mRNA_P-wetherbeei_contig16679.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig16679.1.1
Unique NamemRNA_P-wetherbeei_contig16679.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig16679.1.1 vs. uniprot
Match: A0A2D7F7W6_9HYPH (Lipase_3 domain-containing protein n=2 Tax=Hyphomicrobiaceae TaxID=45401 RepID=A0A2D7F7W6_9HYPH)

HSP 1 Score: 135 bits (339), Expect = 2.290e-33
Identity = 89/228 (39.04%), Postives = 122/228 (53.51%), Query Frame = 1
Query:    1 PLQFCEFLAYKTALAYESEDRIRTYLTK-YCQGISRIVFFDSGGGRTLADAQGYGFVFEQKAFVIFRGTE--SDNDWVINRTDALTDTLQNPNDNRRKKLVARYGDLLAKTGDPSPGRHAGFAIAWASIKDDVERWLKDVLDTGDAMSIIYSGHSLGGAMALLGAFDHARE--------HKPHWISGVVTFGAPLVGGAAFVEAYKRELG--DRTVLLESSGDIVPAI 645
            PL   EFLAYK+ALAY     IR  L + +  GI+   FF++     +AD Q YGFV ++ A+VIFRGTE  +  DW  +     T  L    D R+     R G ++   G+  P RH GFAI W S++ D+ERWL  +++       ++SGHSLGGA+A L AF  A             + +  V+TFGAP VGG  F   Y+   G  DRT+ +E+S D V  +
Sbjct:  110 PLTLTEFLAYKSALAYYKPSVIRKNLYEDHPIGITDFKFFEAR--EEIADTQAYGFVLDETAYVIFRGTEFFTFQDWATDVDSIFTTHLS---DERK----VRDGPVI---GELDPPRHTGFAIGWGSVRPDIERWLDRLINERLIKRTVFSGHSLGGALAKLAAFHFAGHPDNLSNPYRNKYEVGAVITFGAPKVGGEEFKRQYEGIAGLKDRTIRVEASLDAVSLV 325          
BLAST of mRNA_P-wetherbeei_contig16679.1.1 vs. uniprot
Match: A0A176L992_9ACTN (Lipase n=5 Tax=Streptomyces TaxID=1883 RepID=A0A176L992_9ACTN)

HSP 1 Score: 73.6 bits (179), Expect = 3.380e-12
Identity = 55/171 (32.16%), Postives = 75/171 (43.86%), Query Frame = 1
Query:  139 LADAQGYGFVFEQKAFVIFRGTESDN--DWVINRTDALTDTLQNPNDNRRKKLVARYGDLLAKTGDPSPGRHAGFAIAWASIKDDVERWLKDVLDTGDAMSIIYSGHSLGGAMALLGAFDHAREHKPHWISGVVTFGAPLVGGAAFVEAYKRELGDRTVLLESSGDIVPAI 645
            L D Q Y    ++     FRGTE     DW+   TDA T  +  P                      S   H GFA A  S+ +DV   L+ +   G   ++ ++GHSLGGA+A+L       EH      G+ TFG P    AA  EA+ + LG RT    ++ DIVP +
Sbjct:   14 LQDTQAYTMAGDRMIVTAFRGTEPTRIKDWL---TDATTPPVAGPGG--------------------SGHVHHGFAEALRSVYEDVAAALEGLRTNGQ--TLYFTGHSLGGALAMLAGARMYLEHPHLAADGIYTFGQPRTCDAALAEAFHQGLGGRTYRFVNNNDIVPQL 159          
BLAST of mRNA_P-wetherbeei_contig16679.1.1 vs. uniprot
Match: A0A1S2P8T9_9ACTN (Lipase n=4 Tax=Streptomyces TaxID=1883 RepID=A0A1S2P8T9_9ACTN)

