mRNA_P-wetherbeei_contig1676.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1676.2.1 vs. uniprot
Match: A0A3C0TRK3_9PROT (LuxR family transcriptional regulator n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TRK3_9PROT) HSP 1 Score: 448 bits (1152), Expect = 7.410e-158 Identity = 216/256 (84.38%), Postives = 234/256 (91.41%), Query Frame = 1
Query: 4 MLVDSHCHLDFPDFSGEMDNVVRRAGLAGIGMMLTICTRISEFERISDVAGKFDHIYCSVGIHPHEADNEPAADCARIVSLTGHPKVIGIGETGLDYFYEHGSRAAQKTSFRAHIAAARETGLPLIVHARDADSDTIEILQDEAGKGAFPGVIHCFTAGPELARAALDLGLYISLSGIVTFKNAKDLRETAKMIPSDRLLIETDAPFLAPMPHRGKRNEPAFVADTARYLAEFFGETREAFAARTTDNFFTLFTKA 771
MLVDSHCHLDFPDF+G+ +V+RRA +A IGMMLTICTRIS FERI +A +FDHIYCSVGIHPHEADNEPA D +RI +LT HPKVIGIGETGLDY+YEHGSR AQK+SF AHIAA+RETGLPLIVHARDAD D I IL+DEAGKGAFPGVIHCFTAG ELARAALDLG+YISLSGIVTFKNAKDLRETA+MIP DRLLIETDAPFLAP+PHRGKRNEPAFVADTARYLAEFFGETRE FA+RTT+NFF LF KA
Sbjct: 1 MLVDSHCHLDFPDFNGDRKDVLRRAAMADIGMMLTICTRISVFERIRAIAEEFDHIYCSVGIHPHEADNEPAVDASRIAALTDHPKVIGIGETGLDYYYEHGSREAQKSSFGAHIAASRETGLPLIVHARDADEDMIAILRDEAGKGAFPGVIHCFTAGAELARAALDLGMYISLSGIVTFKNAKDLRETARMIPPDRLLIETDAPFLAPVPHRGKRNEPAFVADTARYLAEFFGETREEFASRTTENFFRLFRKA 256
BLAST of mRNA_P-wetherbeei_contig1676.2.1 vs. uniprot
Match: A0A3B9BMT5_9PROT (LuxR family transcriptional regulator n=3 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3B9BMT5_9PROT) HSP 1 Score: 371 bits (952), Expect = 2.180e-127 Identity = 174/258 (67.44%), Postives = 214/258 (82.95%), Query Frame = 1
Query: 4 MLVDSHCHLDFPDFSGEMDNVVRRAGLAGIGMMLTICTRISEFERISDVAGKFDHIYCSVGIHPHEADNEPAADCARIVSLTGHPKVIGIGETGLDYFYEHGSRAAQKTSFRAHIAAARETGLPLIVHARDADSDTIEILQDEAGKGAFPGVIHCFTAGPELARAALDLGLYISLSGIVTFKNAKDLRETAKMIPSDRLLIETDAPFLAPMPHRGKRNEPAFVADTARYLAEFFGETREAFAARTTDNFFTLFTKADR 777
MLVDSHCHLDFP+F+ ++D VV RA AG+G M+TICT +++F ++ VA +F +I+C+VGIHPHEA++EP D A +++L G KV+GIGETGLDY+Y++ RAAQ+ +FRAHIAAAR TGLPLIVH+RDAD DTI IL++EA KGAFPG+IHCFTAGPELARAA+DLGLYISLSGIVTFK+A DLRETA+ IP +RLL+ETDAPFLAP+P RGK NEPA+VA TA Y+AE G A A TTDNFF LF++A R
Sbjct: 1 MLVDSHCHLDFPEFADDLDGVVARAEAAGVGTMVTICTHVTKFAQVQAVARRFPNIFCTVGIHPHEAESEPDTDAATLITLAGSDKVVGIGETGLDYYYDNAPRAAQRRAFRAHIAAARATGLPLIVHSRDADEDTIAILREEADKGAFPGLIHCFTAGPELARAAIDLGLYISLSGIVTFKSAADLRETARQIPHERLLVETDAPFLAPVPRRGKTNEPAYVAHTAAYVAEMLGMEPAALADLTTDNFFRLFSRAHR 258
BLAST of mRNA_P-wetherbeei_contig1676.2.1 vs. uniprot
