mRNA_P-wetherbeei_contig167.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig167.1.1
Unique NamemRNA_P-wetherbeei_contig167.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig167.1.1 vs. uniprot
Match: D7G851_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G851_ECTSI)

HSP 1 Score: 354 bits (908), Expect = 2.020e-114
Identity = 187/272 (68.75%), Postives = 224/272 (82.35%), Query Frame = 3
Query:  273 RSAVQKTIVSVASAMIFGIFVLLVKGRQSGMEFYAAYIVEQSLSVDNLFVFLMLFEYFSVPLEFQGRVLTWGIIGAIVMRGIMIAAGVVVVKSFRWIIIVFAGILLASAYKLFTEQDGADHDLSGNGVVKLAKRLVGAVDSYDGDRFFAAPDVSG-GRRVATPLLLCLVCIELSDFVFAVDSIPAVLGVSQDPFIVYSSNIFAIMGLRSIYTIINRAVQQLPYLKPAVAAVLGFVGTKMLLEFAHIVIGTGLSLAIVVFLLAGGVLLSIFER 1085
            R AV++T++S+A +  FG+  +L +GRQSG+EF+A Y+VEQSLSVDNLFVFLM F+YF VPLE QGRVLTWGI+GAI+MRG+MIA GV  VK F+WI +VFA ILL S+YKL  E +  DHDLS N +V+++KRLVGAVD YDGDRFF    + G G+ VATPLLLCLVCIELSDFVFAVDSIPAVLG+SQDPF+V++SN+FAIMGLRSIY II +AV QLPYLKPAVA VLGFVG KMLLE+ HI I TG SL +V+ L+ GGV LS+  R
Sbjct:  113 RMAVKRTVMSIALSCGFGLATMLFRGRQSGLEFFAGYLVEQSLSVDNLFVFLMTFDYFQVPLEHQGRVLTWGIVGAILMRGVMIAFGVAAVKRFQWITVVFAAILLVSSYKLLVESEEEDHDLSQNTLVRMSKRLVGAVDEYDGDRFFTR--LGGKGKTVATPLLLCLVCIELSDFVFAVDSIPAVLGISQDPFVVFTSNLFAIMGLRSIYVIIAQAVSQLPYLKPAVALVLGFVGCKMLLEYVHINISTGWSLFVVLSLILGGVGLSLLAR 382          
BLAST of mRNA_P-wetherbeei_contig167.1.1 vs. uniprot
Match: A0A7S2RH37_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RH37_9STRA)

HSP 1 Score: 325 bits (832), Expect = 2.250e-104
Identity = 177/271 (65.31%), Postives = 212/271 (78.23%), Query Frame = 3
Query:  273 RSAVQKTIVSVASAMIFGIFVLLVKGRQSGMEFYAAYIVEQSLSVDNLFVFLMLFEYFSVPLEFQGRVLTWGIIGAIVMRGIMIAAGVVVVKSFRWIIIVFAGILLASAYKLFTEQDGADHDLSGNGVVKLAKRLVGAVDSYDGDRFFAAPDVSGGRRVATPLLLCLVCIELSDFVFAVDSIPAVLGVSQDPFIVYSSNIFAIMGLRSIYTIINRAVQQLPYLKPAVAAVLGFVGTKMLLEFAHIVIGTGLSLAIVVFLLAGGVLLSIFER 1085
            R +V  T+  VA A++FG  V   +GRQSG EF+A Y+VEQSLSVDNLFVFLMLF YF VPL +QGRVLTWGIIGA+VMRGIMI AGV  V+ FR +I++FA IL+ SA KLF E D  + DLS N V++L+K  VGAV+ YDGD+FF   D   G+R ATPLLLCLVCIELSDFVFAVDSIPAV+GVSQD  IVYSSNIFAIMGLRS+YT++ +AVQ LPYL+PAVA VL F+G KM++EF H  I   LSL +VV LLA G++LS+  +
Sbjct:   14 RQSVLSTVGCVALAVVFGAGVWHFRGRQSGFEFFAGYLVEQSLSVDNLFVFLMLFNYFQVPLSYQGRVLTWGIIGAVVMRGIMIVAGVAAVQKFRMVILLFAAILMLSAVKLFFESDEPE-DLSNNTVMRLSKFAVGAVEEYDGDKFFTILD---GQRRATPLLLCLVCIELSDFVFAVDSIPAVIGVSQDLLIVYSSNIFAIMGLRSLYTLVAKAVQDLPYLRPAVALVLAFIGLKMVMEFFHYEISISLSLGVVVTLLASGIVLSLIHK 280          
