mRNA_P-wetherbeei_contig16771.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig16771.1.1
Unique NamemRNA_P-wetherbeei_contig16771.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig16771.1.1 vs. uniprot
Match: A0A2E2BD57_9GAMM (Heat-inducible transcription repressor HrcA n=1 Tax=Thiotrichales bacterium TaxID=2026796 RepID=A0A2E2BD57_9GAMM)

HSP 1 Score: 502 bits (1293), Expect = 1.490e-176
Identity = 254/347 (73.20%), Postives = 299/347 (86.17%), Query Frame = 1
Query:   10 INTDMKLGERSQYLFKLLVERYIADGQPVGSRTLARDARLDLSPATIRNVMADLEDMGLIMAPHTSAGRVPTVKGYRLFVDSMVTFRNLSHSEIRHMETSLEHDDDIQGLLNNTSKMLSDVTRLAGLVMIPVSDRRALRQLEFLSLNDNRVLAILVTNDREVENRIIKTNRTYSQSELTQAANYLNSVFAGRDIDAVKARLIKEMAAARDEMNNLMALVIEMTQKVFVDNDTHKDYVLAGQTNLMEINELSDIERLRNLFEAFTQKRDILHLLDQALSASGVQIFIGEESGYEVLDQCSVVTSTYADSHRTLGVLAVIGPTRMEYERVIPIVDLTAKMLSTALNSRS 1050
            +N D+ L +RS +LFK LVERYI+DGQPVGSRTLARDA+LD+S ATIRNVMADLED+GLI +PHTSAGR+PT  GYR FVD +VT+R+LS  E+  +   LE +DDI+ L+N TS+MLS++T+LAGLVM+PV  +RALRQ+EFLSLNDNRVL ILVTNDREVENRIIKTNR Y QSELTQAANYL+S FAG DIDAVK RLI EM A R E++ LM LV+E+++K FV +    DYVLAGQTNLMEI+ELSD+ERLRNLF+AFTQK DILHLLDQA++ASGVQIFIGEESGY+  DQCS+VTSTYAD H+TLGVL VIGPTRM+YERVIPIVDLTAKM S+ALN ++
Sbjct:    1 MNVDINLNDRSHHLFKTLVERYISDGQPVGSRTLARDAKLDISSATIRNVMADLEDLGLIESPHTSAGRIPTELGYRFFVDQVVTYRDLSSMEVDKIGKDLEKEDDIEILMNKTSQMLSELTKLAGLVMVPVKKKRALRQVEFLSLNDNRVLVILVTNDREVENRIIKTNRVYGQSELTQAANYLSSAFAGSDIDAVKKRLIGEMDATRAELDQLMGLVVEISEKAFVGSSLGNDYVLAGQTNLMEIDELSDLERLRNLFDAFTQKGDILHLLDQAVNASGVQIFIGEESGYKAFDQCSIVTSTYADEHKTLGVLGVIGPTRMQYERVIPIVDLTAKMFSSALNYKN 347          
BLAST of mRNA_P-wetherbeei_contig16771.1.1 vs. uniprot
Match: A0A523PDI4_9PROT (Heat-inducible transcription repressor HrcA n=2 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A523PDI4_9PROT)

HSP 1 Score: 482 bits (1240), Expect = 1.850e-168
Identity = 243/348 (69.83%), Postives = 292/348 (83.91%), Query Frame = 1
Query:    1 MARINTDMKLGERSQYLFKLLVERYIADGQPVGSRTLARDARLDLSPATIRNVMADLEDMGLIMAPHTSAGRVPTVKGYRLFVDSMVTFRNLSHSEIRHMETSLEHDDDIQGLLNNTSKMLSDVTRLAGLVMIPVSDRRALRQLEFLSLNDNRVLAILVTNDREVENRIIKTNRTYSQSELTQAANYLNSVFAGRDIDAVKARLIKEMAAARDEMNNLMALVIEMTQKVFVDNDTHKDYVLAGQTNLMEINELSDIERLRNLFEAFTQKRDILHLLDQALSASGVQIFIGEESGYEVLDQCSVVTSTYADSHRTLGVLAVIGPTRMEYERVIPIVDLTAKMLSTALNS 1044
            M     D +LGER+QYLFK LVERYI DGQPVGSRTLARDA+L+LS ATIRNVMADLED+GLI +PHTSAGRVPTVKGYR FVD +VTF+    SEIR +   +  + D++ L+  TS +LSDVT+LAGLVM+P +  +ALRQ+EFLSLNDNRVL ILV NDREV+NR+I+T + Y+ SELTQAANYLN+ F+G++I+AVK  L++EM+  R+EMN +M  V+EMTQKVF+DN+   DYVLAGQTNLM++N+LSDIE LRNLF+AF QKRDILHLLDQAL+A+GVQIFIGEESGYE   +CS+VTS Y +   TLGVLAVIGPTRMEYERVIPIVDLTAKMLS+AL+S
