFQQLDAGYNKRHQGTGLGLALTRRLVQAQGGSVGVRSTVGHGSVFHAVLNRVHGTDACLAEAALAQPAAGPPANRWLVIEDDPRDQDRLFHALSEAGFDVDVATTGEQALRHASGRTYDAITLDLMLPDQHGLGVLANIRSHGPSRTAPVVGMTMPADSGTVAGFSIADVLSKPIRTEEIVLAMARFRRREPDRAKVMVIDDDPLALDLMRSTLKGLGIETVGLLDGRLALSEIDQHRPDAIILDLMMPGFDGFAVMDGLHRLPQWQ 1476
            GSV R+G     + GIV DITEQ+ A+ ARL  QRLE+ENRQIQEA RLKSQFLANMSHELRTPLNA+IGFA+L+ +  V P+SPKH+ FLGHI+ SG +LLQLINDVLDLSKVESGKFEF PEP+ L +++KE    L++A  RK I ++ A+D  LTDL LD ARLKQVL+NYLSNAIKF+  GGHV VR  AEGA HFR+EVED GIGI+ ADLPRLF+EFQQLDAGY+K+HQGTGLGLALTRRLV+AQGG VGVRSTVG GSVFH VLNRVHG D   AEAA A+      A R LVIEDD RDQ  L  ALS+AGF+VD A  G  ALR A    Y A+TLDL LP   GL +L +IRS G S+ +PVVG+TMPAD    A F+IA+VL KPIR +EI  AM RFR   P RA VMVIDDD  +LDLM +TLK +GI+ V   DGR A+ EID  RPDAI+LDLMMP FDGF V+D L R+P W+
Sbjct:  525 GSVQREGGRATHMPGIVIDITEQREAERARLEVQRLEAENRQIQEATRLKSQFLANMSHELRTPLNAVIGFAELMQSGFVKPDSPKHQEFLGHIANSGRNLLQLINDVLDLSKVESGKFEFFPEPLDLASILKEAQAVLHSATSRKDIVISMAIDAGLTDLRLDPARLKQVLYNYLSNAIKFSASGGHVVVRVMAEGAEHFRVEVEDSGIGISPADLPRLFTEFQQLDAGYSKQHQGTGLGLALTRRLVEAQGGQVGVRSTVGVGSVFHVVLNRVHGQDTQRAEAA-ARRVQEREAGRVLVIEDDQRDQALLVDALSQAGFEVDAAADGPYALRRARETAYAALTLDLSLPGMRGLELLGDIRSRGASQASPVVGVTMPADLAMSATFAIANVLCKPIRGDEITSAMMRFRLPAPGRANVMVIDDDTASLDLMCATLKSIGIDAVCFQDGRQAMQEIDHCRPDAILLDLMMPEFDGFQVLDALQRMPAWR 1013          
BLAST of mRNA_P-wetherbeei_contig16785.1.1 vs. uniprot
Match: A0A257DDM3_9BURK (Histidine kinase n=1 Tax=Burkholderiales bacterium PBB1 TaxID=2015563 RepID=A0A257DDM3_9BURK)

HSP 1 Score: 582 bits (1499), Expect = 1.100e-195
Identity = 314/492 (63.82%), Postives = 371/492 (75.41%), Query Frame = 1
Query:    1 AQGSVVRDGVTPQRVLGIVTDITEQKSADEARLRAQRLESENRQIQEANRLKSQFLANMSHELRTPLNAIIGFADLLHANAVPPESPKHRVFLGHISTSGHHLLQLINDVLDLSKVESGKFEFTPEPVHLPALVKEVSDTLNTAVLRKRIRVNTAVDPTLTDLVLDVARLKQVLFNYLSNAIKFTPVGGHVTVRARAEGATHFRLEVEDDGIGIAAADLPRLFSEFQQLDAGYNKRHQGTGLGLALTRRLVQAQGGSVGVRSTVGHGSVFHAVLNRVHGTDACLAEAALAQPAAGPPANRWLVIEDDPRDQDRLFHALSEAGFDVDVATTGEQALRHASGRTYDAITLDLMLPDQHGLGVLANIRSHGPSRTAPVVGMTMPADSGTVAGFSIADVLSKPIRTEEIVLAMARFRRREPDRAKVMVIDDDPLALDLMRSTLKGLGIETVGLLDGRLALSEIDQHRPDAIILDLMMPGFDGFAVMDGLHRLPQWQ 1476
            A G V  D    +R+LGI+T++TEQ+ A++ RL+AQRLE+ENRQIQEANRLKSQFLANMSHELRTPLNA+IGFADLL +  VP E+PKH  FLGHI++SG HLLQLINDVLDLSKVESGKFEF PEP+ LP L+ EV+D L+TA+ RK IR+ T +DP LTDL LD +RLKQVL+NYLSNAIKFTP GG V+V A A GA HFR+EV D GIGI+  +LPRLF EFQQLDAGY+K+HQGTGLGLALTRRL++AQGGSVGVRSTVG GSVFHAVLNRVHGTDA      LAQ   G  A R LVIE D R  +++  AL+ +G   D A+TG  A+  A    Y AITL L L DQ GL  L  IR  G S  +PVVGM++PAD G  A F+I DVL KPI ++EI+ AMARFR        VMV+DDDP ALDLM++TL  +GI  V + DG  AL  +  HRPDA+ILDLMMPGFDGF V+  L + P+W+
