mRNA_P-wetherbeei_contig1653.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1653.3.1
Unique NamemRNA_P-wetherbeei_contig1653.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1653.3.1 vs. uniprot
Match: A0A6G0PK55_9STRA (Uncharacterized protein n=6 Tax=Phytophthora TaxID=4783 RepID=A0A6G0PK55_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 6.140e-18
Identity = 155/335 (46.27%), Postives = 194/335 (57.91%), Query Frame = 2
Query:  224 ACRLARSSGKLLLSNRNLTSFPSEALRPQENTAAGDEKWWEALPLQHCDLTHNAIIELPVDLCRLDTLVVLRASHNALTALPS--LELPALXXXXXXXXXXXXXXNGFGDGLPSLRELVANNNHLVALPESLGRASALSTLRVAQNRLTSLPDAIGAXXXXWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFPTLPLPAPELAQVLLGHNALRAVDPAALLALAPACVELHLQSNGIAVLPAEVGAMAALRVLQVAXXXXXXXXXXXXXXXXXXXXXXSGNPLKAVRRTLLEGGIEDLKKYLRTRGP 1222
            A R AR +G L L  RNLT FP++    +E+    DEK WE + L   DL+HNAI  +  ++  L ++  ++ + NAL  LP    EL AL              +     L  L+ELV + N L  LP+S+                         XXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   FP LP  A  L Q+ LG+N L A+D  ++L +  +   L ++ N +A LPA +  +  L+ L VAXXXXXXXXX              GNP++A+RR+++  G E LKKYLRTRGP
Sbjct:   28 ALREARRTGVLSLPARNLTEFPAKVYHLEEHLEK-DEKKWECVDLVKVDLSHNAIPSISDEIAGLTSVTSIKLTKNALQVLPEGFFELQALTYLDLSHNQLEQDLSESFGALVGLKELVLSGNKLSRLPDSIALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVVFPELPDGA-VLHQIFLGYNMLSAIDETSILRIKDSATVLDMRDNKLASLPANIACLYRLKTLDVAXXXXXXXXXGLGYLKHLNHFIVDGNPMRAIRRSVISSGCESLKKYLRTRGP 360          
BLAST of mRNA_P-wetherbeei_contig1653.3.1 vs. uniprot
Match: A0A2P4Y438_9STRA (Leucine-rich repeat-containing protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y438_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 1.370e-16
Identity = 146/341 (42.82%), Postives = 183/341 (53.67%), Query Frame = 2
Query:  203 AASVLIHACRLARSSGKLLLSNRNLTSFPSEALRPQENTAAGDEKWWEALPLQHCDLTHNAIIELPVDLCRLDTLVVLRASHNALTALPS--LELPALXXXXXXXXXXXXXXNGFGDGLPSLRELVANNNHLVALPESLGRASALSTLRVAQNRLTSLPDAIGAXXXXWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFPTLPLPAPELAQVLLGHNALRAVDPAALLALAPACVELHLQSNGIAVLPAEVGAMAALRVLQVAXXXXXXXXXXXXXXXXXXXXXXSGNPLKAVRRTLLEGGIEDLKKYLRTRG 1219
            A   +  A R AR +G L L  RNLT FPS+    +E+    DEK WE + L   DL+HNAI  +  ++  L +++ ++ + NAL  LP    EL AL              +     L  L+ELV + N L  LP S+                         XXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   FP LP  A  L QV LG+N L  +D  ++L +  +   L ++ N +  LP  +  +  L+ L VA                       GNPL+A+RR+++  G E LKKYLRTRG
Sbjct:   20 ARDQVTRALREARRTGILSLPARNLTEFPSQVYHLEEHLEK-DEKKWECIDLVKIDLSHNAIQSISDEIAGLTSVMSIKLTKNALQVLPEGFFELKALTYLDLSHNQLEQDLSENIGALTGLKELVLSGNKLSRLPNSITLLENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVVFPVLPEGA-ALDQVFLGYNTLSTIDEVSILRVKDSVTVLDMRDNKLPGLPVNIACLYRLKTLDVANNDLSDLPPGLGYLKHLNHFIVDGNPLRAIRRSVISAGCESLKKYLRTRG 358          