Sbjct:    1 MVNSGQDFELGERAQYLFKCLVERYIVDGQPVGSRTLARDAKLELSTATIRNVMADLEDLGLISSPHTSAGRVPTVKGYRCFVDCIVTFKQPEPSEIRRLSEEVRSEADVRALMERTSALLSDVTKLAGLVMMPKTQHQALRQVEFLSLNDNRVLVILVINDREVQNRVIQTAKCYTPSELTQAANYLNNAFSGKNINAVKKDLLREMSTTREEMNRMMQAVVEMTQKVFIDNEVENDYVLAGQTNLMDLNQLSDIETLRNLFDAFNQKRDILHLLDQALNATGVQIFIGEESGYEAFGECSIVTSPYGEGE-TLGVLAVIGPTRMEYERVIPIVDLTAKMLSSALSS 347          
BLAST of mRNA_P-wetherbeei_contig16771.1.1 vs. uniprot
Match: A0A1Z8WU42_9GAMM (Heat-inducible transcription repressor HrcA n=1 Tax=Methylococcaceae bacterium TMED69 TaxID=1986766 RepID=A0A1Z8WU42_9GAMM)

HSP 1 Score: 478 bits (1231), Expect = 4.330e-167
Identity = 244/348 (70.11%), Postives = 288/348 (82.76%), Query Frame = 1
Query:    7 RINTDMKLGERSQYLFKLLVERYIADGQPVGSRTLARDARLDLSPATIRNVMADLEDMGLIMAPHTSAGRVPTVKGYRLFVDSMVTFRNLSHSEIRHMETSLEHDDDIQGLLNNTSKMLSDVTRLAGLVMIPVSDRRALRQLEFLSLNDNRVLAILVTNDREVENRIIKTNRTYSQSELTQAANYLNSVFAGRDIDAVKARLIKEMAAARDEMNNLMALVIEMTQKVFVDNDTHKDYVLAGQTNLMEINELSDIERLRNLFEAFTQKRDILHLLDQALSASGVQIFIGEESGYEVLDQCSVVTSTYADSHRTLGVLAVIGPTRMEYERVIPIVDLTAKMLSTALNSRS 1050
            R   D+ L +R Q+LFK LVERYI DGQPVGSRTLARD  LDLSPATIRNVMADLE+MGLI +PHTSAGR+PTVKGYRLFVD MV F+N+  +E++ ++  LE++D +  LL+ TS +LS++T +AGLVM+P S  +ALRQ+EFLSLNDNRVL ILVTND EVENRIIKT +TYSQS LTQAANYL S FAGRDI AVK  LI+EM+ AR EM  LM LVIEM+QK FV  +  KDYVLAGQTNLM I + S++ +LRNLFEAF QK+DILHLLDQA +A+GVQ+FIGEESGY+ LD C+VVTSTY+  H+ LGVL VIGPTRMEYERVIPIVDLTAKML+ AL S++
Sbjct:    2 RKKQDLGLKDRPQHLFKKLVERYIIDGQPVGSRTLARDVNLDLSPATIRNVMADLEEMGLIASPHTSAGRIPTVKGYRLFVDQMVRFKNIPENEMQKIQEQLENNDSVDSLLSKTSLLLSEITHMAGLVMVPFSKGKALRQVEFLSLNDNRVLVILVTNDSEVENRIIKTKKTYSQSALTQAANYLTSAFAGRDISAVKQGLIQEMSEARREMYRLMDLVIEMSQKAFVSEEGEKDYVLAGQTNLMNIYDPSEMSKLRNLFEAFNQKQDILHLLDQATNAAGVQVFIGEESGYQPLDDCTVVTSTYSSKHKVLGVLGVIGPTRMEYERVIPIVDLTAKMLTAALKSKN 349          
BLAST of mRNA_P-wetherbeei_contig16771.1.1 vs. uniprot
Match: A0A3D5DHC9_9GAMM (Heat-inducible transcription repressor HrcA n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DHC9_9GAMM)

HSP 1 Score: 475 bits (1222), Expect = 1.050e-165
Identity = 238/348 (68.39%), Postives = 290/348 (83.33%), Query Frame = 1
Query:    1 MARINTDMKLGERSQYLFKLLVERYIADGQPVGSRTLARDARLDLSPATIRNVMADLEDMGLIMAPHTSAGRVPTVKGYRLFVDSMVTFRNLSHSEIRHMETSLEHDDDIQGLLNNTSKMLSDVTRLAGLVMIPVSDRRALRQLEFLSLNDNRVLAILVTNDREVENRIIKTNRTYSQSELTQAANYLNSVFAGRDIDAVKARLIKEMAAARDEMNNLMALVIEMTQKVFVDNDTHKDYVLAGQTNLMEINELSDIERLRNLFEAFTQKRDILHLLDQALSASGVQIFIGEESGYEVLDQCSVVTSTYADSHRTLGVLAVIGPTRMEYERVIPIVDLTAKMLSTALNS 1044
