mRNA_P-wetherbeei_contig1657.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1657.3.1 vs. uniprot
Match: A0A7S3XJQ2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XJQ2_HETAK) HSP 1 Score: 81.6 bits (200), Expect = 5.860e-16 Identity = 37/76 (48.68%), Postives = 57/76 (75.00%), Query Frame = 2
Query: 2 HHSLLGRFLLEMYVPTEQVGIIVGKAGAMVQNISRETDTK-IVTPRSEGLLWSKVLIKGDPTGTFEAFERIEGMVD 226
H S+ G+F L ++VP E+ G+I+GK GAM+ +I RE++TK I+ P+ E LWS ++IKGDP+GTF A++ I +V+
Sbjct: 38 HPSIRGKFTLSIWVPAEKCGMIIGKRGAMITHIQRESNTKLIIPPQIEESLWSPIVIKGDPSGTFGAYKLISDLVE 113
BLAST of mRNA_P-wetherbeei_contig1657.3.1 vs. uniprot
Match: A0A6H5L596_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L596_9PHAE) HSP 1 Score: 66.2 bits (160), Expect = 1.800e-9 Identity = 31/79 (39.24%), Postives = 49/79 (62.03%), Query Frame = 2
Query: 2 HHSLLGRFLLEMYVPTEQVGIIVGKAGAMVQNIS-RETDTKIVTPRSEGLLWSKVLIKGDPTGTFEAFERIEGMVDGEV 235
H L GRF L +++P EQ +++GK G + Q + + D + P GLLWS V+I GDPT +F+A++ I +V+G +
Sbjct: 14 HPHLKGRFTLRIWIPVEQTAMVIGKCGQIKQELGVKSIDCPVAPP---GLLWSPVVITGDPTSSFKAYKAIAEIVEGAI 89
BLAST of mRNA_P-wetherbeei_contig1657.3.1 vs. uniprot
Match: A0A7S1UIG6_9STRA (Hypothetical protein (Fragment) n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UIG6_9STRA) HSP 1 Score: 62.4 bits (150), Expect = 1.140e-8 Identity = 28/67 (41.79%), Postives = 47/67 (70.15%), Query Frame = 2
Query: 29 LEMYVPTEQVGIIVGKAGAMVQNISRETDTKI-VTPRSEGLLWSKVLIKGDPTGTFEAFERIEGMVD 226
L ++VP EQVG+I+GK GAMV +I R++ T+I V P+S+ W+ + +KG G F A++ ++ +V+
Sbjct: 38 LSLWVPFEQVGLIIGKKGAMVNHIQRDSRTQITVPPQSKPSAWAPITVKGSGLGAFAAYQMLKALVE 104
BLAST of mRNA_P-wetherbeei_contig1657.3.1 vs. uniprot
Match: A0A7R9U8S6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U8S6_9STRA) HSP 1 Score: 60.8 bits (146), Expect = 1.090e-7 Identity = 25/67 (37.31%), Postives = 46/67 (68.66%), Query Frame = 2
Query: 29 LEMYVPTEQVGIIVGKAGAMVQNISRETDTKI-VTPRSEGLLWSKVLIKGDPTGTFEAFERIEGMVD 226
L ++VP EQVG+I+G+ G MV +I R++ T+I + P+S+ W+ + ++G G F A++ ++ +VD
Sbjct: 55 LSLWVPNEQVGMIIGRKGGMVTHIQRDSGTQITIPPQSKPSAWAPIAVRGSAAGAFAAYQMLKALVD 121
BLAST of mRNA_P-wetherbeei_contig1657.3.1 vs. uniprot
Match: A0A8J2S6H3_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S6H3_9STRA) HSP 1 Score: 56.2 bits (134), Expect = 5.190e-6 Identity = 42/132 (31.82%), Postives = 64/132 (48.48%), Query Frame = 2
Query: 23 FLLEMYVPTEQVGIIVGKAGAMVQNISRETDTKI-VTPRSEGLLWSKVLIKGDPTGTFEAFERIEGMVDGEVWACGCTCFHLPQPAEEVGCHGFSLLVAVATPVSVWKLGTSNAILRSHIGSLKHAIAPTIP 415
F L +++P EQVGI++G++G + I T +++ V P + W+ V I+G P G F A +++ +VD EV C FHL G G +LL + G SN L + S H + IP
Sbjct: 574 FKLTLWIPVEQVGIVIGRSGQTINKIQGGTSSRLNVVPDQDASAWAPVYIRGAPDGVFAAAQQVVELVD-EVDDCVAE-FHL-------GGRGRTLLRDENS-------GPSNLTLETKKVSADHKVRILIP 689
BLAST of mRNA_P-wetherbeei_contig1657.3.1 vs. uniprot
Match: F0Y7C5_AURAN (Expressed protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y7C5_AURAN) HSP 1 Score: 55.1 bits (131), Expect = 8.260e-6 Identity = 25/69 (36.23%), Postives = 42/69 (60.87%), Query Frame = 2
Query: 23 FLLEMYVPTEQVGIIVGKAGAMVQNISRETDTKI-VTPRSEGLLWSKVLIKGDPTGTFEAFERIEGMVD 226
F L +++P EQVGI++G++GA + I + +++ V P E W+ V IKG P G F A + + +V+
Sbjct: 6 FKLTIWIPVEQVGIVIGRSGATISRIQSSSSSRLNVVPDPEASPWAPVYIKGAPDGVFMAAKLVSDLVE 74
BLAST of mRNA_P-wetherbeei_contig1657.3.1 vs. uniprot
Match: A0A7S2GUZ9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GUZ9_9STRA) HSP 1 Score: 55.5 bits (132), Expect = 8.810e-6 Identity = 29/73 (39.73%), Postives = 45/73 (61.64%), Query Frame = 2
Query: 20 RFLLEMYVPTEQVGIIVGKAGAMVQNISRETDTKI-VTPRS---EGLLWSKVLIKGDPTGTFEAFERIEGMVD 226
RF + ++VP EQVG+++GK G M+ +I RET+T I + P++ E LW+ V I+G P A + +VD
Sbjct: 51 RFSITLWVPDEQVGMVIGKGGNMIGHIRRETNTTIQILPQTDDGEKSLWAPVSIRGHPNSARAAISMVVKLVD 123 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1657.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1657.3.1 >prot_P-wetherbeei_contig1657.3.1 ID=prot_P-wetherbeei_contig1657.3.1|Name=mRNA_P-wetherbeei_contig1657.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=138bp MYVPTEQVGIIVGKAGAMVQNISRETDTKIVTPRSEGLLWSKVLIKGDPTback to top mRNA from alignment at P-wetherbeei_contig1657:2856..3390+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1657.3.1 ID=mRNA_P-wetherbeei_contig1657.3.1|Name=mRNA_P-wetherbeei_contig1657.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=535bp|location=Sequence derived from alignment at P-wetherbeei_contig1657:2856..3390+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1657:2856..3390+ >mRNA_P-wetherbeei_contig1657.3.1 ID=mRNA_P-wetherbeei_contig1657.3.1|Name=mRNA_P-wetherbeei_contig1657.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=414bp|location=Sequence derived from alignment at P-wetherbeei_contig1657:2856..3390+ (Phaeothamnion wetherbeei SAG_119_79)back to top |