mRNA_P-wetherbeei_contig1665.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1665.1.1 vs. uniprot
Match: A0A7S4QG60_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4QG60_9DINO) HSP 1 Score: 196 bits (497), Expect = 1.590e-50 Identity = 115/296 (38.85%), Postives = 154/296 (52.03%), Query Frame = 2
Query: 1316 CAICLEDHVA-ADLLA--GLCGGGQCLGRFCKPCLAGYCESVVQRSRYSLPPIKCPSCAGRIATASWRALVPPPIFDEYRANAHALLTIRCSGCHMPQKLFDATPPLRDPVARAAAIASLRGDFGPAATRDLLLAWRKFERGARAADDVIDAVVTGLWVCRPLEQPQPDLAGAPTTLEAEDERWEKWG------GIVVGAVLPLVRDLERRAVLQLAWLRRYPFLRTYPCECGQMTCFKCKVEGCHPGVTCAEVQARELEGSGVQFCPGCNVATVKSEACNHMVCVCGEDWTWVEE 2176
C+IC E+ + A+L GLC C G FC+PCL+ Y V+ S+Y++P I+CPSC G + T SW A V P + D + NA LL +RC C +P L A P D R+ +A + DL W ++ G E+ LA TL +DE E G + +L L+ D +RAVLQLA+LRR+P R+ C+ CFKCKV H GV+C EVQ R+++ +QFCPGC VATVKSE CN M+C+CGE+WTW E
Sbjct: 216 CSICREEPTSGAELFLPDGLCRRRSCSGAFCRPCLSRYYTKAVEASQYAVPFIRCPSCRGFVRTNSWAACVEPDVVDAMKENAKHLLNLRCIECDVPGTLLVA--PEEDEDCRSRLLAEAFEGMKASDCEDLCRWWVRYSAGE--------------------EEASVGLALLARTLSQDDEMQEADGVPPLALQSCIQCLLGLIEDTAKRAVLQLAFLRRWPKTRSACCQAAH--CFKCKVGSHHEGVSCDEVQRRQMQDDALQFCPGCGVATVKSEGCNSMICICGEEWTWEGE 487
BLAST of mRNA_P-wetherbeei_contig1665.1.1 vs. uniprot
Match: A0A812X862_9DINO (TCTN1 protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812X862_9DINO) HSP 1 Score: 184 bits (466), Expect = 1.280e-46 Identity = 111/291 (38.14%), Postives = 158/291 (54.30%), Query Frame = 2
Query: 1304 ETARCAICLEDHVAADLLAGLCGGGQCLGRFCKPCLAGYCESVVQRSRYSLPPIKCPSCAGRIATASWRALVPPPIFDEYRANAHALLTIRCSGCHMPQKL-FDATPP-LRDPVARAAAIASLRGDFGPAATRDLLLAWRKFERGARAADDVIDAVVTGLWVCRPLEQPQPDLAGAPTTLEAEDERWEKWGGIVVGAVLPLVRDLERRAVLQLAWLRRYPFLRTYPCECGQMTCFKCKVEGCHPGVTCAEVQARELE-GSGVQFCPGCNVATVKSEACNHMVCVCGEDWTW 2167
++ C IC E+ A LC C G FC CLA Y E+++Q + +++P ++CP C G + + WR V +++ NA LL++RC C P L F TP R+ +AR A S D P +L +W ++ERG +A ++D ++T W P Q D +A D+ W+++ A L+ D RAVLQL+ LRR+P +T C + CFKCKV H G +C E+Q ++ E GVQFCP C VAT+KSE CNHM+C+CGEDWTW
Sbjct: 200 QSTTCMICFENTECVRSAAQLCVDRGCEGWFCTCCLAQYFENIIQETPFAVPTLRCPGCKGFVPPSCWRKYVKAETLLKWQGNAENLLSLRCGACDEPGSLLFPGTPSDSRECLARE-AFGSQAQD--PTEAAELEQSWCQYERGEMSAGSLLDVLLT-TW--HPGYHDQIDQNDG----KAPDKFWDRFQ-----AAANLIEDAGLRAVLQLSVLRRFP--KTATLCCNEPHCFKCKVTTHHEGTSCEEMQEQQSEMEDGVQFCPSCGVATMKSEGCNHMICLCGEDWTW 473
BLAST of mRNA_P-wetherbeei_contig1665.1.1 vs. uniprot
Match: A0A812SLR6_9DINO (TCTN1 protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812SLR6_9DINO) HSP 1 Score: 176 bits (447), Expect = 3.480e-44 Identity = 102/287 (35.54%), Postives = 154/287 (53.66%), Query Frame = 2
