mRNA_P-wetherbeei_contig16702.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig16702.1.1 vs. uniprot
Match: A0A2E6LP65_9GAMM (TIGR03751 family conjugal transfer lipoprotein n=4 Tax=Bacteria TaxID=2 RepID=A0A2E6LP65_9GAMM) HSP 1 Score: 163 bits (413), Expect = 1.840e-49 Identity = 81/119 (68.07%), Postives = 94/119 (78.99%), Query Frame = 1
Query: 40 ISSALVGCASSKDAVLPHDGPTMKAIYDAHFEGMNAASTETARSAVGSRPLMPNDEAFAGFTRDSLTELDLHFPRLPNPTLVMYVFPHLAGPSRVPVPGYATTFPMYEHPEYALPGEVP 396
IS AL GCAS+K++VLP DGP+MKAIYDAHFEG+ A R +G+RPL +D AG++R + TEL+ FPRLPNPTLVMYVFPHLAGP RVPVPGYATTF +YE EYALPGEVP
Sbjct: 14 ISLALGGCASTKESVLPQDGPSMKAIYDAHFEGIGADDPLAVRRELGTRPLGDDDVDLAGYSRTAHTELETIFPRLPNPTLVMYVFPHLAGPERVPVPGYATTFTLYERVEYALPGEVP 132
BLAST of mRNA_P-wetherbeei_contig16702.1.1 vs. uniprot
Match: A0A7C3D465_9GAMM (TIGR03751 family conjugal transfer lipoprotein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A7C3D465_9GAMM) HSP 1 Score: 161 bits (408), Expect = 1.200e-48 Identity = 78/126 (61.90%), Postives = 96/126 (76.19%), Query Frame = 1
Query: 28 ILISISSALVGCASSKDAVLPHDGPTMKAIYDAHFEGMNAASTETARSAVGSRPLMPNDEAFAGFTRDSLTELDLHFPRLPNPTLVMYVFPHLAGPSRVPVPGYATTFPMYEHPEYALPGEVPPKP 405
+L SIS AL GCASSKDA+LP +GP+MKAIY++H MN T+ R +G+R L + A G+TRD+ E+D+ FPRLPNPTLVMYVFPHLAG ++ PVPGYAT FPMY+ EYALPGEVP +P
Sbjct: 10 VLSSISLALAGCASSKDAILPQNGPSMKAIYESHVNEMNTQDTQIIRHELGNRRLDTGESALQGYTRDAFNEIDILFPRLPNPTLVMYVFPHLAGKTQAPVPGYATAFPMYDRVEYALPGEVPGQP 135
BLAST of mRNA_P-wetherbeei_contig16702.1.1 vs. uniprot
Match: A0A7C1Y2R1_9GAMM (TIGR03751 family conjugal transfer lipoprotein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A7C1Y2R1_9GAMM) HSP 1 Score: 159 bits (403), Expect = 6.910e-48 Identity = 76/123 (61.79%), Postives = 92/123 (74.80%), Query Frame = 1
Query: 37 SISSALVGCASSKDAVLPHDGPTMKAIYDAHFEGMNAASTETARSAVGSRPLMPNDEAFAGFTRDSLTELDLHFPRLPNPTLVMYVFPHLAGPSRVPVPGYATTFPMYEHPEYALPGEVPPKP 405
SIS L GCAS+K+AVLP DGPTMKAIY+ H + MN + R +G+RPLM + G++RD+ E+D+ FPRLPNPTLVMYVFPHL+G + PVPGYAT FPMYE EYALPGEVP +P
Sbjct: 13 SISLVLGGCASTKEAVLPQDGPTMKAIYERHIDEMNMRDPQVVRRELGNRPLMTGEADLQGYSRDAFNEIDVLFPRLPNPTLVMYVFPHLSGDTHAPVPGYATAFPMYEQVEYALPGEVPVRP 135
BLAST of mRNA_P-wetherbeei_contig16702.1.1 vs. uniprot
Match: A0A7C2K3Y7_9GAMM (TIGR03751 family conjugal transfer lipoprotein n=1 Tax=Mizugakiibacter sp. TaxID=1972610 RepID=A0A7C2K3Y7_9GAMM) HSP 1 Score: 157 bits (397), Expect = 5.650e-47 Identity = 75/119 (63.03%), Postives = 87/119 (73.11%), Query Frame = 1
Query: 40 ISSALVGCASSKDAVLPHDGPTMKAIYDAHFEGMNAASTETARSAVGSRPLMPNDEAFAGFTRDSLTELDLHFPRLPNPTLVMYVFPHLAGPSRVPVPGYATTFPMYEHPEYALPGEVP 396
IS L GCAS+K+AVLP DGP+MK IYD H MNA + + R +G+R L + A G+TRD+ E+D+ FPRLPNPTLVMYVFPHLAG R PVPGY T FPMYE EYALPGEVP
