mRNA_P-wetherbeei_contig1668.1.4 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1668.1.4
Unique NamemRNA_P-wetherbeei_contig1668.1.4
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1668.1.4 vs. uniprot
Match: A0A836CJG7_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJG7_9STRA)

HSP 1 Score: 172 bits (435), Expect = 9.260e-48
Identity = 115/292 (39.38%), Postives = 160/292 (54.79%), Query Frame = 1
Query:    1 LTYMIDVPDGRNTRQKVLLQDVSFRCLPGRLVGILGASGAGESSRLRVPLISRFLVGRMAGSILFNGHMRGPALLRDTAYIQQDVLLFPELT---------------------VRESVNYAARLRMPRGTPAAARAARVNGVLKMLHLSGCAQSPVGDALRRGISGGQRRRLSIAMEVVALPSLICLDEISTGLDSATALSVFASVHALVRPGPGAGCG--------------------RTALATVHQPGPALFASFDEVALLHGGRLLFFGPPAAAESYFLRLGFVRPRGK 753
            L+Y I     R+  +K+LL D+SF   PG +V ++GASGAG+S+ L + +  R   G +AG+I FNG +    +LR +AYI+Q+++L    T                     VRE++++AA+LR+P    A  R ARV  +  ML L  C  S VGDAL RGISGGQ +RLSI  E++A+P L+ LDE ++GLDSA +L + AS+  L  P     C                      T +AT+HQP P +F+ FD+V LL GGR ++FGP A    YF  L    P GK
Sbjct:   96 LSYAIQT---RDRSRKLLLHDISFEARPGEMVAVMGASGAGKSTLLDL-IAGRKQEGFVAGTIAFNGELLTNQILRCSAYIEQNIVLLAAFTYCIRXXXXXXXXXXXXXXXXTVRETLHFAAQLRLPESLSAQQRHARVGQIAAMLGLQECMDSVVGDALTRGISGGQMKRLSIGTEIIAVPPLLFLDEPTSGLDSAVSLGIAASLRRLA-PRLSTTCXXXXXXXXXXXXXXXXXTAQHHTIMATIHQPSPEVFSQFDKVLLLLGGREVYFGPVAHCHKYFSSL----PLGK 378          
BLAST of mRNA_P-wetherbeei_contig1668.1.4 vs. uniprot
Match: A0A1V9YIE8_9STRA (ATP-binding Cassette (ABC) Superfamily n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YIE8_9STRA)

HSP 1 Score: 172 bits (435), Expect = 5.470e-46
Identity = 107/251 (42.63%), Postives = 148/251 (58.96%), Query Frame = 1
Query:   22 PDGRNTRQKVLLQDVSFRCLPGRLVGILGASGAGESSRLRVPLISRFLVGRMAGSILFNGHMRGPALLRDTAYIQQDVLLFPELTVRESVNYAARLRMPRGTPAAARAARVNGVLKMLHLSGCAQSPVGDALRRGISGGQRRRLSIAMEVVALPSLICLDEISTGLDSATALSVFASVHALVRPGPGAGCGRTALATVHQPGPALFASFDEVALLHGGRLLFFGPPAAAESYFLRLGFVRPRGKDVADFII 774
            P  +    K +L++V    LPG+ + ++G SGAG+SS L + L  R  VG   GS+  NGH    AL + + Y+ QD + +  LTV+E + Y A LRM   T A+ R ARV+ VL  L LS CA S +G+A  RGISGG+R+RLS+A E++  PS++ +DE ++GLDS  A SV   +  L      A  G T +AT+HQP   +FA FD + LL GG  ++FGP A A  YF   G V P   + ADF +
Sbjct:   42 PSTKQAESKTILRNVRGSALPGQFITLMGPSGAGKSSLLDI-LSGR--VGGFDGSVTVNGHPWTTALTQCSCYVMQDDVFYHTLTVKEHLLYQADLRMDPQTSASQRVARVDTVLHQLGLSSCADSYIGNASIRGISGGERKRLSLATELLTNPSILFIDEPTSGLDSTMAESVVLELQRL------AARGHTVIATIHQPSSQIFALFDRLLLLTGGETVYFGPAAEAVEYFSARGLVCPGYVNPADFFM 283          
BLAST of mRNA_P-wetherbeei_contig1668.1.4 vs. uniprot
