mRNA_P-wetherbeei_contig16781.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig16781.1.1
Unique NamemRNA_P-wetherbeei_contig16781.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig16781.1.1 vs. uniprot
Match: A0A2R7LA59_9CAUL (Alpha-ketoglutarate permease n=1 Tax=Caulobacter sp. HMWF025 TaxID=2056860 RepID=A0A2R7LA59_9CAUL)

HSP 1 Score: 270 bits (690), Expect = 3.700e-85
Identity = 140/273 (51.28%), Postives = 184/273 (67.40%), Query Frame = 1
Query:    1 YVTLIGGQLAAMSLQVLLQQVLTEEQLYAWGWRVPFVIGAALAVVVFWIRRGIEETASFSHTQVDVRKRGQPLALVTEYRRESAIVLALTAAGAVGFYTYAVYMQKLLVNTAGFDKAVAAEIMTWVLATLLFFPPLVGWIADYVGRKRTLLVAFGVSALLAVPMLNALATATDPLMAYLTCLLPLFFLSGYYALSAIVKAELYPVHVRALGVSLPYAVALAIFGGNAETMALYFKTIGMESGYYWLVAAIFAVGFVAACLLPDERRGTRLGDD 819
            YVTLI GQL A  + V+LQ  LT EQL AWGWR+PF IGAALAV+VFWIR G+EE+ SF   + +   +G  LA+  E+ RE+  ++ LTAAG++ FY Y  YM K L NT GF KA A  +    L   +   PL GW++D  GR+R L+ AFG  A+LA P+   +A A DP+MA+L     L   SGY ++SA+VKAELYP HVRALGV+LPYA+  A+FGG AE +AL+FK+IG+ESG+Y  +A + A+G V A  L D  R +R+ +D
Sbjct:  163 YVTLIMGQLVAALVLVILQNTLTAEQLSAWGWRIPFYIGAALAVIVFWIRSGLEESQSFEKARAEGTPKGTTLAMFREHPREALAIIGLTAAGSLAFYAYTTYMLKFLTNTTGFSKATAGAVNLATLVGFMLVQPLFGWLSDQWGRRRMLVFAFGAGAILAWPIFTLVARANDPVMAFLLIFAALIVQSGYTSISAVVKAELYPAHVRALGVALPYALGNAVFGGTAEYVALWFKSIGLESGFYLYLAGMMAMGAVIAFSLRDSARHSRILED 435          
BLAST of mRNA_P-wetherbeei_contig16781.1.1 vs. uniprot
Match: UPI001933587B (MFS transporter n=1 Tax=Steroidobacter gossypii TaxID=2805490 RepID=UPI001933587B)

HSP 1 Score: 264 bits (674), Expect = 1.120e-82
Identity = 136/276 (49.28%), Postives = 188/276 (68.12%), Query Frame = 1
Query:    1 YVTLIGGQLAAMSLQVLLQQVLTEEQLYAWGWRVPFVIGAALAVVVFWIRRGIEETASFSHTQVDVRKRGQPLALVTEYRRESAIVLALTAAGAVGFYTYAVYMQKLLVNTA------GFDKAVAAEIMTWVLATLLFFPPLVGWIADYVGRKRTLLVAFGVSALLAVPMLNALATATDPLMAYLTCLLPLFFLSGYYALSAIVKAELYPVHVRALGVSLPYAVALAIFGGNAETMALYFKTIGMESGYYWLVAAIFAVGFVAACLLPDERRGTRL 810
            Y+TLIGGQL A+ L  LLQ +L+ E L AWGWR+PFV GA LA+VV W+RR ++ETAS+   ++   +RG  + L++ Y RE+A +  ++AAG+  FY Y  YMQK L+N+A      GF K  A++IM +VL   +   P+ GW++D +GR+  L+ AFG+ A  A P+   L TA+ PL A   C +PL  LSGY A+SAI KAEL+P HVR+LGV LPYAVA A F GNAE+ AL+FK  G ESG+Y +++A+ A  FVA+ L+ D +R +R+
Sbjct:  164 YITLIGGQLLALGLLSLLQLLLSPEALQAWGWRIPFVAGALLAIVVLWMRRDMDETASYRAARMGQAERGSAMTLISTYPRETAFIFLVSAAGSCAFYVYTTYMQKFLINSAAGPMGEGFSKDQASQIMLFVLVAFMIMQPISGWLSDAIGRRAMLVGAFGLGAAAAYPIHKLLLTASTPLEAVALCTIPLIILSGYTAVSAIFKAELFPAHVRSLGVGLPYAVASAFFSGNAESGALWFKHRGNESGFYLVLSALLATAFVASALMKDPKRHSRI 439          
