mRNA_P-wetherbeei_contig1658.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1658.3.1 vs. uniprot
Match: D7FRT3_ECTSI (Mitochondrial inner membrane protease ATP23 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRT3_ECTSI) HSP 1 Score: 125 bits (314), Expect = 4.680e-33 Identity = 80/190 (42.11%), Postives = 105/190 (55.26%), Query Frame = 1
Query: 1 MDCDLCEQYLAEVLQEERPRQLVDALREGSTPK-KGG--------TPPLCQGEIPVRCYDLSSNPSYNRIRGMLCADKLSGEPELVLCANKLSSKDEVRETVVHELVHYYDYCVKGLDLRECEQNAYSEIRANREAECHPRD-GFWFDWRWENCVRSNALRSTRIVHPGSGKAEACVAKVFREALADASP 540
MDC C+++LAEVL+ ERPR+L++A+++G + K KGG P L G + + C R L A P +VLCAN+L S+ EV E VVHELVH YDY V G++L +C+ AYSE+RA R AEC + +NC RS A+RST + PG G CV VF A D P
Sbjct: 1 MDCQTCQKHLAEVLRAERPRRLLEAIQQGLSGKAKGGGDGKEEGTEPVLEPGGLRLVCQTCPRQGPAAAARAYLEAPP----PGVVLCANRLGSRREVEEAVVHELVHAYDYLVAGVELLDCQALAYSEVRAARAAECSKTSRSLVCSYFRKNCARSTAVRSTEGLFPGKGAG--CVDAVFNAAYQDQRP 184
BLAST of mRNA_P-wetherbeei_contig1658.3.1 vs. uniprot
Match: A0A7S3Y7S5_HETAK (Mitochondrial inner membrane protease ATP23 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y7S5_HETAK) HSP 1 Score: 108 bits (270), Expect = 4.210e-26 Identity = 56/112 (50.00%), Postives = 74/112 (66.07%), Query Frame = 1
Query: 226 LVLCANKLSSKDEVRETVVHELVHYYDYCVKGLDLRECEQNAYSEIRANREAECHPRDGF------WFDWRW-ENCVRSNALRSTRIVHPGSGKAEACVAKVFREALADASP 540
LVLCAN+L EV E +VHELVH YD+C+KG DL +C+Q AYSE+RA REAEC+ R+ WF + ENC+ NA+ +T+ + P +A +CVA VF EA+ D P
Sbjct: 66 LVLCANRLRGAREVEEALVHELVHAYDFCIKGRDLFDCKQLAYSEVRAAREAECYYRNVLGSYGPTWFKEKMTENCIEKNAVNATKSIFPD--QASSCVAAVFHEAIRDLEP 175
BLAST of mRNA_P-wetherbeei_contig1658.3.1 vs. uniprot
Match: A0A836CIN8_9STRA (Mitochondrial inner membrane protease ATP23 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIN8_9STRA) HSP 1 Score: 109 bits (273), Expect = 6.160e-26 Identity = 68/182 (37.36%), Postives = 95/182 (52.20%), Query Frame = 1
Query: 7 CDLCEQYLAEVLQEERPRQLVDALREG-STPKKGGTPPLCQGEIPVRCYDLSSNPSYNRIRGMLCADKLSGEPELVLCANKLSSKDEVRETVVHELVHYYDYCVKGLDLRECEQNAYSEIRANREAECH---PRDGFWFDWRWENCVRSNALRSTRIVHPGSGKAEACVAKVFREALADASP 540
CD C L VLQ +RPR+L+ A+R G K+ G C + + C D G A + LVLC N++ +E+ E +VHELVH +DYC +L C+ A+SE+RA REAECH + + W +C+R++A RST + PG+G CV VF A+AD P
Sbjct: 42 CDSCNSALQSVLQRDRPRRLMQAIRAGMQANKENGRSNDCGSDCRL-CPDQGPE-------GGARAFLETPPATLVLCVNRMRGAEEMEEALVHELVHAFDYCASNRNLFSCKSLAHSEVRAAREAECHYLYSQSPPLLEGTWRDCIRNSAARSTAQLFPGNGGR--CVDSVFTAAMADTVP 213
BLAST of mRNA_P-wetherbeei_contig1658.3.1 vs. uniprot
Match: A0A8K1C242_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C242_PYTOL) HSP 1 Score: 96.7 bits (239), Expect = 1.190e-21 Identity = 68/206 (33.01%), Postives = 98/206 (47.57%), Query Frame = 1
Query: 16 CEQYLAEVLQEERPRQLVDALRE-GST-----------------PKKGGTPPLCQGEIPVRCYDLSSNPSYNRIRGMLCADKLSGEPELVLCANKLSSKDEVRETVVHELVHYYDYCVKGLDLRECEQNAYSEIRANREAECH----------PRDGFW---FDWRWENCVRSNALRSTRIVHPGSGKAEACVAKVFREALADASP 540
CE+ + + L++ RPR++V+ + E GST T + I C D + R R A P +V CAN+L S EV ET+VHEL+H YD+ V+ +D+ + + A SEIR+ RE+EC+ P F+ W CVR +A+RSTR + P K E V K+F + AD SP