Match: A0A3D4F3W2_9HYPH (LuxR family transcriptional regulator n=1 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A3D4F3W2_9HYPH) HSP 1 Score: 362 bits (929), Expect = 7.370e-124 Identity = 173/256 (67.58%), Postives = 205/256 (80.08%), Query Frame = 1
Query: 4 MLVDSHCHLDFPDFSGEMDNVVRRAGLAGIGMMLTICTRISEFERISDVAGKFDHIYCSVGIHPHEADNEPAADCARIVSLTGHPKVIGIGETGLDYFYEHGSRAAQKTSFRAHIAAARETGLPLIVHARDADSDTIEILQDEAGKGAFPGVIHCFTAGPELARAALDLGLYISLSGIVTFKNAKDLRETAKMIPSDRLLIETDAPFLAPMPHRGKRNEPAFVADTARYLAEFFGETREAFAARTTDNFFTLFTKA 771
MLVDSHCHLDF DF + ++VV RA AGIG+M+TI T+I+E E+I +A ++D + CSVGIHPHEA NEP IV L+ HPKV+G+GETGLDYFYEH R AQ+ +FRAHIAAARETGLPLIVHARDAD DT +IL+DE KGAFPG+IHCFTAGPELA+ ALD+G YIS+SGI TFKNA+ LR+T +M+P DRLL+ETDAPFLAP+PHRGKRNEP+FVADTA LA F A +TT NFF LF+KA
Sbjct: 1 MLVDSHCHLDFDDFDEDRNDVVARARAAGIGLMVTISTKITEAEKIIALAERYDDVVCSVGIHPHEAGNEPPTSADDIVRLSRHPKVVGVGETGLDYFYEHSPRDAQQRNFRAHIAAARETGLPLIVHARDADIDTADILEDEMAKGAFPGLIHCFTAGPELAQRALDIGFYISISGIATFKNAETLRQTIRMVPEDRLLVETDAPFLAPVPHRGKRNEPSFVADTATALATLFETDYATLANQTTQNFFRLFSKA 256
BLAST of mRNA_P-wetherbeei_contig1676.2.1 vs. uniprot
Match: K2K067_9PROT (TatD family hydrolase n=3 Tax=Oceanibaculum TaxID=659693 RepID=K2K067_9PROT) HSP 1 Score: 359 bits (921), Expect = 1.090e-122 Identity = 167/255 (65.49%), Postives = 203/255 (79.61%), Query Frame = 1
Query: 4 MLVDSHCHLDFPDFSGEMDNVVRRAGLAGIGMMLTICTRISEFERISDVAGKFDHIYCSVGIHPHEADNEPAADCARIVSLTGHPKVIGIGETGLDYFYEHGSRAAQKTSFRAHIAAARETGLPLIVHARDADSDTIEILQDEAGKGAFPGVIHCFTAGPELARAALDLGLYISLSGIVTFKNAKDLRETAKMIPSDRLLIETDAPFLAPMPHRGKRNEPAFVADTARYLAEFFGETREAFAARTTDNFFTLFTK 768
MLVDSHCHLDFPDF E+D VV RA AG+G M+TICT+I+EFER+ +A ++D IYC+VGIHPHEAD++P D AR+V HPKV+GIGETGLDYFYEH +R AQ+ SFRAHI A+RETGLPL+VH RDAD DT+ IL+DE G+G +PG+IHCF++ LA L LGLYISLSGIVTFK A++LRET K +P DR+L+ETD+P+LAP+PHRGKRNEPAFVA TA+ +AE G ARTT+NF LF K
Sbjct: 1 MLVDSHCHLDFPDFGEELDAVVARARAAGVGRMVTICTKITEFERVRAIAERYDDIYCTVGIHPHEADSQPEIDTARLVEAARHPKVVGIGETGLDYFYEHSARQAQQRSFRAHIQASRETGLPLVVHTRDADEDTVAILKDEIGQGDYPGLIHCFSSSAWLAEECLKLGLYISLSGIVTFKKAEELRETVKALPLDRILVETDSPYLAPVPHRGKRNEPAFVAHTAKVVAELKGVGMAEIEARTTENFLHLFNK 255
BLAST of mRNA_P-wetherbeei_contig1676.2.1 vs. uniprot
Match: A0A1G7Y824_9PROT (TatD DNase family protein n=1 Tax=Roseospirillum parvum TaxID=83401 RepID=A0A1G7Y824_9PROT) HSP 1 Score: 358 bits (920), Expect = 1.670e-122 Identity = 166/259 (64.09%), Postives = 204/259 (78.76%), Query Frame = 1
