mRNA_P-wetherbeei_contig16759.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig16759.1.1 vs. uniprot
Match: A0A258JI75_9BRAD (Uncharacterized protein (Fragment) n=1 Tax=Bradyrhizobium sp. 35-63-5 TaxID=1970326 RepID=A0A258JI75_9BRAD) HSP 1 Score: 404 bits (1039), Expect = 8.010e-137 Identity = 215/318 (67.61%), Postives = 248/318 (77.99%), Query Frame = 1
Query: 28 AGVSRARARRKFSASRLIVLLALLAMGATLVSAGVGYGLAQQSDERLWSEQRASLRNAIAEFRNLFGQTREVDPRFVRMVEQSARLQSLKFEVEPSVGDREMQPVLDAQGRIAGFFTWEKTRPMAGAMDRLMPFIAGLAMALIGFAGFSLAQLRRAGRDLALSEEQARRAADEDKLTGLPNHAKTLELLDLFLAEHAAHETTTFVLIELDGMEDVTAHLGVLGSDELIVAVASRIREAVPAEAMVGRVGSDEFAVMLIAEDEIDVEPTIRAVLDNIARPHWFNTVVRVSGHAGFAQAPRHATTRGELTRRTELALRAA 981
AG +R RRKFSASRLIV LA+ AM ATL+ AG GY LA +SDERLW EQR +LRN ++EFR LFG ++DPRFVR+VEQSARLQ L+FE EP+ REMQPV+D QGRI GFFTW+KT PM AM RLMPFI A AL GFAG SL QLRRA RDLA SE+ A+RAAD DKLTGLPNHAK LELLDL+LAE E TTF +IELDG+EDVTA+LGVLGSDEL++AVA R+R+ +PA A+ GR+GSDEFAV+L A+ ID E I + ++ IARPHWF+TVVRVS HAGFAQAP HATTRG ALRAA
Sbjct: 12 AGSQFSRVRRKFSASRLIVGLAVAAMAATLICAGFGYSLANRSDERLWREQRVALRNTVSEFRTLFGADNKLDPRFVRVVEQSARLQGLRFETEPAQSAREMQPVVDGQGRIVGFFTWDKTWPMTVAMGRLMPFIVAAAFALAGFAGISLWQLRRAARDLAASEDLAQRAADADKLTGLPNHAKILELLDLYLAERGGDEVTTFAVIELDGIEDVTANLGVLGSDELMIAVADRLRQTLPAGAICGRIGSDEFAVLLTADGSIDAEAMIVSAVETIARPHWFDTVVRVSAHAGFAQAPGHATTRGXXXXXXXXALRAA 329
BLAST of mRNA_P-wetherbeei_contig16759.1.1 vs. uniprot
Match: A0A371BCY1_9HYPH (GGDEF domain-containing protein n=2 Tax=Pseudolabrys sp. GY_H TaxID=2292256 RepID=A0A371BCY1_9HYPH) HSP 1 Score: 392 bits (1008), Expect = 8.010e-130 Identity = 209/320 (65.31%), Postives = 248/320 (77.50%), Query Frame = 1
Query: 22 AAAGVSRARARRKFSASRLIVLLALLAMGATLVSAGVGYGLAQQSDERLWSEQRASLRNAIAEFRNLFGQTREVDPRFVRMVEQSARLQSLKFEVEPSVGDREMQPVLDAQGRIAGFFTWEKTRPMAGAMDRLMPFIAGLAMALIGFAGFSLAQLRRAGRDLALSEEQARRAADEDKLTGLPNHAKTLELLDLFLAEHAAHETTTFVLIELDGMEDVTAHLGVLGSDELIVAVASRIREAVPAEAMVGRVGSDEFAVMLIAEDEIDVEPTIRAVLDNIARPHWFNTVVRVSGHAGFAQAPRHATTRGELTRRTELALRAA 981
