mRNA_P-wetherbeei_contig16510.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig16510.1.1
Unique NamemRNA_P-wetherbeei_contig16510.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig16510.1.1 vs. uniprot
Match: A0A7C2M1M3_9HYPH (Shikimate dehydrogenase (NADP(+)) n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C2M1M3_9HYPH)

HSP 1 Score: 360 bits (925), Expect = 2.680e-122
Identity = 189/293 (64.51%), Postives = 221/293 (75.43%), Query Frame = 1
Query:    1 MINRQALVGLIGGNIMKSLSPALHHDAFAAAGIDGFYHLMDVDKLPGRKLPQLLEAARTAGFAGTNVTFPFKQDVLALLDAVDPEARQIGAVNTVVFAPDGRSTGYNTDRRGFRRSFEEGLGRAAADGKTAVQVGAGGAGRAVAFALMDLGVARLILHDREPAQVKALLADLAAHFGAARSQLSTDLAAEVAAVDGVVNATPVGMAGIPGNPVPADALHKGQWAADVIYTPIETAFIKAAAAKGCRVLTGGGMCVHQAAEAFRLFTGIEPDSKRMHRVFAEALARRDGALKEA 879
            M  +  L+GL+G NIM SLSPALH DA AAAG+ G YHLMD+D+LPGR L  LL A R  GFAG NVTFP KQ +L LLD +  EAR+IGAVNTV  A DGR+ G+NTDR GFRRSFEEGLGRA+ +G+ AV VGAGGAGRAVAFALMDLG A + +HD +  +  +L ADLA H+GAARS+ +   A  +A   GVVNATP+GM GIPG P+PA+ALH   W ADVIY+P+ET  + AA AKGCR LTG GMC+HQAAEAFRLFTG+  D +RM RVFA ALARRD  L  A
Sbjct:    1 MTGQHKLIGLVGANIMASLSPALHEDALAAAGLRGSYHLMDLDRLPGRTLESLLAAVREVGFAGINVTFPCKQAILPLLDEISAEAREIGAVNTVTIAADGRTCGHNTDRTGFRRSFEEGLGRASVEGREAVLVGAGGAGRAVAFALMDLGAAVVHVHDVDAGRAGSLAADLARHYGAARSRPAASPAQALAEAAGVVNATPIGMTGIPGMPLPAEALHARLWVADVIYSPVETELVLAARAKGCRTLTGAGMCIHQAAEAFRLFTGLSADVERMRRVFAAALARRDAGLAPA 293          
BLAST of mRNA_P-wetherbeei_contig16510.1.1 vs. uniprot
Match: A0A363TED2_9BRAD (Shikimate dehydrogenase (NADP(+)) n=1 Tax=Bradyrhizobiaceae bacterium TaxID=2072420 RepID=A0A363TED2_9BRAD)

HSP 1 Score: 356 bits (913), Expect = 1.500e-120
Identity = 189/290 (65.17%), Postives = 219/290 (75.52%), Query Frame = 1
Query:   13 QALVGLIGGNIMKSLSPALHHDAFAAAGIDGFYHLMDVDKLPGRKLPQLLEAARTAGFAGTNVTFPFKQDVLALLDAVDPEARQIGAVNTVVFAPDGRSTGYNTDRRGFRRSFEEGLGRAAADGKTAVQVGAGGAGRAVAFALMDLGVARLILHDREPAQVKALLADLAAHFGAARSQLSTDLAAEVAAVDGVVNATPVGMAGIPGNPVPADALHKGQWAADVIYTPIETAFIKAAAAKGCRVLTGGGMCVHQAAEAFRLFTGIEPDSKRMHRVFAEALARRDGALKEAV 882
            +ALVGL+G NI+KSLSPALH DAFAAAGI+G YHLMD+D L GR+L  +L+A R AGFAG NVT P+K+ VLALLD V  EARQIGAVNTVV  P  R  GYNTDR GF R+FEEGLG A+A G+  + +GAGGAGRAVAFALMDLG  RL +HD++ A+  AL ADL   FGA R +++ D+AA +A   GVVNATPVGM G PG PVPA  +    W ADVIYTP+ET  + AA AKGCRV+TG GMCVHQAAEAFRLFTG+ PD +RM R F  A  RRD AL  AV