            M  +  +M+L ER+Q+LFK L+ERYI+DGQPVGSRTLARDA+L+LSPATIRNVMADLED GLI +PHTSAGRVPTVKGYR+FVD MVTF++ + +EI  +   +  + D++ L+  TS +LSDVT+LAGLVM+P  +  ALRQ+EFL LNDNRVL ILV ND EV+NR+I+T RTYS SELTQAANYLNS FAG++I+AVK  L++EM A   EMN++M  V+EMTQKVFV+++   D+V+AGQTNLM++NELS+IE+LR LF+AF QKRDILHLLDQAL+A+GVQIFIGEESGY  LD CS+VTS Y     T+GVLAVIGPTRM YERVIPIVD+TAKML TALNS
Sbjct:    1 MVDLGQEMELSERAQHLFKCLIERYISDGQPVGSRTLARDAKLELSPATIRNVMADLEDCGLISSPHTSAGRVPTVKGYRMFVDCMVTFKSPAPNEILRLNDEVRSEADVRALMEKTSSLLSDVTKLAGLVMMPKIESHALRQVEFLPLNDNRVLVILVVNDHEVQNRVIQTARTYSPSELTQAANYLNSAFAGKNINAVKKDLLREMRATHQEMNSMMQAVVEMTQKVFVESEAANDFVVAGQTNLMDVNELSNIEKLRGLFDAFNQKRDILHLLDQALTATGVQIFIGEESGYAALDDCSIVTSPYGGDGETVGVLAVIGPTRMAYERVIPIVDITAKMLGTALNS 348          
BLAST of mRNA_P-wetherbeei_contig16771.1.1 vs. uniprot
Match: A0A1G0JBV7_9GAMM (Heat-inducible transcription repressor HrcA n=1 Tax=Gammaproteobacteria bacterium RIFCSPLOWO2_12_47_11 TaxID=1798301 RepID=A0A1G0JBV7_9GAMM)

HSP 1 Score: 424 bits (1089), Expect = 1.720e-145
Identity = 211/342 (61.70%), Postives = 268/342 (78.36%), Query Frame = 1
Query:   25 KLGERSQYLFKLLVERYIADGQPVGSRTLARDARLDLSPATIRNVMADLEDMGLIMAPHTSAGRVPTVKGYRLFVDSMVTFRNLSHSEIRHMETSLEHDDDIQGLLNNTSKMLSDVTRLAGLVMIPVSDRRALRQLEFLSLNDNRVLAILVTNDREVENRIIKTNRTYSQSELTQAANYLNSVFAGRDIDAVKARLIKEMAAARDEMNNLMALVIEMTQKVFVDNDTHKDYVLAGQTNLMEINELSDIERLRNLFEAFTQKRDILHLLDQALSASGVQIFIGEESGYEVLDQCSVVTSTYADSHRTLGVLAVIGPTRMEYERVIPIVDLTAKMLSTALNSRS 1050
            ++ ERS +LFKLLVE +I DGQPVGSRTLARD  L+LSPATIRNVMADLE+MGL+ +PHTSAGRVPTVKGYRLFVDS++    L+  EI H+   L+   D+Q LL  TS MLSD+TRLAG+V +P  D+ AL+ +EF+SL+D+R+L ILV ND +++NRII T R Y+ SEL QA+NYLN  FAG+D+  ++A ++ E+   +D ++ +M   IEM Q+ F+ NDT  D+VLAGQTNLM++ EL D+ERL+ LF +F QKRDILHLL+Q++ A GVQIFIGEE+GY+VLD CSVVTS Y    + LGVL VIGPTRM YERVIPIVD+TAKML  ALNS++
Sbjct:    9 QIPERSLHLFKLLVEHFIQDGQPVGSRTLARDTDLELSPATIRNVMADLEEMGLLHSPHTSAGRVPTVKGYRLFVDSLLRVHALNEREIEHIAEELKSRQDMQSLLQRTSNMLSDITRLAGIVTLPRQDQHALKHVEFVSLSDDRILVILVINDNQIQNRIINTARVYTPSELQQASNYLNQKFAGKDLATIRAGILSELKRMKDNVSQIMQTAIEMAQQAFLKNDTGDDFVLAGQTNLMDVAELCDVERLKKLFNSFNQKRDILHLLEQSIHARGVQIFIGEEAGYDVLDNCSVVTSPYEVDGQILGVLGVIGPTRMHYERVIPIVDITAKMLGLALNSQN 350          
BLAST of mRNA_P-wetherbeei_contig16771.1.1 vs. uniprot
Match: A0A1S9D211_9GAMM (Heat-inducible transcription repressor HrcA n=1 Tax=Chromatiales bacterium USCg_Taylor TaxID=1934255 RepID=A0A1S9D211_9GAMM)