Query: 1 PMLVDSHCHLDFPDFSGEMDNVVRRAGLAGIGMMLTICTRISEFERISDVAGKFDHIYCSVGIHPHEADNEPAADCARIVSLTGHPKVIGIGETGLDYFYEHGSRAAQKTSFRAHIAAARETGLPLIVHARDADSDTIEILQDEAGKGAFPGVIHCFTAGPELARAALDLGLYISLSGIVTFKNAKDLRETAKMIPSDRLLIETDAPFLAPMPHRGKRNEPAFVADTARYLAEFFGETREAFAARTTDNFFTLFTKADR 777
P LVDSHCHLDFPDF+ E+D VV RAG AGIG MLTICT ++ F+++ +A +FD ++CSVGIHPHEA EPA D AR++ L PKV+G GETGL+YFYEH RA Q+ +FRAHI AARETGLPLI+H+RDAD+D IL++EAG+GAFPG++HCF++GPELA AL+LGLY+S SGIVTF A+ LRE AK +P +R+L+ETDAP+LAP+P RGKRNEPAF TA LAE G AA+TT+NFFTLF K R
Sbjct: 5 PFLVDSHCHLDFPDFAEELDEVVARAGRAGIGTMLTICTHVTRFQQVRALAHRFDAVWCSVGIHPHEAGREPATDAARLIELADDPKVVGFGETGLEYFYEHSPRADQQRAFRAHIQAARETGLPLIIHSRDADADMAAILREEAGQGAFPGLVHCFSSGPELAETALELGLYLSFSGIVTFPKAEALREVAKTVPPERILVETDAPYLAPVPKRGKRNEPAFTVHTATRLAEVLGMEVADLAAQTTENFFTLFGKVQR 263
BLAST of mRNA_P-wetherbeei_contig1676.2.1 vs. uniprot
Match: A0A3B8XQ37_9HYPH (LuxR family transcriptional regulator n=5 Tax=Hyphomicrobiales TaxID=356 RepID=A0A3B8XQ37_9HYPH) HSP 1 Score: 356 bits (914), Expect = 1.460e-121 Identity = 166/256 (64.84%), Postives = 205/256 (80.08%), Query Frame = 1
Query: 1 PMLVDSHCHLDFPDFSGEMDNVVRRAGLAGIGMMLTICTRISEFERISDVAGKFDHIYCSVGIHPHEADNEPAADCARIVSLTGHPKVIGIGETGLDYFYEHGSRAAQKTSFRAHIAAARETGLPLIVHARDADSDTIEILQDEAGKGAFPGVIHCFTAGPELARAALDLGLYISLSGIVTFKNAKDLRETAKMIPSDRLLIETDAPFLAPMPHRGKRNEPAFVADTARYLAEFFGETREAFAARTTDNFFTLFTK 768
P+LVDSHCHLDFPDF E+D VV RA AG+G+M+TI T++SEF+++ VA +F H++CSVGIHPHEA++EP D A++V L HPKV+GIGETGLDY+YEH R AQ+ +FRAHIAAARETGLPLIVH RDAD DT IL +E GKGAFPG++HCF++ P+LA A++LGLYISLSGI+TFKNA +LRETA +P +RLL+ETDAP+LAP+P RGKRNEP+FV TA LAE G E A TT NF LF++
Sbjct: 4 PVLVDSHCHLDFPDFGPEVDEVVARAHGAGVGLMVTISTKVSEFDKVRAVAERFPHVFCSVGIHPHEAESEPEIDTAKLVELAKHPKVVGIGETGLDYYYEHAPREAQQRNFRAHIAAARETGLPLIVHTRDADEDTARILDEEMGKGAFPGLLHCFSSSPQLAEKAVELGLYISLSGILTFKNAVELRETAAKVPMERLLVETDAPYLAPVPKRGKRNEPSFVVHTAAKLAEVKGVPVEQLAETTTANFLRLFSR 259
BLAST of mRNA_P-wetherbeei_contig1676.2.1 vs. uniprot
Match: A0A2N3EGM8_9PROT (LuxR family transcriptional regulator n=1 Tax=Alphaproteobacteria bacterium HGW-Alphaproteobacteria-11 TaxID=2013657 RepID=A0A2N3EGM8_9PROT) HSP 1 Score: 355 bits (911), Expect = 3.630e-121 Identity = 164/255 (64.31%), Postives = 203/255 (79.61%), Query Frame = 1
Query: 4 MLVDSHCHLDFPDFSGEMDNVVRRAGLAGIGMMLTICTRISEFERISDVAGKFDHIYCSVGIHPHEADNEPAADCARIVSLTGHPKVIGIGETGLDYFYEHGSRAAQKTSFRAHIAAARETGLPLIVHARDADSDTIEILQDEAGKGAFPGVIHCFTAGPELARAALDLGLYISLSGIVTFKNAKDLRETAKMIPSDRLLIETDAPFLAPMPHRGKRNEPAFVADTARYLAEFFGETREAFAARTTDNFFTLFTK 768
