mRNA_P-wetherbeei_contig16493.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig16493.1.1
Unique NamemRNA_P-wetherbeei_contig16493.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig16493.1.1 vs. uniprot
Match: D8LBR3_ECTSI (Sas10 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBR3_ECTSI)

HSP 1 Score: 167 bits (424), Expect = 6.290e-43
Identity = 127/294 (43.20%), Postives = 162/294 (55.10%), Query Frame = 1
Query:   82 LPEHLRRAAMHAAESSDDSXXXXXXXXXXXXXXXXSWGRSKRAYYDADTADIGDDAXXXXELDNAADEEAAALELQRAALAELNEADF--------------------EVGGGGSAETDATXXXXXXXXXXXXXXXXXXXAGRD-----------VVEVAAVARDPSKLSRRDKLRVVISESPELLPLLAELRTHAAQLAATVGPLADAVTGDLGASADGLAYLRCRRQLLLSLCMNGCLYLSLKARGQRVRDHPVMARLLRLRELAEKLGPVDAALRPQLELLSRALAEGIDL 870
            LPEH+RRAAM A+ S D  XXXXXXXXXXX      WG+++ +YY+ADTAD+        E ++A  EE AALELQRA+   L+ AD+                    E GG G   T A                    A +             VE + V RD SKLSRRDKL +V+SE+PEL  LL E+R     L  +V PL   VT ++GAS DGL YLR R+QLLL+ CMN C Y+ LKA+G+  + HPV+ RLL LR L E +  +D  +  Q++LL RAL  G+DL
Sbjct:  114 LPEHVRRAAMQAS-SDDXXXXXXXXXXXXXKFGAGGWGKNRSSYYNADTADL----EIGQEFEDAEAEEEAALELQRASYKRLDPADYGEEEXXXXXXXXXXXXXXKQERGGKGKGNTAAKRRERDGTSSAAGAQGEALRAMKSDLEQIALGAGGEVETSVVKRDTSKLSRRDKLELVLSEAPELPALLGEVRAQLGTLTESVQPLVSNVTAEIGASKDGLVYLRTRQQLLLAYCMNVCFYMVLKAKGEPAKGHPVVRRLLSLRGLLEDMSSLDDKMSSQVDLLLRALRSGVDL 402          
BLAST of mRNA_P-wetherbeei_contig16493.1.1 vs. uniprot
Match: A0A6H5KFL1_9PHAE (Sas10 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFL1_9PHAE)

HSP 1 Score: 139 bits (349), Expect = 5.870e-33
Identity = 97/260 (37.31%), Postives = 130/260 (50.00%), Query Frame = 1
Query:  199 SKRAYYDADTADIGDDAXXXXELDNAADEEAAALELQRAALAELNEADF------------------------------------EVGGGGSAETDATXXXXXXXXXXXXXXXXXXXAGRDVVEVAAVARDPSKLSRRDKLRVVISESPELLPLLAELRTHAAQLAATVGPLADAVTGDLGASADGLAYLRCRRQLLLSLCMNGCLYLSLKARGQRVRDHPVMARLLRLRELAEKLGPVDAALRPQLELLSRALAEGIDL 870
            ++ +YY+ADTAD+        E ++A  EE AALELQRA+   L+ AD+                                         G++                         G   VE + V RD SKLSRRDKL +V+SE+PEL  LL E+R     L  +V PL   VT ++GAS DGL YLR R+QLLL+ CMN C Y+ LKA+G+  + HPV+ RLL LR L E +  +D  +  Q++LL RAL  G+DL
Sbjct:   45 TRSSYYNADTADL----EIGQEFEDAEAEEEAALELQRASYKRLDPADYGEEEXXXXXXXXXXXTAKQEXXXXXXXXXXXXTTAKRXXXXGTSSAAGAQGEALRAMKSDLEQIALGAGGE--VETSVVKRDTSKLSRRDKLELVLSEAPELPALLGEVRAQLGTLTESVQPLVSNVTAEIGASKDGLVYLRTRQQLLLAYCMNVCFYMVLKAKGEPAKGHPVVRRLLSLRGLLEDMSSLDDKMSSQVDLLLRALRSGVDL 298          
BLAST of mRNA_P-wetherbeei_contig16493.1.1 vs. uniprot
Match: A0A8J4AXP0_9CHLO (Sas10 domain-containing protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4AXP0_9CHLO)