BLAST of mRNA_P-wetherbeei_contig167.1.1 vs. uniprot
Match: A0A7R9UD78_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UD78_9STRA)

HSP 1 Score: 318 bits (815), Expect = 3.990e-101
Identity = 169/283 (59.72%), Postives = 220/283 (77.74%), Query Frame = 3
Query:  276 SAVQKTIVSVASAMIFGIFVLLVKGRQSGMEFYAAYIVEQSLSVDNLFVFLMLFEYFSVPLEFQGRVLTWGIIGAIVMRGIMIAAGVVVVKSFRWIIIVFAGILLASAYKLFTEQDGADHDLSGNGVVKLAKRLVGAV-DSYDGDRFFAAPDVSGGRRVATPLLLCLVCIELSDFVFAVDSIPAVLGVSQDPFIVYSSNIFAIMGLRSIYTIINRAVQQLPYLKPAVAAVLGFVGTKMLLEFAHIVIGTGLSLAIVVFLLAGGVLLSIFERGWPMGQKRKNSD 1121
            +A+ +  +SVA A +FG+F + +KGR++G+ ++AAY+VEQSLSVDNLFVFLMLF YF VPL  QGRVLTWGI+GA++MRG MIA GV  V+ FRW+I+VFA +L+ S+ K+ + ++  + DLS N ++K++K+L+G V D YDG++FF      GG +VATPLLLCLVCIE+SDFVFAVDSIPAVLGVS DPFIVY+SNIFAI+ LRS+YT++ RAV  LPYLK AVA VL F+G KM+LEF  + IG G SL +V+ LL GGV+LS+  R    G+K K  D
Sbjct:   86 AALYRVCLSVAMACLFGVFTVFLKGREAGLAYFAAYLVEQSLSVDNLFVFLMLFAYFKVPLLHQGRVLTWGIVGAVLMRGFMIAVGVAAVQHFRWMILVFAAVLVFSSVKMLSGEEEQE-DLSDNYIIKMSKKLLGTVTDRYDGEKFFTE---QGGAKVATPLLLCLVCIEISDFVFAVDSIPAVLGVSHDPFIVYTSNIFAIIALRSLYTLVARAVNDLPYLKHAVALVLFFIGVKMVLEFFGVDIGIGTSLTVVLLLLVGGVVLSMIARWLGAGEKLKADD 364          
BLAST of mRNA_P-wetherbeei_contig167.1.1 vs. uniprot
Match: A0A835ZA94_9STRA (Integral membrane protein TerC family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA94_9STRA)

HSP 1 Score: 310 bits (795), Expect = 1.480e-99
Identity = 161/260 (61.92%), Postives = 206/260 (79.23%), Query Frame = 3
Query:  303 VASAMIFGIFVLLVKGRQSGMEFYAAYIVEQSLSVDNLFVFLMLFEYFSVPLEFQGRVLTWGIIGAIVMRGIMIAAGVVVVKSFRWIIIVFAGILLASAYKLFTEQDGADHDLSGNGVVKLAKRLVGAVDSYDGDRFFAAPDVSGGRRVATPLLLCLVCIELSDFVFAVDSIPAVLGVSQDPFIVYSSNIFAIMGLRSIYTIINRAVQQLPYLKPAVAAVLGFVGTKMLLEFAHIVIGTGLSLAIVVFLLAGGVLLSIFE 1082
            + SA+ FG+  + VKGRQSG+EF+A Y+VEQSLSVDNLFVF+MLFEYF VP  +QGRVLTWGIIGA+ MR +MI  GV  ++ FR +I+ FA ILLAS+ KL TE++  D DLS N V++++K  V + D Y+G++FF   D   G+++ATPLLLCLVCIELSDFVFAVDSIPAVLGVS+D FIVYSSN+FAI+ LRS+YT+++ A+  LPYLKP+VA VLGFVG KM  E+ H  IG G+SL++V  LL+GGV  SI++
Sbjct:    2 LGSAVAFGLGTMAVKGRQSGLEFFAGYLVEQSLSVDNLFVFIMLFEYFKVPAAYQGRVLTWGIIGAVSMRAVMIVVGVAAIQRFRGVILAFAAILLASSVKLLTEKEDEDGDLSNNIVLRISKFFVRSTDKYEGEKFFTVVD---GKKMATPLLLCLVCIELSDFVFAVDSIPAVLGVSKDTFIVYSSNVFAILALRSLYTLVSHAITDLPYLKPSVALVLGFVGLKMCAEYFHYEIGIGVSLSVVAVLLSGGVGASIWD 258          
BLAST of mRNA_P-wetherbeei_contig167.1.1 vs. uniprot
Match: A0A7S2E636_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2E636_9STRA)