BLAST of mRNA_P-wetherbeei_contig1653.3.1 vs. uniprot
Match: A0A5D6XXC4_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XXC4_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 5.120e-16
Identity = 163/334 (48.80%), Postives = 202/334 (60.48%), Query Frame = 2
Query:  224 ACRLARSSGKLLLSNRNLTSFPSEALRPQENTAAGDEKWWEALPLQHCDLTHNAIIELPVDLCRLDTLVVLRASHNALTALPS--LELPALXXXXXXXXXXXXXXNGFGDGLPSLRELVANNNHLVALPESLGRASALSTLRVAQNRLTSLPDAIGAXXXXWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFPTLPLPAPELAQVLLGHNALRAVDPAALLALAPACVELHLQSNGIAVLPAEVGAMAALRVLQVAXXXXXXXXXXXXXXXXXXXXXXSGNPLKAVRRTLLEGGIEDLKKYLRTRG 1219
            A R AR +G L L  RNL++FP E    +E+    DEK WE + L   D++HN+I EL  D+  L T+   + + N L  LP    +L AL              +     L +L+EL    N L+ALP+SL                         XXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  +FP LP  A  L QV LG+NAL +++  ++L +  +   L ++ N +++LPA V  +  L+ L   XXXXXXXXXXXXXXXXX      GNPL+A+RR++L  G E LKKYLRTRG
Sbjct:   18 ALREARRTGVLSLPARNLSAFPREVYHLEEHMDK-DEKKWECVDLVKIDVSHNSIPELADDIGGLATVTSFKLAQNGLQTLPDGFFQLTALIYLDLSHNQLQRDLSEHIGALVNLKELGLAANKLIALPQSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVAFPVLPESA-ALDQVFLGYNALASINEDSVLRVKDSITVLDMRDNKLSILPATVACLHRLKTLXXXXXXXXXXXXXXXXXXXXNHIVVDGNPLRAIRRSVLSAGCESLKKYLRTRG 349          
BLAST of mRNA_P-wetherbeei_contig1653.3.1 vs. uniprot
Match: A0A329S1P8_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329S1P8_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 2.770e-15
Identity = 156/334 (46.71%), Postives = 191/334 (57.19%), Query Frame = 2
Query:  224 ACRLARSSGKLLLSNRNLTSFPSEALRPQENTAAGDEKWWEALPLQHCDLTHNAIIELPVDLCRLDTLVVLRASHNALTALPS--LELPALXXXXXXXXXXXXXXNGFGDGLPSLRELVANNNHLVALPESLGRASALSTLRVAQNRLTSLPDAIGAXXXXWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFPTLPLPAPELAQVLLGHNALRAVDPAALLALAPACVELHLQSNGIAVLPAEVGAMAALRVLQVAXXXXXXXXXXXXXXXXXXXXXXSGNPLKAVRRTLLEGGIEDLKKYLRTRG 1219
            A R AR +G L L  RNLT FPS+    +E+    DEK WE + L   DL+HNAI  +  ++  L ++  ++ + NAL  LP    EL  L              +     L  L+ELV + N L  LP S+                         XXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   FP LP  A  L QV LG+N+L  VD  ++L +  +   L ++ N +A LPA +  +  L+ L   XXXXXXXXXXX            GNPL+A+RR+++  G E LKKYLRTRG
Sbjct:   27 ALREARRTGVLSLPARNLTEFPSQVYHLEEHLEK-DEKKWECIDLVKIDLSHNAIPSISDEIGGLTSVTSIKLTKNALQVLPERFFELQTLTYLDLSYNRLEQDLSESFGALAGLKELVLSGNKLSRLPNSITLLENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVVFPVLPEGA-ALDQVYLGYNSLSTVDETSILRVKDSVTVLDMRDNKLAGLPANIACLYRLKTLXXXXXXXXXXXXXXGYLKHLNHFIVDGNPLRAIRRSVISAGCESLKKYLRTRG 358          
BLAST of mRNA_P-wetherbeei_contig1653.3.1 vs. uniprot
Match: K3X9W3_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X9W3_GLOUD)

HSP 1 Score: 90.1 bits (222), Expect = 6.550e-15
Identity = 176/362 (48.62%), Postives = 211/362 (58.29%), Query Frame = 2
