mRNA_P-wetherbeei_contig16621.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig16621.1.1 vs. uniprot
Match: D7FMH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMH1_ECTSI) HSP 1 Score: 129 bits (325), Expect = 8.470e-33 Identity = 74/141 (52.48%), Postives = 99/141 (70.21%), Query Frame = 1
Query: 10 RIRELTDFRKEALLRLPQVEREVEAMTVADSEAGWAENHEREWDMLHTCLQMAGEETRLQRCHQRRQTEQAAELRAEVDDLEGDLDESAVRQAELREKLRRLEVQRCTDAAGRDRSRAVRVERVRWAIKTTRRNVIRRRRQ 432
RI++LT+FRKEA LRLP VER +E +TV D AGW EN+EREWDML C+ MA EE ++ R + + L+ E+DD E D+D S+ R+A E LRR+E+ R + A RDRSRAVR E++RWA++ RRNVI+R R+
Sbjct: 107 RIKDLTEFRKEARLRLPLVERHIENLTVQDMAAGWGENYEREWDMLTNCMGMAFEEEKIMRVKIAKLEQDLQVLKLEIDDQEADMDASSCREASRMEALRRMEITRGLNQAARDRSRAVRREKMRWAVRDVRRNVIKRSRK 247
BLAST of mRNA_P-wetherbeei_contig16621.1.1 vs. uniprot
Match: A0A1V9YAY5_9STRA (Carbon catabolite repressor protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YAY5_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 1.120e-11 Identity = 57/149 (38.26%), Postives = 84/149 (56.38%), Query Frame = 1
Query: 1 SLQRIRELTDFRKEALLRLPQVEREVEAMTVADSEAGWAENHEREWDMLHTCLQMAGEETRLQRCHQRRQTEQAAELRAEVDDLEGDLDESAVRQAELREKLRRLEVQRCTDAAGRDRSRAVRVERVRWAIKTTRRNVIRRRRQATGAA 447
+LQ I +L R + LR+P VE+E+ MT D+ GWAE E E +LH ++ EE +R R + A L E++DLE D +E V + E +RRLE+ R +RAVR++RVRW +++ RR+V+ RR+ A AA
Sbjct: 1328 ALQHIHDLKQMRLDWELRVPFVEKELAEMTPEDAARGWAEAFETEKVVLHFSRLLSAEEILSKREQIREYDAEIATLHMELEDLERDHEEFRVAETLQLETVRRLELARSGMHFAAATARAVRLQRVRWQVRSVRRHVLLRRQNAALAA 1476
BLAST of mRNA_P-wetherbeei_contig16621.1.1 vs. uniprot
Match: A0A6G0WCH9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WCH9_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 3.240e-10 Identity = 50/145 (34.48%), Postives = 84/145 (57.93%), Query Frame = 1
Query: 1 SLQRIRELTDFRKEALLRLPQVEREVEAMTVADSEAGWAENHEREWDMLHTCLQMAGEETRLQRCHQRRQTEQAAELRAEVDDLEGDLDESAVRQAELREKLRRLEVQRCTD---AAGRDRSRAVRVERVRWAIKTTRRNVIRRR 426
+LQ+I ++ R + LR+P++++E+ AMT D E GW E E E ++H ++ EE ++ R + A L+ E +DLE DL+E + + L E +RRLE+QR AA R+ A+R +++RW + + R +I+RR
Sbjct: 764 ALQQIHDIKQMRLDWELRVPELDKELAAMTRQDIERGWQEAFETEKIVIHFSRLLSAEEILSKKQQIREYDGEMATLKVECEDLERDLEEKVLDETMLLEDIRRLEMQRAAQQYVAASRE---AIRRQKLRWKVHSNRAKIIQRR 905
BLAST of mRNA_P-wetherbeei_contig16621.1.1 vs. uniprot
Match: A0A2D4CEV1_PYTIN (Lactamase_B domain-containing protein n=4 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CEV1_PYTIN) HSP 1 Score: 65.1 bits (157), Expect = 2.100e-9 Identity = 47/140 (33.57%), Postives = 77/140 (55.00%), Query Frame = 1
Query: 13 IRELTDFRKEALLRLPQVEREVEAMTVADSEAGWAENHEREWDMLHTCLQMAGEETRLQRCHQRRQTEQAAELRAEVDDLEGDLDESAVRQAELREKLRRLEVQRCTDAAGRDRSRAVRVERVRWAIKTTRRNVIRRRRQ 432