HSP 1 Score: 422 bits (1085), Expect = 6.500e-145
Identity = 214/339 (63.13%), Postives = 267/339 (78.76%), Query Frame = 1
Query:   28 LGERSQYLFKLLVERYIADGQPVGSRTLARDARLDLSPATIRNVMADLEDMGLIMAPHTSAGRVPTVKGYRLFVDSMVTFRNLSHSEIRHMETSLEHDDDIQGLLNNTSKMLSDVTRLAGLVMIPVSDRRALRQLEFLSLNDNRVLAILVTNDREVENRIIKTNRTYSQSELTQAANYLNSVFAGRDIDAVKARLIKEMAAARDEMNNLMALVIEMTQKVFVDNDTHKDYVLAGQTNLMEINELSDIERLRNLFEAFTQKRDILHLLDQALSASGVQIFIGEESGYEVLDQCSVVTSTYADSHRTLGVLAVIGPTRMEYERVIPIVDLTAKMLSTALNS 1044
            L  R+Q+LFKLLVERYI DGQP+GSRTLARDA ++LSPATIRNVMADLED+GL+ +PHTSAGRVPT +GYRLFVDS++T + +S  +++ +   L  +DDI  LL  TS +LS+VT+LAG+VM+P ++ RALR +EFL ++D RVL ILV N  EV NR+I T RTYS+SEL QA+NYLN  FAG ++  V+ +LI EM++A+ EMN +M   +EM QKVF     H DYV AGQTNLM I+  +D+ +LR LFEAF+QKR+ILHLLDQ L+A GVQIFIG+ESGYE LD CS+VTSTY+   R LGVL +IGPTRM YERVIPIVD+TAK+L  AL S
Sbjct:   10 LSARAQHLFKLLVERYIVDGQPIGSRTLARDAGMELSPATIRNVMADLEDLGLVRSPHTSAGRVPTTRGYRLFVDSLLTVKEVSEQDVKRLRADLGTEDDINRLLAKTSNLLSEVTQLAGVVMVPRTEHRALRHVEFLKMSDTRVLVILVINHNEVHNRVICTARTYSESELQQASNYLNHAFAGEELVDVRNQLIGEMSSAQQEMNRMMQAAVEMAQKVF--ETPHDDYVWAGQTNLMGIDAWADMAKLRQLFEAFSQKREILHLLDQGLNAQGVQIFIGDESGYEFLDDCSLVTSTYSADGRVLGVLGIIGPTRMAYERVIPIVDITAKVLGVALKS 346          
BLAST of mRNA_P-wetherbeei_contig16771.1.1 vs. uniprot
Match: A0A1G0FUM4_9GAMM (Heat-inducible transcription repressor HrcA n=1 Tax=Gammaproteobacteria bacterium RBG_16_51_14 TaxID=1798265 RepID=A0A1G0FUM4_9GAMM)

HSP 1 Score: 421 bits (1083), Expect = 1.400e-144
Identity = 207/343 (60.35%), Postives = 268/343 (78.13%), Query Frame = 1
Query:   22 MKLGERSQYLFKLLVERYIADGQPVGSRTLARDARLDLSPATIRNVMADLEDMGLIMAPHTSAGRVPTVKGYRLFVDSMVTFRNLSHSEIRHMETSLEHDDDIQGLLNNTSKMLSDVTRLAGLVMIPVSDRRALRQLEFLSLNDNRVLAILVTNDREVENRIIKTNRTYSQSELTQAANYLNSVFAGRDIDAVKARLIKEMAAARDEMNNLMALVIEMTQKVFVDNDTHKDYVLAGQTNLMEINELSDIERLRNLFEAFTQKRDILHLLDQALSASGVQIFIGEESGYEVLDQCSVVTSTYADSHRTLGVLAVIGPTRMEYERVIPIVDLTAKMLSTALNSRS 1050
            ++L ERS  LFK LV+ +I DG PVGSRTLARD  L+LSPATIRN+MADLED+GL+ +PHTSAGR+PT KGYRLFVDS++   +L  SEI  +   L+   D++ LLN TS MLSD+TRL  +VM+P SD+  L+ +EF++L+DNRVL IL+ +DRE++NRII T R YS SEL QA+NYLN VF+G+++  V+  LI E+   +D ++ LM + IEM QK F+  ++  DYVL+GQTNLM + E+ D+E+LR LFE+F QKRDILHLL+Q++ A+GVQIFIGEESGYEVLD CS+VTS Y    + LGVL +IGPTRM Y+RVIPIVD+TAKML +ALNSR+
Sbjct:    8 IQLPERSLQLFKALVDHFIQDGHPVGSRTLARDTNLELSPATIRNIMADLEDLGLLRSPHTSAGRIPTAKGYRLFVDSLLCVHDLDSSEIEKIAKELDSGQDMKSLLNRTSSMLSDITRLVSVVMLPRSDQPVLQHVEFVTLSDNRVLVILIVSDREIQNRIIHTARVYSASELQQASNYLNKVFSGKELTKVRTELIHELEQMKDNVSQLMQMAIEMAQKAFMSGESGDDYVLSGQTNLMNVAEMCDVEKLRKLFESFNQKRDILHLLEQSIHATGVQIFIGEESGYEVLDDCSIVTSPYEVDGQILGVLGIIGPTRMHYDRVIPIVDITAKMLGSALNSRN 350          