Query:  224 ACRLARSSGKLLLSNRNLTSFPSEALRPQENTAAGDEKWWEALPLQHCDLTHNAIIELPVDLCRLDTLVVLRASHNALTALPSLELPALXXXXXXXXXXXXXXNGFGDGLPSLRELVANNNHLVA-LPESLGRASALSTLRVAQNRLTSLPDAIGAXXXXWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS-----------------------FPTLPLPAPELAQVLLGHNALRAVDPAALLALAPACVELHLQSNGIAVLPAEVGAMAALRVLQVAXXXXXXXXXXXXXXXXXXXXXXSGNPLKAVRRTLLEGGIEDLKKYLRTRGPAYSPP 1237
            A R AR SG L L  R LT FP E    +E+    DEK WE + L   D++HNAI  +  D+  L T+  ++   N LTALP                      GF + L  L  L  ++N L   L ESLG    L  L +A N+LTSLP     XXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                        FP LP+ A  L QV +G+N L ++D A++L +  +   L ++ N ++ LPA +  +  L+     XXXXXXXXXXXXXXXXXX     GNPL+A+RR++L  G E LKKYLRTRG   SPP
Sbjct:   18 AFREARRSGFLSLPARGLTEFPREVYHLEEHMDK-DEKKWECVDLVKIDMSHNAIPSIAGDIAGLTTVTSMKLCQNVLTALPE---------------------GFFE-LTGLTYLDLSHNQLQQDLSESLGVLINLRELGLAANKLTSLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVIFPVLPVSA-ALDQVFIGYNVLSSIDEASVLCVKDSITVLDVRDNKLSELPANIACLYRLKTXXXXXXXXXXXXXXXXXXXXXXHIVIDGNPLRAIRRSILSAGCESLKKYLRTRG---SPP 352          
BLAST of mRNA_P-wetherbeei_contig1653.3.1 vs. uniprot
Match: G4YY36_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YY36_PHYSP)

HSP 1 Score: 84.3 bits (207), Expect = 4.180e-13
Identity = 152/362 (41.99%), Postives = 183/362 (50.55%), Query Frame = 2
Query:  206 ASVLIHACRLARSSGKLLLSNRNLTSFPSEALRPQENTAAGDEKWWEALPLQHCDLTHNAIIELPVDLCRLDTLVVLRASHNALTALPSLELPALXXXXXXXXXXXXXXNGFGDGLPSLRELVANNNHLVA-LPESLGRASALSTLRVAQNRLTSLPDAIGAXXXXWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS-----------------------FPTLPLPAPELAQVLLGHNALRAVDPAALLALAPACVELHLQSNGIAVLPAEVGAMAALRVLQVAXXXXXXXXXXXXXXXXXXXXXXSGNPLKAVRRTLLEGGIEDLKKYLRTRG 1219
            AS +    RLAR SG L LS+R+  SFP E  R  E     DE+ WE   L+  DL++N I ELP  +  L  LV  +  HN L  LP                           L +L  L  +NN L   LPE LG+   L  L +  N+LT L      XXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                        FP LP     L Q+ LG N LR +    +L +  +   L ++ N +  L  ++  +  L+ L V                        GNPL++VRR+++ GG E LKKYLRTRG
Sbjct:   21 ASAMARTLRLARQSGSLNLSSRDFQSFPEEVFRLYE-LLGEDERSWECAVLRKLDLSYNDISELPTQVETLKYLVSFKMRHNRLRHLPLAVW----------------------NLETLTSLDLSNNELEGCLPEQLGKLDKLRELGLEGNKLTKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLEVFPMLPENNSSLDQLFLGFNTLREIPEEIVLNVKESLTVLDVRDNKLQRLSGKIPQLYRLKTLDVTNNDLHDLPAGLGYLKYLDHLLVDGNPLRSVRRSIISGGTEPLKKYLRTRG 359          
BLAST of mRNA_P-wetherbeei_contig1653.3.1 vs. uniprot
Match: A0A2P4XSH0_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XSH0_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 3.280e-12
Identity = 152/361 (42.11%), Postives = 185/361 (51.25%), Query Frame = 2