Sbjct:    3 RALVGLVGHNILKSLSPALHEDAFAAAGIEGHYHLMDLDVLKGRRLADILQAVRIAGFAGINVTHPYKEAVLALLDEVSAEARQIGAVNTVVIDPTDRLIGYNTDRIGFHRAFEEGLGAASAAGRPVLLLGAGGAGRAVAFALMDLGAGRLFVHDKDQARATALGADLIMRFGAERCEVAMDVAAALAEAAGVVNATPVGMLGYPGTPVPAALVAPRHWVADVIYTPLETGLVAAARAKGCRVMTGAGMCVHQAAEAFRLFTGLAPDVRRMARTFEAACTRRDAALAAAV 292          
BLAST of mRNA_P-wetherbeei_contig16510.1.1 vs. uniprot
Match: A0A8J7N5X2_9PROT (Shikimate dehydrogenase (NADP(+)) n=1 Tax=Candidatus Odyssella sp. TaxID=2589116 RepID=A0A8J7N5X2_9PROT)

HSP 1 Score: 338 bits (867), Expect = 1.410e-113
Identity = 180/290 (62.07%), Postives = 216/290 (74.48%), Query Frame = 1
Query:   10 RQALVGLIGGNIMKSLSPALHHDAFAAAGIDGFYHLMDVDKLPGRKLPQLLEAARTAGFAGTNVTFPFKQDVLALLDAVDPEARQIGAVNTVVFAPDGRSTGYNTDRRGFRRSFEEGLGRAAADGKTAVQVGAGGAGRAVAFALMDLGVARLILHDREPAQVKALLADLAAHFGAARSQLSTDLAAEVAAVDGVVNATPVGMAGIPGNPVPADALHKGQWAADVIYTPIETAFIKAAAAKGCRVLTGGGMCVHQAAEAFRLFTGIEPDSKRMHRVFAEALARRDGALKEA 879
            ++AL+GL+G +I KSLSP LH DAFAAAGI G YHLMD+D L GR    LL AART GF G NVTFP K+ VL LLD + P+ARQIGAVNTV F   GR+ GYNTDR GFR SFEE LGRAA  G+  V VGAGGAGRAVAFAL+DLG A ++++D+E A+ +AL  DLAA FGA R     D AA +A   G VNATP+GM G PG P+P +A+    + ADV+YTP+ETA ++AA A+G RVL+GGGMCV QAAEAFRLFTGI PD+ RM R+F + +A RD AL+ A
Sbjct:    2 KRALLGLVGASIQKSLSPLLHEDAFAAAGIRGHYHLMDLDLLAGRSAADLLAAARTVGFTGVNVTFPCKEAVLPLLDEISPDARQIGAVNTVTFDRAGRTRGYNTDRPGFRMSFEETLGRAAVAGERVVLVGAGGAGRAVAFALLDLGAAAVLVYDKEAARSEALARDLAAAFGAGRGHAIADPAAALAGAAGAVNATPIGMLGFPGLPLPVEAIETRHFVADVVYTPLETALLRAARARGARVLSGGGMCVFQAAEAFRLFTGITPDAARMRRLFDDLVAARDAALRGA 291          
BLAST of mRNA_P-wetherbeei_contig16510.1.1 vs. uniprot
Match: A0A5C8PBG9_9HYPH (Shikimate dehydrogenase (NADP(+)) n=2 Tax=Vineibacter terrae TaxID=2586908 RepID=A0A5C8PBG9_9HYPH)

HSP 1 Score: 335 bits (859), Expect = 2.230e-112
Identity = 176/285 (61.75%), Postives = 206/285 (72.28%), Query Frame = 1
Query:   19 LVGLIGGNIMKSLSPALHHDAFAAAGIDGFYHLMDVDKLPGRKLPQLLEAARTAGFAGTNVTFPFKQDVLALLDAVDPEARQIGAVNTVVFAPDGRSTGYNTDRRGFRRSFEEGLGRAAADGKTAVQVGAGGAGRAVAFALMDLGVARLILHDREPAQVKALLADLAAHFGAARSQLSTDLAAEVAAVDGVVNATPVGMAGIPGNPVPADALHKGQWAADVIYTPIETAFIKAAAAKGCRVLTGGGMCVHQAAEAFRLFTGIEPDSKRMHRVFAEALARRDGALK 873