BLAST of mRNA_P-wetherbeei_contig16771.1.1 vs. uniprot
Match: A0A1G0K2E4_9GAMM (Heat-inducible transcription repressor HrcA n=2 Tax=unclassified Gammaproteobacteria TaxID=33811 RepID=A0A1G0K2E4_9GAMM)

HSP 1 Score: 419 bits (1078), Expect = 8.940e-144
Identity = 209/343 (60.93%), Postives = 273/343 (79.59%), Query Frame = 1
Query:   19 DMKLGERSQYLFKLLVERYIADGQPVGSRTLARDARLDLSPATIRNVMADLEDMGLIMAPHTSAGRVPTVKGYRLFVDSMVTFRNLSHSEIRHMETSLEHDDDIQGLLNNTSKMLSDVTRLAGLVMIPVSDRRALRQLEFLSLNDNRVLAILVTNDREVENRIIKTNRTYSQSELTQAANYLNSVFAGRDIDAVKARLIKEMAAARDEMNNLMALVIEMTQKVFVDNDTHKD-YVLAGQTNLMEINELSDIERLRNLFEAFTQKRDILHLLDQALSASGVQIFIGEESGYEVLDQCSVVTSTYADSHRTLGVLAVIGPTRMEYERVIPIVDLTAKMLSTALNS 1044
            ++ L ERS  LFK LVE +I DG PVGSRTLARD++LDLSPATIRNVM+DLEDMGLI +PHTSAGRVPTV+GYRLFVDS++    L  + +  +        +I+ L+  TS MLS++T+LAG+VM+P  + +AL Q+EF+SL DNR+L ILV ND+E++NRII TNR +SQSEL QA+NYLNS+++G+++  V+  L+KE+   + ++NNLM   IEM QK FV +++ +D YVLAGQTNLM + EL+D+E+LR LF++F+ KRDILHLL+QA+ A G+QIFIGEESGY+VLD CS+VTS Y    + LGVL V+GPTRM+YER+IPIVD+TAKMLSTALNS
Sbjct:    9 NILLSERSLSLFKALVEHFILDGHPVGSRTLARDSKLDLSPATIRNVMSDLEDMGLIHSPHTSAGRVPTVRGYRLFVDSLLRVDKLEQTAVERITREFGAGGNIKELMERTSSMLSEITKLAGIVMLPRVEHKALAQIEFISLTDNRILVILVMNDKEIQNRIIVTNRQFSQSELQQASNYLNSMYSGKELHTVRKDLLKELEKMKQDVNNLMQAAIEMAQKAFVQSESKQDDYVLAGQTNLMNLAELNDMEKLRKLFDSFSAKRDILHLLEQAIQAKGMQIFIGEESGYDVLDNCSIVTSPYEVDGQILGVLGVLGPTRMDYERIIPIVDITAKMLSTALNS 351          
BLAST of mRNA_P-wetherbeei_contig16771.1.1 vs. uniprot
Match: A0A1G5PJ66_9GAMM (Heat-inducible transcription repressor HrcA n=2 Tax=Thiohalomonas denitrificans TaxID=415747 RepID=A0A1G5PJ66_9GAMM)

HSP 1 Score: 414 bits (1063), Expect = 1.330e-141
Identity = 210/339 (61.95%), Postives = 267/339 (78.76%), Query Frame = 1
Query:   25 KLGERSQYLFKLLVERYIADGQPVGSRTLARDARLDLSPATIRNVMADLEDMGLIMAPHTSAGRVPTVKGYRLFVDSMVTFRNLSHSEIRHMETSLEHDDDIQGLLNNTSKMLSDVTRLAGLVMIPVSDRRALRQLEFLSLNDNRVLAILVTNDREVENRIIKTNRTYSQSELTQAANYLNSVFAGRDIDAVKARLIKEMAAARDEMNNLMALVIEMTQKVFVDNDTHKDYVLAGQTNLMEINELSDIERLRNLFEAFTQKRDILHLLDQALSASGVQIFIGEESGYEVLDQCSVVTSTYADSHRTLGVLAVIGPTRMEYERVIPIVDLTAKMLSTALN 1041
            +L ER+QYLFK LVER+I DGQPVGSRTLARD++L+LSPATIRNVMADLE++GLI +PHTSAGRVPT +GYR FVDS++T R L  +E+R +E   E  +D   LL++ S +LSD+T LAG+VM+P  ++ ALRQ+EFL L+ +RVL ILV N+REV+NRII T R YS SELTQAAN++N  FAGR +  V+ RLI++M A R++M+ LM   +EM Q+ F ++D   DY++AG+TNLM   E+SD++RLR LFEAF  KRDILHLLDQ+L+A G+QIFIG E+GYE LD CS+VTS Y    R +GVL VIGPTRM Y RVIPIVD+TA++L  ALN