Query:  209 SVLIHACRLARSSGKLLLSNRNLTSFPSEALRPQENTAAGDEKWWEALPLQHCDLTHNAIIELPVDLCRLDTLVVLRASHNALTALPSLELPALXXXXXXXXXXXXXXNGFGDGLPSLRELVANNNHLVA-LPESLGRASALSTLRVAQNRLTSLPDAIGAXXXXWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS-----------------------FPTLPLPAPELAQVLLGHNALRAVDPAALLALAPACVELHLQSNGIAVLPAEVGAMAALRVLQVAXXXXXXXXXXXXXXXXXXXXXXSGNPLKAVRRTLLEGGIEDLKKYLRTRG 1219
            S +    +LAR SG L LS+R+L +FP E  R  E T   DE  WE   LQ  DL++N I E+P  +  L  L+  +  HN L  LP     AL                    L +L  L  +NN L   L E LG+   L  L +  N+LT LP+    XXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                        FP LP     L Q+ LG N LR V    +L++  +   L L+ N +  L   +  +  L+ L V                        GNPL+++RR+++  G E LKKYLRTRG
Sbjct:   23 SAMARTLKLARQSGSLNLSSRDLHAFPEEVFRLYE-TLDEDEHSWECAVLQKLDLSYNEIAEIPSQVETLKYLLSFKIRHNHLRQLPM----ALW------------------NLETLTSLDLSNNELEGCLSEQLGKLDKLRELGLEGNKLTQLPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLQVFPKLPENNACLDQLFLGFNLLREVPEDIVLSVKESLTVLDLRDNKLQHLSDRIPQLYRLKTLDVTNNDLHDLPPGFGYLKYLNHLLVEGNPLRSIRRSIISAGTEPLKKYLRTRG 360          
BLAST of mRNA_P-wetherbeei_contig1653.3.1 vs. uniprot
Match: A0A8K1CMS5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CMS5_PYTOL)

HSP 1 Score: 80.9 bits (198), Expect = 4.720e-12
Identity = 154/300 (51.33%), Postives = 188/300 (62.67%), Query Frame = 2
Query:  329 DEKWWEALPLQHCDLTHNAIIELPVDLCRLDTLVVLRASHNALTALPS--LELPALXXXXXXXXXXXXXXN-GFGDGLPSLRELVANNNHLVALPESLGRASALSTLRVAQNRLTSLPDAIGAXXXXWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFPTLPLPAPELAQVLLGHNALRAVDPAALLALAPACVELHLQSNGIAVLPAEVGAMAALRVLQVAXXXXXXXXXXXXXXXXXXXXXXSGNPLKAVRRTLLEGGIEDLKKYLRTRG 1219
            DEK WE + L   DL+HNAI  +  ++  L T+  ++   N LT+LP    EL AL              + GFG  L +L+EL    N L  LP+++G        R+ +            XXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    FP LP  A  L QV LG+NAL  +D  ++L    +   L L+ N +++LPA +  +  L+ L   XXXXXXXXXXXXXXXXXXXX   GNPL+A+RR++L  G E +KKYLRTRG
Sbjct:    4 DEKKWECVDLVKIDLSHNAIPSISDEIGALATVSSIKLCQNTLTSLPEGLFELTALTYLDLSHNQLQGKLSEGFG-ALVNLKELGLAANKLQTLPDAIGXXXXXXVXRIEEXAXIQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIVVFPNLPQSA-ALDQVFLGYNALAQIDEDSILRAKDSMTVLELRDNKLSLLPANIACLYRLKTLXXXXXXXXXXXXXXXXXXXXXXXVIDGNPLRAIRRSVLSAGCEAVKKYLRTRG 301          
BLAST of mRNA_P-wetherbeei_contig1653.3.1 vs. uniprot
Match: A0A3F2RWM2_9STRA (Uncharacterized protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RWM2_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 2.890e-11
Identity = 141/300 (47.00%), Postives = 173/300 (57.67%), Query Frame = 2
Query:  329 DEKWWEALPLQHCDLTHNAIIELPVDLCRLDTLVVLRASHNALTALPS--LELPALXXXXXXXXXXXXXXNGFGDGLPSLRELVANNNHLVALPESLGRASALSTLRVAQNRLTSLPDAIGAXXXXWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFPTLPLPAPELAQVLLGHNALRAVDPAALLALAPACVELHLQSNGIAVLPAEVGAMAALRVLQVAXXXXXXXXXXXXXXXXXXXXXXSGNPLKAVRRTLLEGGIEDLKKYLRTRGP 1222
