mRNA_P-wetherbeei_contig16774.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig16774.1.1
Unique NamemRNA_P-wetherbeei_contig16774.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig16774.1.1 vs. uniprot
Match: A0A1F4BPH4_9PROT (Acyl carrier protein n=2 Tax=Betaproteobacteria TaxID=28216 RepID=A0A1F4BPH4_9PROT)

HSP 1 Score: 137 bits (346), Expect = 5.480e-41
Identity = 74/78 (94.87%), Postives = 75/78 (96.15%), Query Frame = 1 
Query:    1 MENIEQRVKKIVAEQLGVNEADVKNESSFVNDLGADSLDTVELVMALEEEFECEIPDEDAEKITTVQQAIDYVKAHLK 234
            MENIEQRVKKIVAEQLGVNEADVKNESSFVNDLGADSLDTVELVMALEEEFE EIPDEDAEKI TVQQAIDY+KAH K
Sbjct:    1 MENIEQRVKKIVAEQLGVNEADVKNESSFVNDLGADSLDTVELVMALEEEFETEIPDEDAEKIATVQQAIDYIKAHAK 78
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BLAST of mRNA_P-wetherbeei_contig16774.1.1 vs. uniprot
Match: A0A679HV06_9RHOO (Acyl carrier protein n=2 Tax=Betaproteobacteria TaxID=28216 RepID=A0A679HV06_9RHOO)

HSP 1 Score: 137 bits (345), Expect = 7.570e-41
Identity = 73/78 (93.59%), Postives = 76/78 (97.44%), Query Frame = 1 
Query:    1 MENIEQRVKKIVAEQLGVNEADVKNESSFVNDLGADSLDTVELVMALEEEFECEIPDEDAEKITTVQQAIDYVKAHLK 234
            M+NIEQRVKKIVAEQLGVNEADVKNESSFV+DLGADSLDTVELVMALEEEFECEIPDEDAEKITTVQQAIDYV +H K
Sbjct:    1 MDNIEQRVKKIVAEQLGVNEADVKNESSFVDDLGADSLDTVELVMALEEEFECEIPDEDAEKITTVQQAIDYVNSHQK 78
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BLAST of mRNA_P-wetherbeei_contig16774.1.1 vs. uniprot
Match: A0A329BA14_9NEIS (Acyl carrier protein n=2 Tax=Microvirgula TaxID=57479 RepID=A0A329BA14_9NEIS)

HSP 1 Score: 137 bits (345), Expect = 7.790e-41
Identity = 73/77 (94.81%), Postives = 76/77 (98.70%), Query Frame = 1 
Query:    1 MENIEQRVKKIVAEQLGVNEADVKNESSFVNDLGADSLDTVELVMALEEEFECEIPDEDAEKITTVQQAIDYVKAHL 231
            MENIEQRVKKIVAEQLGVNEA+VKN+SSFV+DLGADSLDTVELVMALEEEFECEIPDEDAEKITTVQQAIDYV AHL
Sbjct:    1 MENIEQRVKKIVAEQLGVNEAEVKNDSSFVDDLGADSLDTVELVMALEEEFECEIPDEDAEKITTVQQAIDYVSAHL 77
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BLAST of mRNA_P-wetherbeei_contig16774.1.1 vs. uniprot
Match: ACP_LARHH (Acyl carrier protein n=104 Tax=Proteobacteria TaxID=1224 RepID=ACP_LARHH)

HSP 1 Score: 136 bits (343), Expect = 1.570e-40
Identity = 73/77 (94.81%), Postives = 76/77 (98.70%), Query Frame = 1 
Query:    1 MENIEQRVKKIVAEQLGVNEADVKNESSFVNDLGADSLDTVELVMALEEEFECEIPDEDAEKITTVQQAIDYVKAHL 231
            MENIEQRVKKIVAEQLGVNEA+VKNESSFV+DLGADSLDTVELVMALEEEFECEIPDE+AEKITTVQQAIDYV AHL
Sbjct:    1 MENIEQRVKKIVAEQLGVNEAEVKNESSFVDDLGADSLDTVELVMALEEEFECEIPDEEAEKITTVQQAIDYVTAHL 77
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BLAST of mRNA_P-wetherbeei_contig16774.1.1 vs. uniprot
Match: W0SFF3_9PROT (Acyl carrier protein n=8 Tax=Betaproteobacteria TaxID=28216 RepID=W0SFF3_9PROT)