Match: A0A0D2VWT6_CAPO3 (ABC transporter domain-containing protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2VWT6_CAPO3)

HSP 1 Score: 171 bits (434), Expect = 2.690e-45
Identity = 94/260 (36.15%), Postives = 156/260 (60.00%), Query Frame = 1
Query:    1 LTYMIDVPDGRNTRQKVLLQDVSFRCLPGRLVGILGASGAGESSRLRVPLISRFLVGRMAGSILFNGHMRGPALLRDTAYIQQDVLLFPELTVRESVNYAARLRMPRGTPAAARAARVNGVLKMLHLSGCAQSPVGDALRRGISGGQRRRLSIAMEVVALPSLICLDEISTGLDSATALSVFASVHALVRPGPGAGCGRTALATVHQPGPALFASFDEVALLHGGRLLFFGPPAAAESYFLRLGFVRPRGKDVADFIIAV 780
            LTY +     +    K +L++ +   +PG+++ I+G SGAG+++ L V L  R + G++ G I  NGH R  +  R +AY++QD L+FP LT +E++ +AA LRMP       +  R   +++ L LS C  + +G   R+G+SGG+R+R++IA+E++  P L+ LDE ++GLD+ TA  V  +V A+ + G      R  + T+HQP   ++A FD++ LL  G  +F+GP   A SYF +LG+  P   + +DF + +
Sbjct:  130 LTYSVTEVRKKEKIVKEILKEQTGAVMPGQMIAIMGTSGAGKTTLLNV-LAGRNITGQIGGFIALNGHARNKSFRRQSAYVEQDDLMFPNLTTKETITFAALLRMPSKYTTQDKIQRAMDLIRQLGLSQCVNTRIGGPERKGVSGGERKRIAIAVELITNPKLLFLDEPTSGLDAFTAFHVMETVRAVAKGG------RAVVCTIHQPRYNIYALFDKLLLLSQGAPVFYGPALDAVSYFSKLGYECPPLTNCSDFFLDI 382          
BLAST of mRNA_P-wetherbeei_contig1668.1.4 vs. uniprot
Match: A0A1B6PQF9_SORBI (ABC transporter domain-containing protein n=6 Tax=Andropogoneae TaxID=147429 RepID=A0A1B6PQF9_SORBI)

HSP 1 Score: 170 bits (430), Expect = 4.740e-45
Identity = 101/256 (39.45%), Postives = 149/256 (58.20%), Query Frame = 1
Query:   22 PDGRNTRQKVLLQDVSFRCLPGRLVGILGASGAGESSRLRVPLISRFLVGRMAGSILFNGHMRGPALLRDTAYIQQDVLLFPELTVRESVNYAARLRMPRGTPAAARAARVNGVLKMLHLSGCAQSPVGDALRRGISGGQRRRLSIAMEVVALPSLICLDEISTGLDSATALSVFASVHALVRPGPGAGCGRTALATVHQPGPALFASFDEVALLHGGRLLFFGPPAAAESYFLRLGFVRPRGKDVADFIIAVAAG 789
            P      ++ +L+ ++    PG ++ +LG SG+G+S+ L + L  R L GR  G++L  G     A+ R T ++ QD +L P LTVRE++ + A LR+PR  P AA+AA    V+  L LS CA + VG+A  RG+SGG+R+R+SI  E++  PSL+ LDE ++GLDS  A  + A++ AL R G      RT + +VHQP   ++  FD V LL  G  L+FG    A  YF   GF      + ADF++ +A G
Sbjct:   85 PASSAAEERTILKGITGEARPGEVLAVLGPSGSGKSTLLSI-LGGRRLAGRHTGTVLAGGRAPCRAVQRRTGFVAQDDVLHPHLTVRETLTFCAMLRLPRSAPGAAKAAAAEAVIAELGLSACADTIVGNAFVRGVSGGERKRVSIGHELLVNPSLLVLDEPTSGLDSTAAARLVATLSALARRG------RTVVLSVHQPSSRVYRMFDSVLLLADGSCLYFGAGRDAMDYFASAGFAPGFHVNPADFMLDLANG 333          
BLAST of mRNA_P-wetherbeei_contig1668.1.4 vs. uniprot
Match: A0A4P9ZT49_9FUNG (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Dimargaris cristalligena TaxID=215637 RepID=A0A4P9ZT49_9FUNG)

HSP 1 Score: 170 bits (430), Expect = 4.950e-45
Identity = 100/250 (40.00%), Postives = 154/250 (61.60%), Query Frame = 1