            DEK WE + L   DL+HN+I  +  ++  L ++  ++   NAL  LP    EL  L              +     L SL+ELV + N L  LP S+G                        XXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    FP LP  A  L QV LG+N L ++D  ++L +  +   L ++ N +  LP  +  +  L+ L VAXXXXXXXXXXX            GNPL+A+RR+++  G E LKKYLRTRGP
Sbjct:    4 DEKKWECVDLVKIDLSHNSIPAISDEIATLTSVTSIKLCQNALQTLPEGFFELQTLTYLDLSHNQLDQNLSERFGALTSLKELVLSGNKLSCLPNSIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLVVFPVLPEGA-ALDQVFLGYNTLSSIDEISILRIEDSVTILDMRDNKLQGLPTNLACLYRLKTLDVAXXXXXXXXXXXGYLKHLNHFIVDGNPLRAIRRSVISSGCEALKKYLRTRGP 302          
BLAST of mRNA_P-wetherbeei_contig1653.3.1 vs. uniprot
Match: A0A662Y2S4_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y2S4_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 9.680e-11
Identity = 151/306 (49.35%), Postives = 184/306 (60.13%), Query Frame = 2
Query:  329 DEKWWEALPLQHCDLTHNAIIELPVDLCRLDTLVVLRASHNALTALPS--LELPALXXXXXXXXXXXXXXNGFGDGLPSLRELVANNNHLVALPESLGRASALSTLRVAQNRLTSLPDAIGAXXXXWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFPTLPLPAPELAQVLLGHNALRAVDPAALLALAPACVELHLQSNGIAVLPAEVGAMAALRVLQVAXXXXXXXXXXXXXXXXXXXXXXSGNPLKAVRRTLLEGGIEDLKKYLRTRGPAYSPPA 1240
            DEK WE + L   DL+HNAI  +  ++  L T+  L+   NAL +LP    EL AL              +     L +L+EL  + N L  LP+S+ +                       XXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   FP LP  A  L QV LG+NAL  +D A++L +  +   L ++ N +  LPA +  +  L+ L   XXXXXXXXXXXXXXXX       GNPL+A+RR+++  G E LKKYLRTRG   +PPA
Sbjct:    4 DEKKWECVDLVKIDLSHNAIPSISDEIAALTTVTSLKLCKNALQSLPDGFFELQALSYLDLSHNQLQQDLSESFGALVNLKELALSANQLSRLPDSICQLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVVFPVLPEGA-ALDQVFLGYNALSNIDEASILRVKDSITILDMRDNKLTGLPANLACLYRLKTLXXXXXXXXXXXXXXXXXXXLSHILVDGNPLRAIRRSVISAGCEALKKYLRTRG---APPA 305          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1653.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6G0PK55_9STRA6.140e-1846.27Uncharacterized protein n=6 Tax=Phytophthora TaxID... [more]
A0A2P4Y438_9STRA1.370e-1642.82Leucine-rich repeat-containing protein n=1 Tax=Phy... [more]
A0A5D6XXC4_9STRA5.120e-1648.80Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A329S1P8_9STRA2.770e-1546.71Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
K3X9W3_GLOUD6.550e-1548.62Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
G4YY36_PHYSP4.180e-1341.99Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]
A0A2P4XSH0_9STRA3.280e-1242.11Uncharacterized protein n=1 Tax=Phytophthora palmi... [more]
A0A8K1CMS5_PYTOL4.720e-1251.33Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A3F2RWM2_9STRA2.890e-1147.00Uncharacterized protein n=1 Tax=Phytophthora kerno... [more]
A0A662Y2S4_9STRA9.680e-1149.35Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1653contigP-wetherbeei_contig1653:1232..4151 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LFI7