Sbjct:  497 AHGKVQTDDAPTRRMLGIITEVTEQRLAEDIRLKAQRLEAENRQIQEANRLKSQFLANMSHELRTPLNAVIGFADLLQSGTVPAETPKHGQFLGHIASSGRHLLQLINDVLDLSKVESGKFEFFPEPLQLPTLLTEVTDVLHTAIQRKHIRLRTHIDPQLTDLHLDSSRLKQVLYNYLSNAIKFTPDGGTVSVHALAHGADHFRIEVHDTGIGISEDNLPRLFVEFQQLDAGYSKQHQGTGLGLALTRRLIEAQGGSVGVRSTVGVGSVFHAVLNRVHGTDAHRVTT-LAQ---GTTAYRVLVIEPDARHSEQMVQALAASGIQADAASTGALAMIQARSNAYAAITLGLRLSDQPGLSALDGIRREGASCDSPVVGMSVPADDGASATFAITDVLCKPIHSDEILKAMARFRGPASRATTVMVVDDDPRALDLMQATLASIGIGAVCVPDGHEALRMLAHHRPDAMILDLMMPGFDGFEVLAALRQAPEWR 984          
BLAST of mRNA_P-wetherbeei_contig16785.1.1 vs. uniprot
Match: UPI001302FEF8 (PAS domain S-box protein n=1 Tax=Ideonella sp. A 288 TaxID=1962181 RepID=UPI001302FEF8)

HSP 1 Score: 567 bits (1462), Expect = 8.270e-192
Identity = 310/493 (62.88%), Postives = 365/493 (74.04%), Query Frame = 1
Query:   10 SVVRDGVTPQRVLG---IVTDITEQKSADEARLRAQRLESENRQIQEANRLKSQFLANMSHELRTPLNAIIGFADLLHANAVPPESPKHRVFLGHISTSGHHLLQLINDVLDLSKVESGKFEFTPEPVHLPALVKEVSDTLNTAVLRKRIRVNTAVDPTLTDLVLDVARLKQVLFNYLSNAIKFTPVGGHVTVRARAEGATHFRLEVEDDGIGIAAADLPRLFSEFQQLDAGYNKRHQGTGLGLALTRRLVQAQGGSVGVRSTVGHGSVFHAVLNRVHGTDACLAEAALAQPAAGPPANRWLVIEDDPRDQDRLFHALSEAGFDVDVATTGEQALRHASGRTYDAITLDLMLPDQHGLGVLANIRSHGPSRTAPVVGMTMPADSGTVAGFSIADVLSKPIRTEEIVLAMARFRRREPDRAKVMVIDDDPLALDLMRSTLKGLGIETVGLLDGRLALSEIDQHRPDAIILDLMMPGFDGFAVMDGLHRLPQWQA 1479
            S +RD     R++G   I  DIT+Q+ A  ARLRA+RLE+ENRQIQ ANRLKSQFLANMSHELRTPLNAIIGF++LLH+ AVP + PKH  FLGHI TSG HLLQLINDVLDLSKVE+GKF+F PEPV+L  LV EV D L T+ +RK++R  T +D  LTDLV+D AR KQVL+NYLSNAIKFTP GG +T+RAR  G + FRLEV D G+GIA +DL RLF EFQQLDAG++K+HQGTGLGLALTRRLVQAQGG VGVRST G GSVF+  + RV G  A +A              RWLVIEDD   Q  +   L  AGFDVDVA   EQA+  A G+ YDAITLDL LPDQ GLG LA IR  GPSR +PV  +TMP  +   A F+IA++L KP+RT+E+V +MAR    E  R KVMVIDDDPLAL+LM + L+ L I+ +G LD R AL+E++Q  PDA+ILDLMMPGFDGFA +D L RLP  QA
Sbjct:  372 SPIRDATG--RIVGASKIARDITQQRQAAAARLRAERLEAENRQIQAANRLKSQFLANMSHELRTPLNAIIGFSELLHSGAVPVDDPKHTHFLGHIGTSGRHLLQLINDVLDLSKVEAGKFDFHPEPVNLARLVTEVRDVLVTSAMRKQLRWTTDIDEALTDLVIDPARFKQVLYNYLSNAIKFTPQGGRITLRARGLGPSAFRLEVHDTGVGIAESDLARLFVEFQQLDAGHSKQHQGTGLGLALTRRLVQAQGGRVGVRSTPGVGSVFYLDMPRVTGPSAEIAP-------------RWLVIEDDSPLQAEVVQGLQGAGFDVDVAANAEQAVHRAGGQAYDAITLDLQLPDQQGLGALARIRHKGPSRESPVRALTMPTGASRAATFAIANLLGKPLRTDEVVASMARLPTPEGRRLKVMVIDDDPLALELMEAALRELHIDAIGRLDARGALAELEQQPPDALILDLMMPGFDGFATLDALRRLPAGQA 849          
BLAST of mRNA_P-wetherbeei_contig16785.1.1 vs. uniprot
Match: H5WPQ9_9BURK (Histidine kinase n=1 Tax=Burkholderiales bacterium JOSHI_001 TaxID=864051 RepID=H5WPQ9_9BURK)