HSP 1 Score: 311 bits (798), Expect = 3.880e-99
Identity = 171/269 (63.57%), Postives = 207/269 (76.95%), Query Frame = 3
Query:  273 RSAVQKTIVSVASAMIFGIFVLLVKGRQSGMEFYAAYIVEQSLSVDNLFVFLMLFEYFSVPLEFQGRVLTWGIIGAIVMRGIMIAAGVVVVKSFRWIIIVFAGILLASAYKLFTEQDGADHDLSGNGVVKLAKRLVGAVDSYDGDRFFAAPDVSGGRRVATPLLLCLVCIELSDFVFAVDSIPAVLGVSQDPFIVYSSNIFAIMGLRSIYTIINRAVQQLPYLKPAVAAVLGFVGTKMLLEFAHIVIGTGLSLAIVVFLLAGGVLLSIF 1079
            RS+V  T++ VA+A  FG  + +VKGR+SG EF+A Y+VEQSLSVDNLFVFLM+F YF VPLE QGRVLTWGIIGA++MRG+MI  GV  ++ FR +I++FA ILL SA KLF E D    DLS N V+K +K   GAVD YDG++F     V   RR ATPLLLCLVCIELSDFVFAVDSIPAV+GVSQD  +VYSSN+FAIMGLRS+YT++ +AV+ L YL+PAVA VL F+  KMLLEF H  I   LSL +V  LLAGG++LS+F
Sbjct:   16 RSSVIYTVLIVAAAAAFGSGIWVVKGRRSGFEFFAGYLVEQSLSVDNLFVFLMVFNYFQVPLECQGRVLTWGIIGAVLMRGVMITIGVAAIQRFRSVILIFAAILLVSAVKLFFESD-EPQDLSQNVVMKFSKFCTGAVDEYDGEKFIT---VVNNRRRATPLLLCLVCIELSDFVFAVDSIPAVIGVSQDALVVYSSNLFAIMGLRSLYTLVAKAVEDLAYLRPAVALVLCFISIKMLLEFFHYEIPIHLSLLVVALLLAGGIVLSLF 280          
BLAST of mRNA_P-wetherbeei_contig167.1.1 vs. uniprot
Match: A0A7S2Y1S8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1S8_9STRA)

HSP 1 Score: 311 bits (796), Expect = 2.180e-98
Identity = 163/268 (60.82%), Postives = 212/268 (79.10%), Query Frame = 3
Query:  273 RSAVQKTIVSVASAMIFGIFVLLVKGRQSGMEFYAAYIVEQSLSVDNLFVFLMLFEYFSVPLEFQGRVLTWGIIGAIVMRGIMIAAGVVVVKSFRWIIIVFAGILLASAYKLFTEQDGADHDLSGNGVVKLAKRLVGAVDSYDGDRFFAAPDVSGGRRVATPLLLCLVCIELSDFVFAVDSIPAVLGVSQDPFIVYSSNIFAIMGLRSIYTIINRAVQQLPYLKPAVAAVLGFVGTKMLLEFAHIVIGTGLSLAIVVFLLAGGVLLSI 1076
            + AV KT ++VASA +FG    +VKG+++GMEFYA Y+VEQSLSVDNLFVFLMLF+YF VPL +Q R LTWGIIGA+ MR +MI  GV  ++ FR +I++FAGILLAS++KLF E++G D DLS N ++K++ ++  +VD YDG++FF   +   G R ATPLL+CLVCIELSDFVFAVDSIPAV+GV++DPFIVYSSN+FAIM LRS+Y ++ +AV  LPYL+PAVA VL FVG KM+ EF H  + T +SLA+V  +L GG+ LS+
Sbjct:   84 KMAVLKTCIAVASAAVFGAGTWVVKGQKAGMEFYAGYLVEQSLSVDNLFVFLMLFDYFKVPLAYQNRCLTWGIIGAMSMRLVMILLGVAAIQKFRVVILLFAGILLASSWKLFFEEEG-DEDLSDNVILKISNKMFKSVDHYDGEKFFTKVN---GVRHATPLLMCLVCIELSDFVFAVDSIPAVIGVTKDPFIVYSSNMFAIMALRSLYVLVAQAVTDLPYLRPAVALVLAFVGAKMIAEFFHYELSTAISLAVVAAVLGGGIALSV 347          
BLAST of mRNA_P-wetherbeei_contig167.1.1 vs. uniprot
Match: W7THX1_9STRA (Integral membrane protein TerC n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7THX1_9STRA)

HSP 1 Score: 308 bits (789), Expect = 4.620e-97
Identity = 157/272 (57.72%), Postives = 210/272 (77.21%), Query Frame = 3