PFAMsLRR_1,LRR_8
Model size2172
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons5
Evalue6.08e-23
EggNOG OGsCOG4886@1|root,KOG0472@2759|Eukaryota
Ec32 ortholog descriptionHypothetical leucine rich repeat protein
Ec32 orthologEc-04_002040.1
DescriptionLeucine-rich repeats, outliers
Cds size1857
COG categoryL
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1653.3.1prot_P-wetherbeei_contig1653.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1653 1299..3903 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186089.7487588-UTR-P-wetherbeei_contig1653:1231..12981683186089.7487588-UTR-P-wetherbeei_contig1653:1231..1298Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1653 1232..1298 +
1683186089.8095393-UTR-P-wetherbeei_contig1653:3903..41511683186089.8095393-UTR-P-wetherbeei_contig1653:3903..4151Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1653 3904..4151 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186089.7623365-CDS-P-wetherbeei_contig1653:1298..15771683186089.7623365-CDS-P-wetherbeei_contig1653:1298..1577Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1653 1299..1577 +
1683186089.7721994-CDS-P-wetherbeei_contig1653:1675..18931683186089.7721994-CDS-P-wetherbeei_contig1653:1675..1893Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1653 1676..1893 +
1683186089.782442-CDS-P-wetherbeei_contig1653:2066..22911683186089.782442-CDS-P-wetherbeei_contig1653:2066..2291Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1653 2067..2291 +
1683186089.7934406-CDS-P-wetherbeei_contig1653:2576..28901683186089.7934406-CDS-P-wetherbeei_contig1653:2576..2890Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1653 2577..2890 +
1683186089.8018024-CDS-P-wetherbeei_contig1653:3082..39031683186089.8018024-CDS-P-wetherbeei_contig1653:3082..3903Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1653 3083..3903 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1653.3.1

>prot_P-wetherbeei_contig1653.3.1 ID=prot_P-wetherbeei_contig1653.3.1|Name=mRNA_P-wetherbeei_contig1653.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=619bp
MEGREVKPLARQGSQHRVGFRNGQTAAGRGMRRPPFHGTGTLDEGAASVL
IHACRLARSSGKLLLSNRNLTSFPSEALRPQENTAAGDEKWWEALPLQHC
DLTHNAIIELPVDLCRLDTLVVLRASHNALTALPSLELPALTMLDCSHNA
IAALPNGFGDGLPSLRELVANNNHLVALPESLGRASALSTLRVAQNRLTS
LPDAIGALSALWELDASQNDLAALPASLAWLSALRQLLLQRNRIRAVGGA
LCGLSRLAVLDLRENLLESFPTLPLPAPELAQVLLGHNALRAVDPAALLA
LAPACVELHLQSNGIAVLPAEVGAMAALRVLQVADNDIARLPPELGYLQN
LTRLAVSGNPLKAVRRTLLEGGIEDLKKYLRTRGPAYSPPAAAAAAAAPG
EGGRGGPIGGDGGISGISCGWTGDSGTCDERSGCTGRGGGGGGGGHNRVG
RPLEIAEAELGINCQQLGGAALPPNWRGASAQGRNRQQPAARPQKGLQGD
ELPDQYAAGQFGDGPLATSAHVAAAPLAMAAMAPIAATAASTPAMARMAA
AAAMAAATEAAQRATWLRAEADRFEEEAARPGLSQAKQFALKREARMARA
ALLREERALREREVVVPA*