AA RA AR S+SR+IVLLAL+ + AT+VS GVGY +A+ DE L EQR +LRNA+AEFR LFG RE+DPRFVRMVEQSARL++L+FEV P+ RE+QPVLD +GRI GFFTW++T PMA +MPF+A LAMAL GFAGFS+ LRRA R+L+ SE ARRAAD DK+TGLPNHAK LELLDL LAE ETTTF + E+DG+ D+TA+ GVLGSDELI+A+A RIREA P A+ R+GSDEFA++L A D D+ I +V++N ARPHWF TVVRVS HAGFAQAP HA TRGELTRR ELALRAA
Sbjct: 11 AAQTADRAPARASLSSSRMIVLLALVVLLATMVSTGVGYQVARHQDETLAMEQRTALRNAVAEFRALFGHEREIDPRFVRMVEQSARLKNLQFEVAPADDGREIQPVLDTEGRITGFFTWQRTSPMAATAKAVMPFVAALAMALAGFAGFSVWHLRRASRELSESEALARRAADVDKITGLPNHAKMLELLDLALAERMPGETTTFAVFEIDGIADITANFGVLGSDELIIALADRIREATPDGAVCARIGSDEFAMLLTAPDATDIGKIIASVIENFARPHWFETVVRVSAHAGFAQAPHHAATRGELTRRAELALRAA 330
BLAST of mRNA_P-wetherbeei_contig16759.1.1 vs. uniprot
Match: UPI00197E9B08 (bifunctional diguanylate cyclase/phosphodiesterase n=1 Tax=Pseudolabrys sp. FHR47 TaxID=2562284 RepID=UPI00197E9B08) HSP 1 Score: 377 bits (967), Expect = 4.680e-124 Identity = 200/302 (66.23%), Postives = 237/302 (78.48%), Query Frame = 1
Query: 76 LIVLLALLAMGATLVSAGVGYGLAQQSDERLWSEQRASLRNAIAEFRNLFGQTREVDPRFVRMVEQSARLQSLKFEVEPSVGDREMQPVLDAQGRIAGFFTWEKTRPMAGAMDRLMPFIAGLAMALIGFAGFSLAQLRRAGRDLALSEEQARRAADEDKLTGLPNHAKTLELLDLFLAEHAAHETTTFVLIELDGMEDVTAHLGVLGSDELIVAVASRIREAVPAEAMVGRVGSDEFAVMLIAEDEIDVEPTIRAVLDNIARPHWFNTVVRVSGHAGFAQAPRHATTRGELTRRTELALRAA 981
+IV+LAL+A+ AT+VS GVGY +A+ DE EQRA+LRNA+AEFR LF Q E+DPRFVRMVEQSARL+ LKFEV P RE+QPV+DA GRIAGFFTW+++ PMA +MPF+A LAMALIGFAGFS+ LRRA RDL SE ARRAAD DK+TGLPNHAK LELLDL LAE ETT F + E+DGM DV A+ GVLGSDELI+A+A RIREA P A+ R+GSDEFA++L ++ D+ + AV++NIARPHWF+TVVRVS HAGFA+AP HA TRGELTRR ELALRAA
Sbjct: 1 MIVILALVAVIATMVSTGVGYQIARNHDEAQLQEQRAALRNAVAEFRALFEQAGEIDPRFVRMVEQSARLKDLKFEVAPIDDGREIQPVVDAGGRIAGFFTWQRSVPMAETAKAIMPFVAVLAMALIGFAGFSVWHLRRASRDLIESEALARRAADMDKITGLPNHAKLLELLDLALAERMNDETTVFAVFEIDGMADVAANFGVLGSDELIIALAGRIREAAPEGAVCARIGSDEFAMLLTTPNDTDIGKIVAAVIENIARPHWFDTVVRVSAHAGFAKAPHHAATRGELTRRAELALRAA 302
BLAST of mRNA_P-wetherbeei_contig16759.1.1 vs. uniprot
Match: A0A0Q7TZX0_9HYPH (Uncharacterized protein n=2 Tax=Pseudolabrys sp. Root1462 TaxID=1736466 RepID=A0A0Q7TZX0_9HYPH) HSP 1 Score: 376 bits (965), Expect = 1.730e-123 Identity = 197/310 (63.55%), Postives = 236/310 (76.13%), Query Frame = 1