Query:   31 RNTRQKVLLQDVSFRCLPGRLVGILGASGAGESSRLRVPLISRFLVGRMAGSILFNGHMRGPALLR-DTAYIQQDVLLFPELTVRESVNYAARLRMP-RGTPAAARAARVNGVLKMLHLSGCAQSPVGDALRRGISGGQRRRLSIAMEVVALPSLICLDEISTGLDSATALSVFASVHALVRPGPGAGCGRTALATVHQPGPALFASFDEVALLHGGRLLFFGPPAAAESYFLRLGFVRPRGKDVADFII 774
            R T  + LL ++S    PG +V I+G+SGAG+S+ L   L  R   G ++G +L+ G  R P L +   AY++QD LL+PELTV+E++ YAA +++P R   A ++A RVN V++ L L+    + +GD++ RG+SGG+R+R +I +E+V  P  + LDE ++GLDS +AL V   V +L R           L T+HQP   +F  FD+V LL  G +++ GP A +  YF RLG+V  + ++ ADF +
Sbjct:   60 RATESRTLLNNISGAVAPGEMVAIMGSSGAGKSTLLNA-LAGRLQTGTLSGQVLYKGVKRDPRLFKKQVAYVEQDDLLYPELTVKETIQYAATMKLPSRDFSAESKARRVNDVIEWLRLTETTDTMIGDSMARGVSGGERKRTAIGVELVTDPGFLFLDEATSGLDSNSALHVCEVVKSLCRARH-----IGVLMTIHQPSAKIFNLFDKVILLCKGDVVYAGPVAESVDYFARLGYVCAQHENPADFFL 303          
BLAST of mRNA_P-wetherbeei_contig1668.1.4 vs. uniprot
Match: A0A0D6R4J2_ARACU (ABC transporter domain-containing protein n=1 Tax=Araucaria cunninghamii TaxID=56994 RepID=A0A0D6R4J2_ARACU)

HSP 1 Score: 166 bits (420), Expect = 5.170e-45
Identity = 96/253 (37.94%), Postives = 150/253 (59.29%), Query Frame = 1
Query:   31 RNTRQKVLLQDVSFRCLPGRLVGILGASGAGESSRLRVPLISRFLVGRMAGSILFNGHMRGPALLRDTAYIQQDVLLFPELTVRESVNYAARLRMPRGTPAAARAARVNGVLKMLHLSGCAQSPVGDALRRGISGGQRRRLSIAMEVVALPSLICLDEISTGLDSATALSVFASVHALVRPGPGAGCGRTALATVHQPGPALFASFDEVALLHGGRLLFFGPPAAAESYFLRLGFVRPRGKDVADFIIAVAAG 789
            R   +K +L  V+    PG ++ +LG SG+G+++ L    +   L G+++GSILFNG   G ++ R T ++ QD +L+  LTVRE++ YAA LR+PR      +   V+ ++  L L+ C  + +G  L RG+SGG+R+R+SI  E++  PSL+ LDE ++GLDS TA  +  ++  L R G      RT + T+HQP   LF  F +V LL  G L+++G  +AA  YF  +GF      + ADF++ +A G
Sbjct:  129 RQAVEKTILNGVTGMVCPGEILAMLGPSGSGKTTLLSA--LGGRLEGKVSGSILFNGKRFGKSMKRKTGFVTQDDVLYSHLTVRETLVYAALLRLPRALSRQEKREHVDAIIGELGLTRCRNTIIGGPLLRGVSGGERKRVSIGQEMLTNPSLLLLDEPTSGLDSTTAQRIIVTLRNLARGG------RTIITTIHQPSSRLFYMFHKVILLSEGNLIYYGEASAAMDYFPSIGFAPSYPMNPADFMLDLANG 373          
BLAST of mRNA_P-wetherbeei_contig1668.1.4 vs. uniprot
Match: A0A0L0DSB8_THETB (ABC transporter domain-containing protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DSB8_THETB)

HSP 1 Score: 172 bits (435), Expect = 6.270e-45
Identity = 102/245 (41.63%), Postives = 144/245 (58.78%), Query Frame = 1
Query:   40 RQKVLLQDVSFRCLPGRLVGILGASGAGESSRLRVPLISRFLVGRMAGSILFNGHMRGPALLRDTAYIQQDVLLFPELTVRESVNYAARLRMPRGTPAAARAARVNGVLKMLHLSGCAQSPVGDALRRGISGGQRRRLSIAMEVVALPSLICLDEISTGLDSATALSVFASVHALVRPGPGAGCGRTALATVHQPGPALFASFDEVALLHGGRLLFFGPPAAAESYFLRLGFVRPRGKDVADFII 774