Sbjct:    5 ELTERAQYLFKALVERHIRDGQPVGSRTLARDSKLNLSPATIRNVMADLEEIGLIQSPHTSAGRVPTAQGYRFFVDSLLTIRPLDEAELRSLEAQFESGEDPGRLLSSASSLLSDITSLAGVVMLPRREQVALRQIEFLPLSASRVLVILVVNEREVQNRIIHTTRRYSSSELTQAANFINEHFAGRTLRDVRNRLIQQMQADREDMDRLMRSALEMAQQAFSEDDDEDDYLMAGETNLMSYAEMSDMKRLRQLFEAFGTKRDILHLLDQSLAADGLQIFIGNEAGYEALDVCSIVTSPYKVEDRVVGVLGVIGPTRMAYGRVIPIVDVTARLLGAALN 343          
BLAST of mRNA_P-wetherbeei_contig16771.1.1 vs. uniprot
Match: A0A521RH78_9GAMM (Heat-inducible transcription repressor HrcA n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A521RH78_9GAMM)

HSP 1 Score: 410 bits (1054), Expect = 3.940e-140
Identity = 210/353 (59.49%), Postives = 267/353 (75.64%), Query Frame = 1
Query:    1 MARINTDMK-LGERSQYLFKLLVERYIADGQPVGSRTLARDARLDLSPATIRNVMADLEDMGLIMAPHTSAGRVPTVKGYRLFVDSMVTFRNLSHSEIRHMETSLEHDDDIQGLLNNTSKMLSDVTRLAGLVMIPVSDRRALRQLEFLSLNDNRVLAILVTNDREVENRIIKTNRTYSQSELTQAANYLNSVFAGRDIDAVKARLIKEMAAARDEMNNLMALVIEMTQKVFVDNDT--HKDYVLAGQTNLMEINELSDIERLRNLFEAFTQKRDILHLLDQALSASGVQIFIGEESGYEVLDQCSVVTSTYADSHRTLGVLAVIGPTRMEYERVIPIVDLTAKMLSTALNSRS 1050
            M  + TD   L ERS +LFK LVE +I DGQPVGSRTLARD   DLSPATIRNVMADLED+GL+MAPHTSAGR+PT +GYRLFVD+++    L       +   LE   D+  LL  TS+MLS++T LAG+VM+P ++ R+LRQ+EFLSL+DNRVL ILV ND E++NRII TNRTY+ +EL QAANYLN++++G+D+  V+  ++ E+   R+++N+ M   IEM QK F  +      DY+L+G TNLM + ELS++E+L+ LF++F QKRDILHLL+QA++A GVQIFIGEESGYEVL  CSVVTS Y    + LGVL V+GPTRM YERVIP+VD+TAKML  ALNS S
Sbjct:    1 MKTLTTDPSTLSERSLFLFKSLVEHFIMDGQPVGSRTLARDIGSDLSPATIRNVMADLEDLGLLMAPHTSAGRIPTARGYRLFVDTLLRVDKLDDKHAARIARELEKGKDVHLLLEKTSEMLSEITSLAGIVMLPRTNPRSLRQVEFLSLSDNRVLVILVVNDEEIQNRIIHTNRTYTAAELQQAANYLNAMYSGKDLQRVRQEILAELHKMREDVNSSMQFAIEMAQKAFAQDPQMPRGDYLLSGHTNLMNVAELSNLEKLKKLFDSFNQKRDILHLLEQAINAEGVQIFIGEESGYEVLGDCSVVTSPYEVDGQILGVLGVLGPTRMNYERVIPVVDITAKMLGMALNSSS 353          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16771.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E2BD57_9GAMM1.490e-17673.20Heat-inducible transcription repressor HrcA n=1 Ta... [more]
A0A523PDI4_9PROT1.850e-16869.83Heat-inducible transcription repressor HrcA n=2 Ta... [more]
A0A1Z8WU42_9GAMM4.330e-16770.11Heat-inducible transcription repressor HrcA n=1 Ta... [more]
A0A3D5DHC9_9GAMM1.050e-16568.39Heat-inducible transcription repressor HrcA n=1 Ta... [more]
A0A1G0JBV7_9GAMM1.720e-14561.70Heat-inducible transcription repressor HrcA n=1 Ta... [more]
A0A1S9D211_9GAMM6.500e-14563.13Heat-inducible transcription repressor HrcA n=1 Ta... [more]
