mRNA_P-wetherbeei_contig16716.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig16716.1.1
Unique NamemRNA_P-wetherbeei_contig16716.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig16716.1.1 vs. uniprot
Match: A0A7X9KK87_9ACTN (Carbohydrate ABC transporter substrate-binding protein n=2 Tax=Actinobacteria TaxID=201174 RepID=A0A7X9KK87_9ACTN)

HSP 1 Score: 564 bits (1454), Expect = 2.390e-197
Identity = 311/456 (68.20%), Postives = 350/456 (76.75%), Query Frame = 1
Query:    1 VSGKYEMSPSPSEIGFSIFSRRTLLAGAASVL---VLAACGSDDKKSNGTT----APGXXXXXXXXXXXXXDVG--TVTFGSNYS-DEKPKSALAAALAATGVTATINTVDHNTYQDNITNYLAQPDDVMCWFSGYRMRFFADKGLVGDISDVWGDLPDIADSFKTASTGNDGKQYFVPFYYYPWAVHYRKSVFEEKGYTVPTTRDELLALAGKMQDDGLVPFAYANDGKWPVMGTFDILNMRINGYQYHVDLLAGKESWTDDKTKAVFTEWAALLPFHQENPNGRTWQEAATALEKKEAGMYFLGTFVATNSTDQAYLDDLDFFAFPALSDEHGQDAIDAPIDGFMMAAKPKNEDGAKALLGGLGGAPAIDAFLAIEGASVAVNTKASTAGYSKIQAKSAELVSGSKFIAQFLDRDTSPDFVSNVVADAFASFIADPSQADTILKGIEEQKSTYL 1338
            VS  YE SPSPS++GF+I SRR L+ G A+V    +LAACGSDDK S  TT    A G  XXXXXXXXXXX      VT G N +          A L ATGV  T N VDHN++QDNIT+YL QPDDV  WF+GYRMRFFA+KGL GDIS VW +LPD  + FKTA+TGNDGKQY VP  YYPWAVHYRKS+FEEKGYTVPT +DELLALA +MQ DGLVPFAYANDGKWPV GTFDILNMR+NGYQ+HVDLLAGKE WT DK KAVF  W  LLPFHQENPNGRTWQEAATALE KEAGMY+LGTFV++NSTDQ YLDDLDFF FP L    G DA+DAPIDGFMMAA PKNEDGAKA+L  +GG   I A  A+  ++V  N+K  ++ ++ IQ KSAELV  +K IAQFLDRDTSPDFVSNV++DAFA+F ADPS  D+IL  IE QKS YL
Sbjct:   25 VSEGYEQSPSPSDVGFNIVSRRGLIIGTAAVAGAGLLAACGSDDKDSGSTTPATDAAGTDXXXXXXXXXXXXXXGDAVTVGINEAAGSVAYDGAKAGLDATGVPYTGNFVDHNSFQDNITSYLQQPDDVFTWFAGYRMRFFAEKGLAGDISSVWDNLPDFTEGFKTAATGNDGKQYLVPTSYYPWAVHYRKSLFEEKGYTVPTNKDELLALAAQMQADGLVPFAYANDGKWPVQGTFDILNMRLNGYQFHVDLLAGKEDWTGDKVKAVFALWTDLLPFHQENPNGRTWQEAATALESKEAGMYYLGTFVSSNSTDQEYLDDLDFFNFPELDPAIGADALDAPIDGFMMAASPKNEDGAKAMLTAIGGLDFITAANAVNPSAVPANSKFDSSVFTPIQKKSAELVGAAKNIAQFLDRDTSPDFVSNVISDAFANFHADPSTIDSILDDIETQKSQYL 480          
BLAST of mRNA_P-wetherbeei_contig16716.1.1 vs. uniprot
Match: A0A3C2B3Z6_9ACTN (Sugar ABC transporter substrate-binding protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3C2B3Z6_9ACTN)

HSP 1 Score: 518 bits (1334), Expect = 5.700e-180
Identity = 247/382 (64.66%), Postives = 297/382 (77.75%), Query Frame = 1
Query:  199 GTVTFGSNYSDEKPKSALAAALAATGVTATINTVDHNTYQDNITNYLAQPDDVMCWFSGYRMRFFADKGLVGDISDVWGDLPDIADSFKTASTGNDGKQYFVPFYYYPWAVHYRKSVFEEKGYTVPTTRDELLALAGKMQDDGLVPFAYANDGKWPVMGTFDILNMRINGYQYHVDLLAGKESWTDDKTKAVFTEWAALLPFHQENPNGRTWQEAATALEKKEAGMYFLGTFVATN---STDQAYLDDLDFFAFPALSDEHGQDAIDAPIDGFMMAAKPKNEDGAKALLGGLGGAPAIDAFLAIEGASVAVNTKASTAGYSKIQAKSAELVSGSKFIAQFLDRDTSPDFVSNVVADAFASFIADPSQADTILKGIEEQKSTY 1335
            G VTFGSNYSDEKPK+A+ AA+ + G+   +NTVDHNTYQ+N   Y+ QPDDVMCWF+GYRMR FA KG++GDISDVWG+LPD+++ FK A+TG DGKQYFVPFY+YPWA+HYRKS+FEEKGY +P    ELL L  KM  DG+ PFA ANDG WP MG FD++N+R NGY +HV L+ GKESWTDDK K VFT W  +L ++Q + NGRTWQ+AATAL  KEAGMY LGTFV +N    T Q  +DD+DFFAFP +   HG+DA++APIDGFMMA  PKNE GAKALL  LGGA AIDAFLA++ +SVA N+KA T GY+ +Q KSAELV  +K+IAQFLDRDT PDF + VV  A   F+ADPS  DT+L  +EEQK TY