Query:  276 SAVQKTIVSVASAMIFGIFVLLVKGRQSGMEFYAAYIVEQSLSVDNLFVFLMLFEYFSVPLEFQGRVLTWGIIGAIVMRGIMIAAGVVVVKSFRWIIIVFAGILLASAYKLFTE--QDGADHDLSGNGVVKLAKRLVGAVDSYDGDRFFAAPDVSGGRRVATPLLLCLVCIELSDFVFAVDSIPAVLGVSQDPFIVYSSNIFAIMGLRSIYTIINRAVQQLPYLKPAVAAVLGFVGTKMLLEFAHIVIGTGLSLAIVVFLLAGGVLLSIFER 1085
            +AV++T+++V +A  FG  +  ++GRQ  MEF+A Y++E+SLSVDN+FVF+MLFEYF VP+E+Q R L+WGI+GA+ MRGIMI  GV  ++ FRW++++FAG+LL SA+KL  E   +G + DLS N +V  AK+LV AVD YDGD FF   +   G+R ATPL +CL+CIELSDFVFAVDSIPAVLGVS+DP IVYSSNIFAIM LRS+YT++  AV  L Y+KP+VA VL FVG KM+ EF H+ +   +SLA+V+ LL GG+ LS+ ++
Sbjct:  107 TAVRRTLLAVGAAFAFGFGLWFMEGRQPAMEFFAGYLIEESLSVDNIFVFIMLFEYFKVPIEYQSRALSWGIMGAVAMRGIMIFVGVAAIQRFRWVVLLFAGVLLGSAFKLLAEVGHEGGEEDLSNNLLVAWAKKLVHAVDEYDGDNFFTRRN---GKRYATPLFMCLICIELSDFVFAVDSIPAVLGVSKDPLIVYSSNIFAIMALRSLYTLVATAVNSLEYIKPSVALVLAFVGGKMVAEFFHVEVPISVSLAVVMSLLGGGIGLSLLKQ 375          
BLAST of mRNA_P-wetherbeei_contig167.1.1 vs. uniprot
Match: A0A7S2SRH4_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SRH4_9STRA)

HSP 1 Score: 299 bits (765), Expect = 1.030e-94
Identity = 165/273 (60.44%), Postives = 209/273 (76.56%), Query Frame = 3
Query:  267 DCRSAVQKTIVSVASAMIFGIFVLLVKGRQSGMEFYAAYIVEQSLSVDNLFVFLMLFEYFSVPLEFQGRVLTWGIIGAIVMRGIMIAAGVVVVKSFRWIIIVFAGILLASAYKLFTEQDGADHDLSGNGVVKLAKRLVGAVDSYDGDRFFAAPDVSGGRRVATPLLLCLVCIELSDFVFAVDSIPAVLGVSQDPFIVYSSNIFAIMGLRSIYTIINRAVQQLPYLKPAVAAVLGFVGTKMLLEFAHIVIGTGLSLAIVVFLLAGGVLLSIFER 1085
            + R A+ +  ++VA++  FG  V  VKGR S +EF+A Y+VEQSLSVDN+FVF++LF+YF VPL  Q + L WGIIGA+VMR IMI  GV  +K FR +I+VFAGIL+ASA KLF E + A+ DLS N V+++AK L  +VD +DG  FF    V+G RR ATPLLLC+VCIELSDFVFAVDSIPAVL +S+D  IV SSNIFAIM LRS+YT++ RAV  LPYL+PAVA +LGFVGTKM LE+ H+ I TGLSL++V  LL+GG+ LS+  +
Sbjct:   17 EFRQALIRVGLAVAASCAFGCGVWAVKGRTSALEFFAGYLVEQSLSVDNIFVFVLLFDYFKVPLALQPKALQWGIIGAVVMRAIMIVFGVAAIKHFRPVILVFAGILMASAVKLFFENE-AEEDLSENAVMRIAKSLCPSVDYFDGSNFFTM--VNGVRR-ATPLLLCVVCIELSDFVFAVDSIPAVLSISKDQLIVLSSNIFAIMALRSLYTLVARAVNDLPYLRPAVALILGFVGTKMALEYFHVEISTGLSLSVVAALLSGGIGLSLISQ 285          
BLAST of mRNA_P-wetherbeei_contig167.1.1 vs. uniprot
Match: F0Y6P3_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6P3_AURAN)

HSP 1 Score: 298 bits (764), Expect = 3.300e-94
Identity = 159/268 (59.33%), Postives = 201/268 (75.00%), Query Frame = 3
Query:  273 RSAVQKTIVSVASAMIFGIFVLLVKGRQSGMEFYAAYIVEQSLSVDNLFVFLMLFEYFSVPLEFQGRVLTWGIIGAIVMRGIMIAAGVVVVKSFRWIIIVFAGILLASAYKLFTEQDGADHDLSGNGVVKLAKRLVGAVDSYDGDRFFAAPDVSGGRRVATPLLLCLVCIELSDFVFAVDSIPAVLGVSQDPFIVYSSNIFAIMGLRSIYTIINRAVQQLPYLKPAVAAVLGFVGTKMLLEFAHIVIGTGLSLAIVVFLLAGGVLLSI 1076