Sbjct: 6 CEEAVQDALKQPRPRRIVNIINEVGSTFVEALACHLAKEQSKQADTSSSTTSARKNSIDFVCLDCREDGPEGRARAFFSAPP----PTVVFCANRLHSAKEVEETMVHELIHAYDFTVRSMDITKSDLLACSEIRSARESECYRMARLLANAIPDVAFFQKSATWLNRQCVRDHAIRSTRSMFPDKAKDE--VDKMFNQCYADQSP 205
BLAST of mRNA_P-wetherbeei_contig1658.3.1 vs. uniprot
Match: W4GV28_9STRA (Mitochondrial inner membrane protease ATP23 n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GV28_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 6.070e-21 Identity = 62/196 (31.63%), Postives = 92/196 (46.94%), Query Frame = 1
Query: 1 MDCDLCEQYLAEVLQEERPRQLVDALREGSTPKKGGTPPLCQGEIPVR----CYDLSSNPSYNRIRGMLCADKLSGEPELVLCANKLSSKDEVRETVVHELVHYYDYCVKGLDLRECEQNAYSEIRANREAECHPRDG------------FWFDWRWENCVRSNALRSTRIVHPGSGKAEACVAKVFREALADASP 540
MD C+ L + L+E RP+QLV+A+ KK T + P C D S + R + P +VLCAN+L++ ++V+E VVHEL+H YDY V+ +DL + A SE+R+ RE+EC + DW + CV+ NA+ +T + P V VF D +P
Sbjct: 1 MDIPKCDAALQQALKEPRPKQLVEAINTFLKKKKAST--SSSNDDPTHLEFICLDCKSEGVEGKARAFFASP-----PAIVLCANRLNTTEDVKEVVVHELIHAYDYTVRNMDLTQPAVLACSEVRSARESECFEKAQALCKDPQLSMVLHGCDWWVKKCVKQNAIHATSSLFPHDASTH--VHNVFETCFKDHTP 187
BLAST of mRNA_P-wetherbeei_contig1658.3.1 vs. uniprot
Match: A0A485LMS1_9STRA (Mitochondrial inner membrane protease ATP23 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LMS1_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 1.090e-20 Identity = 65/194 (33.51%), Postives = 96/194 (49.48%), Query Frame = 1
Query: 1 MDCDLCEQYLAEVLQEERPRQLVDALRE--GSTPKKGGTPPLCQGEIPVRCYDLSSNPSYNRIRGMLCADKLSGEPELVLCANKLSSKDEVRETVVHELVHYYDYCVKGLDLRECEQNAYSEIRANREAECH---------PRDGF---WFDWRWENCVRSNALRSTRIVHPGSGKAEACVAKVFREALADASP 540
MD CE+ L + L+E R +QLV + T K P + C D S + R + P +VLCAN+L + D+V+E VVHEL+H YDY V+ +DL + + A SE+R+ RE+EC+ P+ G +W + CV+ NA+ +T + P AE V +VF AD +P
Sbjct: 1 MDIPRCEEALQQALKEPRQKQLVVTIDSFLKKTKKTADDP----SALEFVCLDCKSEGVEGKARAFFASP-----PAIVLCANRLHTTDDVKEVVVHELIHAYDYTVRKMDLTQPDVLACSEVRSARESECYEKAQALCNNPQFGLVNKGCEWWVKKCVKQNAVLATSSLFPAD--AEKHVTRVFDTCYADKAP 183
BLAST of mRNA_P-wetherbeei_contig1658.3.1 vs. uniprot
Match: A0A6G0X2A7_9STRA (Mitochondrial inner membrane protease ATP23 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X2A7_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 3.050e-20 Identity = 63/193 (32.64%), Postives = 97/193 (50.26%), Query Frame = 1
Query: 1 MDCDLCEQYLAEVLQEERPRQLVDALREG-STPKKGGTPPLCQGEIPVRCYDLSSNPSYNRIRGMLCADKLSGEPELVLCANKLSSKDEVRETVVHELVHYYDYCVKGLDLRECEQNAYSEIRANREAEC---------HPRDGFW---FDWRWENCVRSNALRSTRIVHPGSGKAEACVAKVFREALADASP 540
MD C+ L E L+E R RQL++ + KK + P E+ C D + + R + P +VLCAN+L + D+V+E VVHEL+H YDY V+ +DL A SE+R+ RE+EC +P+ +W + CV+ NA+++T + P +A+ V VF + AD +P
Sbjct: 1 MDIPACDAALHEALKEPRQRQLLEVINTFLKKSKKSSSDP---SELEFVCLDCKAEGVEGKARAFFASP-----PAIVLCANRLHTNDDVKEVVVHELIHAYDYTVRNMDLTIPRILACSEVRSARESECFNTAEAMCNNPQFSMLNRGCEWYIKRCVKKNAVKATSSLFPD--EADKLVHDVFDKCYADKAP 183
BLAST of mRNA_P-wetherbeei_contig1658.3.1 vs. uniprot
Match: A0A7S0CM54_9STRA (Mitochondrial inner membrane protease ATP23 n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CM54_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 7.110e-20 Identity = 58/155 (37.42%), Postives = 80/155 (51.61%), Query Frame = 1
Query: 88 STPKKGGTPPLCQGEIPVRCYDLSSNPSYNRIRGMLCADKLSGEPELVLCANKLSSKDEVRETVVHELVHYYDYCVK----GLDLRECEQNAYSEIRANREAECHPRDGFWFDWRWENCVRSNALRSTRIVHPGSGKAEACVAKVFREALADASP 540