HSP 1 Score: 72.8 bits (177), Expect = 6.470e-12
Identity = 56/172 (32.56%), Postives = 74/172 (43.02%), Query Frame = 1
Query:  139 LADAQGYGFVFEQKAFVIFRGTESDN--DWVINRTDALTDTLQNPNDNRRKKLVARYGDLLAKTGDPSPGR-HAGFAIAWASIKDDVERWLKDVLDTGDAMSIIYSGHSLGGAMALLGAFDHAREHKPHWISGVVTFGAPLVGGAAFVEAYKRELGDRTVLLESSGDIVPAI 645
            L D Q Y    ++   + FRGTE     DW+   TD  T  +                     TG    G  H GFA A  S+  DVE  LK +    D  S+ ++GHSLGGA+A+L       E       G+ TFG P    A   EA+ + LG RT    ++ DIVP +
Sbjct:   14 LQDTQAYTMAGDRMIVIAFRGTEPTQIKDWL---TDVSTPPV---------------------TGPGGSGHVHHGFAEALRSVYPDVETTLKGLRT--DGQSLYFTGHSLGGALAMLAGARMYLEEPNLAADGIYTFGQPRTCDAVLAEAFHQGLGGRTYRFVNNNDIVPQL 159          
BLAST of mRNA_P-wetherbeei_contig16679.1.1 vs. uniprot
Match: W4H032_9STRA (Lipase_3 domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H032_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 1.190e-11
Identity = 52/171 (30.41%), Postives = 85/171 (49.71%), Query Frame = 1
Query:  172 EQKAFVIFRGTESDNDWVIN----RTDALTDTLQNPNDNRRKKL----VARYGDLLAKTGDPSPGRHAGFAIAWASIKDDVERWLKDVLDTGDAMSIIYSGHSLGGAMALLGAFDHAREHKPHWISGVVTFGAPLVGGAAFVEAYKREL-GDRTVLLESSGDIVPAIMRRW 657
            +++  V FRG+ S   W  N    +      +LQ  N + R+        R+   +       P  H+GF  A+A+++ D++  L+ +LD    +++  +GHS+GGA+A+L A+D AR+        +  FG P VG  AFV  Y R +     V+L+  GD+V  I R W
Sbjct:  629 KKRLVVAFRGSVSKAHWKTNLRFHQVPLWIHSLQGFNRHSRRSTCNDRALRWASRVPVLNLALPRVHSGFWKAYAAVRSDLKETLRLLLDDHPDLTLYITGHSMGGALAVLAAYDCARQFNIAVC--MYNFGGPRVGNPAFVRQYNRAVPNSHRVVLD--GDLVAGIPRFW 795          
BLAST of mRNA_P-wetherbeei_contig16679.1.1 vs. uniprot
Match: UPI000D1C8806 (phospholipase A1-Igamma2, chloroplastic-like n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1C8806)

HSP 1 Score: 73.6 bits (179), Expect = 1.720e-11
Identity = 52/155 (33.55%), Postives = 78/155 (50.32%), Query Frame = 1
Query:  187 VIFRGTESDNDWVINRTDALTDTLQNPNDNRRKKLVARYGDLLAKTGDPSPGRHAGFAIAWASIKDDVERWLKDVLDTGDAMSIIYSGHSLGGAMALLGAFDHAREHKP--HWISGVVTFGAPLVGGAAFVEAYKRELGDRTVLLESSGDIVPAI 645
            V +RGT +  +W+ N  D L  T  +P D+  K +    G L   T  P PG  AG +     +  +++R +   L  G+ +SI ++GHSLGGA+ALL A+D      P  +    V TF AP VG   F      ELG + +   ++ D+VP +
Sbjct:  199 VAWRGTVTQLEWIENLKDLLRPTGLDPTDHNTKGVKVETGFLSIYTS-PVPGDQAGMSTR-QQLHSEIKRLVG--LYQGEQLSITFTGHSLGGALALLSAYDVTELGLPGSNTPVSVFTFSAPRVGNRGFKNRC-LELGLKVLQTRNAADLVPKV 348          
BLAST of mRNA_P-wetherbeei_contig16679.1.1 vs. uniprot
Match: M4BEG9_HYAAE (Lipase_3 domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BEG9_HYAAE)