BLAST of mRNA_P-wetherbeei_contig16781.1.1 vs. uniprot
Match: A0A2D7ZNR1_9CAUL (Alpha-ketoglutarate permease n=2 Tax=Caulobacterales TaxID=204458 RepID=A0A2D7ZNR1_9CAUL)

HSP 1 Score: 262 bits (669), Expect = 6.850e-82
Identity = 133/273 (48.72%), Postives = 182/273 (66.67%), Query Frame = 1
Query:    1 YVTLIGGQLAAMSLQVLLQQVLTEEQLYAWGWRVPFVIGAALAVVVFWIRRGIEETASFSHTQVDVRKRGQPLALVTEYRRESAIVLALTAAGAVGFYTYAVYMQKLLVNTAGFDKAVAAEIMTWVLATLLFFPPLVGWIADYVGRKRTLLVAFGVSALLAVPMLNALATATDPLMAYLTCLLPLFFLSGYYALSAIVKAELYPVHVRALGVSLPYAVALAIFGGNAETMALYFKTIGMESGYYWLVAAIFAVGFVAACLLPDERRGTRLGDD 819
            +VTLI GQL A+ + +LLQ+++  E L AWGWR+PFV GA LAVVVFWIRRG+EE+ASF + Q    +R + + L T +  E+A +  LTA G++ FY Y  YMQK LVNT GF K  A  I    L   LF  PL GW++D  GR+  L   FG   LL  P++ A+A  T+PLMA+   ++ +  ++GY ++SA+ KAEL+P HVRALGV+LPYA+A A+FGG AE +AL FK  G+ES +Y  V+AI  V  + + LL D R+ +R+ +D
Sbjct:  172 FVTLISGQLLALGILILLQRLMPTEDLEAWGWRIPFVFGALLAVVVFWIRRGLEESASFQNAQASGAERARTMMLFTHHPWETAAIFLLTAGGSLAFYAYTTYMQKFLVNTTGFSKETATNITAGALVVYLFILPLFGWLSDKWGRRTNLAFTFGAGMLLTYPIMTAMAGVTEPLMAFALMVVLIVIIAGYTSVSAVTKAELFPAHVRALGVALPYAMANAVFGGTAEAVALGFKGQGVESAFYIYVSAIMGVALITSLLLRDSRQHSRILED 444          
BLAST of mRNA_P-wetherbeei_contig16781.1.1 vs. uniprot
Match: UPI0012E8EC3C (MFS transporter n=1 Tax=Sphingomonas profundi TaxID=2681549 RepID=UPI0012E8EC3C)

HSP 1 Score: 261 bits (667), Expect = 9.230e-82
Identity = 137/273 (50.18%), Postives = 186/273 (68.13%), Query Frame = 1
Query:    1 YVTLIGGQLAAMSLQVLLQQVLTEEQLYAWGWRVPFVIGAALAVVVFWIRRGIEETASFSHTQVDVRKRGQPLALVTEYRRESAIVLALTAAGAVGFYTYAVYMQKLLVNTAGFDKAVAAEIMTWVLATLLFFPPLVGWIADYVGRKRTLLVAFGVSALLAVPMLNALATATDPLMAYLTCLLPLFFLSGYYALSAIVKAELYPVHVRALGVSLPYAVALAIFGGNAETMALYFKTIGMESGYYWLVAAIFAVGFVAACLLPDERRGTRLGDD 819
            YVTL+GGQL A+++ +LLQ++L +E L AWGWRVPFVIGA LAV+VFWIRRG++E+ SF   +    + G  +AL+ E+ RE   ++ LTA G++GFY +  YMQK LVNTAG+ KA A+E     L   + F PL GW++D VGR+  LLVAFG  AL   P+++ +A       A    L+ L   +GY A+ A+VKAEL+P HVRALGV+LPYAVA A FGG AE +AL+FK+ G+E G+Y     + AV FV A L+ D +R +R+ +D
Sbjct:  158 YVTLVGGQLIALAVLILLQRILPKEALEAWGWRVPFVIGAMLAVIVFWIRRGLDESPSFVKAEAAGARGGTTMALLREHPREVMTIVGLTAGGSLGFYIFTTYMQKFLVNTAGYGKAEASEASAVSLIAFMLFQPLAGWLSDLVGRRAMLLVAFGGGALALWPVMSGIAEGGGIGTALALILVSLALQAGYTAIGAVVKAELFPTHVRALGVALPYAVANAAFGGTAEYVALWFKSEGIERGFYVYAIVLMAVSFVTALLMCDTKRHSRITED 430          
