mRNA_P-wetherbeei_contig16545.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig16545.1.1 vs. uniprot
Match: A0A7C4TP59_9HYPH (MarR family transcriptional regulator n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4TP59_9HYPH) HSP 1 Score: 228 bits (581), Expect = 1.710e-74 Identity = 114/148 (77.03%), Postives = 133/148 (89.86%), Query Frame = 1
Query: 1 MAKEKSSDRLDRSPIHLLHRAGQCAGDIFQGEMAAAGLTPRQFAVLVTVSQNEGLSQTNLVDHTGIDRSTLADIIRRMIKKGLVQRRRTKEDARAYAVRLTDEGNRVLRASDPLARKVDDKVLSVLSNAERERFLQDLGKIVRMLGTM 444
M KEKS+DRL+RSP+HLLHRAGQCAGDIFQ EMA GLTPRQ+AVL TVS NEGLSQTNLV+ TGIDRSTLADIIRRM++KGL+ RRRTKEDARAY+V+LTDEG RVL++++PLAR+VDDK+L+ L +RERFLQDLGKIVR +G M
Sbjct: 1 MPKEKSADRLERSPVHLLHRAGQCAGDIFQAEMADGGLTPRQYAVLYTVSHNEGLSQTNLVEKTGIDRSTLADIIRRMLRKGLLARRRTKEDARAYSVKLTDEGWRVLKSAEPLARRVDDKILAALPTQDRERFLQDLGKIVRNIGPM 148
BLAST of mRNA_P-wetherbeei_contig16545.1.1 vs. uniprot
Match: A0A2S5PBX5_HYPSQ (MarR family transcriptional regulator n=2 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A2S5PBX5_HYPSQ) HSP 1 Score: 216 bits (550), Expect = 1.140e-69 Identity = 109/145 (75.17%), Postives = 129/145 (88.97%), Query Frame = 1
Query: 1 MAKEKSSDRLDRSPIHLLHRAGQCAGDIFQGEMAAAGLTPRQFAVLVTVSQNEGLSQTNLVDHTGIDRSTLADIIRRMIKKGLVQRRRTKEDARAYAVRLTDEGNRVLRASDPLARKVDDKVLSVLSNAERERFLQDLGKIVRML 435
MAKE + RL+RSPIHLLHRAGQCAGDIFQ EM A+ LTPRQFAVLVTVSQNEGLSQTNLV+ TGIDRSTLADI+RRM+KKGL+QRRRTKEDARAY+V+L+DEG R L++++P+AR+VDDKVL+VLS +R+RF+ DL IV L
Sbjct: 6 MAKEAQAPRLERSPIHLLHRAGQCAGDIFQTEMGASDLTPRQFAVLVTVSQNEGLSQTNLVEKTGIDRSTLADIVRRMLKKGLLQRRRTKEDARAYSVKLSDEGWRTLKSAEPMARRVDDKVLAVLSGPQRDRFVNDLNTIVEAL 150
BLAST of mRNA_P-wetherbeei_contig16545.1.1 vs. uniprot
Match: A0A6I3KKW2_9HYPH (MarR family transcriptional regulator n=4 Tax=Hyphomicrobium TaxID=81 RepID=A0A6I3KKW2_9HYPH) HSP 1 Score: 211 bits (536), Expect = 1.300e-67 Identity = 104/146 (71.23%), Postives = 128/146 (87.67%), Query Frame = 1
Query: 7 KEKSSDRLDRSPIHLLHRAGQCAGDIFQGEMAAAGLTPRQFAVLVTVSQNEGLSQTNLVDHTGIDRSTLADIIRRMIKKGLVQRRRTKEDARAYAVRLTDEGNRVLRASDPLARKVDDKVLSVLSNAERERFLQDLGKIVRMLGTM 444
++ + +L+RSPIHLLHRAGQCA DIFQGEM A LTPRQ+AVLV VS NEG+SQT LV+ TG+DRSTLADI+RRM+KKGL+QRRRTKEDARAY+V+LTDEG +VL+A+DPLAR+VDD++L VL A+RERFLQDL +IV+ LG +