HSP 1 Score: 556 bits (1433), Expect = 1.300e-187
Identity = 294/477 (61.64%), Postives = 360/477 (75.47%), Query Frame = 1
Query:   52 IVTDITEQKSADEARLRAQRLESENRQIQEANRLKSQFLANMSHELRTPLNAIIGFADLLHANAVPPESPKHRVFLGHISTSGHHLLQLINDVLDLSKVESGKFEFTPEPVHLPALVKEVSDTLNTAVLRKRIRVNTAVDPTLTDLVLDVARLKQVLFNYLSNAIKFTPVGGHVTVRARAEGATHFRLEVEDDGIGIAAADLPRLFSEFQQLDAGYNKRHQGTGLGLALTRRLVQAQGGSVGVRSTVGHGSVFHAVLNRVHGTDACLAEAALAQPAAGPPANRWLVIEDDPRDQDRLFHALSEAGFDVDVATTGEQALRHASGRTYDAITLDLMLPDQHGLGVLANIRSHGPSRTAPVVGMTMPADSGTVAGFSIADVLSKPIRTEEIVLAMARFRRREPDRAKVMVIDDDPLALDLMRSTLKGLGIETVGLLDGRLALSEIDQHRPDAIILDLMMPGFDGFAVMDGLHRLPQWQAT 1482
            IV DIT+++ A++ARL+ +++E+ENRQIQ+ANR KSQFLANMSHELRTPLNAIIGF+DL+ A  V P SPKHR +LGHIS SGHHLLQLIND+LDLSKVESGKFEF PEPV LP L+KE+ D L+  + RK I +   +DP L  +VLD ARLKQVL+NYLSNAIKFTP  G +TVR  A+   H  +EVED GIGIAA  LPRLF EF+Q+DAG NK+HQG GLGLALTRRLV+AQGGSVGVRS  G GSVF A LNR+HGTDA  A+A   +P      +R LVIEDDP  Q RL   L  AG+ V+ A++  QA+R A G  +D +TLDL+L D  GLG+L++IR+ G S  A V+G+T+P      A F++AD+LSKP+R+ ++ LAMA FR       +VMVIDDDP+ALDLM + L  +G+E V L DGR AL EID+H+P AIILDLMMP FDGFAV+D LH+LP+W  T
Sbjct:  368 IVRDITQRRQAEQARLKIEQMEAENRQIQQANRFKSQFLANMSHELRTPLNAIIGFSDLMLAGKVSPGSPKHRSWLGHISASGHHLLQLINDILDLSKVESGKFEFFPEPVDLPRLLKEIGDVLHAGIERKGISIRAELDPQLDAIVLDHARLKQVLYNYLSNAIKFTPNAGCITVRVTADDEEHILVEVEDTGIGIAADQLPRLFMEFEQIDAGRNKQHQGAGLGLALTRRLVEAQGGSVGVRSETGKGSVFFARLNRIHGTDATRAKAG-DRPEPDARTHRLLVIEDDPHLQARLVEGLLGAGYGVEAASSAAQAVRLALGARFDGLTLDLLLADCSGLGLLSDIRNEGNSARARVMGVTVPVHGSGAASFAVADILSKPLRSGDLALAMATFRGPNGATTRVMVIDDDPMALDLMHAALADVGVEAVCLQDGRQALREIDKHQPQAIILDLMMPEFDGFAVLDALHQLPEWWDT 843          
BLAST of mRNA_P-wetherbeei_contig16785.1.1 vs. uniprot
Match: A0A519ZTS0_9BURK (Histidine kinase n=1 Tax=Rubrivivax sp. TaxID=50259 RepID=A0A519ZTS0_9BURK)

HSP 1 Score: 552 bits (1422), Expect = 9.900e-186
Identity = 303/478 (63.39%), Postives = 364/478 (76.15%), Query Frame = 1
Query:   52 IVTDITEQKSADEARLRAQRLESENRQIQEANRLKSQFLANMSHELRTPLNAIIGFADLLHANAVPPESPKHRVFLGHISTSGHHLLQLINDVLDLSKVESGKFEFTPEPVHLPALVKEVSDTLNTAVLRKRIRVNTAVDPTLTDLVLDVARLKQVLFNYLSNAIKFTPVGGHVTVRARAEGATHFRLEVEDDGIGIAAADLPRLFSEFQQLDAGYNKRHQGTGLGLALTRRLVQAQGGSVGVRSTVGHGSVFHAVLNRVHGTDACLAEAALAQPAAGP---PANRWLVIEDDPRDQDRLFHALSEAGFDVDVATTGEQALRHASGRT-YDAITLDLMLPDQHGLGVLANIRSHGPSRTAPVVGMTMPADSGTVAGFSIADVLSKPIRTEEIVLAMARFRRREPDRAKVMVIDDDPLALDLMRSTLKGLGIETVGLLDGRLALSEIDQHRPDAIILDLMMPGFDGFAVMDGLHRLPQW 1473