BLAST of mRNA_P-wetherbeei_contig16781.1.1 vs. uniprot
Match: A0A2D2B1M0_9CAUL (Alpha-ketoglutarate permease n=1 Tax=Caulobacter mirabilis TaxID=69666 RepID=A0A2D2B1M0_9CAUL)

HSP 1 Score: 261 bits (668), Expect = 9.680e-82
Identity = 133/273 (48.72%), Postives = 182/273 (66.67%), Query Frame = 1
Query:    1 YVTLIGGQLAAMSLQVLLQQVLTEEQLYAWGWRVPFVIGAALAVVVFWIRRGIEETASFSHTQVDVRKRGQPLALVTEYRRESAIVLALTAAGAVGFYTYAVYMQKLLVNTAGFDKAVAAEIMTWVLATLLFFPPLVGWIADYVGRKRTLLVAFGVSALLAVPMLNALATATDPLMAYLTCLLPLFFLSGYYALSAIVKAELYPVHVRALGVSLPYAVALAIFGGNAETMALYFKTIGMESGYYWLVAAIFAVGFVAACLLPDERRGTRLGDD 819
            YVTLI G L+A  L V+LQ V+ E  L AWGWR+PF IGAALAV+VFWIRRGI E+  F + +     RG+ + L  ++ R++ +V+ LTA G++ +Y Y  YMQK L+NT GF K  A+++M   L   +   PL GWI+D VGRK  LL A+G   +   P++NA+A AT    A+   ++ L F SGY A+S + KAE++P HVRALGV+LPYA+A A+FGG+AE +AL+FK  G+ES +Y    AI AVG V   LLPD R+ + + +D
Sbjct:  172 YVTLIAGSLSAQGLVVILQGVMPEADLKAWGWRIPFFIGAALAVIVFWIRRGIHESQGFENAKASGEARGKTMLLFLKHPRQTLMVMGLTAGGSLAYYVYTSYMQKFLINTTGFSKETASQVMVACLFVFMLMQPLFGWISDKVGRKPLLLFAYGGGMIATWPLMNAIAGATSAWAAFGLIMIALTFQSGYSAISGLFKAEMFPAHVRALGVALPYAIANAVFGGSAEAVALHFKQEGVESHFYLYTTAILAVGLVTVILLPDTRKHSLIHED 444          
BLAST of mRNA_P-wetherbeei_contig16781.1.1 vs. uniprot
Match: A0A0P0P447_9CAUL (MFS domain-containing protein n=5 Tax=Caulobacter TaxID=75 RepID=A0A0P0P447_9CAUL)

HSP 1 Score: 256 bits (654), Expect = 7.000e-80
Identity = 133/273 (48.72%), Postives = 183/273 (67.03%), Query Frame = 1
Query:    1 YVTLIGGQLAAMSLQVLLQQVLTEEQLYAWGWRVPFVIGAALAVVVFWIRRGIEETASFSHTQVDVRKRGQPLALVTEYRRESAIVLALTAAGAVGFYTYAVYMQKLLVNTAGFDKAVAAEIMTWVLATLLFFPPLVGWIADYVGRKRTLLVAFGVSALLAVPMLNALATATDPLMAYLTCLLPLFFLSGYYALSAIVKAELYPVHVRALGVSLPYAVALAIFGGNAETMALYFKTIGMESGYYWLVAAIFAVGFVAACLLPDERRGTRLGDD 819
            YVTLI GQL A  + V+LQ VL   +L AWGWR+PF IGAALAVVVFWIR G+EE+ S+++ +     +   LA+ T++ RE+  ++ LTAAG++ FY Y  YM K L NT GF K VA  +    L   +   PL GW++D +GR+R L+ AFG  A+LA P+   LA ATDP +A++     L   S Y ++SA+VKAEL+P HVRALGV+LPYA+  A+FGG AE +AL+FK+IG+ESG+Y  +  + A+G V A  L D  + +R+ +D
Sbjct:  152 YVTLIMGQLVAALVLVILQNVLEPAELSAWGWRIPFFIGAALAVVVFWIRSGLEESQSYTNAKAAGAPKANTLAMFTQHPREALAIIGLTAAGSLAFYAYTTYMLKFLTNTTGFSKEVAGAVNLATLVGFMLIQPLFGWLSDRLGRRRMLVFAFGGGAVLAWPVFTLLAGATDPTVAFVLIFAALVVQSAYTSISAVVKAELFPTHVRALGVALPYAIGNALFGGTAEFVALWFKSIGLESGFYVYLTGMMAMGAVIALALRDSGKHSRILED 424          