Sbjct: 7 RDMAGGKLERSPIHLLHRAGQCASDIFQGEMVAGDLTPRQYAVLVAVSLNEGVSQTLLVEKTGVDRSTLADIVRRMLKKGLLQRRRTKEDARAYSVKLTDEGWKVLKAADPLARRVDDRILGVLPGAQRERFLQDLNQIVKALGKL 152
BLAST of mRNA_P-wetherbeei_contig16545.1.1 vs. uniprot
Match: A0A101VID2_9PROT (MarR family transcriptional regulator n=1 Tax=Alphaproteobacteria bacterium BRH_c36 TaxID=1734406 RepID=A0A101VID2_9PROT) HSP 1 Score: 208 bits (529), Expect = 1.790e-66 Identity = 104/148 (70.27%), Postives = 124/148 (83.78%), Query Frame = 1
Query: 1 MAKEKSSDRLDRSPIHLLHRAGQCAGDIFQGEMAAAGLTPRQFAVLVTVSQNEGLSQTNLVDHTGIDRSTLADIIRRMIKKGLVQRRRTKEDARAYAVRLTDEGNRVLRASDPLARKVDDKVLSVLSNAERERFLQDLGKIVRMLGTM 444
M KE +L++SPIHLLHRAGQCAGD+FQ EM LTPRQ+AVLV V++NEGLSQTNLVD TGIDRSTLADIIRRM+KKGLVQRRRTKEDARAYAV+LT++G R+L A++P+A+KVD+++L L AERERFL DL IV LG +
Sbjct: 1 MQKESKVVQLEQSPIHLLHRAGQCAGDVFQSEMRTEDLTPRQYAVLVAVAENEGLSQTNLVDMTGIDRSTLADIIRRMLKKGLVQRRRTKEDARAYAVKLTEDGRRILEAAEPMAKKVDERILQALPAAERERFLSDLSMIVEALGKL 148
BLAST of mRNA_P-wetherbeei_contig16545.1.1 vs. uniprot
Match: A0A849TQV1_9HYPH (MarR family transcriptional regulator n=1 Tax=Hyphomicrobiaceae bacterium TaxID=2015799 RepID=A0A849TQV1_9HYPH) HSP 1 Score: 205 bits (521), Expect = 2.200e-65 Identity = 100/148 (67.57%), Postives = 124/148 (83.78%), Query Frame = 1
Query: 1 MAKEKSSDRLDRSPIHLLHRAGQCAGDIFQGEMAAAGLTPRQFAVLVTVSQNEGLSQTNLVDHTGIDRSTLADIIRRMIKKGLVQRRRTKEDARAYAVRLTDEGNRVLRASDPLARKVDDKVLSVLSNAERERFLQDLGKIVRMLGTM 444
MA+E+ +DRL RSP+H+LHRAGQCAGD+F GE+ LTPRQ+AVL TV+QNEGLSQT LVD TGIDRSTLADI+RRM+KKGL+QRRRTKEDARAYAV+LT+EG R+LR ++P+AR+VD+++L L +RE+FL DL IV L M
Sbjct: 1 MAREEKADRLSRSPLHMLHRAGQCAGDLFHGEIKDGDLTPRQYAVLATVAQNEGLSQTGLVDRTGIDRSTLADIVRRMLKKGLLQRRRTKEDARAYAVKLTEEGKRMLRTAEPIARRVDERILEGLQAKQREQFLDDLSTIVTTLSKM 148
BLAST of mRNA_P-wetherbeei_contig16545.1.1 vs. uniprot
Match: A0A258L578_9HYPH (MarR family transcriptional regulator n=2 Tax=unclassified Hyphomicrobium TaxID=2619925 RepID=A0A258L578_9HYPH) HSP 1 Score: 204 bits (519), Expect = 5.380e-65 Identity = 104/143 (72.73%), Postives = 122/143 (85.31%), Query Frame = 1
Query: 10 EKSSDRLDRSPIHLLHRAGQCAGDIFQGEMAAAGLTPRQFAVLVTVSQNEGLSQTNLVDHTGIDRSTLADIIRRMIKKGLVQRRRTKEDARAYAVRLTDEGNRVLRASDPLARKVDDKVLSVLSNAERERFLQDLGKIVRMLG 438