HSP 1 Score: 136 bits (343), Expect = 1.570e-40
Identity = 71/78 (91.03%), Postives = 77/78 (98.72%), Query Frame = 1 
Query:    1 MENIEQRVKKIVAEQLGVNEADVKNESSFVNDLGADSLDTVELVMALEEEFECEIPDEDAEKITTVQQAIDYVKAHLK 234
            MENIEQRVKKIVAEQLGVNEAD+KNES+FV+DLGADSLDTVELVMALEEEFECEIPDEDAEKITTVQQA+DYV A++K
Sbjct:    1 MENIEQRVKKIVAEQLGVNEADIKNESNFVDDLGADSLDTVELVMALEEEFECEIPDEDAEKITTVQQAVDYVNANIK 78
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BLAST of mRNA_P-wetherbeei_contig16774.1.1 vs. uniprot
Match: A0A011QP58_9PROT (Acyl carrier protein n=9 Tax=Betaproteobacteria TaxID=28216 RepID=A0A011QP58_9PROT)

HSP 1 Score: 135 bits (341), Expect = 3.090e-40
Identity = 72/78 (92.31%), Postives = 76/78 (97.44%), Query Frame = 1 
Query:    1 MENIEQRVKKIVAEQLGVNEADVKNESSFVNDLGADSLDTVELVMALEEEFECEIPDEDAEKITTVQQAIDYVKAHLK 234
            MENIEQRVKKIVAEQLGVNEAD+KNESSFV+DLGADSLDTVELVMALEEEFECEIPD++AEKITTVQQAIDYV AH K
Sbjct:    1 MENIEQRVKKIVAEQLGVNEADIKNESSFVDDLGADSLDTVELVMALEEEFECEIPDDEAEKITTVQQAIDYVVAHKK 78
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BLAST of mRNA_P-wetherbeei_contig16774.1.1 vs. uniprot
Match: C7RTM8_ACCPU (Acyl carrier protein n=4 Tax=Proteobacteria TaxID=1224 RepID=C7RTM8_ACCPU)

HSP 1 Score: 135 bits (341), Expect = 3.090e-40
Identity = 72/78 (92.31%), Postives = 76/78 (97.44%), Query Frame = 1 
Query:    1 MENIEQRVKKIVAEQLGVNEADVKNESSFVNDLGADSLDTVELVMALEEEFECEIPDEDAEKITTVQQAIDYVKAHLK 234
            MENIEQRVKKIVAEQLGVNEAD+KNESSFV+DLGADSLDTVELVMALEEEFECEIPD++AEKITTVQQAIDYV AH K
Sbjct:    1 MENIEQRVKKIVAEQLGVNEADIKNESSFVDDLGADSLDTVELVMALEEEFECEIPDDEAEKITTVQQAIDYVLAHKK 78
[Close]
BLAST of mRNA_P-wetherbeei_contig16774.1.1 vs. uniprot
Match: A0A272ESR1_9RHOO (Acyl carrier protein n=12 Tax=Betaproteobacteria TaxID=28216 RepID=A0A272ESR1_9RHOO)

HSP 1 Score: 135 bits (341), Expect = 3.180e-40
Identity = 71/78 (91.03%), Postives = 76/78 (97.44%), Query Frame = 1 
Query:    1 MENIEQRVKKIVAEQLGVNEADVKNESSFVNDLGADSLDTVELVMALEEEFECEIPDEDAEKITTVQQAIDYVKAHLK 234
            MENIEQRV+KIVAEQLG NEAD+KNESSFV+DLGADSLDTVELVMALEEEFECEIPDE+AEKIT+VQQAIDYV AHLK
Sbjct:    1 MENIEQRVRKIVAEQLGANEADIKNESSFVDDLGADSLDTVELVMALEEEFECEIPDEEAEKITSVQQAIDYVSAHLK 78
[Close]
BLAST of mRNA_P-wetherbeei_contig16774.1.1 vs. uniprot
Match: A0A536XG82_9PROT (Acyl carrier protein n=22 Tax=Proteobacteria TaxID=1224 RepID=A0A536XG82_9PROT)

HSP 1 Score: 135 bits (340), Expect = 4.510e-40
Identity = 71/78 (91.03%), Postives = 76/78 (97.44%), Query Frame = 1 
Query:    1 MENIEQRVKKIVAEQLGVNEADVKNESSFVNDLGADSLDTVELVMALEEEFECEIPDEDAEKITTVQQAIDYVKAHLK 234
            MEN+EQRVKKIVAEQLGVNEA++KNESSFV+DLGADSLDTVELVMALEEEFE EIPDEDAEKITTVQQA+DYV AHLK
Sbjct:    1 MENVEQRVKKIVAEQLGVNEAEIKNESSFVDDLGADSLDTVELVMALEEEFETEIPDEDAEKITTVQQAVDYVSAHLK 78
[Close]
BLAST of mRNA_P-wetherbeei_contig16774.1.1 vs. uniprot
Match: A0A1D9BCI2_9NEIS (Acyl carrier protein n=1 Tax=Jeongeupia sp. USM3 TaxID=1906741 RepID=A0A1D9BCI2_9NEIS)