Sbjct:   41 GEVTFGSNYSDEKPKAAMQAAIDSAGLNVKVNTVDHNTYQENFNTYVQQPDDVMCWFAGYRMRAFAGKGVLGDISDVWGNLPDMSEGFKNAATGLDGKQYFVPFYFYPWAIHYRKSLFEEKGYAIPNNWAELLELCEKMVADGITPFAAANDGGWPQMGMFDMINLRTNGYDFHVSLMGGKESWTDDKVKQVFTNWGTILDYYQPDVNGRTWQDAATALGNKEAGMYLLGTFVTSNFDAETQQDIIDDIDFFAFPIIDPVHGKDAVEAPIDGFMMAKSPKNEAGAKALLTALGGAAAIDAFLAVDPSSVAANSKAKTDGYNALQQKSAELVGSAKYIAQFLDRDTDPDFAAKVVGKAIQDFLADPSSIDTVLSTVEEQKQTY 422          
BLAST of mRNA_P-wetherbeei_contig16716.1.1 vs. uniprot
Match: A0A539E0J4_9ACTN (Multiple sugar transport system substrate-binding protein (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A539E0J4_9ACTN)

HSP 1 Score: 508 bits (1308), Expect = 2.670e-176
Identity = 244/383 (63.71%), Postives = 299/383 (78.07%), Query Frame = 1
Query:  205 VTFGSNYSDEKPKSALAAALAATGVTATINTVDHNTYQDNITNYLAQPDDVMCWFSGYRMRFFADKGLVGDISDVWGDLPDIADSFKTASTGNDGKQYFVPFYYYPWAVHYRKSVFEEKGYTVPTTRDELLALAGKMQDDGLVPFAYANDGKWPVMGTFDILNMRINGYQYHVDLLAGKESWTDDKTKAVFTEWAALLPFHQENPNGRTWQEAATALEKKEAGMYFLGTFVATNSTD------QAYLDDLDFFAFPALSDEHGQDAIDAPIDGFMMAAKPKNEDGAKALLGGLGGAPAIDAFLAIEGASVAVNTKASTAGYSKIQAKSAELVSGSKFIAQFLDRDTSPDFVSNVVADAFASFIADPSQADTILKGIEEQKSTY 1335
            VTFGSNYSDEKPK+A+AAA+A +G+  TINTVDHN+YQ+N   Y+ QPDDV+ WF+GYRMR FA KG+VGDISDVW  LPD+++ FK+AS+G DGKQYFVP Y+YPWA+HYRKS+FEE GY VPTT DELLAL   M  DGL+PFA AN G WP MG FD++N+R NGY +HV L+ GKESWTDDK K +FT W+ +L ++Q + NGR WQ+AATAL KKE GMY LGTFV +N         QA +DD+DFFAFP +   HGQDA++APIDGFMMAA PKNE GAKALL  +G A AIDA++A++ + VA N+KAST+GY+ +Q KSAELV  +K+IAQFLDRDT PDF S VV    + F+++P+  DTIL  IEEQK TY
Sbjct:   22 VTFGSNYSDEKPKAAIAAAVATSGLEVTINTVDHNSYQENFNTYIQQPDDVVSWFAGYRMRAFAGKGVVGDISDVWAGLPDMSEGFKSASSGLDGKQYFVPLYFYPWAIHYRKSLFEENGYAVPTTWDELLALCETMTADGLIPFAAANGGGWPQMGMFDMINLRTNGYDFHVSLMGGKESWTDDKVKQIFTNWSTILDYYQPDANGREWQDAATALGKKEVGMYLLGTFVTSNFDPAKDPEAQAIIDDIDFFAFPEIDPAHGQDAVEAPIDGFMMAASPKNEAGAKALLTAMGQAAAIDAYIAVDPSVVAANSKASTSGYNALQQKSAELVGSAKYIAQFLDRDTDPDFASQVVGKGLSDFLSNPADIDTILSTIEEQKQTY 404          
BLAST of mRNA_P-wetherbeei_contig16716.1.1 vs. uniprot
Match: A0A2G6K8P2_9ACTN (Sugar ABC transporter substrate-binding protein n=1 Tax=Ilumatobacter coccineus TaxID=467094 RepID=A0A2G6K8P2_9ACTN)

HSP 1 Score: 506 bits (1302), Expect = 1.020e-174
Identity = 257/448 (57.37%), Postives = 321/448 (71.65%), Query Frame = 1
Query:    1 VSGKYEMSPSPSEIGFSIFSRRTLLAGAASVLVLAACGSDDKKSNGTTAPGXXXXXXXXXXXXXDVGTVTFGSNYSDEKPKSALAAALAATGVTATINTVDHNTYQDNITNYLAQPDDVMCWFSGYRMRFFADKGLVGDISDVWGDLPDIADSFKTASTGNDGKQYFVPFYYYPWAVHYRKSVFEEKGYTVPTTRDELLALAGKMQDDGLVPFAYANDGKWPVMGTFDILNMRINGYQYHVDLLAGKESWTDDKTKAVFTEWAALLPFHQENPNGRTWQEAATALEKKEAGMYFLGTFVATN---STDQAYLDDLDFFAFPALSDEHGQDAIDAPIDGFMMAAKPKNEDGAKALLGGLGGAPAIDAFLAIEGASVAVNTKASTAGYSKIQAKSAELVSGSKFIAQFLDRDTSPDFVSNVVADAFASFIADPSQADTILKGIEEQKSTY 1335