            + K +L+  S  C PG +  I+G SGAG+S+ L V L  R     M+G +L NG  R  A  R   Y+ QD  L P LTVRE++N+ A+LR+     AA R ARV  V+  L L+  A S +GD L RGISGG+RRR+SIA E+V  P ++ LDE ++GLDS TA ++ A++  L           T + ++HQP  +++ASFD + LL  G  L+ G  A A  +F +LG   P+  + ADF+I
Sbjct: 1094 KDKTILRSASGYCAPGTVTAIMGPSGAGKSTLLNV-LAGRISFSDMSGQVLVNGQPRSTAFKRIAGYVTQDDFLIPTLTVRETLNFHAQLRLGNSVSAATRVARVEKVIAQLELTHVADSRIGDRLIRGISGGERRRVSIATELVTSPRILFLDEPTSGLDSCTASAIMATLRELAT-----SSALTVILSIHQPRSSIYASFDNLILLSKGSTLYNGRAAGATGHFAQLGHPCPQDFNPADFLI 1332          
BLAST of mRNA_P-wetherbeei_contig1668.1.4 vs. uniprot
Match: W7TH06_9STRA (Atp-binding cassette superfamily n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TH06_9STRA)

HSP 1 Score: 171 bits (433), Expect = 1.030e-44
Identity = 108/251 (43.03%), Postives = 150/251 (59.76%), Query Frame = 1
Query:   43 QKVLLQDVSFRCLPGRLVGILGASGAGESSRLRVPLISRFLVGRMAGSILFNGHMRGPALLRDTAYIQQDVLLFPELTVRESVNYAARLRMPRGTPAAARAARVNGVLKMLHLSGCAQSPVGDALRRGISGGQRRRLSIAMEVVALPSLICLDEISTGLDSATALSVFASVHALVRPGPGAGCGRTALATVHQPGPALFASFDEVALLHGGRLLFFGPPAAAESYFLRLGFVRPRGKDVADFIIAVAAGAE 795
            +K LL+ ++   LPG +  ++G SGAG+S+ L   L  R   G M+G I FNG  R      ++AY++QD +  P LTV E++ +AA+LR+        R +R+  V  +L L+ C  S VGDA  RGISGGQ +RLSIA+E++ +PSLI LDE ++GLDS  A  V    + L      A   RT LAT+HQP    +A   +V L+  GR++F GP   A+SYF+ LGF      + ADFIIAV +GAE
Sbjct:   27 RKELLKHITMTVLPGEIAFVMGPSGAGKSTLLDA-LAGRIKDGVMSGHIYFNGRPRSSDFYSNSAYVRQDDVHIPNLTVGETLFFAAQLRLGGEYTINERQSRIKAVSDLLGLNSCILSLVGDAGMRGISGGQLKRLSIAVEIMNMPSLIFLDEPTSGLDSVMAHDVMTFTNRL------ADQNRTILATIHQPSSETYALASKVILVSAGRIMFCGPANEAQSYFISLGFSAQMFGNPADFIIAVVSGAE 270          
BLAST of mRNA_P-wetherbeei_contig1668.1.4 vs. uniprot
Match: A0A1Y2C724_9FUNG (p-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2C724_9FUNG)

HSP 1 Score: 168 bits (426), Expect = 1.120e-44
Identity = 104/269 (38.66%), Postives = 157/269 (58.36%), Query Frame = 1
Query:    1 LTYMIDVPDGRNTRQKVLLQDVSFRCLPGRLVGILGASGAGESSRLRVPLISRFLVGRMA--------GSILFNGHMRGPALLRDT-AYIQQDVLLFPELTVRESVNYAARLRMPRGTPAAARAARVNGVLKMLHLSGCAQSPVGDALRRGISGGQRRRLSIAMEVVALPSLICLDEISTGLDSATALSVFASVHALVRPGPGAGCGRTALATVHQPGPALFASFDEVALLHGGRLLFFGPPAAAESYFLRLGFVRPRGKDVADFIIAV 780
            +TY+  VP G+    K LL + S     G++V I+G SGAG+S+ L        L GR+A        G IL NG  R P    +T +Y++QD L+F  L+V E++ YAA+LR+P   PA  +  +VN ++  L+L+GC ++ +GD+L RGISGG+R+R+SI +E+V  P ++ LDE ++GLDSA +L +  ++  L         G   L T+HQP   +   FD++ LL  G+ L+FGP  AA  +F  LGF  P   + +DF + V