Query: 52 RRKFSASRLIVLLALLAMGATLVSAGVGYGLAQQSDERLWSEQRASLRNAIAEFRNLFGQTREVDPRFVRMVEQSARLQSLKFEVEPSVGDREMQPVLDAQGRIAGFFTWEKTRPMAGAMDRLMPFIAGLAMALIGFAGFSLAQLRRAGRDLALSEEQARRAADEDKLTGLPNHAKTLELLDLFLAEHAAHETTTFVLIELDGMEDVTAHLGVLGSDELIVAVASRIREAVPAEAMVGRVGSDEFAVMLIAEDEIDVEPTIRAVLDNIARPHWFNTVVRVSGHAGFAQAPRHATTRGELTRRTELALRAA 981
RR SA R +VLLALL +G LVS VGY +A+ SDE LW+EQR +LRNA +E R +F R++D RFVRM+E SARL LKFE+ PS RE+QPV+D GRIAGFFTW++T P AM LMP+IA L + LI FA +SL L A RDL+ +E A+RAAD+DKLTG+PNHAK +ELLDL LAE ETT+FV+ ELDGM DVTA+ GVLGSDELI+AVA RIREA P EA+ GR+GSDEFA+++ D +DV+ + AVL++IARPHW TVVRVS HAGFAQAP HA TRGELTRR ELALRAA
Sbjct: 14 RRWLSAPRGVVLLALLTLGVALVSTAVGYEIARHSDENLWAEQRTALRNATSEIRTMFAHGRDIDQRFVRMIENSARLPDLKFELAPSDDGREVQPVIDGDGRIAGFFTWQRTAPTTAAMGALMPYIAALMIVLIAFAIYSLWHLGLAARDLSETEALAQRAADQDKLTGMPNHAKMVELLDLALAEREPGETTSFVVFELDGMADVTANFGVLGSDELIIAVADRIREAAPPEAICGRIGSDEFAMLMTTADNVDVDAMVAAVLESIARPHWLETVVRVSAHAGFAQAPHHAATRGELTRRAELALRAA 323
BLAST of mRNA_P-wetherbeei_contig16759.1.1 vs. uniprot
Match: A0A345ZTU8_9HYPH (GGDEF domain-containing protein n=2 Tax=Pseudolabrys taiwanensis TaxID=331696 RepID=A0A345ZTU8_9HYPH) HSP 1 Score: 353 bits (907), Expect = 3.340e-115 Identity = 189/293 (64.51%), Postives = 225/293 (76.79%), Query Frame = 1
Query: 103 MGATLVSAGVGYGLAQQSDERLWSEQRASLRNAIAEFRNLFGQTREVDPRFVRMVEQSARLQSLKFEVEPSVGDREMQPVLDAQGRIAGFFTWEKTRPMAGAMDRLMPFIAGLAMALIGFAGFSLAQLRRAGRDLALSEEQARRAADEDKLTGLPNHAKTLELLDLFLAEHAAHETTTFVLIELDGMEDVTAHLGVLGSDELIVAVASRIREAVPAEAMVGRVGSDEFAVMLIAEDEIDVEPTIRAVLDNIARPHWFNTVVRVSGHAGFAQAPRHATTRGELTRRTELALRAA 981
MGA ++AG YG A+QSD+RL +EQRASLR A AEFR +FGQ E+DPRFVRMVEQ A ++ LKFE +P G E QPV+D QGRIAGFFTW+++RPM M+RLMP I + + L+ FAG + QL RA R LA+SEE ARRA D DKLTGLPNHAKTLELLDL LAE E TTF LI+LDGMED+TAHLGVLGSDELI AVA R+++++P +A GR+GS+EFAV L A + ID E +R L+ + RPHW +TVVRVS HAGFAQAP HA TRGEL RR ELA+RAA
Sbjct: 1 MGAVAMAAG--YGFARQSDDRLLAEQRASLRAATAEFRAVFGQGGEIDPRFVRMVEQGAGIRGLKFESDPPPGPFESQPVMDTQGRIAGFFTWQRSRPMTQMMNRLMPGIGAITLLLLTFAGVFMFQLVRARRALAVSEEVARRAGDVDKLTGLPNHAKTLELLDLALAEREEGEVTTFALIQLDGMEDITAHLGVLGSDELIDAVAKRLKDSLPPQATCGRIGSNEFAVALTAAEVIDAEYIVRGALEAVMRPHWIDTVVRVSAHAGFAQAPAHAGTRGELVRRAELAVRAA 291
BLAST of mRNA_P-wetherbeei_contig16759.1.1 vs. uniprot