back to top

mRNA from alignment at P-wetherbeei_contig1653:1232..4151+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1653.3.1 ID=mRNA_P-wetherbeei_contig1653.3.1|Name=mRNA_P-wetherbeei_contig1653.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2920bp|location=Sequence derived from alignment at P-wetherbeei_contig1653:1232..4151+ (Phaeothamnion wetherbeei SAG_119_79)
ATAAAAAAGTATGTAGGAGCTTGCACCTACATCGCCGCGTCACCTATTTT CACGCTATCTACGCACCATGGAGGGGAGGGAGGTGAAGCCTCTCGCCCGA CAAGGGTCGCAGCATCGAGTCGGTTTTCGAAATGGTCAAACGGCGGCCGG AAGAGGAATGCGGCGGCCGCCTTTCCACGGCACAGGCACGCTGGACGAAG GCGCGGCTTCCGTCCTAATCCACGCATGTCGTTTGGCGCGGTCATCCGGT AAGCTGCTGCTGAGCAACCGGAACCTCACTTCGTTCCCTTCCGAGGCGCT CCGGCCCCAAGAAAACACGGCCGCAGGCGACGAGAAATGGTGGGAGGCGA GTGACACTGTGGTGTGCCACTGAGGTCTTCGACGTTGCACTTTTCGGAAA GGGCCGTGCTAAATTAAGATCCCCTTGTCTTGCTGCATAACCAGGCCCTC CCACTGCAACACTGCGATCTGACGCACAACGCCATTATAGAGCTGCCTGT GGACCTGTGCCGCCTGGACACGCTTGTGGTGCTTCGGGCGTCCCACAACG CGCTGACGGCGCTGCCATCATTGGAGCTCCCCGCCCTCACAATGCTCGAC TGCAGCCACAACGCAATTGCGGCGCTGCCTAACGGCTTTGGCGACGGCCT GCCCTCCCTCAGGTAGGTATTACGTACCTTTTGTGTAGAAACGAAACCAG CAGGCGAAAATCAGCTAAGGTTTTGCCGCATTCAAGATCGATATTTACCA CCATTCGTTCCCTTGAGCATTCTTCGTTTATCTTCAATACCAGGGCCGAC GCTCTCACCTAATTTTTACACAAAACGTCCATCAGGGAGTTGGTCGCCAA CAACAACCACCTTGTCGCCCTGCCCGAGTCCCTGGGGCGTGCTTCGGCTC TGTCAACGCTGCGCGTGGCGCAGAACCGCTTGACGTCGCTGCCGGACGCT ATCGGCGCGCTGTCAGCGCTGTGGGAACTCGACGCCAGCCAGAATGATCT TGCGGCGCTGCCAGCGTCGCTGGCATGGCTCTCAGCGCTGCGGCAGCTGC TGCTGCAGAGGTGAGTCTTACGCTGAGGGCTTATGCGGTTTTGGAGGGAG AGAGCGAGATGAGGAGGTGAGGGCGAAGCGCACGCTTGTGGTGCCTGATG CGTTCCAGAGAACACATTTTTTCTATCGGCACTGCCGCTCATGCCTTCTT GCCGCTGCTGCCGCCTTCTTTGCTGCCGCCACCACCGCGACGATCCCGTC GACGTTGCCGCTGCCTTTCCGGTGCCGCCTTTGCCGCTTCCTCCGCCTCG GCCTCCTGATCCTCCACCTCTCGCTCCACCAACAACCACCGCCAGGAACC GCATCCGCGCCGTGGGCGGGGCGCTGTGCGGCCTGTCGCGCCTCGCGGTG CTCGACCTGCGGGAGAACCTCCTTGAATCGTTTCCCACCCTGCCGTTGCC CGCGCCGGAGCTTGCGCAGGTCCTACTTGGACACAACGCGCTGCGGGCGG TCGACCCTGCGGCGCTGCTGGCGTTGGCGCCGGCCTGCGTCGAGCTGCAC CTGCAGAGCAACGGCATTGCAGTGCTGCCGGCCGAAGTCGGGGCGATGGC CGCGTTGCGGGTGCTGCAGGTCGCCGACAACGACATTGCACGGCTGCCGC CCGAGCTCGGTGGGTATAATAGGGAATTGAAAAACGGCGAGAGGGAAAGA GAGAAAGAGATAGGACGAAGCGGAGGAATCCCTTTTTGCCAATCTTTGGC TCGGTGCCTTCCATGGGTACGCTAAGCTTCACACCTTCCATTTGTCGTTA CCTACCTCTTTCTCTGCTGATTGTGACTTCTACGGCATTGCAACCAATCA GGCTACCTACAGAACCTCACCCGGCTGGCTGTGTCGGGAAACCCGCTCAA GGCGGTACGGCGCACCTTGCTGGAGGGGGGCATCGAAGACTTGAAGAAGT ACCTGAGGACGCGGGGCCCGGCCTACTCGCCCCCTGCGGCTGCAGCTGCA GCCGCAGCCCCCGGTGAGGGCGGCCGTGGTGGCCCCATAGGCGGTGATGG CGGAATCAGCGGGATTAGCTGCGGGTGGACTGGCGACAGCGGGACCTGCG ACGAACGCAGCGGCTGTACCGGCCGCGGCGGCGGGGGTGGCGGCGGCGGC CACAATCGTGTCGGCCGTCCCTTGGAGATTGCAGAGGCGGAGCTGGGCAT CAACTGCCAGCAGCTAGGCGGTGCCGCTTTGCCGCCCAATTGGCGCGGCG CCTCTGCCCAAGGTCGGAACCGTCAACAACCTGCAGCACGGCCGCAAAAG GGTCTTCAAGGTGACGAATTGCCGGACCAATACGCCGCCGGTCAGTTCGG CGACGGGCCCTTGGCCACATCTGCTCATGTGGCGGCGGCGCCGCTGGCGA