            ++G+ E SPSPSE+GF++  R  LLA                         XXXXXXX      D+G VTFGSNYSD K   A+AAA+  TG+   INTVDHN+YQ+N   Y+ QPDDV+CWF+GYRMR FA KG+VGD+SDVWG++  +++ FK AST  DGKQYFVPFY+YPWAVHYRKS+FEEKGY VPTT DEL+ALA KM+ DG++PFA ANDG WP MG FD++NMR NGY +HV L+ GKESWTD++   VF  W  LLP++Q + NGRTWQ+AATAL  KE GM+ LGTF+ +N    T    +DD+ FF+FP +   +GQDA++APIDGFMMA  PKNE GAKALLGG+  A AIDAF+AI+ + VA +  A T+GY+ +Q KSAELV  +K+I+QFLDRDT PDF SNVV      F++DPS   T+++ IEEQK TY
Sbjct:    1 MTGQPERSPSPSEVGFALNRRTFLLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSEEMSDLGEVTFGSNYSDPKQVEAIAAAVGTTGLDVKINTVDHNSYQENFNTYIQQPDDVLCWFAGYRMRAFAGKGVVGDLSDVWGEIEGMSEGFKNASTALDGKQYFVPFYFYPWAVHYRKSLFEEKGYEVPTTWDELMALAAKMESDGIIPFAAANDGGWPQMGMFDMINMRTNGYDFHVSLMGGKESWTDERVAKVFEHWTELLPYYQPDVNGRTWQDAATALGNKEVGMFLLGTFITSNFDNETQADIIDDITFFSFPEIDPAYGQDAVEAPIDGFMMAKSPKNEAGAKALLGGMAKAAAIDAFIAIDPSVVAASADADTSGYNPLQQKSAELVGSAKYISQFLDRDTDPDFASNVVGKGLQDFLSDPSNVATVMQTIEEQKQTY 448          
BLAST of mRNA_P-wetherbeei_contig16716.1.1 vs. uniprot
Match: A0A524ND14_9ACTN (Carbohydrate ABC transporter substrate-binding protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A524ND14_9ACTN)

HSP 1 Score: 493 bits (1268), Expect = 1.230e-169
Identity = 258/441 (58.50%), Postives = 323/441 (73.24%), Query Frame = 1
Query:   37 EIGFSIFSRRTLLAGAASVL----VLAACGSDDKKSNGTTAPGXXXXXXXXXXXXXDVGTVTFGSNYSDEKPKSALAAALAATGVTATINTVDHNTYQDNITNYLAQPDDVMCWFSGYRMRFFADKGLVGDISDVWGD-LPDIADSFKTASTGNDGKQYFVPFYYYPWAVHYRKSVFEEKGYTVPTTRDELLALAGKMQDDGLVPFAYANDGKWPVMGTFDILNMRINGYQYHVDLLAGKESWTDDKTKAVFTEWAALLPFHQENPNGRTWQEAATALEKKEAGMYFLGTFVATN---STDQAYLDDLDFFAFPALSDEHGQDAIDAPIDGFMMAAKPKNEDGAKALLGGLGGAPAIDAFLAIEGASVAVNTKASTAGYSKIQAKSAELVSGSKFIAQFLDRDTSPDFVSNVVADAFASFIADPSQADTILKGIEEQKSTY 1335
            E+  S F RR  + GAASVL    VLAACGSD            XXXXXXXXXX  D  T TFGSNYSDEKPK+ +AAA+AATGV   INTVDHNT+Q+N   Y+ QPDD M WF+GYRMR FA KG+VGDISDVW   L D+++ FK ASTG+DGKQYFVPFY+Y W +HYRKS+FEE GY +PTT DE+LALA +M+ DG+ PF  ANDG WP MG FD+LNMRINGY +HV L+ G E WT D+ KAVF  W  LLP+++ + NGRTWQE+A +  +K  GMY LG F+ +N   +T Q  +DD+DFFAFP ++ ++GQ+AI+APIDGFMMAA P +E+ AKALLGGLG   AI+A++A++ + VA N  A T+GY+ +Q K+AELV  + +I+QFLDRDT PDF SNVV  A A F++DP+  D +L  ++EQ  TY
Sbjct:    5 ELEVSPFGRRRFIVGAASVLGAGAVLAACGSDGXXXXXXXXX--XXXXXXXXXXTGDGCTTTFGSNYSDEKPKAGMAAAIAATGVNGDINTVDHNTFQENFNTYIQQPDDTMAWFAGYRMRAFAKKGVVGDISDVWSSSLGDMSEGFKNASTGSDGKQYFVPFYFYAWGIHYRKSLFEENGYEIPTTWDEMLALAAQMEADGITPFCAANDGGWPQMGMFDMLNMRINGYDFHVSLMGGNEDWTSDEVKAVFAAWNELLPYYEPDANGRTWQESANSFGEKSCGMYLLGNFLTSNFDAATQQDIIDDIDFFAFPEINPDYGQEAIEAPIDGFMMAASPDDEECAKALLGGLGSKEAIEAYIAVDPSVVAANGAADTSGYNALQQKAAELVGSATYISQFLDRDTDPDFASNVVGKAIADFLSDPTSIDGLLATVQEQAQTY 443          
BLAST of mRNA_P-wetherbeei_contig16716.1.1 vs. uniprot
Match: A0A6B0WT44_9ACTN (Carbohydrate ABC transporter substrate-binding protein n=4 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B0WT44_9ACTN)