+ SS+ LDRSPIHLLHRAGQCA DIFQ EM LTPRQ+AVL+TVSQNEGLSQT LV+ TGIDRSTLADI+RRM+KKGL+ RRRT+EDARAYAVRLTD+G + LR +DP+AR+VD+++LS L A+RERFL DLG IV LG
Sbjct: 12 QASSNELDRSPIHLLHRAGQCAADIFQVEMGLDDLTPRQYAVLLTVSQNEGLSQTQLVEKTGIDRSTLADIVRRMLKKGLLSRRRTREDARAYAVRLTDDGWKSLRTADPVARRVDERILSALPAAQRERFLTDLGTIVTALG 154
BLAST of mRNA_P-wetherbeei_contig16545.1.1 vs. uniprot
Match: A0A800BA50_9BACT (MarR family transcriptional regulator n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A800BA50_9BACT) HSP 1 Score: 202 bits (513), Expect = 3.630e-64 Identity = 99/139 (71.22%), Postives = 123/139 (88.49%), Query Frame = 1
Query: 25 RLDRSPIHLLHRAGQCAGDIFQGEMAAAGLTPRQFAVLVTVSQNEGLSQTNLVDHTGIDRSTLADIIRRMIKKGLVQRRRTKEDARAYAVRLTDEGNRVLRASDPLARKVDDKVLSVLSNAERERFLQDLGKIVRMLGT 441
RL+RSPIHLLHRAGQCA DIFQGEM+ LTPRQ+A+LV V+QNEGLSQT LV+ TG+DRSTLADI+RRM+KKGL+QRRRTK+DARAYAV+LTDEG RVL+A++P+A++VD+ +LS LS+ +RERFL+DL IV L +
Sbjct: 5 RLERSPIHLLHRAGQCASDIFQGEMSEGDLTPRQYALLVAVAQNEGLSQTQLVEKTGVDRSTLADIVRRMLKKGLLQRRRTKDDARAYAVKLTDEGWRVLKAAEPMAKRVDEAILSALSDTQRERFLEDLVAIVESLSS 143
BLAST of mRNA_P-wetherbeei_contig16545.1.1 vs. uniprot
Match: A0A6N6T3Z7_9HYPH (MarR family transcriptional regulator n=1 Tax=Hyphomicrobiaceae bacterium TaxID=2015799 RepID=A0A6N6T3Z7_9HYPH) HSP 1 Score: 201 bits (510), Expect = 9.410e-64 Identity = 101/145 (69.66%), Postives = 120/145 (82.76%), Query Frame = 1
Query: 1 MAKEKSSDRLDRSPIHLLHRAGQCAGDIFQGEMAAAGLTPRQFAVLVTVSQNEGLSQTNLVDHTGIDRSTLADIIRRMIKKGLVQRRRTKEDARAYAVRLTDEGNRVLRASDPLARKVDDKVLSVLSNAERERFLQDLGKIVRML 435
M +E S+DRL RSPIHLLHRAGQCAGDIF EM LTPRQ AVLVTV+ NEGLSQT LVD TGIDRSTLADI+RRM +KGL+QRRRT+EDARAYAV+LTDEG RVLR ++PL+R+VD+++L L + +RE+F+ DL IV L
Sbjct: 1 MKREASTDRLSRSPIHLLHRAGQCAGDIFHTEMKDGDLTPRQLAVLVTVAHNEGLSQTGLVDRTGIDRSTLADIVRRMQRKGLLQRRRTREDARAYAVKLTDEGRRVLRVAEPLSRRVDERILEALPSKQREQFIDDLQSIVEAL 145
BLAST of mRNA_P-wetherbeei_contig16545.1.1 vs. uniprot
Match: A0A2S5MAT9_HYPSQ (MarR family transcriptional regulator n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A2S5MAT9_HYPSQ) HSP 1 Score: 199 bits (507), Expect = 2.970e-63 Identity = 100/146 (68.49%), Postives = 125/146 (85.62%), Query Frame = 1