A0A1G0FUM4_9GAMM1.400e-14460.35Heat-inducible transcription repressor HrcA n=1 Ta... [more]
A0A1G0K2E4_9GAMM8.940e-14460.93Heat-inducible transcription repressor HrcA n=2 Ta... [more]
A0A1G5PJ66_9GAMM1.330e-14161.95Heat-inducible transcription repressor HrcA n=2 Ta... [more]
A0A521RH78_9GAMM3.940e-14059.49Heat-inducible transcription repressor HrcA n=1 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16771contigP-wetherbeei_contig16771:404..1456 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog323261.Noc_2813
Preferred namehrcA
PFAMsHrcA,HrcA_DNA-bdg
Model size1053
Max annot lvl135613|Chromatiales
KEGG koko:K03705
Hectar predicted targeting categoryother localisation
Exons1
Evalue5.76e-136
EggNOG OGsCOG1420@1|root,COG1420@2|Bacteria,1MVX4@1224|Proteobacteria,1RR2F@1236|Gammaproteobacteria,1WXB7@135613|Chromatiales
DescriptionNegative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
Cds size1053
COG categoryK
BRITEko00000,ko03000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186097.025685-CDS-P-wetherbeei_contig16771:403..14561683186097.025685-CDS-P-wetherbeei_contig16771:403..1456Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16771 404..1456 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16771.1.1prot_P-wetherbeei_contig16771.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig16771 404..1456 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig16771.1.1

>prot_P-wetherbeei_contig16771.1.1 ID=prot_P-wetherbeei_contig16771.1.1|Name=mRNA_P-wetherbeei_contig16771.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=351bp
MARINTDMKLGERSQYLFKLLVERYIADGQPVGSRTLARDARLDLSPATI
RNVMADLEDMGLIMAPHTSAGRVPTVKGYRLFVDSMVTFRNLSHSEIRHM
ETSLEHDDDIQGLLNNTSKMLSDVTRLAGLVMIPVSDRRALRQLEFLSLN
DNRVLAILVTNDREVENRIIKTNRTYSQSELTQAANYLNSVFAGRDIDAV
KARLIKEMAAARDEMNNLMALVIEMTQKVFVDNDTHKDYVLAGQTNLMEI
NELSDIERLRNLFEAFTQKRDILHLLDQALSASGVQIFIGEESGYEVLDQ
CSVVTSTYADSHRTLGVLAVIGPTRMEYERVIPIVDLTAKMLSTALNSRS
*
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mRNA from alignment at P-wetherbeei_contig16771:404..1456-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig16771.1.1 ID=mRNA_P-wetherbeei_contig16771.1.1|Name=mRNA_P-wetherbeei_contig16771.