HSP 1 Score: 73.6 bits (179), Expect = 2.190e-11
Identity = 52/161 (32.30%), Postives = 80/161 (49.69%), Query Frame = 1
Query:  175 QKAFVIFRGTESDNDWVIN-RTDALTDTLQNPNDNRRKKLVARYGDLLAKT---GDPSPGRHAGFAIAWASIKDDVERWLKDVLDTGDAMSIIYSGHSLGGAMALLGAFDHAREHKPHWISGVVTFGAPLVGGAAFVEAYKR--ELGDRTVLLESSGDIVP 639
            Q+  + FRGT S  +W  N R D     +++     RK  + +  D  AK        P  H GF IA+ SI+D+++  ++ +LD    +S+  +GHS+GGA+A+L A+D A          +  FG P VG  +F + Y     +  R V+    GDIVP
Sbjct:  677 QRLVISFRGTTSKENWKSNLRADQKVLWIRSRGLRWRKSCLEKMKDAAAKIPLLNMTLPRVHRGFWIAYESIRDELKDVIRLILDENPGVSVYVTGHSMGGALAVLAAYDLAVNFSIK--VNMYNFGGPRVGNPSFRQHYDSFVPMSFRVVM---DGDIVP 832          
BLAST of mRNA_P-wetherbeei_contig16679.1.1 vs. uniprot
Match: A0A225W1L2_9STRA (Lipase_3 domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225W1L2_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 3.000e-11
Identity = 51/167 (30.54%), Postives = 81/167 (48.50%), Query Frame = 1
Query:  175 QKAFVIFRGTESDNDWVIN-RTDALTDTLQNPNDNRRKKLVARYGDLLAKT---GDPSPGRHAGFAIAWASIKDDVERWLKDVLDTGDAMSIIYSGHSLGGAMALLGAFDHAREHKPHWISGVVTFGAPLVGGAAFVEAYKR--ELGDRTVLLESSGDIVPAIMRRW 657
            ++  + FRGT S  +W  N R D     +++     RK  + +  D+ AK        P  H GF IA+ SI+D+++   + +LD    +S+  +GHS+GGA+A++ A+D A          +  FG P VG  +F + Y        R V+    GDIVP   + W
Sbjct:  698 RRLVISFRGTTSKENWKSNLRADQKMLWIKSRGLRWRKSCLEKLRDVAAKIPLLNMALPRVHRGFWIAYESIRDELKEVTRLILDENPGISVYITGHSMGGALAVIAAYDFAVNFSIK--VNMYNFGGPRVGNPSFRQHYSSCVPTSYRVVM---DGDIVPGWPKFW 859          
BLAST of mRNA_P-wetherbeei_contig16679.1.1 vs. uniprot
Match: UPI000D1CCB45 (phospholipase A1-Igamma1, chloroplastic-like n=16 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1CCB45)