Query: 1316 CAICLEDHVAADLLAGLCGGGQCLGRFCKPCLAGYCESVVQRSRYSLPPIKCPSCAGRIATASWRALVPPPIFDEYRANAHALLTIRCSGCHMPQKLFDATPPLRDPVARAAAIASLRGDFGPAATRDLLLAWRKFERGARAADDVIDAVVTGLWVCRPLEQPQPDLAGAPTTLEAEDERWEKWGGIVVGAVLPLVRDLERRAVLQLAWLRRYPFLRTYPCECGQMTCFKCKVEGCHPGVTCAEVQAR---ELEGSGVQFCPGCNVATVKSEACNHMVCVCGEDWTW 2167
C+ICLED LC C G FC+ CL Y E++++ + +++P ++CPSC G + + W+A V ++++NA LL++RC C P L P + +R + + G P A +L W +FERG ++A + + V+ G+W + D A +A D+ W + A L+ D RAVLQLA L+ +P T C + CF+C++ H ++C EVQ + +LE GVQFCP C VAT+K+E CNHM+C+CGEDWTW
Sbjct: 190 CSICLEDAACVRSADELCVDRGCQGWFCRHCLGLYFETIIRETPFAVPTLRCPSCKGFVPPSCWQARVKEETVAKWQSNAENLLSLRCGSCDEPGSLLFPGPESSE--SRECLVRTAFGTQEPEAAAELEQKWHEFERGQQSAATLFE-VLLGMWH----PEYSHDTADGG---KAPDDFW-----VHFSAAAKLIEDAGLRAVLQLAVLKVFPKTETRCCH--EPHCFRCRIATHHEDMSCEEVQQQMSDDLE-DGVQFCPSCGVATMKTEGCNHMICLCGEDWTW 458
BLAST of mRNA_P-wetherbeei_contig1665.1.1 vs. uniprot
Match: A0A1Q9DPR5_SYMMI (Tectonic-1 n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9DPR5_SYMMI) HSP 1 Score: 179 bits (454), Expect = 8.930e-43 Identity = 105/291 (36.08%), Postives = 155/291 (53.26%), Query Frame = 2
Query: 1301 VETARCAICLEDHVAADLLAGLCGGGQCLGRFCKPCLAGYCESVVQRSRYSLPPIKCPSCAGRIATASWRALVPPP-IFDEYRANAHALLTIRCSGCHMPQKLFDATPPLRDPVARAAAIASLRGDFGPAATRDLLLAWRKFERGARAADDVIDAVVTGLWVCRPLEQPQPDLAGAPTTLEAEDERWEKWGGIVVGAVLPLVRDLERRAVLQLAWLRRYPFLRTYPCECGQMTCFKCKVEGCHPGVTCAEVQARELE-GSGVQFCPGCNVATVKSEACNHMVCVCGEDWTW 2167
V++ C IC E+ LC C G FC CLA Y E+++Q + +++P ++CP C G + + W+ V +++ NA LL++RC C P L P ++ +R G P A +L +W ++ERG +A ++D V+ +W P + Q D G A + W+++ A L+ D RAVLQL+ L+R+P +T C + CFKCKV H G++C EV A++ E GVQFCP C VAT+KSE CNHM+C+CGEDWTW
Sbjct: 710 VQSTSCMICFENTECVRSAGQLCVDRGCEGWFCSCCLAQYFENIIQETPFAVPTLRCPGCKGFVPPSCWQEHVAKAETVEKWHQNAANLLSLRCGACDEPGSLL--LPGVKADDSREGVAREAFGTQDPTAAAELEQSWCQYERGEMSAASLLD-VLLSVW--HPGYEDQADGNGF-----APGKFWDRFS-----AAANLIEDAGLRAVLQLSVLKRFP--KTATLCCNEPHCFKCKVTTHHEGMSCEEVLAQQSEVEDGVQFCPSCGVATMKSEGCNHMICLCGEDWTW 983
BLAST of mRNA_P-wetherbeei_contig1665.1.1 vs. uniprot
Match: A0A812KER8_9DINO (TCTN1 protein n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812KER8_9DINO) HSP 1 Score: 171 bits (432), Expect = 8.980e-40 Identity = 100/286 (34.97%), Postives = 152/286 (53.15%), Query Frame = 2
Query: 1301 VETARCAICLEDHVAADLLAGLCGGGQCLGRFCKPCLAGYCESVVQRSRYSLPPIKCPSCAGRIATASWRALVPPPIFDEYRANAHALLTIRCSGCHMPQKLFDATPPLRDPVARAAAIASLRGDFGPAATRDLLLAWRKFERGARAADDVIDAVVTGLWVCRPLEQPQPDLAGAPTTLEAEDERWEKWGGIVVGAVLPLVRDLERRAVLQLAWLRRYPFLRTYPCECGQMTCFKCKVEGCHPGVTCAEVQARELE-GSGVQFCPGCNVATVKSEACNHMVCVCGE 2155