            I  D+++Q+ A+ A L+A+RLE+ENRQIQEA+R+KS FLANMSHELRTPLNAIIGFADLLH+ AVP +SPKH+ FLGHI+T+G HLLQLINDVLDLSKVESGKFEF PE VHLP L+ EV + L TA+ RK++ +   +DP + +LV+D ARLKQVL+NYLSNAIKFTP GG V VRA  EG    R+EVED+GIGI+  +LPRLF+EFQQLDAGY+K+HQGTGLGLALTRRLVQAQGGSVGVRST G GSVFH VL R+H            +P AGP   PA R LVIE +   +  L  AL+ AGF+VD A+TG +AL  A G+  YDA+TLDL+LPDQ GLGVLA IRS GP+  +PVVG+ M  D G  A F+IADVL+KPIR++E+  AMARF +     A+VMVIDDDP++LDLMR+TL  LGIE     D   AL E++ HRPDAIILDLMMP  DGF V+D L+    W
Sbjct:  387 IARDVSQQRRAEAALLKAERLEAENRQIQEASRVKSLFLANMSHELRTPLNAIIGFADLLHSGAVPHQSPKHQDFLGHIATAGRHLLQLINDVLDLSKVESGKFEFFPEAVHLPGLIGEVQEVLLTAMQRKQLSIEVDIDPAVNELVVDPARLKQVLYNYLSNAIKFTPEGGQVRVRALPEGDALVRIEVEDNGIGISEDNLPRLFTEFQQLDAGYSKQHQGTGLGLALTRRLVQAQGGSVGVRSTPGQGSVFHLVLPRLH------------RPDAGPADTPA-RALVIEPEGLARTGLVAALNAAGFEVDTASTGHEALAQACGQQHYDALTLDLLLPDQRGLGVLAGIRSQGPNHGSPVVGVAMSVDDGAAA-FAIADVLTKPIRSDEVAAAMARFLQDRGRSARVMVIDDDPVSLDLMRATLATLGIEGQCFTDPMRALLELEHHRPDAIILDLMMPVIDGFEVLDALNARADW 850          
BLAST of mRNA_P-wetherbeei_contig16785.1.1 vs. uniprot
Match: UPI001E3038E1 (PAS domain S-box protein n=2 Tax=Ideonella azotifigens TaxID=513160 RepID=UPI001E3038E1)

HSP 1 Score: 550 bits (1416), Expect = 2.920e-183
Identity = 304/496 (61.29%), Postives = 362/496 (72.98%), Query Frame = 1
Query:    4 QGSVVRDGVTPQRVLGIVTDITEQKSADEARLRAQRLESENRQIQEANRLKSQFLANMSHELRTPLNAIIGFADLLHANAVPPESPKHRVFLGHISTSGHHLLQLINDVLDLSKVESGKFEFTPEPVHLPALVKEVSDTLNTAVLRKRIRVNTAVDPTLTDLVLDVARLKQVLFNYLSNAIKFTPVGGHVTVRARAEGATHFRLEVEDDGIGIAAADLPRLFSEFQQLDAGYNKRHQGTGLGLALTRRLVQAQGGSVGVRSTVGHGSVFHAVLNRVHGTDACLAEAALAQPAAG---PPAN-RWLVIEDDPRDQDRLFHALSEAGFDVDVATTGEQALRHASGRTYDAITLDLMLPDQHGLGVLANIRSHGPSRTAPVVGMTMPA-DSGTVAGFSIADVLSKPIRTEEIVLAMARFRRREPDRAKVMVIDDDPLALDLMRSTLKGLGIETVGLLDGRLALSEIDQHRPDAIILDLMMPGFDGFAVMDGLHRLPQWQ 1476
            Q  ++ D  T  R+LGIVTDIT+ K A EAR +A RLE+EN+QIQ A+RLKSQFLANMSHELRTPLNA+IGFADLLH+ AVP +SPK+R FLGHI+ SG HLLQLINDVLDLSKVESGKFEF P+ + L  LV+EV D L   + RK++R+   +DP +  + LD  RLKQVL+NYLSNAIKFT  GG VT+R R EG  HFRLEVED GIGIA ADLPRLF+EFQQLD GYNK+H GTGLGLALTRRLVQAQGG VGVRST+G GSVFH VL RV              PA G   PPA+ R LVIE DPR    L  +L++ GF VD A    +A+  AS + YDAI L L L  + GL VLA IR  GPSR+APV+ ++MPA D+G  A F +AD+L+KP++  E+  A+ R       R ++MV+DDDPLAL LMRS+L  LGI+ V L DGR AL  + QHRPDA+ILDLMMPGFDGF ++D L RLP W+
Sbjct:  501 QAGLLHDSGTAGRMLGIVTDITQHKLAQEARQKAMRLEAENQQIQTASRLKSQFLANMSHELRTPLNAVIGFADLLHSGAVPAQSPKNREFLGHIAASGRHLLQLINDVLDLSKVESGKFEFFPQQLALAPLVREVCDVLQPGMQRKQLRLVLDLDPAVDTVDLDPGRLKQVLYNYLSNAIKFTTEGGQVTIRTRPEGPAHFRLEVEDTGIGIAEADLPRLFAEFQQLDTGYNKQHAGTGLGLALTRRLVQAQGGRVGVRSTLGAGSVFHLVLPRVK-----------PDPADGLMLPPASHRLLVIESDPR----LVRSLADTGFLVDAAANAVEAVTQASQQAYDAILLALRLSGRGGLSVLARIRESGPSRSAPVLALSMPAGDTGETASFPVADLLAKPLQNGELSQALGRLALPVSRRPRLMVVDDDPLALALMRSSLAQLGIDAVCLADGREALESLSQHRPDALILDLMMPGFDGFEMLDALQRLPTWR 981          