            R ++ +T+ +VASA  FG+ +   +GR S + F++ Y+VEQSLSVDNLFVF+MLFEYF VP  FQ RVL+WGI+GAI+MRG+MI AGV  VK FRW  ++FAGILL S+ KL  E D  D D+  N V++L+++LVGA   YDGDRFF   D   G + ATPLLLCLVC+ELSD VFAVDSIPAVLG+S DPF+VYSSN+FAI GLR++Y ++ +AV  + YLKPAV AVL F+  KM+LE+ H  IGTG SL +VV LLA G   S+
Sbjct:   11 RRSLVQTVWAVASATAFGLILWYARGRDSAIAFFSGYLVEQSLSVDNLFVFIMLFEYFRVPPAFQQRVLSWGIVGAILMRGVMIVAGVAAVKRFRWTSLLFAGILLLSSVKLLMEGD-EDEDVGDNLVMRLSRKLVGATTEYDGDRFFTVVD---GAKRATPLLLCLVCVELSDVVFAVDSIPAVLGISTDPFVVYSSNVFAIAGLRALYALVAKAVDSMVYLKPAVCAVLVFISVKMILEYFHYAIGTGASLCVVVCLLALGAAASL 274          
BLAST of mRNA_P-wetherbeei_contig167.1.1 vs. uniprot
Match: A0A7S3XZU5_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZU5_HETAK)

HSP 1 Score: 298 bits (762), Expect = 6.710e-93
Identity = 153/273 (56.04%), Postives = 206/273 (75.46%), Query Frame = 3
Query:  267 DCRSAVQKTIVSVASAMIFGIFVLLVKGRQSGMEFYAAYIVEQSLSVDNLFVFLMLFEYFSVPLEFQGRVLTWGIIGAIVMRGIMIAAGVVVVKSFRWIIIVFAGILLASAYKLFTEQDGADHDLSGNGVVKLAKRLVGAVDSYDGDRFFAAPDVSGGRRVATPLLLCLVCIELSDFVFAVDSIPAVLGVSQDPFIVYSSNIFAIMGLRSIYTIINRAVQQLPYLKPAVAAVLGFVGTKMLLEFAHIVIGTGLSLAIVVFLLAGGVLLSIFER 1085
            + ++AV KT++ V +A+ FG     VKGRQ+ +EF+A Y+VEQSLSVDNLFVF+MLF+YF VP++FQ RVLTWGIIGA+ MR +MI  GV  ++ FR + ++FAGIL+ S YK+  E +  + DL  N ++KL+ ++V +   YDG++FF   D   G + ATPLL+CL+CIELSDFVFAVDSIPAV+GV++DPFIVYSSN+FAI  LRS+YT++ +AV  LPYLKPAVA VLGFVG KM  E+ H  +G G+SL +V  LL GG++ S+  +
Sbjct:   96 EYKAAVIKTVLVVLAAIAFGAGTWAVKGRQASLEFFAGYLVEQSLSVDNLFVFIMLFDYFKVPMQFQSRVLTWGIIGAMSMRLVMIVLGVAAIQKFRSVTLLFAGILIFSGYKMINESE-EEEDLEDNVIMKLSNKMVKSTTQYDGEKFFTKID---GVKYATPLLMCLICIELSDFVFAVDSIPAVIGVTKDPFIVYSSNLFAIAALRSLYTLVAKAVDDLPYLKPAVALVLGFVGCKMAAEYFHYEVGIGISLGVVGILLGGGIVASVIAK 364          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig167.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G851_ECTSI2.020e-11468.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2RH37_9STRA2.250e-10465.31Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7R9UD78_9STRA3.990e-10159.72Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A835ZA94_9STRA1.480e-9961.92Integral membrane protein TerC family-domain-conta... [more]
A0A7S2E636_9STRA3.880e-9963.57Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2Y1S8_9STRA2.180e-9860.82Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