Sbjct:   24 VTYI--VPYGKKGETKTLLDNASGYVRQGQVVAIMGGSGAGKSTLLNT------LAGRIADQKGSELRGEILLNGEPRNPGSWTNTCSYVEQDDLMFTNLSVEETLTYAAKLRLPSSMPAKEKEEKVNEIIMQLNLNGCRKTWIGDSLSRGISGGERKRVSIGVELVTNPKILFLDEPTSGLDSANSLGILETIKKLA-----VSRGMIVLMTIHQPRTEILELFDKILLLSLGKTLWFGPTNAALEHFNDLGFPLPPKTNPSDFFMDV 279          
BLAST of mRNA_P-wetherbeei_contig1668.1.4 vs. uniprot
Match: A0A2V0NRS2_9CHLO (ABC transporter Adp1 n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NRS2_9CHLO)

HSP 1 Score: 170 bits (431), Expect = 2.090e-44
Identity = 108/260 (41.54%), Postives = 150/260 (57.69%), Query Frame = 1
Query:   25 DGRNTRQKVLLQDVSFRCLPGRLVGILGASGAGESSRLRVPLISRFLVG---RMAGSILFNGHMRGPALLRDTAYIQQDVLLFPELTVRESVNYAARLRMPRGTPAAARAARVNGVLKMLHLSGCAQSPVG-DALRRGISGGQRRRLSIAMEVVALPSLICLDEISTGLDSATALSVFASVHALVRPGPGAGCGRTALATVHQPGPALFASFDEVALLHGGRLLFFGPPAAAESYFLRLGFVRPRGKDVADFIIAVAAGA 792
            D    RQKVLL  VS     G +VG++G SGAG+S+ L +   +   VG   R+ G++   G  R  AL + TA++ Q  +L P LTV E V Y+A LR+PR   A     R+NGVL  L LS  A S VG  A  RG+SGG+RRR++IAM +V  P L+ +DE ++GLDS TA ++  + H +      AG GR  + ++HQP P +F S  +V LL  GRL + GPP+    YF   G   P G+  A+ ++ VA+ A
Sbjct:  713 DAEGRRQKVLLHGVSGSIAEGEVVGVMGPSGAGKSTLLSILSGATESVGAGARVEGAVTLGGEARRSALRKITAFVPQRDVLLPALTVEECVRYSALLRLPRSLAAEEVQERINGVLSELGLSHVAASLVGGSASIRGVSGGERRRVTIAMALVTRPRLVIMDEPTSGLDSYTACNLMRTAHDI------AGHGRVVVMSLHQPSPDMFDSLTQVLLLAKGRLAYLGPPSGVAPYFAAAGHPAPAGRQPAEHMLHVASQA 966          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1668.1.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CJG7_9STRA9.260e-4839.38P-loop containing nucleoside triphosphate hydrolas... [more]
A0A1V9YIE8_9STRA5.470e-4642.63ATP-binding Cassette (ABC) Superfamily n=1 Tax=Ach... [more]
A0A0D2VWT6_CAPO32.690e-4536.15ABC transporter domain-containing protein n=1 Tax=... [more]
A0A1B6PQF9_SORBI4.740e-4539.45ABC transporter domain-containing protein n=6 Tax=... [more]
A0A4P9ZT49_9FUNG4.950e-4540.00P-loop containing nucleoside triphosphate hydrolas... [more]
A0A0D6R4J2_ARACU5.170e-4537.94ABC transporter domain-containing protein n=1 Tax=... [more]
A0A0L0DSB8_THETB6.270e-4541.63ABC transporter domain-containing protein n=1 Tax=... [more]
W7TH06_9STRA1.030e-4443.03Atp-binding cassette superfamily n=1 Tax=Nannochlo... [more]
A0A1Y2C724_9FUNG1.120e-4438.66p-loop containing nucleoside triphosphate hydrolas... [more]
A0A2V0NRS2_9CHLO2.090e-4441.54ABC transporter Adp1 n=1 Tax=Raphidocelis subcapit... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1668contigP-wetherbeei_contig1668:273..1435 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog529818.AMSG_10348T0