            LVGL+G NI +SLSPALH DAFAAAGI G YHLMDV +L GR+L  LL A RTAGFA  NVT PFK+ +L LLD V   ARQIGAVNTVV   DGR+ G+NTDR GFRR+FEE LG AAA G+  + +GAGGAGRAVAFALMDLGV RL++HD+E  +  AL ADL   FGA+R   +        AV G+VNATPVGM G PG+P+  D +  G W AD+IYTP+ET  I  A  +GCR +TGG MCVHQAA+AFRLFTG+ PD  RM  VF  A A RD A++
Sbjct:    2 LVGLVGSNITRSLSPALHEDAFAAAGIVGHYHLMDVSRLKGRQLDDLLAAVRTAGFAAINVTHPFKEAILPLLDEVSAGARQIGAVNTVVIDADGRTVGHNTDRSGFRRAFEETLGAAAAQGRQVLLLGAGGAGRAVAFALMDLGVERLLIHDKEQGRATALCADLIMRFGASRCAFAESPGLVAKAVAGIVNATPVGMTGYPGSPIAEDLVRSGHWVADIIYTPLETQLIAHARGRGCRTMTGGSMCVHQAADAFRLFTGLSPDISRMRSVFDRACAARDTAVR 286          
BLAST of mRNA_P-wetherbeei_contig16510.1.1 vs. uniprot
Match: A0A537S440_9PROT (Shikimate dehydrogenase (NADP(+)) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537S440_9PROT)

HSP 1 Score: 318 bits (816), Expect = 7.770e-106
Identity = 173/289 (59.86%), Postives = 201/289 (69.55%), Query Frame = 1
Query:    4 INRQALVGLIGGNIMKSLSPALHHDAFAAAGIDGFYHLMDVDKLPGRKLPQLLEAARTAGFAGTNVTFPFKQDVLALLDAVDPEARQIGAVNTVVFAPDGRSTGYNTDRRGFRRSFEEGLGRAAADGKTAVQVGAGGAGRAVAFALMDLGVARLILHDREPAQVKALLADLAAHFGAARSQLSTDLAAEVAAVDGVVNATPVGMAGIPGNPVPADALHKGQWAADVIYTPIETAFIKAAAAKGCRVLTGGGMCVHQAAEAFRLFTGIEPDSKRMHRVFAEALARRDGAL 870
            + +  LVGLIG NI KSLSPAL  DA  A GI G YHLMD+D+L GR L  L+ A R  GF G N+T+P K+ VL LLD V  EARQIGAVNTV F  +  + GYNTDR GFRR+FEE  GR   DGKTA+ VGAGGAGRAVAFAL DLGV  L++HD++  +   L  DL + FG  RSQ  TD+ + ++   G+VNATPVGM GIPG PVP   +    W ADVIYTP+ET  +K A AKGC+V+ G GMCVHQAAE FRLFTG  PD  RM R FAEA ARRD  L
Sbjct:    1 MQQHMLVGLIGANIQKSLSPALFEDACTAVGIRGHYHLMDLDQLRGRSLSDLMHAVRAVGFQGVNITYPCKEAVLLLLDEVSAEARQIGAVNTVTFDSNNWTVGYNTDRIGFRRAFEEAFGRDLIDGKTALLVGAGGAGRAVAFALFDLGVDVLLVHDKDMERAHRLADDLISKFGVGRSQPVTDVESGLSRAAGLVNATPVGMLGIPGIPVPLGVVASRLWVADVIYTPLETDLVKGARAKGCKVMGGAGMCVHQAAETFRLFTGHVPDIHRMQRAFAEAAARRDKRL 289          
BLAST of mRNA_P-wetherbeei_contig16510.1.1 vs. uniprot
Match: A0A5C5TI17_9HYPH (Shikimate dehydrogenase (NADP(+)) n=1 Tax=Reyranella sp. CPCC 100927 TaxID=2599616 RepID=A0A5C5TI17_9HYPH)

HSP 1 Score: 317 bits (813), Expect = 2.450e-105
Identity = 170/290 (58.62%), Postives = 202/290 (69.66%), Query Frame = 1