HSP 1 Score: 482 bits (1241), Expect = 2.160e-165
Identity = 228/383 (59.53%), Postives = 289/383 (75.46%), Query Frame = 1
Query:  196 VGTVTFGSNYSDEKPKSALAAALAATGVTATINTVDHNTYQDNITNYLAQPDDVMCWFSGYRMRFFADKGLVGDISDVWGDLPDIADSFKTASTGNDGKQYFVPFYYYPWAVHYRKSVFEEKGYTVPTTRDELLALAGKMQDDGLVPFAYANDGKWPVMGTFDILNMRINGYQYHVDLLAGKESWTDDKTKAVFTEWAALLPFHQENPNGRTWQEAATALEKKEAGMYFLGTFVATN---STDQAYLDDLDFFAFPALSDEHGQDAIDAPIDGFMMAAKPKNEDGAKALLGGLGGAPAIDAFLAIEGASVAVNTKASTAGYSKIQAKSAELVSGSKFIAQFLDRDTSPDFVSNVVADAFASFIADPSQADTILKGIEEQKSTY 1335
            VGT T GSNYSDEKP++ALAAA+AATGV   INT+DHNTYQ+N   Y+ QPDDV+ WF+GYRMR FA KG+VGDISDVW +LP ++D F++A++G DGKQYFVP Y+YPWAVHYRKSVF + GY++PTT DE  AL   M  DG+ P   ANDG+WP MG FD+LNMRINGY +HV L+ G+E+W D + + +F+ W  +LP++Q +PNGRTWQ+AA AL  K AGMY +GTF+ +N    T    +DD+DFF FP +   +GQDAI+APIDGFMMAA+P NE+GAKALL GLG   AIDA+L+++ + VA N+ A T+GY+ +Q KSAE VS +KFI+QFLDRDT PDF +NV     A F+A P    TIL  +E +K TY
Sbjct:   71 VGTTTLGSNYSDEKPRNALAAAVAATGVDTIINTIDHNTYQENFNTYIQQPDDVVAWFAGYRMRAFASKGVVGDISDVWDNLPGMSDGFRSAASGLDGKQYFVPLYFYPWAVHYRKSVFADNGYSIPTTWDEFKALCDTMAADGITPLCAANDGRWPQMGMFDMLNMRINGYDFHVSLMGGRENWEDARVQNIFSTWEEILPYYQPDPNGRTWQDAANALGDKSAGMYLIGTFLTSNFDGDTQADIIDDIDFFLFPEVDPAYGQDAIEAPIDGFMMAAEPANEEGAKALLAGLGSVAAIDAYLSVDPSVVAANSNADTSGYNALQKKSAEAVSSAKFISQFLDRDTDPDFAANVAGVGIADFLATPGNIGTILADVEAKKQTY 453          
BLAST of mRNA_P-wetherbeei_contig16716.1.1 vs. uniprot
Match: A0A7Y1ZYQ5_9ACTN (Carbohydrate ABC transporter substrate-binding protein n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A7Y1ZYQ5_9ACTN)

HSP 1 Score: 481 bits (1237), Expect = 8.160e-165
Identity = 247/445 (55.51%), Postives = 307/445 (68.99%), Query Frame = 1
Query:   22 SPSPSEIGFSIFSRRTLLAGAASVL----VLAACGSDDKKSNGTTAPGXXXXXXXXXXXXXDVGTVTFGSNYSDEKPKSALAAALAATGVTATINTVDHNTYQDNITNYLAQPDDVMCWFSGYRMRFFADKGLVGDISDVWGDLPDIADSFKTASTGNDGKQYFVPFYYYPWAVHYRKSVFEEKGYTVPTTRDELLALAGKMQDDGLVPFAYANDGKWPVMGTFDILNMRINGYQYHVDLLAGKESWTDDKTKAVFTEWAALLPFHQENPNGRTWQEAATALEKKEAGMYFLGTFVATN---STDQAYLDDLDFFAFPALSDEHGQDAIDAPIDGFMMAAKPKNEDGAKALLGGLGGAPAIDAFLAIEGASVAVNTKASTAGYSKIQAKSAELVSGSKFIAQFLDRDTSPDFVSNVVADAFASFIADPSQADTILKGIEEQKSTY 1335
            SPSPSE G S+F RR  +AGAA                     + A    XXX X      DVG+ TFGSNYSDEKP++ +AAA+ ATGV   INT+DHN+YQ+N   Y+ QPDDV+ WF+GYRMR FA KG+VGDISDVW DL D ++ FK ASTG DGKQYFVPFY+Y W VHYRKS+FEEKGY +PT     +AL  +M+ DG+ P + ANDG WP MG FD++NMR NGY +HV L+ G ESWTDD+ K VFT W  LLPF+Q + NGR WQ AA +L  KE GMY +G F+ +N    T Q  +DD+DFF FP +   +GQDAI+APIDGFMMAA P NEDGAKALL GLG A AI+A++A++ + VA    A TA Y+ +Q K+++LV  +KFI+QFLDRDT P F S VV  A A F++DP   D +L  +EEQK+T+
Sbjct:    8 SPSPSEFGISLFGRRRFIAGAAGATGXXXXXXXXXXXXXXXXSSPATDAAXXXPXATEPSGDVGSTTFGSNYSDEKPRAGMAAAIEATGVATEINTIDHNSYQENFNTYVQQPDDVLAWFAGYRMRAFAAKGVVGDISDVWADL-DQSEGFKNASTGRDGKQYFVPFYFYAWGVHYRKSLFEEKGYEIPTDWAGFIALCEQMEADGITPISAANDGGWPQMGMFDMINMRTNGYDFHVSLMGGSESWTDDRVKQVFTNWMDLLPFYQPDANGREWQAAANSLGAKETGMYLIGNFLTSNFDAETQQDIIDDIDFFPFPEIDPAYGQDAIEAPIDGFMMAASPANEDGAKALLRGLGSADAINAYIAVDPSVVAAANGADTASYNALQQKASDLVGSAKFISQFLDRDTDPAFASEVVGKAIADFLSDPGSIDGLLATVEEQKATF 451          