PFAMsABC2_membrane,ABC_tran
Model size804
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006869,GO:0008150,GO:0009653,GO:0010876,GO:0015399,GO:0015405,GO:0015850,GO:0015918,GO:0016020,GO:0016021,GO:0016324,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0030301,GO:0030587,GO:0031154,GO:0031224,GO:0031288,GO:0032502,GO:0032991,GO:0033036,GO:0033344,GO:0042623,GO:0042626,GO:0043235,GO:0043492,GO:0044425,GO:0044459,GO:0044464,GO:0045177,GO:0048856,GO:0051179,GO:0051234,GO:0051703,GO:0051704,GO:0055085,GO:0071702,GO:0071944,GO:0090702,GO:0098590,GO:0099120
Exons3
Evalue9.31e-46
EggNOG OGsCOG1131@1|root,KOG0061@2759|Eukaryota
DescriptionATPase activity, coupled to transmembrane movement of substances
Cds size795
COG categoryV
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186093.9890854-CDS-P-wetherbeei_contig1668:272..5391683186093.9890854-CDS-P-wetherbeei_contig1668:272..539Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1668 273..539 -
1683186094.0006883-CDS-P-wetherbeei_contig1668:671..10401683186094.0006883-CDS-P-wetherbeei_contig1668:671..1040Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1668 672..1040 -
1683186094.0083659-CDS-P-wetherbeei_contig1668:1267..14261683186094.0083659-CDS-P-wetherbeei_contig1668:1267..1426Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1668 1268..1426 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186094.0159173-UTR-P-wetherbeei_contig1668:1426..14351683186094.0159173-UTR-P-wetherbeei_contig1668:1426..1435Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1668 1427..1435 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1668.1.4prot_P-wetherbeei_contig1668.1.4Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1668 273..1426 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1668.1.4

>prot_P-wetherbeei_contig1668.1.4 ID=prot_P-wetherbeei_contig1668.1.4|Name=mRNA_P-wetherbeei_contig1668.1.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=265bp
MIDVPDGRNTRQKVLLQDVSFRCLPGRLVGILGASGAGESSRLRVPLISR
FLVGRMAGSILFNGHMRGPALLRDTAYIQQDVLLFPELTVRESVNYAARL
RMPRGTPAAARAARVNGVLKMLHLSGCAQSPVGDALRRGISGGQRRRLSI
AMEVVALPSLICLDEISTGLDSATALSVFASVHALVRPGPGAGCGRTALA
TVHQPGPALFASFDEVALLHGGRLLFFGPPAAAESYFLRLGFVRPRGKDV
ADFIIAVAAGAEEVC
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mRNA from alignment at P-wetherbeei_contig1668:273..1435-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1668.1.4 ID=mRNA_P-wetherbeei_contig1668.1.4|Name=mRNA_P-wetherbeei_contig1668.1.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1163bp|location=Sequence derived from alignment at P-wetherbeei_contig1668:273..1435- (Phaeothamnion wetherbeei SAG_119_79)