W7THX1_9STRA4.620e-9757.72Integral membrane protein TerC n=3 Tax=Monodopsida... [more]
A0A7S2SRH4_9STRA1.030e-9460.44Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
F0Y6P3_AURAN3.300e-9459.33Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S3XZU5_HETAK6.710e-9356.04Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig167contigP-wetherbeei_contig167:4013..6561 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G851
PFAMsTerC
Model size1581
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006996,GO:0007275,GO:0008150,GO:0009507,GO:0009534,GO:0009535,GO:0009536,GO:0009579,GO:0009657,GO:0009668,GO:0009791,GO:0009987,GO:0010027,GO:0016020,GO:0016043,GO:0031976,GO:0031984,GO:0032501,GO:0032502,GO:0034357,GO:0042651,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0048856,GO:0055035,GO:0061024,GO:0071840,GO:0090351
Exons5
Evalue3.06e-114
EggNOG OGsCOG0861@1|root,2QQNF@2759|Eukaryota
Descriptionmembrane protein TERC
Cds size843
COG categoryP
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig167.1.1prot_P-wetherbeei_contig167.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig167 4437..6247 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186094.6974573-UTR-P-wetherbeei_contig167:4012..44361683186094.6974573-UTR-P-wetherbeei_contig167:4012..4436Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig167 4013..4436 -
1683186094.760693-UTR-P-wetherbeei_contig167:6247..65611683186094.760693-UTR-P-wetherbeei_contig167:6247..6561Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig167 6248..6561 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186094.7136438-CDS-P-wetherbeei_contig167:4436..47511683186094.7136438-CDS-P-wetherbeei_contig167:4436..4751Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig167 4437..4751 -
1683186094.724149-CDS-P-wetherbeei_contig167:5105..53911683186094.724149-CDS-P-wetherbeei_contig167:5105..5391Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig167 5106..5391 -
1683186094.7319472-CDS-P-wetherbeei_contig167:5599..56941683186094.7319472-CDS-P-wetherbeei_contig167:5599..5694Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig167 5600..5694 -
1683186094.7402408-CDS-P-wetherbeei_contig167:5961..60621683186094.7402408-CDS-P-wetherbeei_contig167:5961..6062Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig167 5962..6062 -