Match: A0A537MQS3_9PROT (EAL domain-containing protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537MQS3_9PROT) HSP 1 Score: 218 bits (554), Expect = 4.390e-62 Identity = 117/280 (41.79%), Postives = 177/280 (63.21%), Query Frame = 1
Query: 142 LAQQSDERLWSEQRASLRNAIAEFRNLFGQTREVDPRFVRMVEQSARLQSLKFEVEPSVGDREMQPVLDAQGRIAGFFTWEKTRPMAGAMDRLMPFIAGLAMALIGFAGFSLAQLRRAGRDLALSEEQARRAADEDKLTGLPNHAKTLELLDLFLAEHAAHETTTFVLIELDGMEDVTAHLGVLGSDELIVAVASRIREAVPAEAMVGRVGSDEFAVMLIAEDEIDVEPTIRAVLDNIARPHWFNTVVRVSGHAGFAQAPRHATTRGELTRRTELALRAA 981
LA+Q+D+ L +E R +L A+ + + +V+P+ +R++E+++ L+ L+FE EP+ R++Q +LDA+GRI G+F+WE RP M+RL+P A +A LIGFA ++ QL R G LA SE+ A++ +D LTGLP+H E+LD LA A ET F +++LDG ++V LG G DE++ + R+ ++ A A +GR+GSDEFA+++ D+ + A+ ++ARP W N VV+VS G APR TTR ELTRR +LALR A
Sbjct: 64 LARQADDFLEAEHRQALAGAVEALQAVSPDLAQVEPKLIRVLERASGLKELRFETEPAGSARQVQSMLDAKGRIVGWFSWEAERPATAMMNRLLPLAASIAAGLIGFAALAMWQLGRLGFQLARSEQHAQKLESQDTLTGLPSHNHFFEVLDRALARRQADETLAFAVLDLDGFDEVNDALGYAGGDEVLGEMGKRLAHSLCAGATIGRLGSDEFALLIDDVDQDEALAAAEALGKSLARPFWINQVVQVSVSMGVTMAPRDGTTRDELTRRADLALRTA 343
BLAST of mRNA_P-wetherbeei_contig16759.1.1 vs. uniprot
Match: A0A127EYX1_9HYPH (Diguanylate cyclase n=1 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A127EYX1_9HYPH) HSP 1 Score: 209 bits (533), Expect = 2.430e-59 Identity = 126/310 (40.65%), Postives = 176/310 (56.77%), Query Frame = 1
Query: 55 RKFSASRLIVLLALLAMGATLVSAGVGYGLAQQSDERLWSEQRASLRNAIAEFRNLFGQTREVDPRFVRMVEQSARLQSLKFEVEPSVGDREMQPVLDAQGRIAGFFTWEKTRPMAGAMDRLMPFIAGLAMALIGFAGFSLAQLRRAGRDLALSEEQARRAADEDKLTGLPNHAKTLELLDLFLAEHAAHETTTFVLIELDGMEDVTAHLGVLGSDELIVAVASRIREAVPAEAMVGRVGSDEFAVMLIAEDEIDVEPTIRAVLDNIARPHWFN-TVVRVSGHAGFAQAPRHATTRGELTRRTELALRAA 981
R+ RL+ LAL + A VG L Q+DE+ E+R +L AI + RN ++DPR ++ +E++A L+ L+FE EP +RE+Q VLDA GRI G+F+W M+ A+ L P A A+ L+GFAG + Q+RR RDL SE A + A ED LTGLPNH K +EL+D LA+ E T ++LDG++DV LG D+L+ +A R++E +P + GR DEFAV + A D E I A++ +ARP+W + +V AG A P R EL RR +LALR A
Sbjct: 13 RRLWTPRLVATLALFVVSAAFFCGIVGNALVHQADEQQGVERRGALLGAIEDLRNSGADFYKLDPRRIQAIERTAGLKDLRFENEPVEDEREVQSVLDAHGRIVGWFSWVPNNTMSDALGELRPLAALTAIFLVGFAGLAFWQIRRTVRDLGKSERLAWQLAHEDMLTGLPNHRKMIELIDAMLAKRHHGEVVTLAFLDLDGLKDVNDALGHSIGDDLLRGIAMRLKEKLPGHGVCGRYDGDEFAVAMRAPDMEVAEKGIGALVAELARPYWIDGQAAQVGVTAGLAHVPSDGRNREELMRRADLALREA 322