Query:    1 MINRQALVGLIGGNIMKSLSPALHHDAFAAAGIDGFYHLMDVDKLPGRKLPQLLEAARTAGFAGTNVTFPFKQDVLALLDAVDPEARQIGAVNTVVFAPDGRSTGYNTDRRGFRRSFEEGLGRAAADGKTAVQVGAGGAGRAVAFALMDLGVARLILHDREPAQVKALLADLAAHFGAARSQLSTDLAAEVAAVDGVVNATPVGMAGIPGNPVPADALHKGQWAADVIYTPIETAFIKAAAAKGCRVLTGGGMCVHQAAEAFRLFTGIEPDSKRMHRVFAEALARRDGAL 870
            M+ +  LVGLIG NI  SLSP LH DAFA AGI G YHLMDV++L GR+L  LL AARTAGFA  N+T PFK+ V+ LLD V   A+Q+GAVNTVV  P  R  G+NTDR GFRR+FEE LGR AA GK  + +GAGGAGRAVAFALMD+GV RL+++D E A+  AL ADL    G        D  +      G+VNATP+GM G  G P+    +   QW ADV+YTP+ET F+  A AKGCR +TGG MCVHQAA+AF+LFTG+ PD +RM RVF EA A RD AL
Sbjct:    1 MMRKSMLVGLIGSNITNSLSPVLHEDAFATAGIAGHYHLMDVNRLKGRQLETLLAAARTAGFAAVNITQPFKEAVIPLLDEVSAGAQQVGAVNTVVIDPSSRLIGHNTDRSGFRRAFEETLGRDAAAGKPVLLLGAGGAGRAVAFALMDVGVERLMIYDTEQARAAALCADLIVKSGITHGAFVADPKSAARTAAGIVNATPIGMLGHAGMPIDDALVRSEQWVADVVYTPLETQFVARARAKGCRAMTGGAMCVHQAADAFQLFTGLVPDVRRMRRVFDEACAGRDAAL 290          
BLAST of mRNA_P-wetherbeei_contig16510.1.1 vs. uniprot
Match: A0A521L1K9_9HYPH (Shikimate dehydrogenase n=1 Tax=Reyranella sp. TaxID=1929291 RepID=A0A521L1K9_9HYPH)

HSP 1 Score: 312 bits (800), Expect = 1.940e-103
Identity = 173/292 (59.25%), Postives = 207/292 (70.89%), Query Frame = 1
Query:    4 INRQALVGLIGGNIMKSLSPALHHDAFAAAGIDGFYHLMDVDKLPGRKLPQLLEAARTAGFAGTNVTFPFKQDVLALLDAVDPEARQIGAVNTVVFAPDGRSTGYNTDRRGFRRSFEEGLGRAAADGKTAVQVGAGGAGRAVAFALMDLGVARLILHDREPAQVKALLADLAAHFGAARSQLSTDLAAEVAAVDGVVNATPVGMAGIPGNPVPADALHKGQWAADVIYTPIETAFIKAAAAKGCRVLTGGGMCVHQAAEAFRLFTGIEPDSKRMHRVFAEALARRDGALKEA 879
            + R  LVGLIG NI KSLSPAL  DA A +G+ G YHLMD+D+LPGR LP LL AA TAGFAG NVTFP K+ VL LLD V PEAR+IGAVNTV    DGR+TG+NTDR GFR S EE +G A   G+TAV VGAGGAGRAVAFAL DLG+ RL++ DR+ +Q + L A +    G  R ++ +D AA +A   G+VNATPVGM+G PG PVP +A  +  W ADVIYTP+ET  + AA A+G   + G GMCVHQAAE+FR FTG   D  R+ + FA A ARR+ AL  A
Sbjct:    1 MRRAVLVGLIGANIQKSLSPALFEDACAVSGLAGHYHLMDLDRLPGRGLPDLLAAACTAGFAGVNVTFPCKEAVLPLLDEVSPEAREIGAVNTVTIGSDGRTTGHNTDRSGFRCSAEETIGAARIRGETAVLVGAGGAGRAVAFALFDLGLRRLLVADRDRSQAEGLTAAV----GRQRCEIVSDAAAALAGAAGMVNATPVGMSGFPGLPVPPEAFSRRHWLADVIYTPLETELVLAARARGAEAVGGAGMCVHQAAESFRHFTGRTADIDRLKKTFAAAAARRETALAAA 288          
BLAST of mRNA_P-wetherbeei_contig16510.1.1 vs. uniprot