BLAST of mRNA_P-wetherbeei_contig16716.1.1 vs. uniprot
Match: A0A7W0L0A5_9ACTN (Carbohydrate ABC transporter substrate-binding protein n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W0L0A5_9ACTN)

HSP 1 Score: 477 bits (1227), Expect = 3.290e-163
Identity = 266/453 (58.72%), Postives = 317/453 (69.98%), Query Frame = 1
Query:   22 SPSPSEIGFSIFSRRTLLAGAASVL----VLAACGSDDKKSNGTTAPGXXXXXXXXXXXXXD-------VGTVTFGSNYSDEKPKSALAAALAA---TGVTATINTVDHNTYQDNITNYLAQPDDVMCWFSGYRMRFFADKGLVGDISDVWGDLPDIADSFKTASTGNDGKQYFVPFYYYPWAVHYRKSVFEEKGYTVPTTRDELLALAGKMQDDGLVPFAYANDGKWPVMGTFDILNMRINGYQYHVDLLAGKESWTDDKTKAVFTEWAALLPFHQENPNGRTWQEAATALEKKEAGMYFLGTFVATNSTDQAYLDDLDFFAFPALSDEHGQDAIDAPIDGFMMAAKPKNEDGAKALLGGLGGAPAIDAFLAIEGASVAVNTKASTAGYSKIQAKSAELVSGSKFIAQFLDRDTSPDFVSNVVADAFASFIADPSQADTILKGIEEQKSTYL 1338
            SP+PS    S  SRR +LAGA ++L    VLAACG             XXXXXXXXXXXXX         GT+T GSNYSD  P +ALAA +A      V   +NTVDHNT+Q+NITNYL QPDDV+ WF+GYR+++FA +G++GDISDVWG L   ++ FK ASTG D KQY VP Y YPWAVHYR S FEEKGY VP+T DEL+ LA +M  D + PF+  NDGKWP MGTFDILNMRINGYQ+HVDL+AG   WT D+ KAVF  +  LLPFHQ  PNGRTWQEAATA++  E GM  LGTFV+    D   LDDLDFF FPA++DE+G D+IDAPIDGFMMAA PKNE+ AK LL  LG   A  AFL     SVA +T+A T+GY+ +Q KSAEL+S +  IAQFLDRDT+P+F SNV+ DA A F+ADP   D+IL  +E +K    
Sbjct:    9 SPAPSAFPASSISRRQMLAGAGALLGVSAVLAACGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTATGTLTLGSNYSDAVPAAALAAMIAGFPNKNVDVKVNTVDHNTFQENITNYLQQPDDVITWFAGYRLQYFAAQGVLGDISDVWGGLTGFSEGFKAASTGEDNKQYLVPLYNYPWAVHYRPSFFEEKGYAVPSTLDELMGLADQMMTDDVTPFSLGNDGKWPAMGTFDILNMRINGYQFHVDLMAGDGDWTSDEVKAVFAAFGDLLPFHQSGPNGRTWQEAATAMKSGETGMMLLGTFVSEQFADS--LDDLDFFPFPAINDEYGTDSIDAPIDGFMMAAAPKNEEAAKELLAYLGTGEAAIAFLTENPGSVAASTEADTSGYTALQEKSAELISSTANIAQFLDRDTNPEFASNVMGDALADFLADPGSIDSILDDVEARKQAIF 459          
BLAST of mRNA_P-wetherbeei_contig16716.1.1 vs. uniprot
Match: A0A7K2E306_9ACTN (Carbohydrate ABC transporter substrate-binding protein n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K2E306_9ACTN)

HSP 1 Score: 468 bits (1205), Expect = 5.040e-160
Identity = 227/383 (59.27%), Postives = 283/383 (73.89%), Query Frame = 1
Query:  196 VGTVTFGSNYSDEKPKSALAAALAATGVTATINTVDHNTYQDNITNYLAQPDDVMCWFSGYRMRFFADKGLVGDISDVWGDLPDIADSFKTASTGNDGKQYFVPFYYYPWAVHYRKSVFEEKGYTVPTTRDELLALAGKMQDDGLVPFAYANDGKWPVMGTFDILNMRINGYQYHVDLLAGKESWTDDKTKAVFTEWAALLPFHQENPNGRTWQEAATALEKKEAGMYFLGTFVATNSTDQAY---LDDLDFFAFPALSDEHGQDAIDAPIDGFMMAAKPKNEDGAKALLGGLGGAPAIDAFLAIEGASVAVNTKASTAGYSKIQAKSAELVSGSKFIAQFLDRDTSPDFVSNVVADAFASFIADPSQADTILKGIEEQKSTY 1335