ML+DSHCHLDFPDF E++ VV RA AG+G+M+TI T++SEF+R+ VA +F H++C+VGIHPHEA +EP D A +V + HPKV+GIGETGLDY+YEH RAAQ+ +FRAHIAAARETGLPL+VH RDAD DT +IL +E GKGAFPG++HCF++GP+LA AL+LGLYISLSGI+TFK A +LR TA +P DRLL+ETDAP+LAP+P RGKRNEPAFV TA LAE G + A TT NF LF++
Sbjct: 1 MLIDSHCHLDFPDFGPEVEEVVTRAHAAGVGLMVTISTKVSEFDRVRAVAERFPHVFCTVGIHPHEAASEPETDTATLVEMAKHPKVVGIGETGLDYYYEHSPRAAQQRNFRAHIAAARETGLPLVVHTRDADDDTAQILDEETGKGAFPGLLHCFSSGPQLAEKALELGLYISLSGILTFKTADELRATAAKVPLDRLLVETDAPYLAPVPKRGKRNEPAFVVHTAEKLAEVKGVSAAQLAEATTANFLRLFSR 255
BLAST of mRNA_P-wetherbeei_contig1676.2.1 vs. uniprot
Match: A0A2D4VN46_9HYPH (LuxR family transcriptional regulator n=2 Tax=Parvibaculum TaxID=256616 RepID=A0A2D4VN46_9HYPH) HSP 1 Score: 354 bits (908), Expect = 1.190e-120 Identity = 164/259 (63.32%), Postives = 205/259 (79.15%), Query Frame = 1
Query: 1 PMLVDSHCHLDFPDFSGEMDNVVRRAGLAGIGMMLTICTRISEFERISDVAGKFDHIYCSVGIHPHEADNEPAADCARIVSLTGHPKVIGIGETGLDYFYEHGSRAAQKTSFRAHIAAARETGLPLIVHARDADSDTIEILQDEAGKGAFPGVIHCFTAGPELARAALDLGLYISLSGIVTFKNAKDLRETAKMIPSDRLLIETDAPFLAPMPHRGKRNEPAFVADTARYLAEFFGETREAFAARTTDNFFTLFTKADR 777
P+LVDSHCHLDFPDF+ E+D +V RA AG+G+M+TI T+ISEFER+ VA +F H+YC+VGIHPHEA++EP AR++ L HPKV+GIGETGLD+FYEH R AQ+T+FRAHIAA+RETGLPLIVH RDAD DT IL +E KGAFPG++HCF++ +LA A+D G YISLSGI+TFK A++LRETA+ +P DRLL+ETDAP+LAP+P RGKRNEP+FV TA LAE G + A TT+NF LF++ R
Sbjct: 4 PVLVDSHCHLDFPDFAEEVDEIVNRAHEAGVGLMVTISTKISEFERVRAVAERFPHVYCTVGIHPHEAEDEPETSAARLIELAQHPKVVGIGETGLDFFYEHSPREAQETAFRAHIAASRETGLPLIVHTRDADEDTARILAEEMEKGAFPGLLHCFSSSRQLAEKAVDFGFYISLSGILTFKKAEELRETAEALPLDRLLVETDAPYLAPVPKRGKRNEPSFVVHTAAKLAEVKGVSGAELAEATTENFLKLFSRVPR 262
BLAST of mRNA_P-wetherbeei_contig1676.2.1 vs. uniprot
Match: A0A154W8C9_9PROT (LuxR family transcriptional regulator n=1 Tax=Oceanibaculum pacificum TaxID=580166 RepID=A0A154W8C9_9PROT) HSP 1 Score: 353 bits (907), Expect = 1.470e-120 Identity = 162/262 (61.83%), Postives = 208/262 (79.39%), Query Frame = 1
Query: 4 MLVDSHCHLDFPDFSGEMDNVVRRAGLAGIGMMLTICTRISEFERISDVAGKFDHIYCSVGIHPHEADNEPAADCARIVSLTGHPKVIGIGETGLDYFYEHGSRAAQKTSFRAHIAAARETGLPLIVHARDADSDTIEILQDEAGKGAFPGVIHCFTAGPELARAALDLGLYISLSGIVTFKNAKDLRETAKMIPSDRLLIETDAPFLAPMPHRGKRNEPAFVADTARYLAEFFGETREAFAARTTDNFFTLFTKADRANAR 789
MLVDSHCHLDFPDF+ E+D VV RA AG+ M+TICT+I+EFER+ +A ++D IYC+VGIHPHEAD++P D AR+V+ HPKV+GIGE+GLDYFYEH R AQ+ SFRAHI AAR+TGLPL+VH RDAD+DT+ IL++E +G FPG+IHCF++ ELA +++LGLYISLSGIVTFK A +L+ET + +P DRLL+ETD+P+LAP+PHRGKRNEPAFVA TA+ +AE G + TT+NF LF K + +A+