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1053bp|location=Sequence derived from alignment at P-wetherbeei_contig16771:404..1456- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCAAGAATAAACACAGACATGAAACTCGGTGAACGCTCTCAATACCT GTTCAAATTGCTGGTCGAGCGCTACATAGCCGACGGCCAACCGGTAGGCT CGCGCACCTTGGCGCGTGACGCCAGGCTCGACCTGAGTCCCGCCACCATC CGCAATGTCATGGCGGATCTGGAAGACATGGGCCTCATCATGGCGCCCCA CACCTCGGCTGGTCGTGTGCCGACGGTCAAGGGTTATCGTCTGTTCGTGG ACTCCATGGTCACCTTCCGCAATCTCAGCCACAGCGAGATTCGGCACATG GAGACCAGCCTTGAGCACGATGACGACATCCAGGGGCTGCTCAACAACAC CTCGAAAATGCTGTCGGATGTCACGCGTCTGGCGGGTCTGGTAATGATTC CGGTGTCGGATCGGCGCGCGCTGCGGCAGCTCGAATTCCTGTCCTTGAAC GACAATCGCGTGCTGGCGATCCTGGTGACCAACGACCGCGAGGTCGAGAA TCGCATCATCAAGACCAATCGCACCTACAGCCAGTCCGAGCTGACCCAGG CCGCCAACTATCTCAACAGCGTGTTCGCCGGGCGCGATATCGACGCGGTC AAGGCCCGTCTCATCAAGGAAATGGCGGCCGCCCGCGACGAGATGAATAA TCTGATGGCGCTGGTCATCGAGATGACCCAGAAGGTCTTCGTCGACAACG ACACGCACAAGGACTACGTGCTGGCGGGCCAGACCAATCTCATGGAGATC AACGAGCTGTCGGACATTGAGCGCTTGCGCAATCTGTTCGAAGCCTTTAC CCAGAAGCGCGATATCCTGCACCTGCTGGACCAGGCGCTATCCGCCTCGG GTGTGCAGATCTTCATCGGCGAGGAATCGGGCTACGAAGTGCTGGATCAG TGCTCGGTGGTGACCTCGACCTATGCCGACAGCCATCGCACCCTGGGTGT GCTGGCAGTGATCGGGCCGACCCGCATGGAATATGAGCGGGTCATCCCGA TAGTCGACCTGACGGCGAAGATGCTCAGTACCGCCTTGAATTCCCGTAGC TGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig16771:404..1456-

>mRNA_P-wetherbeei_contig16771.1.1 ID=mRNA_P-wetherbeei_contig16771.1.1|Name=mRNA_P-wetherbeei_contig16771.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1053bp|location=Sequence derived from alignment at P-wetherbeei_contig16771:404..1456- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCAAGAATAAACACAGACATGAAACTCGGTGAACGCTCTCAATACCT
GTTCAAATTGCTGGTCGAGCGCTACATAGCCGACGGCCAACCGGTAGGCT
CGCGCACCTTGGCGCGTGACGCCAGGCTCGACCTGAGTCCCGCCACCATC
CGCAATGTCATGGCGGATCTGGAAGACATGGGCCTCATCATGGCGCCCCA
CACCTCGGCTGGTCGTGTGCCGACGGTCAAGGGTTATCGTCTGTTCGTGG
ACTCCATGGTCACCTTCCGCAATCTCAGCCACAGCGAGATTCGGCACATG
GAGACCAGCCTTGAGCACGATGACGACATCCAGGGGCTGCTCAACAACAC
CTCGAAAATGCTGTCGGATGTCACGCGTCTGGCGGGTCTGGTAATGATTC
CGGTGTCGGATCGGCGCGCGCTGCGGCAGCTCGAATTCCTGTCCTTGAAC
GACAATCGCGTGCTGGCGATCCTGGTGACCAACGACCGCGAGGTCGAGAA
TCGCATCATCAAGACCAATCGCACCTACAGCCAGTCCGAGCTGACCCAGG
CCGCCAACTATCTCAACAGCGTGTTCGCCGGGCGCGATATCGACGCGGTC
AAGGCCCGTCTCATCAAGGAAATGGCGGCCGCCCGCGACGAGATGAATAA
TCTGATGGCGCTGGTCATCGAGATGACCCAGAAGGTCTTCGTCGACAACG
ACACGCACAAGGACTACGTGCTGGCGGGCCAGACCAATCTCATGGAGATC
AACGAGCTGTCGGACATTGAGCGCTTGCGCAATCTGTTCGAAGCCTTTAC
CCAGAAGCGCGATATCCTGCACCTGCTGGACCAGGCGCTATCCGCCTCGG
GTGTGCAGATCTTCATCGGCGAGGAATCGGGCTACGAAGTGCTGGATCAG
TGCTCGGTGGTGACCTCGACCTATGCCGACAGCCATCGCACCCTGGGTGT
GCTGGCAGTGATCGGGCCGACCCGCATGGAATATGAGCGGGTCATCCCGA
TAGTCGACCTGACGGCGAAGATGCTCAGTACCGCCTTGAATTCCCGTAGC
TGA
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