BLAST of mRNA_P-wetherbeei_contig16785.1.1 vs. uniprot
Match: UPI0019A59CFD (PAS domain S-box protein n=1 Tax=Microbacteriaceae bacterium TaxID=1873462 RepID=UPI0019A59CFD)

HSP 1 Score: 539 bits (1389), Expect = 1.590e-180
Identity = 293/475 (61.68%), Postives = 348/475 (73.26%), Query Frame = 1
Query:   61 DITEQKSADEARLRAQRLESENRQIQEANRLKSQFLANMSHELRTPLNAIIGFADLLHANAVPPESPKHRVFLGHISTSGHHLLQLINDVLDLSKVESGKFEFTPEPVHLPALVKEVSDTLNTAVLRKRIRVNTAVDPTLTDLVLDVARLKQVLFNYLSNAIKFTPVGGHVTVRARAEGATHFRLEVEDDGIGIAAADLPRLFSEFQQLDAGYNKRHQGTGLGLALTRRLVQAQGGSVGVRSTVGHGSVFHAVLNRV---HGTDACLAEAALAQPAAGPPANRWLVIEDDPRDQDRLFHALSEAGFDVDVATTGEQALRHASGRTYDAITLDLMLPDQHGLGVLANIRSHGPSRTAPVVGMTMPADSGTVAGFSIADVLSKPIRTEEIVLAMARFRRREPDRAKVMVIDDDPLALDLMRSTLKGLGIETVGLLDGRLALSEIDQHRPDAIILDLMMPGFDGFAVMDGLHRLPQWQ 1476
            DIT+Q+ A + RL+A RLE+ENRQI EA RLK+QFLANMSHELRTPLNAIIGFA+LLHA+ VP  SPKHR FL HI +SGHHLL+LIND+LDLSKVESGKF F PEPV L  LV +V + L+   +RK++R+   +DP LTDLVLD AR KQVL+NYLSNAIKFTP  G VT+RARA G   FRLEVED G GIAAADLPRLF EFQQLD  Y+K+HQGTGLGLALT RLVQAQGGSVGVRST G GSVFH  + R                  PAA     R LVI+ DP  Q +L   L  AGFD+D+A +G+QA+  A  R YDAITLDL LPD  GLGVLA+IR+ G SR +PV+ +T+P  +     F+IAD+L KPIR  E+V AMA    +   R +VMV+DDDP+AL++M  TL+G+ I+ V +  G+ AL EIDQHRPDA+ILDLMMPGFDGFA +D L +   WQ
Sbjct:  390 DITDQQLAQQTRLKAARLEAENRQILEATRLKNQFLANMSHELRTPLNAIIGFAELLHADKVPASSPKHRQFLAHIGSSGHHLLRLINDLLDLSKVESGKFVFCPEPVDLGRLVGDVCEVLDALAMRKQLRLVVDIDPALTDLVLDPARFKQVLYNYLSNAIKFTPEQGQVTLRARAAGPRAFRLEVEDTGTGIAAADLPRLFVEFQQLDDSYSKQHQGTGLGLALTHRLVQAQGGSVGVRSTPGVGSVFHLEMPRAPXXXXXXXXXXXXXXLAPAAAGNRRRLLVIQHDPALQAQLQQGLQAAGFDIDLAASGQQAVTQARERAYDAITLDLRLPDLPGLGVLASIRAEGASRQSPVLALTLPVAACQSVSFAIADLLGKPIRIAEVVSAMAALGPQPGRRTRVMVVDDDPIALEMMAVTLQGMAIDVVCVNGGQQALFEIDQHRPDAVILDLMMPGFDGFATLDALRQRVPWQ 864          
BLAST of mRNA_P-wetherbeei_contig16785.1.1 vs. uniprot
Match: UPI001E5BF04C (PAS domain S-box protein n=1 Tax=Aquabacterium sp. CECT 9606 TaxID=2845822 RepID=UPI001E5BF04C)

HSP 1 Score: 533 bits (1374), Expect = 2.070e-178
Identity = 288/475 (60.63%), Postives = 347/475 (73.05%), Query Frame = 1
Query:   52 IVTDITEQKSADEARLRAQRLESENRQIQEANRLKSQFLANMSHELRTPLNAIIGFADLLHANAVPPESPKHRVFLGHISTSGHHLLQLINDVLDLSKVESGKFEFTPEPVHLPALVKEVSDTLNTAVLRKRIRVNTAVDPTLTDLVLDVARLKQVLFNYLSNAIKFTPVGGHVTVRARAEGATHFRLEVEDDGIGIAAADLPRLFSEFQQLDAGYNKRHQGTGLGLALTRRLVQAQGGSVGVRSTVGHGSVFHAVLNRVHGTDACLAEAALAQPAAGPPANRWLVIEDDPRDQDRLFHALSEAGFDVDVATTGEQALRHASGRTYDAITLDLMLPDQHGLGVLANIRSHGPSRTAPVVGMTMPADSGTVAGFSIADVLSKPIRTEEIVLAMARFRRREPDRAKVMVIDDDPLALDLMRSTLKGLGIETVGLLDGRLALSEIDQHRPDAIILDLMMPGFDGFAVMDGLHRLPQWQ 1476