V + C IC E+ A LC C G FC CLA Y E+++Q + +++P ++CP C G + + W+ V ++++ NA LL++RC GC P L P ++ +R G P A +L +W +ERG +A ++D +++ W P + + D G A + W+++ A L+ D RAVLQL+ L+R+P +T C + CFKCKV H G++C EVQ ++ + GVQFCP C VAT+KSE CNHM+C+CGE
Sbjct: 683 VHSTSCMICFENTECVRSAAQLCVDRGCEGWFCTCCLAQYFENIIQETPFAVPTLRCPGCKGFVPPSCWQEHVTAETVEKWQGNAANLLSLRCGGCDEPGSLL--LPGVKAGDSREGVAREAFGAQDPTAAAELEQSWCLYERGEMSAASLLDVLLSA-W--HPGYEDEADRNGF-----APSKFWDRFQ-----AAANLIEDAGLRAVLQLSVLKRFP--KTATLCCNEPHCFKCKVTTHHEGMSCEEVQEQQSDMEDGVQFCPSCGVATMKSEGCNHMICLCGE 951
BLAST of mRNA_P-wetherbeei_contig1665.1.1 vs. uniprot
Match: A0A7S0ZSN9_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S0ZSN9_NOCSC) HSP 1 Score: 166 bits (420), Expect = 1.290e-38 Identity = 105/286 (36.71%), Postives = 147/286 (51.40%), Query Frame = 2
Query: 1316 CAICLEDHVAADLLAGLCGGGQCLGRFCKPCLAGYCESVVQRSRYSLPPIKCPSCAGRIATASWRALVPPPIFDEYRANAHALLTIRCSGCHMPQKLFDATPPLRDPVARAAAIASLRGDFGPAATRDLLLAWRKFERGARAADDVIDAVVTGLWVCRPLEQPQPDLAGAPTTLEAEDERWEKWGGIVVGAVLPLVRDLERRAVLQLAWLRRYPFLRTYPCECGQMTCFKCKVEGCHPGVTCAEVQARELEGSGVQFCPGCNVATVKSEACNHMVCVCGEDWTWVE 2173
C+IC E+ V +A LCG C RFC C + + Q + Y++P +KCP C GR+ TA WR V + +Y +N ALL RC C L+ A + +R A +L + A D L W F G R+A++++D++ V ++ + +AGA L G V+ + L+ D ERR QLA+ RRYP + T PC C CFKCK+ H G +C + Q E++ VQFCP C V TVKSE C+H+VCVCG +W W E
Sbjct: 199 CSICFEEGVD---VAHLCGRATCRKRFCTECSGRHAATRFQDALYTMPLLKCPGCMGRVPTAFWRKWVKDEVVAKYVSNGSALLNFRCPDCDGTGSLYCADA---EETSRNEARCAL-AELADTAALDTL--WPGFWTGERSAEELVDSI---FGVLDQTQEVEDAVAGAAPELL----------GQVMEHLPTLITDPERRGCFQLAFFRRYPKILT-PC-CSVSFCFKCKIGDWHDGESCEDRQRAEMD-INVQFCPECGVPTVKSEGCDHIVCVCGANWYWRE 459
BLAST of mRNA_P-wetherbeei_contig1665.1.1 vs. uniprot
Match: A0A813LKB7_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813LKB7_POLGL) HSP 1 Score: 147 bits (372), Expect = 1.600e-32 Identity = 107/337 (31.75%), Postives = 142/337 (42.14%), Query Frame = 2
Query: 1310 ARCAICLEDHVAADLLAGLCGGGQCLGRFCKPCLAGYCESVVQRSRYSLPPIKCPSCAGRIATASWRALVPPPIFDEYRANAHALLTIRCSGCHMPQKLF-----------------DATPPLRDPVARAAAIAS-------------------------LRGDFG------PAATRDLLLAWRKFERGARAADDVIDAVVTGLWVCRPLEQPQPDLAGAPTTLEAEDERWEKWGGIVVGAVLPL-VRDLERRAVLQLAWLRRYPFLRTYPCECGQMTCFKCKVEGCHPGVTCAEVQARELEGSGVQFCPGCNVATVKSEACNHMVCVCGEDWTWVE 2173
A C +C E H A + C G+ C C+ Y + V + Y++P I+CP C GR++TA+W V P I +Y NA ALL +RC C F + L +RAAA+ S D AA L+ AWR+F +AD+ + A + W P G P + R PL + D ERR +QLAWLRRYP +RT C CFKCKV G H ++C E Q +E G QFCP C V T+ S+ CNH+ CVCG +WTW +