TGGCGGCGATGGCGCCGATAGCGGCGACTGCGGCGAGCACGCCGGCAATG GCACGGATGGCGGCGGCGGCGGCGATGGCCGCTGCGACCGAGGCGGCGCA GAGAGCGACTTGGCTTCGCGCGGAGGCGGATCGGTTTGAAGAGGAGGCGG CGCGGCCCGGTTTGTCGCAGGCGAAGCAGTTCGCGCTCAAGAGGGAGGCG CGGATGGCACGGGCGGCGCTGCTGCGGGAAGAGCGGGCGCTGCGGGAGAG GGAGGTCGTCGTGCCGGCGTGAATCGATTTAGATTACAGGTTAAGGTTTA CTATTAGAGGGCGAGGGCCTTGCGCAGCGCGCTTCTCCGGCGCTTTTACG TGATTCTTTCTTTCATGGTTGCATGGGAGCCGCTGCCGCTATCATGGAAA GGGAAGGCAGCTTTCAACGGTCCTGCCGCTGCGGCTCCCGCCCGCGCCTG TCGGCGCCGCTGCCACCACACTGTTTATCGATCGCTTTTGCTGTTTCGCT ACTCGGGGCGCCAACCACCC
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig1653:1232..4151+

>mRNA_P-wetherbeei_contig1653.3.1 ID=mRNA_P-wetherbeei_contig1653.3.1|Name=mRNA_P-wetherbeei_contig1653.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1857bp|location=Sequence derived from alignment at P-wetherbeei_contig1653:1232..4151+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGAGGGGAGGGAGGTGAAGCCTCTCGCCCGACAAGGGTCGCAGCATCG
AGTCGGTTTTCGAAATGGTCAAACGGCGGCCGGAAGAGGAATGCGGCGGC
CGCCTTTCCACGGCACAGGCACGCTGGACGAAGGCGCGGCTTCCGTCCTA
ATCCACGCATGTCGTTTGGCGCGGTCATCCGGTAAGCTGCTGCTGAGCAA
CCGGAACCTCACTTCGTTCCCTTCCGAGGCGCTCCGGCCCCAAGAAAACA
CGGCCGCAGGCGACGAGAAATGGTGGGAGGCCCTCCCACTGCAACACTGC
GATCTGACGCACAACGCCATTATAGAGCTGCCTGTGGACCTGTGCCGCCT
GGACACGCTTGTGGTGCTTCGGGCGTCCCACAACGCGCTGACGGCGCTGC
CATCATTGGAGCTCCCCGCCCTCACAATGCTCGACTGCAGCCACAACGCA
ATTGCGGCGCTGCCTAACGGCTTTGGCGACGGCCTGCCCTCCCTCAGGGA
GTTGGTCGCCAACAACAACCACCTTGTCGCCCTGCCCGAGTCCCTGGGGC
GTGCTTCGGCTCTGTCAACGCTGCGCGTGGCGCAGAACCGCTTGACGTCG
CTGCCGGACGCTATCGGCGCGCTGTCAGCGCTGTGGGAACTCGACGCCAG
CCAGAATGATCTTGCGGCGCTGCCAGCGTCGCTGGCATGGCTCTCAGCGC
TGCGGCAGCTGCTGCTGCAGAGGAACCGCATCCGCGCCGTGGGCGGGGCG
CTGTGCGGCCTGTCGCGCCTCGCGGTGCTCGACCTGCGGGAGAACCTCCT
TGAATCGTTTCCCACCCTGCCGTTGCCCGCGCCGGAGCTTGCGCAGGTCC
TACTTGGACACAACGCGCTGCGGGCGGTCGACCCTGCGGCGCTGCTGGCG
TTGGCGCCGGCCTGCGTCGAGCTGCACCTGCAGAGCAACGGCATTGCAGT
GCTGCCGGCCGAAGTCGGGGCGATGGCCGCGTTGCGGGTGCTGCAGGTCG
CCGACAACGACATTGCACGGCTGCCGCCCGAGCTCGGCTACCTACAGAAC
CTCACCCGGCTGGCTGTGTCGGGAAACCCGCTCAAGGCGGTACGGCGCAC
CTTGCTGGAGGGGGGCATCGAAGACTTGAAGAAGTACCTGAGGACGCGGG
GCCCGGCCTACTCGCCCCCTGCGGCTGCAGCTGCAGCCGCAGCCCCCGGT
GAGGGCGGCCGTGGTGGCCCCATAGGCGGTGATGGCGGAATCAGCGGGAT
TAGCTGCGGGTGGACTGGCGACAGCGGGACCTGCGACGAACGCAGCGGCT
GTACCGGCCGCGGCGGCGGGGGTGGCGGCGGCGGCCACAATCGTGTCGGC
CGTCCCTTGGAGATTGCAGAGGCGGAGCTGGGCATCAACTGCCAGCAGCT
AGGCGGTGCCGCTTTGCCGCCCAATTGGCGCGGCGCCTCTGCCCAAGGTC
GGAACCGTCAACAACCTGCAGCACGGCCGCAAAAGGGTCTTCAAGGTGAC
GAATTGCCGGACCAATACGCCGCCGGTCAGTTCGGCGACGGGCCCTTGGC
CACATCTGCTCATGTGGCGGCGGCGCCGCTGGCGATGGCGGCGATGGCGC
CGATAGCGGCGACTGCGGCGAGCACGCCGGCAATGGCACGGATGGCGGCG
GCGGCGGCGATGGCCGCTGCGACCGAGGCGGCGCAGAGAGCGACTTGGCT
TCGCGCGGAGGCGGATCGGTTTGAAGAGGAGGCGGCGCGGCCCGGTTTGT
CGCAGGCGAAGCAGTTCGCGCTCAAGAGGGAGGCGCGGATGGCACGGGCG
GCGCTGCTGCGGGAAGAGCGGGCGCTGCGGGAGAGGGAGGTCGTCGTGCC
GGCGTGA
back to top