BLAST of mRNA_P-wetherbeei_contig16781.1.1 vs. uniprot
Match: UPI001BAFA87F (MFS transporter n=2 Tax=Sphingobium phenoxybenzoativorans TaxID=1592790 RepID=UPI001BAFA87F)

HSP 1 Score: 256 bits (654), Expect = 9.800e-80
Identity = 131/264 (49.62%), Postives = 183/264 (69.32%), Query Frame = 1
Query:    4 VTLIGGQLAAMSLQVLLQQVLTEEQLYAWGWRVPFVIGAALAVVVFWIRRGIEETASFSHTQVDVRKRGQPLALVTEYRRESAIVLALTAAGAVGFYTYAVYMQKLLVNTAGFDKAVAAEIMTWVLATLLFFPPLVGWIADYVGRKRTLLVAFGVSALLAVPMLNALATATDPLMAYLTCLLPLFFLSGYYALSAIVKAELYPVHVRALGVSLPYAVALAIFGGNAETMALYFKTIGMESGYYWLVAAIFAVGFVAACLLPDER 795
            VTL+ GQL+A+ L +LLQ +L+ E L +WGWR+ F++GAALAVVVFWIRRG++E+ SF   + D  +      L+TE+R+ + +V ALTAAG+ GFY +  YMQK LVNT+GF    A  IM   L   L   PL G ++D +GR+R+L+++FG +AL  VP++ AL+TA  P  A+   L+PL   SGY A+ A+VKAELYP H+RALGV LPYA+A A+FGG  E +AL+FK +G E  +++ +AA+   G + A LLP+ R
Sbjct:  166 VTLVLGQLSALCLLMLLQSLLSPEALASWGWRLAFLLGAALAVVVFWIRRGLDESHSFRAAEPDKVQNRAARHLLTEHRKATILVFALTAAGSTGFYVFIGYMQKFLVNTSGFTAPQATAIMAVALVIFLLAQPLFGLLSDIIGRRRSLIMSFGATALCTVPVMQALSTARHPAEAFALILVPLLLFSGYTAIGAVVKAELYPAHIRALGVGLPYALANAMFGGTGEFLALWFKRVGREDMFFYYLAAVMLAGLIVALLLPETR 429          
BLAST of mRNA_P-wetherbeei_contig16781.1.1 vs. uniprot
Match: A0A2G4JQM2_9CAUL (Alpha-ketoglutarate permease n=1 Tax=Caulobacter sp. B11 TaxID=2048899 RepID=A0A2G4JQM2_9CAUL)

HSP 1 Score: 256 bits (654), Expect = 1.130e-79
Identity = 133/273 (48.72%), Postives = 184/273 (67.40%), Query Frame = 1
Query:    1 YVTLIGGQLAAMSLQVLLQQVLTEEQLYAWGWRVPFVIGAALAVVVFWIRRGIEETASFSHTQVDVRKRGQPLALVTEYRRESAIVLALTAAGAVGFYTYAVYMQKLLVNTAGFDKAVAAEIMTWVLATLLFFPPLVGWIADYVGRKRTLLVAFGVSALLAVPMLNALATATDPLMAYLTCLLPLFFLSGYYALSAIVKAELYPVHVRALGVSLPYAVALAIFGGNAETMALYFKTIGMESGYYWLVAAIFAVGFVAACLLPDERRGTRLGDD 819
            YVTLI GQL A  + V+LQ  LT  +L AWGWRVPF IGAALAV+VFWIR G+ E+ASF+  +     R + L++  ++ RE+  ++ LTAAG++ FY Y  YM K L NT GF K +A  +    L   +   PL GW++D VGR+R L++AFG  A+LA P+ + +A ATDP++A+L     L   S Y ++SA+VKAEL+PVHVRALGV+LPYA+  A+FGG AE +AL+FK  GMESG+Y  ++ + A+G + A  L D R  + + +D
Sbjct:  169 YVTLIMGQLVAALVLVILQATLTPAELSAWGWRVPFFIGAALAVIVFWIRAGLHESASFTAAKAAGAPRAETLSMFRDHPREALAIIGLTAAGSLAFYAYTTYMLKFLTNTTGFSKPMAGAVNLATLVGFMLIQPLFGWMSDKVGRRRMLIIAFGGGAILAWPIFSLVAKATDPVVAFLLIFAALVVQSAYTSISAVVKAELFPVHVRALGVALPYAIGNALFGGTAEYVALWFKNEGMESGFYLYLSGMMAIGCLIAWRLRDSRDHSLILED 441          
BLAST of mRNA_P-wetherbeei_contig16781.1.1 vs. uniprot