Match: A0A1H8WMJ9_9PROT (Shikimate dehydrogenase (NADP(+)) n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1H8WMJ9_9PROT)

HSP 1 Score: 307 bits (787), Expect = 2.230e-101
Identity = 168/283 (59.36%), Postives = 196/283 (69.26%), Query Frame = 1
Query:   19 LVGLIGGNIMKSLSPALHHDAFAAAGIDGFYHLMDVDKLPGRKLPQLLEAARTAGFAGTNVTFPFKQDVLALLDAVDPEARQIGAVNTVVFAPDGRSTGYNTDRRGFRRSFEEGLGRAAADGKTAVQVGAGGAGRAVAFALMDLGVARLILHDREPAQVKALLADLAAHFGAARSQLSTDLAAEVAAVDGVVNATPVGMAGIPGNPVPADALHKGQWAADVIYTPIETAFIKAAAAKGCRVLTGGGMCVHQAAEAFRLFTGIEPDSKRMHRVFAEALARRDGA 867
            LVGLIG NI KSL+PALH DAFAAAG  G YHLMDV  L GR+L  LL A RTAGFAG N+T PFK+ V+ LLDAV  EA +IGAVNTVVF   GR+TG+NTD  GFR++F E  G  A  GK  + +GAGGAGRAVA ALM LG + + ++DR+ A+   L ADL   FG  R +L TD    V  V G+VNATPVGM G PG P+P   + K  + ADVIYTPI+T F+ AA  KGCR + GGGMCVHQA +AFR FTG+ PD  RM R F  A A RD A
Sbjct:    6 LVGLIGTNIQKSLAPALHEDAFAAAGASGHYHLMDVSLLQGRRLEDLLAAVRTAGFAGVNITHPFKEAVIPLLDAVSTEATEIGAVNTVVFDKSGRTTGHNTDCSGFRQAFIETFGADAVRGKPVLLLGAGGAGRAVAVALMALGASTVKIYDRDQARATGLCADLIMRFGGDRCELLTDPETAVEQVAGIVNATPVGMTGYPGLPLPVRLIQKHHFVADVIYTPIDTKFVLAAQKKGCRTMNGGGMCVHQAVDAFRHFTGLVPDVARMKRTFETACAARDAA 288          
BLAST of mRNA_P-wetherbeei_contig16510.1.1 vs. uniprot
Match: D5RHZ5_9PROT (Shikimate dehydrogenase (NADP(+)) n=1 Tax=Roseomonas cervicalis ATCC 49957 TaxID=525371 RepID=D5RHZ5_9PROT)

HSP 1 Score: 255 bits (651), Expect = 9.830e-81
Identity = 149/280 (53.21%), Postives = 180/280 (64.29%), Query Frame = 1
Query:   19 LVGLIGGNIMKSLSPALHHDAFAAAGIDGFYHLMDVDKLPG--RKLPQLLEAARTAGFAGTNVTFPFKQDVLALLDAVDPEARQIGAVNTVVFAPDGRSTGYNTDRRGFRRSFEEGLGRAAADGKTAVQVGAGGAGRAVAFALMDLGVARLILHDREPAQVKALLADLAAHFGAARSQLSTDLAAEVAAVDGVVNATPVGMAGIPGNPVPADALHKGQWAADVIYTPIETAFIKAAAAKGCRVLTGGGMCVHQAAEAFRLFTGIEPDSKRMHRVFAEALA 852
            LVGLIG  I  S SPALH    AA G    Y L D+D L G    LP+LLE A   GFAG N+T P KQ VL LL  V  +AR +GAVNTVV    GR  G+NTD  GF   F  GL  AA      VQ+GAGGAG AVA A + LG  RL L DR+  + +AL A L AHFGA R++ +TD+AA +   DG+++ATP GMA  PG P+P + LH G W A+V+Y P+ETA ++AA A+GCRV+ GGGM V QA  AFRLFTG EPD++RM R F   +A
Sbjct:   20 LVGLIGSGIQASRSPALHEAEGAAQGFRYLYRLFDLDVLGGGVESLPRLLELAEALGFAGLNITHPCKQAVLPLLHEVSADARALGAVNTVVLRG-GRRIGHNTDHSGFAEGFRRGLPDAAMG--EVVQLGAGGAGAAVAHAALTLGTGRLTLLDRDADRAEALAAQLNAHFGAGRARAATDIAAAMRGADGLIHATPTGMAKYPGLPLPEELLHPGLWVAEVVYVPLETALLRAARARGCRVVDGGGMAVFQAVGAFRLFTGAEPDAERMLRHFQRMMA 296          