Sbjct: 14 ISLVLAGCASTKEAVLPQDGPSMKTIYDGHIHAMNARNPQVIRHELGNRGLNTGEAALQGYTRDAFNEIDVLFPRLPNPTLVMYVFPHLAGQMRAPVPGYTTAFPMYEQVEYALPGEVP 132
BLAST of mRNA_P-wetherbeei_contig16702.1.1 vs. uniprot
Match: A0A7C2K545_9GAMM (TIGR03751 family conjugal transfer lipoprotein n=1 Tax=Mizugakiibacter sp. TaxID=1972610 RepID=A0A7C2K545_9GAMM) HSP 1 Score: 157 bits (397), Expect = 5.650e-47 Identity = 77/130 (59.23%), Postives = 96/130 (73.85%), Query Frame = 1
Query: 16 TRLCILISISSALVGCASSKDAVLPHDGPTMKAIYDAHFEGMNAASTETARSAVGSRPLMPNDEAFAGFTRDSLTELDLHFPRLPNPTLVMYVFPHLAGPSRVPVPGYATTFPMYEHPEYALPGEVPPKP 405
TR+ L IS L GC S+KD++LP DGP+MKAIY++H MNA + R A+G+R L + A G+TRD+ E+D+ FPRLPNPTLVMYVFPHL+G ++ PVPGYAT FPMYE EYALPGEVP +P
Sbjct: 6 TRIFALGLISLILAGCVSTKDSILPQDGPSMKAIYESHVNEMNARDPQVIRHALGNRRLNTGEAALQGYTRDAFNEIDVLFPRLPNPTLVMYVFPHLSGETQAPVPGYATAFPMYEQVEYALPGEVPGQP 135
BLAST of mRNA_P-wetherbeei_contig16702.1.1 vs. uniprot
Match: UPI0004ACEC37 (TIGR03751 family conjugal transfer lipoprotein n=1 Tax=Sedimenticola selenatireducens TaxID=191960 RepID=UPI0004ACEC37) HSP 1 Score: 157 bits (396), Expect = 6.860e-47 Identity = 75/119 (63.03%), Postives = 89/119 (74.79%), Query Frame = 1
Query: 49 ALVGCASSKDAVLPHDGPTMKAIYDAHFEGMNAASTETARSAVGSRPLMPNDEAFAGFTRDSLTELDLHFPRLPNPTLVMYVFPHLAGPSRVPVPGYATTFPMYEHPEYALPGEVPPKP 405
+L GCAS+K+AVLP DGP+MKAIY H + MNA + R +GSRP++ D + G+TRD+ E+D FPRLPNPTLVMYVFPHLAG V VPGYAT FPMYE EYALPGEVP +P
Sbjct: 15 SLAGCASTKEAVLPQDGPSMKAIYQGHIQEMNAQDPLSIRQELGSRPILTGDTSLHGYTRDAANEIDAIFPRLPNPTLVMYVFPHLAGEEPVSVPGYATVFPMYERTEYALPGEVPARP 133
BLAST of mRNA_P-wetherbeei_contig16702.1.1 vs. uniprot
Match: A0A7Z0VLJ3_9GAMM (Uncharacterized protein n=8 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A7Z0VLJ3_9GAMM) HSP 1 Score: 153 bits (387), Expect = 1.870e-45 Identity = 72/118 (61.02%), Postives = 87/118 (73.73%), Query Frame = 1
Query: 40 ISSALVGCASSKDAVLPHDGPTMKAIYDAHFEGMNAASTETARSAVGSRPLMPNDEAFAGFTRDSLTELDLHFPRLPNPTLVMYVFPHLAGPSRVPVPGYATTFPMYEHPEYALPGEV 393
IS L GCAS+KD VLP DGP+MKAIY+ H MNA + + R +GSR ++ + A G+TRD+ E+D+ FPRLPNPTLVMY+FPHLAG + PVPGY T FPMYE EYALPGEV
Sbjct: 14 ISLVLAGCASTKDTVLPQDGPSMKAIYEGHVHEMNADNPQVIRGELGSRSIVSGEAALHGYTRDAFNEIDVLFPRLPNPTLVMYIFPHLAGDAGAPVPGYTTAFPMYEQVEYALPGEV 131
BLAST of mRNA_P-wetherbeei_contig16702.1.1 vs. uniprot
Match: A0A2E6LLD6_9GAMM (TIGR03751 family conjugal transfer lipoprotein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E6LLD6_9GAMM) HSP 1 Score: 153 bits (386), Expect = 2.350e-45 Identity = 74/115 (64.35%), Postives = 88/115 (76.52%), Query Frame = 1
Query: 52 LVGCASSKDAVLPHDGPTMKAIYDAHFEGMNAASTETARSAVGSRPLMPNDEAFAGFTRDSLTELDLHFPRLPNPTLVMYVFPHLAGPSRVPVPGYATTFPMYEHPEYALPGEVP 396