            I  DIT+QK  ++ R+ A++LE+ENRQ+  ANRLKS+FLANMSHELRTPLNAIIGFA LLH  AVPPESPKHR FLGHI TSG HLLQLINDVLDLSKVE+GK EF PE V L  LV EV+  L T+  R+ + +   +D  +  L +D +RLKQVL+NYLSNAIKFT  GG VTVRA  EGA HFR+EVED G+GIAAADL +LF EFQQLD+ Y KRHQGTGLGLALTRRLVQAQGG +GVRST+G GSVFH VL R H +   +   AL+  ++GP   R+LVI+DD  +Q R+  AL   G  VD A TG+QA+  A    YDAITLDL+L D  GL  L+ IRS GPSR APVV ++M   S + A F +ADVLSKP+ T ++ +A+      +   A+VMV+DDD LA DLM +TL  LGI+ +GL DGR AL E+  HRPDA+ILDLMMPG DGF V+D L R  +W+
Sbjct:  387 IARDITQQKRVEQMRVDAEKLEAENRQVHAANRLKSEFLANMSHELRTPLNAIIGFAGLLHGGAVPPESPKHRDFLGHIETSGQHLLQLINDVLDLSKVEAGKLEFFPESVDLALLVSEVTTILQTSASRQGVTLYAEIDERVAQLHIDPSRLKQVLYNYLSNAIKFTRAGGQVTVRAMPEGADHFRIEVEDTGVGIAAADLSKLFIEFQQLDSSYTKRHQGTGLGLALTRRLVQAQGGHIGVRSTLGVGSVFHLVLPRSHASTDAVPSPALS--SSGP---RFLVIKDDHHEQSRMADALLAVGVQVDHAKTGDQAVAQAHSHPYDAITLDLILSDCRGLEALSAIRSKGPSREAPVVAVSMRTASSSAASFPVADVLSKPLETRQLSMALGSLGLTQRVGARVMVVDDDQLARDLMEATLGKLGIDFIGLSDGRQALEEMALHRPDAVILDLMMPGMDGFEVLDALRRQAEWR 856          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16785.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI0019BE50341.590e-22170.78PAS domain S-box protein n=1 Tax=Bacteriovorax sp.... [more]
A0A1H0GUE5_9BURK3.110e-20466.19Histidine kinase n=1 Tax=Rhodoferax sp. OV413 TaxI... [more]
UPI001144C6282.080e-19965.71PAS domain S-box protein n=1 Tax=Ideonella azotifi... [more]
A0A257DDM3_9BURK1.100e-19563.82Histidine kinase n=1 Tax=Burkholderiales bacterium... [more]
UPI001302FEF88.270e-19262.88PAS domain S-box protein n=1 Tax=Ideonella sp. A 2... [more]
H5WPQ9_9BURK1.300e-18761.64Histidine kinase n=1 Tax=Burkholderiales bacterium... [more]
A0A519ZTS0_9BURK9.900e-18663.39Histidine kinase n=1 Tax=Rubrivivax sp. TaxID=5025... [more]
UPI001E3038E12.920e-18361.29PAS domain S-box protein n=2 Tax=Ideonella azotifi... [more]
UPI0019A59CFD1.590e-18061.68PAS domain S-box protein n=1 Tax=Microbacteriaceae... [more]
UPI001E5BF04C2.070e-17860.63PAS domain S-box protein n=1 Tax=Aquabacterium sp.... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16785contigP-wetherbeei_contig16785:5..1486 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog864051.BurJ1DRAFT_3248
PFAMsHATPase_c,HisKA,PAS_4
Model size1482
Max annot lvl28216|Betaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.13e-188
EggNOG OGsCOG5002@1|root,COG5002@2|Bacteria,1R5EN@1224|Proteobacteria,2W90C@28216|Betaproteobacteria,1KNH2@119065|unclassified Burkholderiales