BLAST of mRNA_P-wetherbeei_contig16510.1.1 vs. uniprot
Match: A0A1Y6BB35_9HYPH (Shikimate dehydrogenase (NADP(+)) n=1 Tax=Tistlia consotensis USBA 355 TaxID=560819 RepID=A0A1Y6BB35_9HYPH)

HSP 1 Score: 253 bits (647), Expect = 2.530e-80
Identity = 150/281 (53.38%), Postives = 183/281 (65.12%), Query Frame = 1
Query:    7 NRQALVGLIGGNIMKSLSPALHHDAFAAAGIDGFYHLMDVDKLPGRK--LPQLLEAARTAGFAGTNVTFPFKQDVLALLDAVDPEARQIGAVNTVVFAPDGRSTGYNTDRRGFRRSFEEGLGRAAADGKTAVQVGAGGAGRAVAFALMDLGVARLILHDREPAQVKALLADLAAHFGAARSQLSTDLAAEVAAVDGVVNATPVGMAGIPGNPVPADALHKGQWAADVIYTPIETAFIKAAAAKGCRVLTGGGMCVHQAAEAFRLFTGIEPDSKRMHRVFAE 843
            NR  LVGLIG  I  S SPALH    A+ G+   Y L+D+ +L G    LP+LLEA    GF GTNVT P K  V+ LLD + P A  IGAVNTVVFA +GR +G+NTD  GF  SF  GL    A+ +  VQ+GAGGAG AVA A +DLGV RL++HDRE A+  AL+  L+A  G A  +   DL + +AA DG+++ATP GMAG  G  +  D LH GQW ADV+Y P+ET  +KAA  +GCR L GGGM V QA  AF LFTGI PD++RM   FAE
Sbjct:    7 NRSYLVGLIGSGIGGSRSPALHESEAASQGLRYLYKLVDLQRLGGDAAILPRLLEAMELTGFTGTNVTHPCKHAVVPLLDQLSPAAAAIGAVNTVVFA-EGRRSGHNTDCWGFAESFRRGL--PDAEREVVVQLGAGGAGAAVAVAALDLGVRRLLIHDREAARADALVERLSARPGDATVERVDDLRSALAAADGLIHATPTGMAGHGGIALDPDLLHAGQWVADVVYVPLETELLKAARQRGCRTLDGGGMAVFQAVRAFELFTGIRPDAERMLHRFAE 284          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16510.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7C2M1M3_9HYPH2.680e-12264.51Shikimate dehydrogenase (NADP(+)) n=1 Tax=Hyphomic... [more]
A0A363TED2_9BRAD1.500e-12065.17Shikimate dehydrogenase (NADP(+)) n=1 Tax=Bradyrhi... [more]
A0A8J7N5X2_9PROT1.410e-11362.07Shikimate dehydrogenase (NADP(+)) n=1 Tax=Candidat... [more]
A0A5C8PBG9_9HYPH2.230e-11261.75Shikimate dehydrogenase (NADP(+)) n=2 Tax=Vineibac... [more]
A0A537S440_9PROT7.770e-10659.86Shikimate dehydrogenase (NADP(+)) n=1 Tax=Alphapro... [more]
A0A5C5TI17_9HYPH2.450e-10558.62Shikimate dehydrogenase (NADP(+)) n=1 Tax=Reyranel... [more]
A0A521L1K9_9HYPH1.940e-10359.25Shikimate dehydrogenase n=1 Tax=Reyranella sp. Tax... [more]
A0A1H8WMJ9_9PROT2.230e-10159.36Shikimate dehydrogenase (NADP(+)) n=3 Tax=Alphapro... [more]