            VGT T GSNYSD  PK+ALAAA+AATGV   INT+DHNTYQDN   Y+ QPDDVM WF+GYRMR FA KG+VGDISDVW +L  ++ +F++AS+G DG QYFVP Y+YPWAVHYRKS+F + GY +P   DE  AL   M+ DGL+P   ANDG+WP MG FD+LN+RINGY +HV L+ G+E W D + + VF+ W  +LP++Q + NGRTWQ+AA  L  K AGMY LGTFV +N   +A    +DD+DFF FP ++ EHGQDAI+APIDGFMMAA+P NE GAKALL GLG   AIDA+L+++ A VA N+ A T+GY+ +Q KSAE V+ + +IAQFLDRDT PDF +NVV    A F+A P    TIL  IE +K T+
Sbjct:   65 VGTTTLGSNYSDANPKAALAAAVAATGVDTEINTIDHNTYQDNFNTYVQQPDDVMAWFAGYRMRAFASKGVVGDISDVWDNLDGMSGAFRSASSGLDGNQYFVPLYFYPWAVHYRKSLFADNGYDIPANWDEFKALCDTMEADGLIPLCAANDGRWPQMGMFDMLNLRINGYDFHVSLMGGREDWEDARVQNVFSTWEEILPYYQPDANGRTWQDAANNLGDKSAGMYLLGTFVVSNFDREAQADIIDDIDFFLFPEVNPEHGQDAIEAPIDGFMMAAEPANEAGAKALLTGLGSVEAIDAYLSVDPAVVAANSNADTSGYNALQRKSAEAVATASYIAQFLDRDTDPDFAANVVGVGIADFLATPGSIGTILADIEAKKQTF 447          
BLAST of mRNA_P-wetherbeei_contig16716.1.1 vs. uniprot
Match: A0A6N9GJ46_9ACTN (Carbohydrate ABC transporter substrate-binding protein n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6N9GJ46_9ACTN)

HSP 1 Score: 462 bits (1190), Expect = 7.970e-158
Identity = 221/380 (58.16%), Postives = 279/380 (73.42%), Query Frame = 1
Query:  199 GTVTFGSNYSDEKPKSALAAALAATGVTATINTVDHNTYQDNITNYLAQPDDVMCWFSGYRMRFFADKGLVGDISDVWGDLPDIADSFKTASTGNDGKQYFVPFYYYPWAVHYRKSVFEEKGYTVPTTRDELLALAGKMQDDGLVPFAYANDGKWPVMGTFDILNMRINGYQYHVDLLAGKESWTDDKTKAVFTEWAALLPFHQENPNGRTWQEAATALEKKEAGMYFLGTFVATN-STDQAYLDDLDFFAFPALSDEHGQDAIDAPIDGFMMAAKPKNEDGAKALLGGLGGAPAIDAFLAIEGASVAVNTKASTAGYSKIQAKSAELVSGSKFIAQFLDRDTSPDFVSNVVADAFASFIADPSQADTILKGIEEQKSTY 1335
            G+ T GSN+S E PK+ALAAA+AATGV  TINT+DHNTYQDN   Y+ QPDDV+ WF+GYRMR FA KG++GDISDVW  L  ++D F++AST  DGKQYFVPFY+YPWAVHYRKS+F + GY++PTT  E  AL   M+ DG++P   ANDG+WP MG FD++N+R+NGY YHV L+ G ESW   + K VF+ W  +LP++Q + NGR W+++A AL  K AGM+ +GTF+A      +   +DLDFF FP ++ EHGQDAI+APIDGFMMAA P+NE GAKALLGGLG APAIDAFL +  + VA N+ A+T+GY+ +Q  SA  V  +K IAQFLDRDT PDF + VV    A F+  P   DTIL  IE +K T+
Sbjct:   63 GSTTLGSNFSGEVPKAALAAAVAATGVETTINTIDHNTYQDNFNTYIQQPDDVVSWFAGYRMRAFAGKGVLGDISDVWSGLSGMSDGFRSASTALDGKQYFVPFYFYPWAVHYRKSLFADMGYSIPTTWGEFKALCDTMEGDGVIPLCAANDGRWPQMGMFDMINLRVNGYDYHVSLMGGNESWESAEVKNVFSTWEEILPYYQPDANGRAWEDSAVALGDKSAGMFLIGTFLADQYPAGEEIFEDLDFFLFPEINAEHGQDAIEAPIDGFMMAASPENETGAKALLGGLGSAPAIDAFLDVNPSVVAANSNANTSGYNSLQQSSATAVGSAKQIAQFLDRDTDPDFAAQVVGTGIADFLTSPGSIDTILADIEAKKQTF 442          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16716.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7X9KK87_9ACTN2.390e-19768.20Carbohydrate ABC transporter substrate-binding pro... [more]
A0A3C2B3Z6_9ACTN5.700e-18064.66Sugar ABC transporter substrate-binding protein n=... [more]
A0A539E0J4_9ACTN2.670e-17663.71Multiple sugar transport system substrate-binding ... [more]
A0A2G6K8P2_9ACTN1.020e-17457.37Sugar ABC transporter substrate-binding protein n=... [more]
A0A524ND14_9ACTN1.230e-16958.50Carbohydrate ABC transporter substrate-binding pro... [more]
A0A6B0WT44_9ACTN2.160e-16559.53Carbohydrate ABC transporter substrate-binding pro... [more]
A0A7Y1ZYQ5_9ACTN8.160e-16555.51Carbohydrate ABC transporter substrate-binding pro... [more]