HSP 1 Score: 72.8 bits (177), Expect = 3.460e-11
Identity = 52/155 (33.55%), Postives = 78/155 (50.32%), Query Frame = 1
Query:  187 VIFRGTESDNDWVINRTDALTDTLQNPNDNRRKKLVARYGDLLAKTGDPSPGRHAGFAIAWASIKDDVERWLKDVLDTGDAMSIIYSGHSLGGAMALLGAFDHAREHKP--HWISGVVTFGAPLVGGAAFVEAYKRELGDRTVLLESSGDIVPAI 645
            V +RGT +  +W+ N  D L  T  +P D+  K +    G L   T  P PG  AG + A   +  +++R +   L  G+ +S+ ++GHSLGGA+ALL A+D      P  +    V TF AP VG   F      ELG + +   +  D+VP +
Sbjct:  187 VAWRGTVTQLEWIENLKDLLRPTGLDPTDHNTKGVKVETGFLSIYTS-PVPGDQAGMS-ARQQLHSEIKRLVG--LYQGEQLSMTFTGHSLGGALALLSAYDVTELGLPGSNTPVSVFTFSAPRVGNRGFKNRC-LELGLKVLQTRNGADLVPKV 336          
BLAST of mRNA_P-wetherbeei_contig16679.1.1 vs. uniprot
Match: A0A6A3MZY2_9STRA (Lipase_3 domain-containing protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3MZY2_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 3.620e-11
Identity = 53/171 (30.99%), Postives = 82/171 (47.95%), Query Frame = 1
Query:  163 FVFEQKAFVIFRGTESDNDWVIN-RTDALTDTLQNPNDNRRKKLVARYGDLLAKT---GDPSPGRHAGFAIAWASIKDDVERWLKDVLDTGDAMSIIYSGHSLGGAMALLGAFDHAREHKPHWISGVVTFGAPLVGGAAFVEAYKR--ELGDRTVLLESSGDIVPAIMRRW 657
            F   ++  + FRGT S  +W  N R D     +++     R+  + +  D+ AK        P  H GF IA+ SI+D ++   + +LD    +S+  +GHS+GGA+A+L A+D A          +  FG P VG  +F + Y R      R V+    GDIVP   + W
Sbjct:  376 FQDHRRLVISFRGTTSKENWRSNLRADQHVLWIKSRGLRWRRTCLEKVEDVAAKIPLLNMALPRVHRGFWIAYESIRDQLKEVTRLILDENPGVSVYITGHSMGGALAVLAAYDLAVNFSIK--VNMYNFGGPRVGNPSFRQHYDRCVPTSYRVVM---DGDIVPGWPKFW 541          
BLAST of mRNA_P-wetherbeei_contig16679.1.1 vs. uniprot
Match: A0A3M6VNX1_9STRA (Lipase_3 domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VNX1_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 4.040e-11
Identity = 53/167 (31.74%), Postives = 80/167 (47.90%), Query Frame = 1
Query:  175 QKAFVIFRGTESDNDWVIN-RTDALTDTLQNPNDNRRKKLVARYGDLLAKT---GDPSPGRHAGFAIAWASIKDDVERWLKDVLDTGDAMSIIYSGHSLGGAMALLGAFDHAREHKPHWISGVVTFGAPLVGGAAFVEAYKR--ELGDRTVLLESSGDIVPAIMRRW 657
            Q+  + FRGT S  +W  N R D     +++     RK  + +  D+ AK        P  H GF IA+ SI+D++    + +LD    +S+  +GHS+GGA+A+L A+D A          +  FG P VG  +F + Y        R V+    GDIVP   + W
Sbjct:  686 QRLVISFRGTTSKENWKSNLRADQKVLWIKSRGLRWRKSWLEKVKDVAAKIPLLNMALPRVHRGFWIAYESIRDELIEVTRLILDENPGVSVYVTGHSMGGALAVLAAYDLAVNFSIK--VNMYNFGGPRVGNPSFRQHYDSCVPTSYRVVM---DGDIVPGWPKFW 847          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16679.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2D7F7W6_9HYPH2.290e-3339.04Lipase_3 domain-containing protein n=2 Tax=Hyphomi... [more]
A0A176L992_9ACTN3.380e-1232.16Lipase n=5 Tax=Streptomyces TaxID=1883 RepID=A0A17... [more]
A0A1S2P8T9_9ACTN6.470e-1232.56Lipase n=4 Tax=Streptomyces TaxID=1883 RepID=A0A1S... [more]
W4H032_9STRA1.190e-1130.41Lipase_3 domain-containing protein n=2 Tax=Aphanom... [more]
UPI000D1C88061.720e-1133.55phospholipase A1-Igamma2, chloroplastic-like n=1 T... [more]
M4BEG9_HYAAE2.190e-1132.30Lipase_3 domain-containing protein n=1 Tax=Hyalope... [more]
A0A225W1L2_9STRA3.000e-1130.54Lipase_3 domain-containing protein n=1 Tax=Phytoph... [more]
UPI000D1CCB453.460e-1133.55phospholipase A1-Igamma1, chloroplastic-like n=16 ... [more]
A0A6A3MZY2_9STRA3.620e-1130.99Lipase_3 domain-containing protein n=1 Tax=Phytoph... [more]
A0A3M6VNX1_9STRA4.040e-1131.74Lipase_3 domain-containing protein n=1 Tax=Peronos... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16679contigP-wetherbeei_contig16679:290..991 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog102129.Lepto7375DRAFT_4627
PFAMsLipase_3
Model size702
Max annot lvl1117|Cyanobacteria
KEGG rclassRC00020,RC00037,RC00041,RC00094
KEGG koko:K01046
KEGG ReactionR02250,R02687
KEGG Pathwayko00561,ko01100,map00561,map01100
KEGG ModuleM00098
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.72e-15
EggNOG OGsCOG3675@1|root,COG3675@2|Bacteria,1GCRE@1117|Cyanobacteria
Ec32 ortholog descriptionEsV-1-185 lipase domain protein
Ec32 orthologEc-06_005070.1
EC3.1.1.3
DescriptionLipase (Class 3)
Cds size702
COG categoryI
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186093.9647756-CDS-P-wetherbeei_contig16679:289..9911683186093.9647756-CDS-P-wetherbeei_contig16679:289..991Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16679 290..991 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16679.1.1prot_P-wetherbeei_contig16679.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig16679 290..991 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig16679.1.1