Sbjct: 30 AECQVCFE-HSALPRICAACPDGR---GCCSKCIRTYFTTAVNDALYAMPMIRCPLCRGRVSTAAWAPFVGPEIQAKYLGNAFALLALRCPDCDETASFFVQPTGGSSPESHTSCSFSSNSVLARARSRAAALRSQLEREELWCDLLTARESTARRQRRTAEQDHNILEARTRAAASTLVEAWRRFRSSEASADEFV-AKLHCAW--------PPGSCGLPRSGLCRAARRRA----------PLCIEDPERRLAMQLAWLRRYPKVRTTCCRAS--VCFKCKVRGWHRNLSCEERQRQET-GRDAQFCPNCQVPTIWSDGCNHIRCVCGTEWTWED 340
BLAST of mRNA_P-wetherbeei_contig1665.1.1 vs. uniprot
Match: A0A813GAU2_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813GAU2_POLGL) HSP 1 Score: 147 bits (372), Expect = 1.940e-32 Identity = 107/337 (31.75%), Postives = 142/337 (42.14%), Query Frame = 2
Query: 1310 ARCAICLEDHVAADLLAGLCGGGQCLGRFCKPCLAGYCESVVQRSRYSLPPIKCPSCAGRIATASWRALVPPPIFDEYRANAHALLTIRCSGCHMPQKLF-----------------DATPPLRDPVARAAAIAS-------------------------LRGDFG------PAATRDLLLAWRKFERGARAADDVIDAVVTGLWVCRPLEQPQPDLAGAPTTLEAEDERWEKWGGIVVGAVLPL-VRDLERRAVLQLAWLRRYPFLRTYPCECGQMTCFKCKVEGCHPGVTCAEVQARELEGSGVQFCPGCNVATVKSEACNHMVCVCGEDWTWVE 2173
A C +C E H A + C G+ C C+ Y + V + Y++P I+CP C GR++TA+W V P I +Y NA ALL +RC C F + L +RAAA+ S D AA L+ AWR+F +AD+ + A + W P G P + R PL + D ERR +QLAWLRRYP +RT C CFKCKV G H ++C E Q +E G QFCP C V T+ S+ CNH+ CVCG +WTW +
Sbjct: 733 AECQVCFE-HSALPRICAACPDGR---GCCSKCIRTYFTTAVNDALYAMPMIRCPLCRGRVSTAAWAPFVGPEIQAKYLGNAFALLALRCPDCDETASFFVQPTGGSSPESHTSCSFSSNSVLARARSRAAALRSQLEREELWCDLLTARESTARRQRRTAEQDHNILEARTRAAASTLVEAWRRFRSSEASADEFV-AKLHCAW--------PPGSCGLPRSGLCRAARRRA----------PLCIEDPERRLAMQLAWLRRYPKVRTTCCRAS--VCFKCKVRGWHRNLSCEERQRQET-GRDAQFCPNCQVPTIWSDGCNHIRCVCGTEWTWED 1043
BLAST of mRNA_P-wetherbeei_contig1665.1.1 vs. uniprot
Match: A0A7S2IY00_9DINO (Hypothetical protein (Fragment) n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2IY00_9DINO) HSP 1 Score: 129 bits (324), Expect = 1.610e-27 Identity = 102/305 (33.44%), Postives = 142/305 (46.56%), Query Frame = 2
Query: 1316 CAICLEDHVAADLLAGLCGGGQCLGRFCKPCLAGYCESVVQRSRYS----LPPIKCPSCAGRIATASWRALVPPPIFDEYRANAHALLTIRCSGCHMPQKLFDATPPLRDPVARAAAIASLRGDFGPAATRDLLLAWRKFER--GARAADDVIDAVVTGLWVCRPLEQPQPDLAGAPTTLEA-EDERWEKWGGIVVGAVLPLVRDLERRAVLQLAWLRRYPFLRTYPCECGQMTCFKCKVEGCHPGVTCAEVQARELEGSGVQFCPGCNVATVKSEACNHMVCVCGEDWTWVEE*EKRKLQGSRG 2209
C++C E A CG +C R C+PC + + + RS +S +P I+CPSC G +AT + + P + A + L+I C G LF PP A A A L D G A + W + G+ D++++ +V+ E+ Q L+ AP E K G +L VRD+ERRA LQL + RR+P +RT PC CG F CK H +C +++EL G QFCP C V T ++ C HM CVCG W W E E+R L+ RG