1683186094.7516441-CDS-P-wetherbeei_contig167:6201..62471683186094.7516441-CDS-P-wetherbeei_contig167:6201..6247Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig167 6202..6247 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig167.1.1

>prot_P-wetherbeei_contig167.1.1 ID=prot_P-wetherbeei_contig167.1.1|Name=mRNA_P-wetherbeei_contig167.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=281bp
MIFGIFVLLVKGRQSGMEFYAAYIVEQSLSVDNLFVFLMLFEYFSVPLEF
QGRVLTWGIIGAIVMRGIMIAAGVVVVKSFRWIIIVFAGILLASAYKLFT
EQDGADHDLSGNGVVKLAKRLVGAVDSYDGDRFFAAPDVSGGRRVATPLL
LCLVCIELSDFVFAVDSIPAVLGVSQDPFIVYSSNIFAIMGLRSIYTIIN
RAVQQLPYLKPAVAAVLGFVGTKMLLEFAHIVIGTGLSLAIVVFLLAGGV
LLSIFERGWPMGQKRKNSDSDAEDSGDLIV*
back to top

mRNA from alignment at P-wetherbeei_contig167:4013..6561-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig167.1.1 ID=mRNA_P-wetherbeei_contig167.1.1|Name=mRNA_P-wetherbeei_contig167.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2549bp|location=Sequence derived from alignment at P-wetherbeei_contig167:4013..6561- (Phaeothamnion wetherbeei SAG_119_79)
TATGGGAGCAGGGCTCCCGCTGGCGGACCCCGAGCGAAATGCAACGTCAA ACACTCCGACGACTTCTATCAACGCTTCGCATTACAGGTGAATTGATCCC TTTGGAGCGCATGCGATTGCTAGGGCAGTGCTGCTTGATCGCCAATGGTG TGAGGGCTAAGCACCTCTTGCATTGGTCTTGGAAATTTCTTGGCAGAGAA GCGGTCTCCCTCTTGCTTCCCTCTCTCCTTTGTGCTTTGCTCGGCTGAAA CGATCCCCGAACTTGGGACTGCAGATCTGCTGTACAGAAAACGATCGTGT CGGTCGCCAGCGCGATGATCTTTGGCATTTTCGTATTGCTCGTCAAAGGA CGACAATCAGGTCAGAACGGGCGCGTTAGTGTCTCGAAAGTCTCTGTAGC ATGTCCGCTGTTGCATGTCTATCACTCTCGCTACATTGGTGCTCGAGCTT GTCTGCTAGAGATGTTGACCTGTGCCTTTGCCACCTCCCCCCGACGCAGG AATGGAATTCTACGCTGCATATATAGTCGAGCAAAGTCTCAGTGTCGACA ATCTCTTCGTTTTTCTGATGTTATTTGAGTACTTTTCCGTGCCGTTGGAG GTGAGGTCATGCGAGCCGGGGACACAAATATTTAGATTGGCCGCTTGGGA GGAAACTCGGAAATTTGGTTTCTTCGAGCTTGCAAACACCTCTCTTCTAC GTAAATTGGAGGTAGCGAACGATAAAGCGTTCGATAGGTTTCGAGAGATT TGGCGAACTTCTCATTGCTGGGATCAACCGTTCGTGTCTTGGCGGCAATT TCATGTGTGCTCTGGCCAAGCGCCGTAATGGCCCACCGAACCTCAAATCT CTATGCTGTCTGCGCAGTTCCAGGGGCGGGTGCTCACGTGGGGCATTATC GGAGCTATCGTCATGAGGGGCATCATGATTGCGGCCGGCGTGGTGGTGGT GAAATCATTTAGGTGAATACACACATTGGAAAAGAAAGAAAAAGAAAGAA AAAGAGAGAGGTTGCTCGGAGGGACTGCCTGGAGGAGTTACGGCACCTTT TTCACGCCTCGGCAAGAACGGTTCCTGTGGGTCAGGCTGGGCTGCACCCT TAAAAATGCTCCCCTCGTCGCCGGGTGCCTTTCCTTGCCCGCCGCCGTCC GGCCTCAAAACTTTCCCCAGATGGATAATCATCGTGTTTGCGGGGATCCT GCTGGCATCCGCCTACAAGCTCTTCACGGAGCAGGACGGCGCCGACCACG ACCTGTCGGGAAACGGCGTTGTCAAGCTGGCGAAGCGCCTCGTAGGTGCG GTCGACAGTTACGATGGCGATCGCTTCTTCGCGGCGCCCGACGTCAGCGG CGGCCGGCGCGTCGCGACGCCGCTGCTGCTGTGCCTGGTGTGCATCGAGC