Match: A0A328AXE8_9CAUL (Alpha-ketoglutarate permease n=1 Tax=Phenylobacterium hankyongense TaxID=1813876 RepID=A0A328AXE8_9CAUL)

HSP 1 Score: 253 bits (647), Expect = 7.880e-79
Identity = 132/273 (48.35%), Postives = 184/273 (67.40%), Query Frame = 1
Query:    1 YVTLIGGQLAAMSLQVLLQQVLTEEQLYAWGWRVPFVIGAALAVVVFWIRRGIEETASFSHTQVDVRKRGQPLALVTEYRRESAIVLALTAAGAVGFYTYAVYMQKLLVNTAGFDKAVAAEIMTWVLATLLFFPPLVGWIADYVGRKRTLLVAFGVSALLAVPMLNALATATDPLMAYLTCLLPLFFLSGYYALSAIVKAELYPVHVRALGVSLPYAVALAIFGGNAETMALYFKTIGMESGYYWLVAAIFAVGFVAACLLPDERRGTRLGDD 819
            YVTLIGGQL A+ + V++Q +L++  L AWGWR+PF IG  LA+VVFWIR G++ET ++ +   +  +RGQ ++L+ E+ RE+A +L LTAAG++ FY Y  YMQK LVNT+GFDK  A  IM  VL   +   PLVGW +D+VGRK T+ V  G  AL   P+++A+A A    +A+   LL +   SGY A++A VKAEL+P HVRALGV+LPYA+A A+FGG AE +A + K + +ESG+Y  VA +  V  V A  L +    + + +D
Sbjct:  152 YVTLIGGQLTALLVLVVVQHLLSKAALEAWGWRIPFAIGGLLAIVVFWIRTGLDETRAYLNAAKETPRRGQTMSLLREHPRETAAILTLTAAGSLSFYAYTTYMQKFLVNTSGFDKDTATAIMAGVLVAYMLIQPLVGWASDHVGRKTTMAVGLGAGALATYPVMSAIAGAHSAGLAFGLILLLVACHSGYSAVNAAVKAELFPAHVRALGVALPYAIANAVFGGTAEYVAGWLKKLHVESGFYLYVAVVMTVAAVVAVRLRNTNVTSLIAED 424          
BLAST of mRNA_P-wetherbeei_contig16781.1.1 vs. uniprot
Match: A0A558QWH5_9SPHN (MFS transporter n=1 Tax=Sphingomonas solaris TaxID=2529389 RepID=A0A558QWH5_9SPHN)

HSP 1 Score: 253 bits (646), Expect = 1.430e-78
Identity = 131/273 (47.99%), Postives = 180/273 (65.93%), Query Frame = 1
Query:    1 YVTLIGGQLAAMSLQVLLQQVLTEEQLYAWGWRVPFVIGAALAVVVFWIRRGIEETASFSHTQVDVRKRGQPLALVTEYRRESAIVLALTAAGAVGFYTYAVYMQKLLVNTAGFDKAVAAEIMTWVLATLLFFPPLVGWIADYVGRKRTLLVAFGVSALLAVPMLNALATATDPLMAYLTCLLPLFFLSGYYALSAIVKAELYPVHVRALGVSLPYAVALAIFGGNAETMALYFKTIGMESGYYWLVAAIFAVGFVAACLLPDERRGTRLGDD 819
            +VTL+GGQL A+ L +LLQ  L+ E L +WGWRVPFVIGA LAV VFWIRRG++E+ASF+       + G  + L+  + R  A ++ LTA G++ FY Y  YMQK LVNTAG+ K  A+EI    L   + F P+ GW++D VGR+  L+ +FG  AL+  P++  +A    PL+A    L  L   +GY A+ A++KAEL+P HVRALGV+LPYAVA A FGG AE +AL+FK+ G+E G+Y     +  V FV A L+ D +R +R+ +D
Sbjct:  161 FVTLVGGQLLALGLLILLQHTLSAEALASWGWRVPFVIGALLAVAVFWIRRGLDESASFTTADRKGVRAGTAMTLLRHHPRAVATIVGLTAGGSLSFYIYTSYMQKFLVNTAGYSKTTASEISAAALVAFMLFQPVAGWLSDKVGRRAMLIGSFGGGALILWPVMAGVARGAAPLVALTLILGALALQAGYTAIGAVLKAELFPTHVRALGVALPYAVANAAFGGTAEYVALWFKSEGIERGFYVYAVTLMTVSFVTALLMRDTKRHSRIAED 433          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16781.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2R7LA59_9CAUL3.700e-8551.28Alpha-ketoglutarate permease n=1 Tax=Caulobacter s... [more]