D5RHZ5_9PROT9.830e-8153.21Shikimate dehydrogenase (NADP(+)) n=1 Tax=Roseomon... [more]
A0A1Y6BB35_9HYPH2.530e-8053.38Shikimate dehydrogenase (NADP(+)) n=1 Tax=Tistlia ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16510contigP-wetherbeei_contig16510:130..1014 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1112217.PPL19_13895
Preferred namearoE2
PFAMsSacchrp_dh_NADP,Shikimate_DH,Shikimate_dh_N
Model size885
Max annot lvl1236|Gammaproteobacteria
KEGG rclassRC00206
KEGG koko:K00014
KEGG ReactionR02413
KEGG Pathwayko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230
KEGG ModuleM00022
Hectar predicted targeting categoryother localisation
Exons1
Evalue6.84e-77
EggNOG OGsCOG0169@1|root,COG0169@2|Bacteria,1Q95E@1224|Proteobacteria,1S38H@1236|Gammaproteobacteria
EC1.1.1.25
DescriptionInvolved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
Cds size885
COG categoryE
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186089.1418736-CDS-P-wetherbeei_contig16510:129..10141683186089.1418736-CDS-P-wetherbeei_contig16510:129..1014Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16510 130..1014 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16510.1.1prot_P-wetherbeei_contig16510.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig16510 130..1014 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig16510.1.1

>prot_P-wetherbeei_contig16510.1.1 ID=prot_P-wetherbeei_contig16510.1.1|Name=mRNA_P-wetherbeei_contig16510.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=295bp
MINRQALVGLIGGNIMKSLSPALHHDAFAAAGIDGFYHLMDVDKLPGRKL
PQLLEAARTAGFAGTNVTFPFKQDVLALLDAVDPEARQIGAVNTVVFAPD
GRSTGYNTDRRGFRRSFEEGLGRAAADGKTAVQVGAGGAGRAVAFALMDL
GVARLILHDREPAQVKALLADLAAHFGAARSQLSTDLAAEVAAVDGVVNA
TPVGMAGIPGNPVPADALHKGQWAADVIYTPIETAFIKAAAAKGCRVLTG
GGMCVHQAAEAFRLFTGIEPDSKRMHRVFAEALARRDGALKEAV*
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mRNA from alignment at P-wetherbeei_contig16510:130..1014+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig16510.1.1 ID=mRNA_P-wetherbeei_contig16510.1.1|Name=mRNA_P-wetherbeei_contig16510.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=885bp|location=Sequence derived from alignment at P-wetherbeei_contig16510:130..1014+ (Phaeothamnion wetherbeei SAG_119_79)