++EL + R E R P VE+E+ +T D + GW E E E +LH L+++ E+ ++ R + +LR E++DLE DL+E + + + R E+Q R R +R ++V WA++ RRNVIRR+R+
Sbjct: 1105 VKELKEMRIEWERRQPVVEKELAQLTSEDIDRGWGEAFETEKHVLHYSLELSVEDILSRKSQIREYDAEIDDLRLEIEDLERDLEECILGETMELQDYRESEMQHAHRMFAAARVREIRRQKVHWAVRNIRRNVIRRQRE 1244
BLAST of mRNA_P-wetherbeei_contig16621.1.1 vs. uniprot
Match: A0A6H5KAU5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAU5_9PHAE) HSP 1 Score: 62.4 bits (150), Expect = 8.730e-9 Identity = 42/97 (43.30%), Postives = 61/97 (62.89%), Query Frame = 1
Query: 142 MLHTCLQMAGEETRLQRCHQRRQTEQAAELRAEVDDLEGDLDESAVRQAELREKLRRLEVQRCTDAAGRDRSRAVRVERVRWAIKTTRRNVIRRRRQ 432
ML C+ MA EE ++ R + + L+ LE D+D S+ R+A E LRR+E+ R + A RDRSRAVR+E++RWA++ RRNVI+R R+
Sbjct: 1 MLTNCMGMAFEEDKIMRVKIAKFEQDLQVLK-----LEADMDASSCREASRMEALRRMEITRGLNQAARDRSRAVRLEKMRWAVRDVRRNVIKRSRK 92
BLAST of mRNA_P-wetherbeei_contig16621.1.1 vs. uniprot
Match: A0A5D6XJP8_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XJP8_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 9.700e-9 Identity = 49/144 (34.03%), Postives = 76/144 (52.78%), Query Frame = 1
Query: 1 SLQRIRELTDFRKEALLRLPQVEREVEAMTVADSEAGWAENHEREWDMLHTCLQMAGEETRLQRCHQRRQTEQAAELRAEVDDLEGDLDESAVRQAELREKLRRLEVQRCTDAAGRDRSRAVRVERVRWAIKTTRRNVIRRRRQ 432
SL+RI+EL R R P V +E+E +T D + GW E E E +L L+++ E+ +R R + +LR E DL+E + + E R +EV R + R VRV+R+RW +K+ R+NV+RR+R+
Sbjct: 835 SLRRIKELKAMRLAWERRQPFVAKELEGLTEEDVDRGWGEAFETETHILRFSLELSVEDILSRRAQVREYDVEVDDLRIXXXXXERDLEECMLGETMELEAYRDVEVGRARSMVAAAKERNVRVQRIRWRVKSDRKNVVRRQRE 978 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16621.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig16621.1.1 >prot_P-wetherbeei_contig16621.1.1 ID=prot_P-wetherbeei_contig16621.1.1|Name=mRNA_P-wetherbeei_contig16621.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=149bp SLQRIRELTDFRKEALLRLPQVEREVEAMTVADSEAGWAENHEREWDMLHback to top mRNA from alignment at P-wetherbeei_contig16621:418..1198+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig16621.1.1 ID=mRNA_P-wetherbeei_contig16621.1.1|Name=mRNA_P-wetherbeei_contig16621.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=781bp|location=Sequence derived from alignment at P-wetherbeei_contig16621:418..1198+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig16621:418..1198+ >mRNA_P-wetherbeei_contig16621.1.1 ID=mRNA_P-wetherbeei_contig16621.1.1|Name=mRNA_P-wetherbeei_contig16621.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=447bp|location=Sequence derived from alignment at P-wetherbeei_contig16621:418..1198+ (Phaeothamnion wetherbeei SAG_119_79)back to top |