TCAGCGATTTTGTGTTCGCCGTTGACTCAATCCCGGCCGTGCTTGGTGTT AGTCAGGTGAGAGGGAGGGGAACGAGAAAGGCATATTTCGAATCTCATTT CAGAGGCTGACGGCAGTGGTAGATTACTTGTTTGGGACCGGTCGGGACCG GAATTGCTTGCCGGCAAACTCTTGTGCAGCTTAAAACTTAGTTGGGTACG GCAAGGTTGAGTATGGCAATCGGTACCTTTAGAGCCGGCACACGGCTTCA TAGCTTGTTTTTGTAGATTCGGCGGAGCATCTTATTCATTCTTACGCTGC ATCAATGGGTTGTAATGCGTCGATGAGAAGGAGGAGCGTTTCAGGGAAGG TTGGTCTCTTCAATCCTTGCCTCTCCATTTGCTGCCAACGCCGTATGCAT CCAATTCCAGGACCCTTTCATAGTCTACTCCAGCAACATCTTCGCCATAA TGGGGCTGCGCAGCATCTACACCATCATCAACCGTGCCGTGCAACAGCTG CCCTACCTCAAGCCGGCCGTCGCTGCCGTCCTCGGCTTCGTCGGAACCAA AATGCTACTCGAGTTCGCCCACATCGTCATCGGCACGGGGCTCTCGCTGG CCATCGTCGTGTTTCTGCTGGCGGGGGGCGTTTTGCTGAGCATCTTCGAG CGCGGGTGGCCCATGGGGCAGAAGCGCAAGAACAGCGACTCAGATGCGGA GGACAGCGGCGACCTCATTGTCTGACACGAGCGGGAACGAGACGGAAACG GAGAGAATGGAAGGGAAAGGGGCCTTCTGCTGCCCGTTCCGTTCCGCTCC GCTCCGCTCCGGCGGCATGCGCGGGCGGTTAAGATGCAGCAACCAGGTCT CATCCCTGATCACTCAAAAGAATTGTTTTACTGTGTCTCCTCTCTCATGG GCCAAAGGAGCGGCGGTTCGCCAGGGACAGCTGAAAGGAGGAAAAGGATG GCGTAAAAGTACGGTGCCGAGAAGCCTCAGAATTTCCCGGCAGCCATGAA TGACTGATGCTAGACTAAATACTAGTAGCTGGCAAATGAATACCGGGACG ACACACACCTAAGCAAGGCTTTGGGAGAAAAGGTGTAAACTGAGTTATAG ACGTGGTCCTGTCCGTTCTGCTCCAGACACAATCAACTTCTTACTCGGA
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig167:4013..6561-

>mRNA_P-wetherbeei_contig167.1.1 ID=mRNA_P-wetherbeei_contig167.1.1|Name=mRNA_P-wetherbeei_contig167.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=843bp|location=Sequence derived from alignment at P-wetherbeei_contig167:4013..6561- (Phaeothamnion wetherbeei SAG_119_79)
ATGATCTTTGGCATTTTCGTATTGCTCGTCAAAGGACGACAATCAGGAAT
GGAATTCTACGCTGCATATATAGTCGAGCAAAGTCTCAGTGTCGACAATC
TCTTCGTTTTTCTGATGTTATTTGAGTACTTTTCCGTGCCGTTGGAGTTC
CAGGGGCGGGTGCTCACGTGGGGCATTATCGGAGCTATCGTCATGAGGGG
CATCATGATTGCGGCCGGCGTGGTGGTGGTGAAATCATTTAGATGGATAA
TCATCGTGTTTGCGGGGATCCTGCTGGCATCCGCCTACAAGCTCTTCACG
GAGCAGGACGGCGCCGACCACGACCTGTCGGGAAACGGCGTTGTCAAGCT
GGCGAAGCGCCTCGTAGGTGCGGTCGACAGTTACGATGGCGATCGCTTCT
TCGCGGCGCCCGACGTCAGCGGCGGCCGGCGCGTCGCGACGCCGCTGCTG
CTGTGCCTGGTGTGCATCGAGCTCAGCGATTTTGTGTTCGCCGTTGACTC
AATCCCGGCCGTGCTTGGTGTTAGTCAGGACCCTTTCATAGTCTACTCCA
GCAACATCTTCGCCATAATGGGGCTGCGCAGCATCTACACCATCATCAAC
CGTGCCGTGCAACAGCTGCCCTACCTCAAGCCGGCCGTCGCTGCCGTCCT
CGGCTTCGTCGGAACCAAAATGCTACTCGAGTTCGCCCACATCGTCATCG
GCACGGGGCTCTCGCTGGCCATCGTCGTGTTTCTGCTGGCGGGGGGCGTT
TTGCTGAGCATCTTCGAGCGCGGGTGGCCCATGGGGCAGAAGCGCAAGAA
CAGCGACTCAGATGCGGAGGACAGCGGCGACCTCATTGTCTGA
back to top