+T + PP Q + ++C R + K + LCAN+L S +EV E +VHEL+H YD V+ LDLR+C+Q AYSE+RA REAEC F + CVR A +T + P G+ CVA+V+ EA+ D SP
Sbjct: 26 ATSARQSPPPPAQPPMEIQCSWCGDEGPEGSARAFV---KGPDPMSITLCANRLQSLEEVEEVLVHELIHVYDVRVRKGSDALDLRQCDQLAYSEVRAAREAECFNSSRFTKAY----CVRDRAAVATSNMFPKDGRH--CVAQVYEEAMKDLSP 171
BLAST of mRNA_P-wetherbeei_contig1658.3.1 vs. uniprot
Match: K3WBI6_GLOUD (Mitochondrial inner membrane protease ATP23 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WBI6_GLOUD) HSP 1 Score: 90.5 bits (223), Expect = 1.980e-19 Identity = 60/191 (31.41%), Postives = 96/191 (50.26%), Query Frame = 1
Query: 16 CEQYLAEVLQEERPRQLVDALREGSTPKKGGTPPLCQGE---IPVRCYDLSSNPSYNRIRGMLCADKLSGEPELVLCANKLSSKDEVRETVVHELVHYYDYCVKGLDLRECEQNAYSEIRANREAECHPR---------DGFWF----DWRWENCVRSNALRSTRIVHPGSGKAEACVAKVFREALADASP 540
CE + L++ RP+ +VD + + + T + + I C + + R R A P +V CAN+L S EV ET+VHEL+H YD+ V+ +D+ + + A SEIR+ RE+EC+ + D +F +W CVR +A+RST+ + P +A+ V K+F + D SP
Sbjct: 6 CEDAVHAALKQRRPKLIVDIINKHLVEEAKQTDAVGSAKKKSIDFVCIECKDDGPEGRARAFFSAPP----PTIVFCANRLHSAREVEETMVHELIHAYDFTVRKMDITKSDLLACSEIRSARESECYQKAHILASMLPDVEFFRKSSNWLHTRCVREHAVRSTKSMFPNQARAD--VDKMFDQCYHDKSP 190
BLAST of mRNA_P-wetherbeei_contig1658.3.1 vs. uniprot
Match: A0A5D6XLN7_9STRA (Mitochondrial inner membrane protease ATP23 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XLN7_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 3.410e-19 Identity = 64/193 (33.16%), Postives = 99/193 (51.30%), Query Frame = 1
Query: 1 MDCDLCEQYLAEVLQEERPRQLVDALREGSTPKKGGTPPLCQGEIPVRCYDLSSNPSYNRIRGMLCADKLSGEPELVLCANKLSSKDEVRETVVHELVHYYDYCVKGLDLRECEQNAYSEIRANREAECHPR---------DGFWFD----WRWENCVRSNALRSTRIVHPGSGKAEACVAKVFREALADASP 540
M+ CE+ + L++ RP+ +VD + + T Q +I C + + R R A P +V CAN+L S+ EV ET+VHEL+H YD+ V+ +DL + + A SEIR+ RE+EC + D +F+ W CVR +A+RST+ + P ++E V K+F + AD SP
Sbjct: 1 MEVPDCEEAVHVALKQRRPKLIVDIINKHLA--AASTDGSAQ-KINFVCLECRDDGPEGRARAFFSAPP----PTVVFCANRLHSEREVEETMVHELIHAYDFTVRKMDLTKSDLLACSEIRSARESECFQKATLLAALLPDVEFFNKSSRWLHMRCVREHAVRSTQSMFPVEAQSE--VDKMFTQCYADNSP 184 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1658.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1658.3.1 >prot_P-wetherbeei_contig1658.3.1 ID=prot_P-wetherbeei_contig1658.3.1|Name=mRNA_P-wetherbeei_contig1658.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=180bp MDCDLCEQYLAEVLQEERPRQLVDALREGSTPKKGGTPPLCQGEIPVRCYback to top mRNA from alignment at P-wetherbeei_contig1658:2397..3180+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1658.3.1 ID=mRNA_P-wetherbeei_contig1658.3.1|Name=mRNA_P-wetherbeei_contig1658.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=784bp|location=Sequence derived from alignment at P-wetherbeei_contig1658:2397..3180+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1658:2397..3180+ >mRNA_P-wetherbeei_contig1658.3.1 ID=mRNA_P-wetherbeei_contig1658.3.1|Name=mRNA_P-wetherbeei_contig1658.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=540bp|location=Sequence derived from alignment at P-wetherbeei_contig1658:2397..3180+ (Phaeothamnion wetherbeei SAG_119_79)back to top |