ATGATCAACCGCCAGGCGCTGGTCGGACTGATCGGCGGCAACATCATGAA ATCGCTGTCGCCGGCCCTGCATCACGATGCTTTCGCCGCCGCCGGCATCG ACGGCTTTTATCATCTGATGGATGTCGACAAACTGCCGGGACGCAAGCTG CCGCAACTGCTCGAGGCGGCGCGCACGGCAGGCTTTGCCGGCACCAACGT CACCTTTCCGTTCAAGCAGGACGTGCTGGCGCTGCTCGACGCCGTCGATC CGGAAGCGCGCCAGATCGGCGCGGTCAACACGGTCGTGTTCGCGCCCGAC GGCCGCTCGACCGGCTACAATACCGACCGGCGCGGCTTTCGCCGCAGCTT CGAGGAGGGCCTCGGCCGCGCCGCCGCCGACGGCAAGACCGCAGTGCAGG TGGGCGCCGGCGGCGCCGGCCGCGCGGTCGCCTTCGCCTTGATGGATCTC GGCGTCGCCCGGCTCATTCTGCATGACCGCGAGCCGGCGCAGGTGAAAGC CCTGCTGGCCGATCTTGCCGCGCATTTTGGCGCGGCGCGCAGCCAGCTTT CGACCGATCTCGCCGCCGAAGTCGCCGCCGTCGATGGCGTGGTCAACGCC ACGCCCGTCGGCATGGCCGGCATTCCGGGAAACCCGGTGCCAGCCGACGC GTTGCACAAGGGCCAATGGGCGGCCGACGTCATCTATACGCCGATCGAAA CCGCGTTCATCAAGGCCGCCGCGGCCAAAGGCTGCCGCGTGCTGACTGGC GGCGGCATGTGCGTGCATCAGGCGGCGGAGGCTTTCCGCCTGTTCACCGG CATCGAGCCGGACAGCAAGCGCATGCACCGCGTTTTCGCCGAGGCGCTGG CGCGGCGCGACGGGGCGTTGAAGGAAGCCGTCTAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig16510:130..1014+

>mRNA_P-wetherbeei_contig16510.1.1 ID=mRNA_P-wetherbeei_contig16510.1.1|Name=mRNA_P-wetherbeei_contig16510.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=885bp|location=Sequence derived from alignment at P-wetherbeei_contig16510:130..1014+ (Phaeothamnion wetherbeei SAG_119_79)
ATGATCAACCGCCAGGCGCTGGTCGGACTGATCGGCGGCAACATCATGAA
ATCGCTGTCGCCGGCCCTGCATCACGATGCTTTCGCCGCCGCCGGCATCG
ACGGCTTTTATCATCTGATGGATGTCGACAAACTGCCGGGACGCAAGCTG
CCGCAACTGCTCGAGGCGGCGCGCACGGCAGGCTTTGCCGGCACCAACGT
CACCTTTCCGTTCAAGCAGGACGTGCTGGCGCTGCTCGACGCCGTCGATC
CGGAAGCGCGCCAGATCGGCGCGGTCAACACGGTCGTGTTCGCGCCCGAC
GGCCGCTCGACCGGCTACAATACCGACCGGCGCGGCTTTCGCCGCAGCTT
CGAGGAGGGCCTCGGCCGCGCCGCCGCCGACGGCAAGACCGCAGTGCAGG
TGGGCGCCGGCGGCGCCGGCCGCGCGGTCGCCTTCGCCTTGATGGATCTC
GGCGTCGCCCGGCTCATTCTGCATGACCGCGAGCCGGCGCAGGTGAAAGC
CCTGCTGGCCGATCTTGCCGCGCATTTTGGCGCGGCGCGCAGCCAGCTTT
CGACCGATCTCGCCGCCGAAGTCGCCGCCGTCGATGGCGTGGTCAACGCC
ACGCCCGTCGGCATGGCCGGCATTCCGGGAAACCCGGTGCCAGCCGACGC
GTTGCACAAGGGCCAATGGGCGGCCGACGTCATCTATACGCCGATCGAAA
CCGCGTTCATCAAGGCCGCCGCGGCCAAAGGCTGCCGCGTGCTGACTGGC
GGCGGCATGTGCGTGCATCAGGCGGCGGAGGCTTTCCGCCTGTTCACCGG
CATCGAGCCGGACAGCAAGCGCATGCACCGCGTTTTCGCCGAGGCGCTGG
CGCGGCGCGACGGGGCGTTGAAGGAAGCCGTCTAG
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