UPI001933587B1.120e-8249.28MFS transporter n=1 Tax=Steroidobacter gossypii Ta... [more]
A0A2D7ZNR1_9CAUL6.850e-8248.72Alpha-ketoglutarate permease n=2 Tax=Caulobacteral... [more]
UPI0012E8EC3C9.230e-8250.18MFS transporter n=1 Tax=Sphingomonas profundi TaxI... [more]
A0A2D2B1M0_9CAUL9.680e-8248.72Alpha-ketoglutarate permease n=1 Tax=Caulobacter m... [more]
A0A0P0P447_9CAUL7.000e-8048.72MFS domain-containing protein n=5 Tax=Caulobacter ... [more]
UPI001BAFA87F9.800e-8049.62MFS transporter n=2 Tax=Sphingobium phenoxybenzoat... [more]
A0A2G4JQM2_9CAUL1.130e-7948.72Alpha-ketoglutarate permease n=1 Tax=Caulobacter s... [more]
A0A328AXE8_9CAUL7.880e-7948.35Alpha-ketoglutarate permease n=1 Tax=Phenylobacter... [more]
A0A558QWH5_9SPHN1.430e-7847.99MFS transporter n=1 Tax=Sphingomonas solaris TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16781contigP-wetherbeei_contig16781:2..823 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1550073.JROH01000022_gene222
PFAMsSugar_tr
Model size822
Max annot lvl204457|Sphingomonadales
KEGG koko:K03761
KEGG TC2.A.1.6.2
Hectar predicted targeting categorysignal peptide
Exons1
Evalue4.07e-77
EggNOG OGsCOG0477@1|root,COG0477@2|Bacteria,1MVZG@1224|Proteobacteria,2TRS1@28211|Alphaproteobacteria,2K1Z1@204457|Sphingomonadales
DescriptionTransporter
Cds size822
COG categoryEGP
BRITEko00000,ko02000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186097.362107-CDS-P-wetherbeei_contig16781:1..8231683186097.362107-CDS-P-wetherbeei_contig16781:1..823Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16781 2..823 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16781.1.1prot_P-wetherbeei_contig16781.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig16781 2..823 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig16781.1.1

>prot_P-wetherbeei_contig16781.1.1 ID=prot_P-wetherbeei_contig16781.1.1|Name=mRNA_P-wetherbeei_contig16781.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=274bp
YVTLIGGQLAAMSLQVLLQQVLTEEQLYAWGWRVPFVIGAALAVVVFWIR
RGIEETASFSHTQVDVRKRGQPLALVTEYRRESAIVLALTAAGAVGFYTY
AVYMQKLLVNTAGFDKAVAAEIMTWVLATLLFFPPLVGWIADYVGRKRTL
LVAFGVSALLAVPMLNALATATDPLMAYLTCLLPLFFLSGYYALSAIVKA
ELYPVHVRALGVSLPYAVALAIFGGNAETMALYFKTIGMESGYYWLVAAI
FAVGFVAACLLPDERRGTRLGDD*