CTCACATATATGATAGACGTTCCGGACGGCAGGAACACTCGCCAAAAAGT CCTCCTTCAAGACGTGTCTTTTCGCTGCCTTCCCGGCCGCCTGGTCGGCA TCCTTGGGGCATCGGGCGCCGGTGAGTCCTCCCGCCTTCGTGTTCCCTTG ATTTCGCGTTTTTTAGTTGTTCATCCCTTCCTTCATCGCATCCCCTTTTC CACCCTACTCACTCTTTATCACAGGCAAAAGCACGACCCTGGACCTCGTG GCGGGACGCAAGCTGGAAGTGGGTCTAGTCAGCTTGCAGCTGCGCGTCTG GTCCCAATCCGGCTCAGCTACGCACAACTTTTCCAGCGAAAAACTGCTTT TCCTCACTTGCATTCGTTTTGCGTCTTCCCCGCTGACCAGTGCAGGGCCG TATGGCCGGAAGCATTCTCTTCAATGGGCATATGCGGGGCCCGGCTCTCC TCCGCGACACGGCGTACATTCAGCAGGACGTCCTGCTCTTCCCCGAGCTC ACAGTGCGCGAATCGGTGAACTACGCTGCCCGTCTGCGGATGCCCCGCGG GACCCCGGCGGCGGCGCGGGCGGCGCGGGTCAACGGTGTGCTCAAGATGC TCCACCTGAGCGGCTGCGCGCAGTCGCCGGTTGGGGACGCGCTCCGGCGT GGCATCTCTGGCGGGCAGCGGCGGCGGCTGTCGATCGCGATGGAGGTCGT GGCGCTGCCGTCGCTCATCTGCCTCGACGAGATTAGCACAGGGCTCGACA GCGCGACCGCCCTCGTGAGTTGGTCAGAACTTTTGTTGCGCACGTCTTTT CCGTGGTGTATTATGATTGCGGATTGCGGGGACGTTGTTTTGTAGTTGCC TCTTCACTCCCTTTTTGTCTATTTGTCGTTTCCTTTTCGTTGGCAGTCGG TGTTCGCGTCTGTGCACGCGCTCGTCCGCCCGGGACCCGGCGCCGGATGC GGCCGGACAGCTCTGGCGACCGTGCACCAGCCCGGCCCCGCCCTCTTCGC GTCGTTCGACGAGGTGGCACTCCTGCACGGCGGTCGGCTCCTCTTCTTCG GCCCGCCGGCCGCGGCCGAGTCCTACTTTCTGCGGCTCGGGTTCGTGCGG CCGCGGGGAAAGGACGTGGCGGATTTCATCATTGCGGTCGCTGCAGGCGC GGAGGAGGTTTGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1668:273..1435-

>mRNA_P-wetherbeei_contig1668.1.4 ID=mRNA_P-wetherbeei_contig1668.1.4|Name=mRNA_P-wetherbeei_contig1668.1.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=795bp|location=Sequence derived from alignment at P-wetherbeei_contig1668:273..1435- (Phaeothamnion wetherbeei SAG_119_79)
ATGATAGACGTTCCGGACGGCAGGAACACTCGCCAAAAAGTCCTCCTTCA
AGACGTGTCTTTTCGCTGCCTTCCCGGCCGCCTGGTCGGCATCCTTGGGG
CATCGGGCGCCGGTGAGTCCTCCCGCCTTCGTGTTCCCTTGATTTCGCGT
TTTTTAGTTGGCCGTATGGCCGGAAGCATTCTCTTCAATGGGCATATGCG
GGGCCCGGCTCTCCTCCGCGACACGGCGTACATTCAGCAGGACGTCCTGC
TCTTCCCCGAGCTCACAGTGCGCGAATCGGTGAACTACGCTGCCCGTCTG
CGGATGCCCCGCGGGACCCCGGCGGCGGCGCGGGCGGCGCGGGTCAACGG
TGTGCTCAAGATGCTCCACCTGAGCGGCTGCGCGCAGTCGCCGGTTGGGG
ACGCGCTCCGGCGTGGCATCTCTGGCGGGCAGCGGCGGCGGCTGTCGATC
GCGATGGAGGTCGTGGCGCTGCCGTCGCTCATCTGCCTCGACGAGATTAG
CACAGGGCTCGACAGCGCGACCGCCCTCTCGGTGTTCGCGTCTGTGCACG
CGCTCGTCCGCCCGGGACCCGGCGCCGGATGCGGCCGGACAGCTCTGGCG
ACCGTGCACCAGCCCGGCCCCGCCCTCTTCGCGTCGTTCGACGAGGTGGC
ACTCCTGCACGGCGGTCGGCTCCTCTTCTTCGGCCCGCCGGCCGCGGCCG
AGTCCTACTTTCTGCGGCTCGGGTTCGTGCGGCCGCGGGGAAAGGACGTG
GCGGATTTCATCATTGCGGTCGCTGCAGGCGCGGAGGAGGTTTGC
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