L+GCAS+KD+VLP DGP+MK+IYDAH + A + R V RP+ +D AG++R + TEL+ FPRLPNPTLVMYVFPHLAG RVPVPGYATTFP+YE EYALPGEVP
Sbjct: 18 LMGCASTKDSVLPDDGPSMKSIYDAHVASVGAEAVTALRREVAGRPVGHDDVDLAGYSRTAYTELETMFPRLPNPTLVMYVFPHLAGVERVPVPGYATTFPLYERVEYALPGEVP 132
BLAST of mRNA_P-wetherbeei_contig16702.1.1 vs. uniprot
Match: A4AE44_9GAMM (Conjugative transfer region lipoprotein family n=1 Tax=Congregibacter litoralis KT71 TaxID=314285 RepID=A4AE44_9GAMM) HSP 1 Score: 149 bits (377), Expect = 7.240e-44 Identity = 74/123 (60.16%), Postives = 90/123 (73.17%), Query Frame = 1
Query: 34 ISISSALV---GCASSKDAVLPHDGPTMKAIYDAHFEGMNAASTETARSAVGSRPLMPNDEAFAGFTRDSLTELDLHFPRLPNPTLVMYVFPHLAGPSRVPVPGYATTFPMYEHPEYALPGEV 393
IS+++A + GC S+KD VLP +GP+MKAIYDAHF GM A + A+G RP+ + AG++R + TELD FPRLPNPTLVMY+FPHLAG R PVPGYATTF +YE EYALPGEV
Sbjct: 14 ISLAAAFILLSGCTSTKDTVLPQNGPSMKAIYDAHFTGMGADDPTQVKHALGGRPIGNAEADLAGYSRTAHTELDTLFPRLPNPTLVMYIFPHLAGTQRTPVPGYATTFTLYERVEYALPGEV 136
BLAST of mRNA_P-wetherbeei_contig16702.1.1 vs. uniprot
Match: A0A2N6CW29_9GAMM (TIGR03751 family conjugal transfer lipoprotein n=2 Tax=Sedimenticola selenatireducens TaxID=191960 RepID=A0A2N6CW29_9GAMM) HSP 1 Score: 144 bits (363), Expect = 7.590e-42 Identity = 69/119 (57.98%), Postives = 84/119 (70.59%), Query Frame = 1
Query: 40 ISSALVGCASSKDAVLPHDGPTMKAIYDAHFEGMNAASTETARSAVGSRPLMPNDEAFAGFTRDSLTELDLHFPRLPNPTLVMYVFPHLAGPSRVPVPGYATTFPMYEHPEYALPGEVP 396
IS L GCAS+KDAVLP DGP+M+ IY H + M A T +G P++ D + G+TR++ E+D+ FPRLPNPTLVMY+FPHLAG PVPGY TTFP+YE EYALPGEVP
Sbjct: 14 ISLVLGGCASTKDAVLPQDGPSMQTIYQQHIQEMGARDPLTLHETLGGSPVVDADGSLHGYTREAYDEIDVIFPRLPNPTLVMYLFPHLAGEESAPVPGYVTTFPLYERIEYALPGEVP 132 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16702.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig16702.1.1 >prot_P-wetherbeei_contig16702.1.1 ID=prot_P-wetherbeei_contig16702.1.1|Name=mRNA_P-wetherbeei_contig16702.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=135bp MRLVVTRLCILISISSALVGCASSKDAVLPHDGPTMKAIYDAHFEGMNAAback to top mRNA from alignment at P-wetherbeei_contig16702:352..756+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig16702.1.1 ID=mRNA_P-wetherbeei_contig16702.1.1|Name=mRNA_P-wetherbeei_contig16702.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=405bp|location=Sequence derived from alignment at P-wetherbeei_contig16702:352..756+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig16702:352..756+ >mRNA_P-wetherbeei_contig16702.1.1 ID=mRNA_P-wetherbeei_contig16702.1.1|Name=mRNA_P-wetherbeei_contig16702.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=405bp|location=Sequence derived from alignment at P-wetherbeei_contig16702:352..756+ (Phaeothamnion wetherbeei SAG_119_79)back to top |