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mRNA from alignment at P-wetherbeei_contig16781:2..823+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig16781.1.1 ID=mRNA_P-wetherbeei_contig16781.1.1|Name=mRNA_P-wetherbeei_contig16781.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=822bp|location=Sequence derived from alignment at P-wetherbeei_contig16781:2..823+ (Phaeothamnion wetherbeei SAG_119_79)
TACGTGACCTTGATCGGCGGACAACTCGCGGCCATGAGTCTGCAAGTCCT CCTGCAACAGGTGCTGACGGAAGAACAACTCTATGCCTGGGGCTGGCGTG TGCCTTTCGTGATCGGCGCAGCGCTCGCGGTGGTGGTGTTCTGGATACGG CGCGGCATTGAGGAGACCGCGTCGTTCAGCCACACCCAGGTAGACGTGCG AAAACGGGGTCAGCCACTCGCGCTGGTGACGGAGTATCGCAGGGAGAGCG CGATCGTGCTGGCCCTGACGGCGGCAGGCGCCGTCGGCTTTTATACTTAC GCGGTCTATATGCAGAAGTTGCTGGTCAATACCGCCGGCTTCGATAAGGC CGTGGCGGCCGAGATCATGACCTGGGTGCTAGCGACCTTGTTGTTCTTCC CGCCGCTGGTCGGCTGGATTGCTGATTATGTCGGCCGCAAACGCACCCTG CTGGTGGCCTTTGGTGTCAGCGCCTTGTTGGCAGTGCCGATGCTGAATGC GCTCGCCACCGCCACCGATCCGCTGATGGCCTATTTGACCTGTTTGCTGC CGCTGTTCTTTCTGTCGGGCTATTACGCGCTCAGCGCCATCGTCAAGGCC GAGCTGTATCCGGTGCATGTGCGCGCACTGGGCGTGTCCTTGCCCTATGC CGTGGCGCTCGCGATCTTTGGCGGCAATGCCGAGACCATGGCCCTGTACT TCAAGACCATAGGCATGGAGTCTGGGTACTACTGGCTGGTGGCCGCTATT TTTGCCGTCGGCTTCGTCGCCGCCTGCCTGTTGCCGGATGAGCGACGTGG CACGCGACTTGGCGACGACTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig16781:2..823+

>mRNA_P-wetherbeei_contig16781.1.1 ID=mRNA_P-wetherbeei_contig16781.1.1|Name=mRNA_P-wetherbeei_contig16781.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=822bp|location=Sequence derived from alignment at P-wetherbeei_contig16781:2..823+ (Phaeothamnion wetherbeei SAG_119_79)
TACGTGACCTTGATCGGCGGACAACTCGCGGCCATGAGTCTGCAAGTCCT
CCTGCAACAGGTGCTGACGGAAGAACAACTCTATGCCTGGGGCTGGCGTG
TGCCTTTCGTGATCGGCGCAGCGCTCGCGGTGGTGGTGTTCTGGATACGG
CGCGGCATTGAGGAGACCGCGTCGTTCAGCCACACCCAGGTAGACGTGCG
AAAACGGGGTCAGCCACTCGCGCTGGTGACGGAGTATCGCAGGGAGAGCG
CGATCGTGCTGGCCCTGACGGCGGCAGGCGCCGTCGGCTTTTATACTTAC
GCGGTCTATATGCAGAAGTTGCTGGTCAATACCGCCGGCTTCGATAAGGC
CGTGGCGGCCGAGATCATGACCTGGGTGCTAGCGACCTTGTTGTTCTTCC
CGCCGCTGGTCGGCTGGATTGCTGATTATGTCGGCCGCAAACGCACCCTG
CTGGTGGCCTTTGGTGTCAGCGCCTTGTTGGCAGTGCCGATGCTGAATGC
GCTCGCCACCGCCACCGATCCGCTGATGGCCTATTTGACCTGTTTGCTGC
CGCTGTTCTTTCTGTCGGGCTATTACGCGCTCAGCGCCATCGTCAAGGCC
GAGCTGTATCCGGTGCATGTGCGCGCACTGGGCGTGTCCTTGCCCTATGC
CGTGGCGCTCGCGATCTTTGGCGGCAATGCCGAGACCATGGCCCTGTACT
TCAAGACCATAGGCATGGAGTCTGGGTACTACTGGCTGGTGGCCGCTATT
TTTGCCGTCGGCTTCGTCGCCGCCTGCCTGTTGCCGGATGAGCGACGTGG
CACGCGACTTGGCGACGACTGA
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