HSP 1 Score: 134 bits (338), Expect = 9.120e-40
Identity = 73/77 (94.81%), Postives = 74/77 (96.10%), Query Frame = 1 
Query:    1 MENIEQRVKKIVAEQLGVNEADVKNESSFVNDLGADSLDTVELVMALEEEFECEIPDEDAEKITTVQQAIDYVKAHL 231
            MENIEQRVKKIVAEQLGV E DVKNESSFVNDLGADSLDTVELVMALEEEFECEIPDEDAEKITTVQQAIDYV A+L
Sbjct:    1 MENIEQRVKKIVAEQLGVPETDVKNESSFVNDLGADSLDTVELVMALEEEFECEIPDEDAEKITTVQQAIDYVSANL 77
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16774.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1F4BPH4_9PROT5.480e-4194.87Acyl carrier protein n=2 Tax=Betaproteobacteria Ta... [more]
A0A679HV06_9RHOO7.570e-4193.59Acyl carrier protein n=2 Tax=Betaproteobacteria Ta... [more]
A0A329BA14_9NEIS7.790e-4194.81Acyl carrier protein n=2 Tax=Microvirgula TaxID=57... [more]
ACP_LARHH1.570e-4094.81Acyl carrier protein n=104 Tax=Proteobacteria TaxI... [more]
W0SFF3_9PROT1.570e-4091.03Acyl carrier protein n=8 Tax=Betaproteobacteria Ta... [more]
A0A011QP58_9PROT3.090e-4092.31Acyl carrier protein n=9 Tax=Betaproteobacteria Ta... [more]
C7RTM8_ACCPU3.090e-4092.31Acyl carrier protein n=4 Tax=Proteobacteria TaxID=... [more]
A0A272ESR1_9RHOO3.180e-4091.03Acyl carrier protein n=12 Tax=Betaproteobacteria T... [more]
A0A536XG82_9PROT4.510e-4091.03Acyl carrier protein n=22 Tax=Proteobacteria TaxID... [more]
A0A1D9BCI2_9NEIS9.120e-4094.81Acyl carrier protein n=1 Tax=Jeongeupia sp. USM3 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16774contigP-wetherbeei_contig16774:178..414 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog62928.azo1626
Preferred nameacpP
PFAMsPP-binding
Model size237
Max annot lvl206389|Rhodocyclales
KEGG koko:K02078
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.28e-41
EggNOG OGsCOG0236@1|root,COG0236@2|Bacteria,1MZ4P@1224|Proteobacteria,2VTZH@28216|Betaproteobacteria,2KWX1@206389|Rhodocyclales
DescriptionCarrier of the growing fatty acid chain in fatty acid biosynthesis
Cds size237
COG categoryIQ
BRITEko00000,ko00001
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186097.0904477-CDS-P-wetherbeei_contig16774:177..4141683186097.0904477-CDS-P-wetherbeei_contig16774:177..414Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16774 178..414 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16774.1.1prot_P-wetherbeei_contig16774.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig16774 178..414 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig16774.1.1

>prot_P-wetherbeei_contig16774.1.1 ID=prot_P-wetherbeei_contig16774.1.1|Name=mRNA_P-wetherbeei_contig16774.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=79bp
MENIEQRVKKIVAEQLGVNEADVKNESSFVNDLGADSLDTVELVMALEEE
FECEIPDEDAEKITTVQQAIDYVKAHLK*
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mRNA from alignment at P-wetherbeei_contig16774:178..414+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig16774.1.1 ID=mRNA_P-wetherbeei_contig16774.1.1|Name=mRNA_P-wetherbeei_contig16774.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=237bp|location=Sequence derived from alignment at P-wetherbeei_contig16774:178..414+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGAAAATATAGAACAGCGCGTCAAAAAAATTGTGGCCGAGCAACTGGG
CGTCAACGAAGCCGATGTCAAGAACGAATCGTCGTTCGTCAACGACCTCG
GCGCCGATTCCCTCGACACGGTGGAACTGGTGATGGCGCTCGAAGAAGAG
TTCGAGTGCGAAATTCCCGATGAAGACGCGGAAAAAATCACGACCGTCCA
GCAGGCCATCGACTACGTCAAGGCCCACCTCAAGTAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig16774:178..414+

>mRNA_P-wetherbeei_contig16774.1.1 ID=mRNA_P-wetherbeei_contig16774.1.1|Name=mRNA_P-wetherbeei_contig16774.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=237bp|location=Sequence derived from alignment at P-wetherbeei_contig16774:178..414+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGAAAATATAGAACAGCGCGTCAAAAAAATTGTGGCCGAGCAACTGGG
CGTCAACGAAGCCGATGTCAAGAACGAATCGTCGTTCGTCAACGACCTCG
GCGCCGATTCCCTCGACACGGTGGAACTGGTGATGGCGCTCGAAGAAGAG
TTCGAGTGCGAAATTCCCGATGAAGACGCGGAAAAAATCACGACCGTCCA
GCAGGCCATCGACTACGTCAAGGCCCACCTCAAGTAA
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