>prot_P-wetherbeei_contig16679.1.1 ID=prot_P-wetherbeei_contig16679.1.1|Name=mRNA_P-wetherbeei_contig16679.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=234bp
PLQFCEFLAYKTALAYESEDRIRTYLTKYCQGISRIVFFDSGGGRTLADA
QGYGFVFEQKAFVIFRGTESDNDWVINRTDALTDTLQNPNDNRRKKLVAR
YGDLLAKTGDPSPGRHAGFAIAWASIKDDVERWLKDVLDTGDAMSIIYSG
HSLGGAMALLGAFDHAREHKPHWISGVVTFGAPLVGGAAFVEAYKRELGD
RTVLLESSGDIVPAIMRRWYYRKLYFLRQWVQAG
back to top

mRNA from alignment at P-wetherbeei_contig16679:290..991-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig16679.1.1 ID=mRNA_P-wetherbeei_contig16679.1.1|Name=mRNA_P-wetherbeei_contig16679.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=702bp|location=Sequence derived from alignment at P-wetherbeei_contig16679:290..991- (Phaeothamnion wetherbeei SAG_119_79)
CCGCTGCAGTTCTGCGAGTTCCTCGCCTACAAGACGGCGCTCGCGTACGA ATCCGAAGACCGCATCCGCACCTATCTGACCAAGTACTGCCAGGGCATCT CGCGGATCGTGTTTTTCGACTCGGGCGGCGGTCGCACGCTGGCCGATGCC CAGGGCTACGGCTTCGTGTTCGAGCAGAAGGCGTTCGTCATCTTCCGCGG CACCGAGAGCGACAACGACTGGGTCATCAACCGTACCGATGCGCTCACCG ATACGCTGCAAAACCCCAACGACAACAGGCGCAAAAAGCTGGTGGCGCGA TATGGCGATCTGCTGGCCAAGACCGGCGATCCCTCCCCCGGCCGCCATGC CGGCTTCGCGATCGCCTGGGCCTCGATCAAGGACGATGTCGAGCGCTGGC TGAAGGACGTGCTGGATACCGGCGATGCGATGTCGATCATCTATTCGGGA CATTCGCTCGGCGGGGCGATGGCGCTGCTGGGCGCCTTCGATCACGCCCG CGAGCACAAGCCGCACTGGATATCGGGCGTCGTAACGTTCGGCGCGCCGC TGGTCGGGGGTGCAGCCTTCGTGGAGGCCTACAAGAGGGAACTGGGCGAC CGCACGGTTCTGCTCGAATCGAGCGGCGATATCGTGCCCGCCATCATGCG GCGCTGGTACTACCGCAAGCTCTACTTTCTGAGGCAGTGGGTGCAGGCGG GC
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig16679:290..991-

>mRNA_P-wetherbeei_contig16679.1.1 ID=mRNA_P-wetherbeei_contig16679.1.1|Name=mRNA_P-wetherbeei_contig16679.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=702bp|location=Sequence derived from alignment at P-wetherbeei_contig16679:290..991- (Phaeothamnion wetherbeei SAG_119_79)
CCGCTGCAGTTCTGCGAGTTCCTCGCCTACAAGACGGCGCTCGCGTACGA
ATCCGAAGACCGCATCCGCACCTATCTGACCAAGTACTGCCAGGGCATCT
CGCGGATCGTGTTTTTCGACTCGGGCGGCGGTCGCACGCTGGCCGATGCC
CAGGGCTACGGCTTCGTGTTCGAGCAGAAGGCGTTCGTCATCTTCCGCGG
CACCGAGAGCGACAACGACTGGGTCATCAACCGTACCGATGCGCTCACCG
ATACGCTGCAAAACCCCAACGACAACAGGCGCAAAAAGCTGGTGGCGCGA
TATGGCGATCTGCTGGCCAAGACCGGCGATCCCTCCCCCGGCCGCCATGC
CGGCTTCGCGATCGCCTGGGCCTCGATCAAGGACGATGTCGAGCGCTGGC
TGAAGGACGTGCTGGATACCGGCGATGCGATGTCGATCATCTATTCGGGA
CATTCGCTCGGCGGGGCGATGGCGCTGCTGGGCGCCTTCGATCACGCCCG
CGAGCACAAGCCGCACTGGATATCGGGCGTCGTAACGTTCGGCGCGCCGC
TGGTCGGGGGTGCAGCCTTCGTGGAGGCCTACAAGAGGGAACTGGGCGAC
CGCACGGTTCTGCTCGAATCGAGCGGCGATATCGTGCCCGCCATCATGCG
GCGCTGGTACTACCGCAAGCTCTACTTTCTGAGGCAGTGGGTGCAGGCGG
GC
back to top