A0A7W0L0A5_9ACTN3.290e-16358.72Carbohydrate ABC transporter substrate-binding pro... [more]
A0A7K2E306_9ACTN5.040e-16059.27Carbohydrate ABC transporter substrate-binding pro... [more]
A0A6N9GJ46_9ACTN7.970e-15858.16Carbohydrate ABC transporter substrate-binding pro... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16716contigP-wetherbeei_contig16716:60..1403 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog644283.Micau_1714
PFAMsSBP_bac_1,SBP_bac_8
Model size1344
Max annot lvl201174|Actinobacteria
KEGG koko:K02027
KEGG TC3.A.1.1
KEGG ModuleM00207
Hectar predicted targeting categorysignal peptide
Exons1
Evalue4.8e-144
EggNOG OGsCOG1653@1|root,COG1653@2|Bacteria,2GP9H@201174|Actinobacteria,4D8I0@85008|Micromonosporales
DescriptionBacterial extracellular solute-binding protein
Cds size1326
COG categoryG
BRITEko00000,ko00002,ko02000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186095.4839888-CDS-P-wetherbeei_contig16716:59..13851683186095.4839888-CDS-P-wetherbeei_contig16716:59..1385Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16716 60..1385 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186095.4999795-UTR-P-wetherbeei_contig16716:1385..14031683186095.4999795-UTR-P-wetherbeei_contig16716:1385..1403Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig16716 1386..1403 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16716.1.1prot_P-wetherbeei_contig16716.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig16716 60..1385 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig16716.1.1

>prot_P-wetherbeei_contig16716.1.1 ID=prot_P-wetherbeei_contig16716.1.1|Name=mRNA_P-wetherbeei_contig16716.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=442bp
MSPSPSEIGFSIFSRRTLLAGAASVLVLAACGSDDKKSNGTTAPGGTTAP
GGTTAPGGDVGTVTFGSNYSDEKPKSALAAALAATGVTATINTVDHNTYQ
DNITNYLAQPDDVMCWFSGYRMRFFADKGLVGDISDVWGDLPDIADSFKT
ASTGNDGKQYFVPFYYYPWAVHYRKSVFEEKGYTVPTTRDELLALAGKMQ
DDGLVPFAYANDGKWPVMGTFDILNMRINGYQYHVDLLAGKESWTDDKTK
AVFTEWAALLPFHQENPNGRTWQEAATALEKKEAGMYFLGTFVATNSTDQ
AYLDDLDFFAFPALSDEHGQDAIDAPIDGFMMAAKPKNEDGAKALLGGLG
GAPAIDAFLAIEGASVAVNTKASTAGYSKIQAKSAELVSGSKFIAQFLDR
DTSPDFVSNVVADAFASFIADPSQADTILKGIEEQKSTYLS*
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mRNA from alignment at P-wetherbeei_contig16716:60..1403-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig16716.1.1 ID=mRNA_P-wetherbeei_contig16716.1.1|Name=mRNA_P-wetherbeei_contig16716.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1344bp|location=Sequence derived from alignment at P-wetherbeei_contig16716:60..1403- (Phaeothamnion wetherbeei SAG_119_79)