Query: 1 MAKEKSSDRLDRSPIHLLHRAGQCAGDIFQGEMAAAGLTPRQFAVLVTVSQNEGLSQTNLVDHTGIDRSTLADIIRRMIKKGLVQRRRTKEDARAYAVRLTDEGNRVLRASDPLARKVDDKVLSVLSNAERERFLQDLGKIVRMLG 438
MA+E ++ RLD+SP+HLLHRAGQ A + F+ EMA LTPRQFAVLVTVSQNEGLSQTNLV+ TGIDRSTLAD++RRM+KKGL++RRRT+ DARAY+V+LTDEG+R+L+ +DPLA +VDD++LS L A RERF+QDL IV +G
Sbjct: 1 MARETTTHRLDKSPLHLLHRAGQGATEAFEREMATDSLTPRQFAVLVTVSQNEGLSQTNLVEQTGIDRSTLADVVRRMLKKGLIKRRRTRHDARAYSVKLTDEGSRMLKIADPLADRVDDRILSSLPVARRERFMQDLRAIVHGMG 146
BLAST of mRNA_P-wetherbeei_contig16545.1.1 vs. uniprot
Match: A0A3S0RDT1_HYPSQ (MarR family transcriptional regulator n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A3S0RDT1_HYPSQ) HSP 1 Score: 199 bits (505), Expect = 5.790e-63 Identity = 96/145 (66.21%), Postives = 126/145 (86.90%), Query Frame = 1
Query: 1 MAKEKSSDRLDRSPIHLLHRAGQCAGDIFQGEMAAAGLTPRQFAVLVTVSQNEGLSQTNLVDHTGIDRSTLADIIRRMIKKGLVQRRRTKEDARAYAVRLTDEGNRVLRASDPLARKVDDKVLSVLSNAERERFLQDLGKIVRML 435
MA+E + +RL+RSP+HLLHRAGQCA +IFQ E+ + LTPRQFA+L+TV+QNEGL+QT LV+ TGIDRSTLAD++RRM+KKGL+QRRRT++DARAYAV+LT+EG RVL+ DP+AR+VD+++LS L +R+RFLQDL IV+ L
Sbjct: 1 MARETAGNRLERSPLHLLHRAGQCAAEIFQVELGSDDLTPRQFAILLTVAQNEGLNQTQLVEMTGIDRSTLADVVRRMLKKGLLQRRRTRDDARAYAVKLTEEGARVLKTHDPMARRVDERILSSLPAQQRDRFLQDLSSIVQTL 145 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16545.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig16545.1.1 >prot_P-wetherbeei_contig16545.1.1 ID=prot_P-wetherbeei_contig16545.1.1|Name=mRNA_P-wetherbeei_contig16545.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=148bp MAKEKSSDRLDRSPIHLLHRAGQCAGDIFQGEMAAAGLTPRQFAVLVTVSback to top mRNA from alignment at P-wetherbeei_contig16545:10..453- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig16545.1.1 ID=mRNA_P-wetherbeei_contig16545.1.1|Name=mRNA_P-wetherbeei_contig16545.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=444bp|location=Sequence derived from alignment at P-wetherbeei_contig16545:10..453- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig16545:10..453- >mRNA_P-wetherbeei_contig16545.1.1 ID=mRNA_P-wetherbeei_contig16545.1.1|Name=mRNA_P-wetherbeei_contig16545.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=444bp|location=Sequence derived from alignment at P-wetherbeei_contig16545:10..453- (Phaeothamnion wetherbeei SAG_119_79)back to top |