Sbjct: 10 CSVCCEQEEALHS----CGSMRCRWRACRPC---WSKCLDDRSGFSYGLRVPRIRCPSCRGPLATEMLQEIA-PDLMQRQLECARSALSITCCG---EVSLFQEEPP----AAPGAVEALLPADMGAQARETIREGWLDWHDSYGSEDPDELLNLLVSAFDELE-FERGQSRLSTAPQRSEGLPPPGLSKL--FASGGLLSAVRDIERRATLQLRFRRRFPLIRT-PC-CGAEYIFVCKAHEWHDRASCRAGRSKELCSRG-QFCPECGVPTERNGGCTHMTCVCGAHWYW-ESWEERLLKDPRG 292
BLAST of mRNA_P-wetherbeei_contig1665.1.1 vs. uniprot
Match: A0A8J1Z393_9DINO (Hypothetical protein n=1 Tax=Amoebophrya sp. A25 TaxID=1410381 RepID=A0A8J1Z393_9DINO) HSP 1 Score: 115 bits (288), Expect = 2.690e-23 Identity = 92/339 (27.14%), Postives = 133/339 (39.23%), Query Frame = 2
Query: 1376 GQCLGRFCKPCLAGYCESVVQRSRYSLPPIKCPSCAGRIATAS---WRALVPPPIFDEYRANAHALLTIRCSGCHMPQKLFDAT------------------PPLRDPVARAAAIASLRGDFGPAATR-------------------------------------------DLLLAWRKFERGARAADDVIDAVVTGLW--VCRPLEQPQPDLAGAPTTLEAEDERWEKWGGIVVGAVLPL------VRDLERRAVLQLAWLRRYPFLRTYPCECGQMTCFKCKVEGCHPGVTCAEVQARELEGSGVQFCPGCNVATVKSEACNHMVCVCGEDWTWVEE 2176
G C G FC+ CLA + + + Y LP IKCP+C GR+ AS W + + NA L+ +RC C + L++ P + + +A G A+TR DL+ W F G D +D + + V + E+ Q L + ++ + V L ++ ER+AV QLA R+YP + Y CG CFKCKV H G+TC E+Q REL+ + QFCP C + T+K++ CN M+CVCG W W E
Sbjct: 177 GHCDGAFCENCLADFIRERFETATYMLPLIKCPACFGRVRGASLELWYKEAQQRLVE----NAETLMMMRCIECDESRTLYEGNDLVESSDDYLLDMLDWCLPEIEEEEDAGENMAQDEEVLGDASTRSRRATDNVPPDEGNTNQEEEQPLPKLVVTKQESAVQIREKLKQDLISTWIAFSNGLITPSDFLDEIENAILAAVHKGGERGQEALGR---------DLMQRMDALTVPRYLTSLQLVERIKCFERKAVTQLAIFRKYP--KIYTLCCGADHCFKCKVGHWHQGMTCDEMQQRELD-TEAQFCPECGIPTIKTDGCNEMICVCGAYWHWEGE 499 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1665.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1665.1.1 >prot_P-wetherbeei_contig1665.1.1 ID=prot_P-wetherbeei_contig1665.1.1|Name=mRNA_P-wetherbeei_contig1665.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=588bp MELPEAVVVAARSGDNQGVSLYLQSGGAVDAVAVSSGRSLLHMAAFNVSLback to top mRNA from alignment at P-wetherbeei_contig1665:2..2886- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1665.1.1 ID=mRNA_P-wetherbeei_contig1665.1.1|Name=mRNA_P-wetherbeei_contig1665.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2885bp|location=Sequence derived from alignment at P-wetherbeei_contig1665:2..2886- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1665:2..2886- >mRNA_P-wetherbeei_contig1665.1.1 ID=mRNA_P-wetherbeei_contig1665.1.1|Name=mRNA_P-wetherbeei_contig1665.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1764bp|location=Sequence derived from alignment at P-wetherbeei_contig1665:2..2886- (Phaeothamnion wetherbeei SAG_119_79)back to top |