Sbjct: 1 MLVDSHCHLDFPDFAEELDEVVERARKAGVARMVTICTKITEFERVRGIAERYDDIYCTVGIHPHEADSQPETDAARLVAAAQHPKVVGIGESGLDYFYEHSGRLAQQRSFRAHIKAARQTGLPLVVHTRDADADTVAILREEHAEGVFPGLIHCFSSSRELAEKSIELGLYISLSGIVTFKKAVELQETVRALPLDRLLVETDSPYLAPIPHRGKRNEPAFVAHTAKMVAELKGISMAEVEKATTENFARLFKKVEMPSAQ 262
BLAST of mRNA_P-wetherbeei_contig1676.2.1 vs. uniprot
Match: A7HXT8_PARL1 (Hydrolase, TatD family n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) TaxID=402881 RepID=A7HXT8_PARL1) HSP 1 Score: 351 bits (901), Expect = 1.390e-119 Identity = 163/256 (63.67%), Postives = 202/256 (78.91%), Query Frame = 1
Query: 1 PMLVDSHCHLDFPDFSGEMDNVVRRAGLAGIGMMLTICTRISEFERISDVAGKFDHIYCSVGIHPHEADNEPAADCARIVSLTGHPKVIGIGETGLDYFYEHGSRAAQKTSFRAHIAAARETGLPLIVHARDADSDTIEILQDEAGKGAFPGVIHCFTAGPELARAALDLGLYISLSGIVTFKNAKDLRETAKMIPSDRLLIETDAPFLAPMPHRGKRNEPAFVADTARYLAEFFGETREAFAARTTDNFFTLFTK 768
P+L+DSHCHLDFPDF E++ VV RA AG+G+M+TI T++SEF+R+ VA +F H+YC+VGIHPHEA +EP D A ++ + HPKV+GIGETGLDY+YEH R AQK +FR+HIAAARETGLPLIVH RDAD D +IL +E GKGAFPG++HCF++ P+LA AL LGLYISLSGIVTFK+A++LR TA +P DRLL+ETDAP+LAP+P RGKRNEPAFV TA +AE E AA TT NF LF++
Sbjct: 4 PVLIDSHCHLDFPDFGAEVEEVVARAHEAGVGLMVTISTKVSEFDRVRAVAERFPHVYCTVGIHPHEAASEPETDKATLIEMAKHPKVVGIGETGLDYYYEHSPREAQKRNFRSHIAAARETGLPLIVHTRDADEDMAQILDEETGKGAFPGLLHCFSSSPQLAEKALALGLYISLSGIVTFKSAEELRATAATVPMDRLLVETDAPYLAPVPKRGKRNEPAFVVHTAAKVAEIKAVPVEELAAATTANFLRLFSR 259 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1676.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1676.2.1 >prot_P-wetherbeei_contig1676.2.1 ID=prot_P-wetherbeei_contig1676.2.1|Name=mRNA_P-wetherbeei_contig1676.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=264bp MLVDSHCHLDFPDFSGEMDNVVRRAGLAGIGMMLTICTRISEFERISDVAback to top mRNA from alignment at P-wetherbeei_contig1676:1776..2570- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1676.2.1 ID=mRNA_P-wetherbeei_contig1676.2.1|Name=mRNA_P-wetherbeei_contig1676.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=795bp|location=Sequence derived from alignment at P-wetherbeei_contig1676:1776..2570- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1676:1776..2570- >mRNA_P-wetherbeei_contig1676.2.1 ID=mRNA_P-wetherbeei_contig1676.2.1|Name=mRNA_P-wetherbeei_contig1676.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=792bp|location=Sequence derived from alignment at P-wetherbeei_contig1676:1776..2570- (Phaeothamnion wetherbeei SAG_119_79)back to top |