DescriptionMotif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
Cds size1482
COG categoryT
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186097.4805093-CDS-P-wetherbeei_contig16785:4..14861683186097.4805093-CDS-P-wetherbeei_contig16785:4..1486Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16785 5..1486 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16785.1.1prot_P-wetherbeei_contig16785.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig16785 5..1486 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig16785.1.1

>prot_P-wetherbeei_contig16785.1.1 ID=prot_P-wetherbeei_contig16785.1.1|Name=mRNA_P-wetherbeei_contig16785.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=494bp
AQGSVVRDGVTPQRVLGIVTDITEQKSADEARLRAQRLESENRQIQEANR
LKSQFLANMSHELRTPLNAIIGFADLLHANAVPPESPKHRVFLGHISTSG
HHLLQLINDVLDLSKVESGKFEFTPEPVHLPALVKEVSDTLNTAVLRKRI
RVNTAVDPTLTDLVLDVARLKQVLFNYLSNAIKFTPVGGHVTVRARAEGA
THFRLEVEDDGIGIAAADLPRLFSEFQQLDAGYNKRHQGTGLGLALTRRL
VQAQGGSVGVRSTVGHGSVFHAVLNRVHGTDACLAEAALAQPAAGPPANR
WLVIEDDPRDQDRLFHALSEAGFDVDVATTGEQALRHASGRTYDAITLDL
MLPDQHGLGVLANIRSHGPSRTAPVVGMTMPADSGTVAGFSIADVLSKPI
RTEEIVLAMARFRRREPDRAKVMVIDDDPLALDLMRSTLKGLGIETVGLL
DGRLALSEIDQHRPDAIILDLMMPGFDGFAVMDGLHRLPQWQAT
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mRNA from alignment at P-wetherbeei_contig16785:5..1486+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig16785.1.1 ID=mRNA_P-wetherbeei_contig16785.1.1|Name=mRNA_P-wetherbeei_contig16785.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1482bp|location=Sequence derived from alignment at P-wetherbeei_contig16785:5..1486+ (Phaeothamnion wetherbeei SAG_119_79)
GCCCAGGGCAGCGTCGTGCGGGACGGTGTGACGCCGCAGCGCGTGCTCGG CATCGTGACCGACATCACCGAACAGAAGTCGGCCGACGAGGCCCGGCTCA GGGCCCAGCGCCTCGAGAGCGAGAACCGCCAGATACAGGAAGCGAACCGA CTGAAGAGCCAGTTCCTGGCCAACATGTCGCACGAGCTCCGCACGCCGCT CAACGCCATCATCGGCTTTGCCGATTTGCTGCATGCGAACGCCGTGCCGC CGGAGTCGCCCAAGCACCGTGTCTTCCTGGGCCACATCAGCACCAGCGGA CACCACCTGCTGCAATTGATCAACGACGTGCTCGACCTGTCGAAGGTGGA GTCGGGCAAGTTCGAGTTCACGCCCGAGCCGGTGCACCTGCCTGCGCTGG TGAAGGAGGTGAGCGACACCCTCAACACCGCCGTTCTGCGAAAGCGCATC CGGGTCAATACGGCCGTCGACCCGACGCTCACCGATCTCGTGCTGGACGT GGCGCGGCTCAAGCAGGTGCTGTTCAACTACCTGTCGAATGCGATCAAGT TCACGCCGGTGGGGGGCCACGTGACGGTTCGCGCCCGTGCCGAGGGGGCA ACCCACTTCCGGCTCGAGGTCGAAGACGACGGCATCGGCATCGCGGCGGC CGACCTGCCGCGCCTGTTCAGCGAGTTCCAGCAACTCGACGCCGGCTACA ACAAGCGGCACCAGGGCACCGGTCTCGGTCTCGCGCTCACGCGCCGCCTG GTGCAGGCGCAGGGCGGCAGCGTGGGGGTGCGCAGCACGGTGGGGCATGG CAGCGTGTTCCACGCGGTGCTCAACCGTGTGCACGGCACCGATGCGTGCC