BLAST of mRNA_P-wetherbeei_contig16759.1.1 vs. uniprot
Match: A0A6L5FIJ6_9HYPH (EAL domain-containing protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6L5FIJ6_9HYPH) HSP 1 Score: 158 bits (399), Expect = 5.960e-40 Identity = 111/305 (36.39%), Postives = 166/305 (54.43%), Query Frame = 1
Query: 73 RLIVLLALLAMGATLVSAGVGYGLAQQSDERLWSEQRASLRNAIAEFRNLFGQTREVDPRFVRMVEQSARLQSLKFEVEPSVGDREMQPVLDAQGRIAGFFTWEKTRPMAGAMDRLMPFIAGLAMALIGFAGFSLAQLRRAGRDLALSEEQARRAADEDKLTGLPNHAKTLELLDLFLAEHAAHETTTFVLIELDGMEDVTAHLGVLGSDELIVAVASRIREAVPAEAMVGRVGSDEFAVMLIAEDEIDVEPTI-RAVLDNIARPHWFN-TVVRVSGHAGFAQAPRHATTRGELTRRTELALRAA 981
R + L L+ + A ++ VGY LA+QSD++ +R +L AI EFR G D R VR++EQ++ L+ L+F+ P R++QPV++ GRI G+F+W++ P+ + RL P + L GF G +L LRR+GR LA + AR E TGLPN + +L+ L + T++LI++D +D LG +DE++ VA R++ A+P A +G G FA +LI +ID +A L +A V+R G GFA AP H T R ++ RR ELAL+AA
Sbjct: 49 RAMAPLGLVLVAAAMLCGVVGYDLARQSDDQHDVARRQALVAAIKEFRAESGGDAAFDQRVVRLLEQASGLKGLRFDSGPGGRARDLQPVVE-NGRIVGWFSWDRDAPVTDVVTRLWPLVMLGIFCLSGFIGLTLWHLRRSGRALAETRAHARTLVTESH-TGLPNTSLIHHVLERALIGRRPRQVVTYLLIDIDRFDD--GALGHQATDEILTTVALRLKAALPGSATLGSFGGGRFAAVLIG-GQIDAGVAAGQAALAALAESLTVRGEVLRFGGCVGFASAPEHGTERDDIARRAELALKAA 348
BLAST of mRNA_P-wetherbeei_contig16759.1.1 vs. uniprot
Match: UPI00178375B0 (bifunctional diguanylate cyclase/phosphodiesterase n=2 Tax=Roseibium polysiphoniae TaxID=2571221 RepID=UPI00178375B0) HSP 1 Score: 99.4 bits (246), Expect = 2.560e-19 Identity = 70/210 (33.33%), Postives = 105/210 (50.00%), Query Frame = 1
Query: 352 QGRIAGFFTWEKTRPMAGAMDRLMPFIAGLAMALIGFAGFSLAQLRRAGRDLALSEEQARRAADEDKLTGLPNHAKTLELLDLFLAEHAAHET-TTFVLIELDGMEDVTAHLGVLGSDELIVAVASRIREAVPAEAMVGRVGSDEFAVMLI-AEDEIDVEPTIRAVLDNIARPHWF-NTVVRVSGHAGFAQAPRHATTRGELTRRTELAL 972
+G + G W +P + R+ P + LA+A++G + R+ R LA S+ QA A D L+GLPN + LL L + + V I+LD +D+ LG DE+I AVA R++ P ++ R+ DEFA++L E++ VE + V D + RP N + VS G A APR T GEL R+ ++AL