GTGTCCGGGAAATACGAGATGTCGCCGAGCCCGTCGGAGATCGGGTTCTC GATCTTCAGCCGCCGCACGTTGCTGGCCGGTGCGGCCAGCGTGCTGGTGC TCGCCGCGTGCGGCAGCGATGACAAGAAGTCGAACGGGACCACCGCACCT GGCGGGACCACCGCACCCGGCGGGACCACCGCACCCGGCGGCGACGTCGG CACCGTCACGTTCGGCTCGAACTACAGCGACGAGAAGCCGAAGAGCGCGT TGGCCGCGGCGCTGGCCGCCACGGGCGTGACGGCGACGATCAACACGGTC GACCACAACACGTACCAGGACAACATCACCAACTACCTCGCCCAGCCGGA CGACGTGATGTGCTGGTTCTCCGGCTACCGGATGCGGTTCTTCGCCGACA AGGGCCTCGTCGGCGACATCAGCGATGTGTGGGGCGACCTGCCCGACATC GCCGACAGCTTCAAGACCGCTTCGACGGGCAACGACGGCAAGCAGTACTT CGTGCCGTTCTACTACTACCCCTGGGCGGTCCACTACCGGAAGAGCGTCT TCGAGGAGAAGGGCTACACCGTCCCCACGACGCGCGACGAGCTGCTGGCC CTCGCCGGCAAGATGCAGGACGACGGGCTCGTCCCGTTCGCCTACGCGAA CGACGGCAAGTGGCCCGTGATGGGCACGTTCGACATCTTGAACATGCGCA TCAACGGGTACCAGTACCACGTCGACCTGCTTGCCGGGAAGGAGAGCTGG ACCGACGACAAGACGAAGGCGGTGTTCACCGAGTGGGCCGCGCTGCTGCC GTTCCACCAGGAGAACCCGAACGGGCGCACATGGCAGGAGGCAGCCACCG CACTGGAGAAGAAGGAAGCCGGCATGTACTTCCTCGGCACCTTCGTCGCC ACCAACTCGACCGATCAGGCGTACCTCGACGACCTCGACTTCTTCGCCTT CCCGGCCCTCAGCGACGAGCACGGGCAGGACGCGATCGACGCACCGATCG ACGGCTTCATGATGGCCGCCAAGCCCAAGAACGAGGACGGTGCCAAGGCG CTGCTCGGCGGTCTCGGCGGGGCGCCGGCGATCGATGCCTTCCTCGCCAT CGAGGGAGCGAGCGTCGCGGTGAACACGAAGGCCAGCACGGCCGGCTACT CGAAGATCCAGGCGAAGTCCGCCGAGCTCGTCAGTGGCTCGAAGTTCATC GCCCAGTTCCTCGACCGCGACACCAGCCCGGACTTCGTCTCCAACGTCGT CGCCGATGCGTTCGCCAGCTTCATCGCCGACCCGTCACAGGCCGACACGA TCCTCAAGGGGATCGAGGAGCAGAAGTCGACGTACCTGAGCTAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig16716:60..1403-

>mRNA_P-wetherbeei_contig16716.1.1 ID=mRNA_P-wetherbeei_contig16716.1.1|Name=mRNA_P-wetherbeei_contig16716.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1326bp|location=Sequence derived from alignment at P-wetherbeei_contig16716:60..1403- (Phaeothamnion wetherbeei SAG_119_79)
ATGTCGCCGAGCCCGTCGGAGATCGGGTTCTCGATCTTCAGCCGCCGCAC
GTTGCTGGCCGGTGCGGCCAGCGTGCTGGTGCTCGCCGCGTGCGGCAGCG
ATGACAAGAAGTCGAACGGGACCACCGCACCTGGCGGGACCACCGCACCC
GGCGGGACCACCGCACCCGGCGGCGACGTCGGCACCGTCACGTTCGGCTC
GAACTACAGCGACGAGAAGCCGAAGAGCGCGTTGGCCGCGGCGCTGGCCG
CCACGGGCGTGACGGCGACGATCAACACGGTCGACCACAACACGTACCAG
GACAACATCACCAACTACCTCGCCCAGCCGGACGACGTGATGTGCTGGTT
CTCCGGCTACCGGATGCGGTTCTTCGCCGACAAGGGCCTCGTCGGCGACA
TCAGCGATGTGTGGGGCGACCTGCCCGACATCGCCGACAGCTTCAAGACC
GCTTCGACGGGCAACGACGGCAAGCAGTACTTCGTGCCGTTCTACTACTA
CCCCTGGGCGGTCCACTACCGGAAGAGCGTCTTCGAGGAGAAGGGCTACA
CCGTCCCCACGACGCGCGACGAGCTGCTGGCCCTCGCCGGCAAGATGCAG
GACGACGGGCTCGTCCCGTTCGCCTACGCGAACGACGGCAAGTGGCCCGT
GATGGGCACGTTCGACATCTTGAACATGCGCATCAACGGGTACCAGTACC
ACGTCGACCTGCTTGCCGGGAAGGAGAGCTGGACCGACGACAAGACGAAG
GCGGTGTTCACCGAGTGGGCCGCGCTGCTGCCGTTCCACCAGGAGAACCC
GAACGGGCGCACATGGCAGGAGGCAGCCACCGCACTGGAGAAGAAGGAAG
CCGGCATGTACTTCCTCGGCACCTTCGTCGCCACCAACTCGACCGATCAG
GCGTACCTCGACGACCTCGACTTCTTCGCCTTCCCGGCCCTCAGCGACGA
GCACGGGCAGGACGCGATCGACGCACCGATCGACGGCTTCATGATGGCCG
CCAAGCCCAAGAACGAGGACGGTGCCAAGGCGCTGCTCGGCGGTCTCGGC
GGGGCGCCGGCGATCGATGCCTTCCTCGCCATCGAGGGAGCGAGCGTCGC
GGTGAACACGAAGGCCAGCACGGCCGGCTACTCGAAGATCCAGGCGAAGT
CCGCCGAGCTCGTCAGTGGCTCGAAGTTCATCGCCCAGTTCCTCGACCGC
GACACCAGCCCGGACTTCGTCTCCAACGTCGTCGCCGATGCGTTCGCCAG
CTTCATCGCCGACCCGTCACAGGCCGACACGATCCTCAAGGGGATCGAGG
AGCAGAAGTCGACGTACCTGAGCTAG
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