TTGCCGAAGCGGCGCTCGCCCAGCCGGCCGCCGGGCCGCCTGCCAACCGC TGGCTCGTGATCGAGGACGATCCCCGGGACCAGGACCGCCTGTTCCACGC GCTATCGGAAGCCGGCTTCGACGTGGACGTGGCGACCACCGGCGAGCAGG CGCTGCGGCACGCGAGCGGCCGAACCTACGATGCGATCACCCTGGACCTG ATGCTGCCCGACCAGCATGGCCTCGGGGTGCTCGCGAACATCCGCAGCCA CGGCCCGAGCCGCACTGCGCCCGTGGTGGGCATGACCATGCCCGCCGACT CGGGCACGGTCGCCGGTTTCTCGATCGCCGATGTGCTGTCGAAGCCGATC CGCACCGAGGAGATCGTCCTGGCCATGGCCCGCTTCCGACGACGGGAACC GGACCGCGCCAAGGTGATGGTGATCGATGACGACCCCCTGGCGCTGGACC TGATGCGCTCGACGCTCAAGGGTCTCGGCATCGAGACGGTCGGCCTGCTC GATGGCCGCCTGGCCCTGAGCGAGATCGATCAGCACCGGCCCGACGCCAT CATTCTCGACCTGATGATGCCCGGCTTCGATGGTTTCGCGGTGATGGATG GCTTGCACCGATTGCCGCAGTGGCAAGCCACG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig16785:5..1486+

>mRNA_P-wetherbeei_contig16785.1.1 ID=mRNA_P-wetherbeei_contig16785.1.1|Name=mRNA_P-wetherbeei_contig16785.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1482bp|location=Sequence derived from alignment at P-wetherbeei_contig16785:5..1486+ (Phaeothamnion wetherbeei SAG_119_79)
GCCCAGGGCAGCGTCGTGCGGGACGGTGTGACGCCGCAGCGCGTGCTCGG
CATCGTGACCGACATCACCGAACAGAAGTCGGCCGACGAGGCCCGGCTCA
GGGCCCAGCGCCTCGAGAGCGAGAACCGCCAGATACAGGAAGCGAACCGA
CTGAAGAGCCAGTTCCTGGCCAACATGTCGCACGAGCTCCGCACGCCGCT
CAACGCCATCATCGGCTTTGCCGATTTGCTGCATGCGAACGCCGTGCCGC
CGGAGTCGCCCAAGCACCGTGTCTTCCTGGGCCACATCAGCACCAGCGGA
CACCACCTGCTGCAATTGATCAACGACGTGCTCGACCTGTCGAAGGTGGA
GTCGGGCAAGTTCGAGTTCACGCCCGAGCCGGTGCACCTGCCTGCGCTGG
TGAAGGAGGTGAGCGACACCCTCAACACCGCCGTTCTGCGAAAGCGCATC
CGGGTCAATACGGCCGTCGACCCGACGCTCACCGATCTCGTGCTGGACGT
GGCGCGGCTCAAGCAGGTGCTGTTCAACTACCTGTCGAATGCGATCAAGT
TCACGCCGGTGGGGGGCCACGTGACGGTTCGCGCCCGTGCCGAGGGGGCA
ACCCACTTCCGGCTCGAGGTCGAAGACGACGGCATCGGCATCGCGGCGGC
CGACCTGCCGCGCCTGTTCAGCGAGTTCCAGCAACTCGACGCCGGCTACA
ACAAGCGGCACCAGGGCACCGGTCTCGGTCTCGCGCTCACGCGCCGCCTG
GTGCAGGCGCAGGGCGGCAGCGTGGGGGTGCGCAGCACGGTGGGGCATGG
CAGCGTGTTCCACGCGGTGCTCAACCGTGTGCACGGCACCGATGCGTGCC
TTGCCGAAGCGGCGCTCGCCCAGCCGGCCGCCGGGCCGCCTGCCAACCGC
TGGCTCGTGATCGAGGACGATCCCCGGGACCAGGACCGCCTGTTCCACGC
GCTATCGGAAGCCGGCTTCGACGTGGACGTGGCGACCACCGGCGAGCAGG
CGCTGCGGCACGCGAGCGGCCGAACCTACGATGCGATCACCCTGGACCTG
ATGCTGCCCGACCAGCATGGCCTCGGGGTGCTCGCGAACATCCGCAGCCA
CGGCCCGAGCCGCACTGCGCCCGTGGTGGGCATGACCATGCCCGCCGACT
CGGGCACGGTCGCCGGTTTCTCGATCGCCGATGTGCTGTCGAAGCCGATC
CGCACCGAGGAGATCGTCCTGGCCATGGCCCGCTTCCGACGACGGGAACC
GGACCGCGCCAAGGTGATGGTGATCGATGACGACCCCCTGGCGCTGGACC
TGATGCGCTCGACGCTCAAGGGTCTCGGCATCGAGACGGTCGGCCTGCTC
GATGGCCGCCTGGCCCTGAGCGAGATCGATCAGCACCGGCCCGACGCCAT
CATTCTCGACCTGATGATGCCCGGCTTCGATGGTTTCGCGGTGATGGATG
GCTTGCACCGATTGCCGCAGTGGCAAGCCACG
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