Sbjct: 256 KGVVIGNLQWRPNKPGTDMLGRVAPVLLILALAIVGLTIGVIDFTRQTTRRLASSQAQAVHTASHDSLSGLPNREQFSTLLSEALKKTQDEAVGSAIVYIDLDRFKDINDTLGHAAGDEVIRAVAGRLKAIAPKTGVIARISGDEFAMLLADCENQQSVEQILTRVQDQMVRPIRIDNNELFVSLSMGAALAPRDGTDPGELLRKADIAL 465
BLAST of mRNA_P-wetherbeei_contig16759.1.1 vs. uniprot
Match: UPI00156D84FD (EAL domain-containing protein n=1 Tax=Chelativorans sp. Marseille-P2723 TaxID=2709133 RepID=UPI00156D84FD) HSP 1 Score: 97.8 bits (242), Expect = 8.260e-19 Identity = 75/218 (34.40%), Postives = 112/218 (51.38%), Query Frame = 1
Query: 340 VLDAQGRIAGFFTWEKTRPMAGAMDRLMPFIAGLAMALIGFAGFSLAQ-LRRAGRDLALSEEQARRAADEDKLTGLPNHAKTLELLDLFL-AEHAAHETTTFVLIELDGMEDVTAHLGVLGSDELIVAVASRIREAVPAEAMVGRVGSDEFAVMLIAEDEIDVEPTIRAVLDNIA----RPHWF-NTVVRVSGHAGFAQAPRHATTRGELTRRTELAL 972
+ GR G+F W RP + ++ P+ AGLA+A+ GF LA+ LRRA R+L +SE +AR A D LTGLPN LD L A + ++LD + V LG D+L+ A+R++E V ++ R+G DEFAV++ +D+ E +++ D + +P + VV V G A AP RGEL R+ ++AL
Sbjct: 234 IASRDGRTIGYFAWTPDRPGLRLVRQVAPW-AGLALAITLGVGFHLARNLRRASRELHVSEVRARHLAFHDALTGLPNRVLFENHLDRELRAVEGGEGQAALLFLDLDRFKTVNDTLGHRAGDQLMFQAAARLKETVGQNGIIARMGGDEFAVLI--KDQY-AEEAAKSLSDRLLAVFNQPFQLEDDVVHVGLSLGIAVAPEAGIRRGELLRKADIAL 447 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16759.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig16759.1.1 >prot_P-wetherbeei_contig16759.1.1 ID=prot_P-wetherbeei_contig16759.1.1|Name=mRNA_P-wetherbeei_contig16759.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=327bp GRRRKHAAAAGVSRARARRKFSASRLIVLLALLAMGATLVSAGVGYGLAQback to top mRNA from alignment at P-wetherbeei_contig16759:1..981- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig16759.1.1 ID=mRNA_P-wetherbeei_contig16759.1.1|Name=mRNA_P-wetherbeei_contig16759.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=981bp|location=Sequence derived from alignment at P-wetherbeei_contig16759:1..981- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig16759:1..981- >mRNA_P-wetherbeei_contig16759.1.1 ID=mRNA_P-wetherbeei_contig16759.1.1|Name=mRNA_P-wetherbeei_contig16759.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=981bp|location=Sequence derived from alignment at P-wetherbeei_contig16759:1..981- (Phaeothamnion wetherbeei SAG_119_79)back to top |