HSP 1 Score: 119 bits (297), Expect = 6.070e-26
Identity = 99/226 (43.81%), Postives = 127/226 (56.19%), Query Frame = 1
Query:  190 WGRSKRAYYDADTADIGDDAXXXXELDNAADEEAAALELQRAALAELNEADFEVGGGGSAETDATXXXXXXXXXXXXXXXXXXXA-----GRDVVEVAAVARDPSKLSRRDKLRVVISESPELLPLLAELRTHAAQLAATVGPLADAVT-GDLGASADGLAYLRCRRQLLLSLCMNGCLYLSLKARGQRVRDHPVMARLLRLRELAEKLGPVDAALRPQLELLSRA 849
            WG SKRAYY+ADTA+   D     E      EE  AL LQRA  A+L  ADF        E D  XXXXXXXXX          A     GR  VEV AVARD S L    +L  +++++PELL LL +L+   A++   V PL   +  G LG + +GL+YL  +  LLLS C++   YL LKA G+ VRDHPV+ RL+ LR   EK+ P+D  L  Q++ L +A
Sbjct:  144 WGASKRAYYNADTAEAASDDELLKE------EEQEALALQRARAAKLAAADF------GLEEDXXXXXXXXXXXVETMGGLASRAMAGGRGRGKVEVEAVARDLSALGDEARLSALMADAPELLSLLQDLQESLAEVRHRVSPLLTELREGGLGTT-EGLSYLEAKHLLLLSYCIHIVFYLLLKAEGRPVRDHPVIGRLVELRAYLEKIRPIDKQLSYQIDKLLKA 356          
BLAST of mRNA_P-wetherbeei_contig16493.1.1 vs. uniprot
Match: D8U8A8_VOLCA (Sas10 domain-containing protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8U8A8_VOLCA)

HSP 1 Score: 116 bits (291), Expect = 3.790e-25
Identity = 89/232 (38.36%), Postives = 119/232 (51.29%), Query Frame = 1
Query:  190 WGRSKRAYYDADTADIGDDAXXXXELDNAADEEAAALELQRAALAELNEADF-----------EVGGGGSAETDATXXXXXXXXXXXXXXXXXXXAGRDVVEVAAVARDPSKLSRRDKLRVVISESPELLPLLAELRTHAAQLAATVGP-LADAVTGDLGASADGLAYLRCRRQLLLSLCMNGCLYLSLKARGQRVRDHPVMARLLRLRELAEKLGPVDAALRPQLELLSRA 849
            WG SKRAYYDADTA+ G D     E      EE  AL LQRA  A+L  ADF           E   G   E                         +  VEV AVARD S L    ++  +++++PELL LL +L+   A++   V P L +   G LG + +GL+YL  +  LLLS C++   YL +KA G+ VRDHPV+ARL+ LR   EK+ P+D  L  Q++ L +A
Sbjct:  149 WGASKRAYYDADTAEAGSDEEALKE------EEQEALALQRARAAKLAAADFGLEDQDEDHMEETDEGEEDEGPTMGGLAAARAAAVEGGKMGSGKRQGQVEVEAVARDLSALGHDARMSALMADAPELLSLLQDLQESLAEVRHRVMPVLTELREGGLGTT-EGLSYLEAKYLLLLSYCIHIVFYLLMKAEGRPVRDHPVIARLVELRAYLEKIRPIDKQLSYQIDKLLKA 373          
BLAST of mRNA_P-wetherbeei_contig16493.1.1 vs. uniprot
Match: A0A7S3UFC2_9CHLO (Hypothetical protein n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A7S3UFC2_9CHLO)

HSP 1 Score: 107 bits (267), Expect = 4.780e-22
Identity = 75/235 (31.91%), Postives = 117/235 (49.79%), Query Frame = 1
Query:  190 WGRSKRAYYDADTADIGDDAXXXXELDNAADEEAAALELQRAALAELNEADFEVGGGGSAETDATXXXXXXXXXXXXXXXXXXXAGRDVVEVAAVARDPSKLSRRDKLRVVISESPELLPLLAELRTHAAQLAATVGPLADAVTGDLGASADGLAYLRCRRQLLLSLCMNGCLYLSLKARGQRVRDHPVMARLLRLRELAEKLGPVDAALRPQLELLSRALAEGIDLRPEGAEGA 894
            WG+ K  YY AD  DI  +     E       EA  ++ +RAAL  L   DFE   G S+E D                      G   +E   + +D S ++  +KL +V+S++PEL+ LL +LR    Q+   + P+ + V     A+ +G++YL  +  L+LS C N   YL LK+ G+ VRDHPVM RL+++R   EK+ P+D  ++ Q++ L +  +  +    E  E A
Sbjct:  124 WGKGKGLYYGADNQDI--ELTDDEEAPQXXXXEALRIQRERAAL--LRPEDFEAEEGSSSEEDEPLTLGQKVAANSRRKQGKQTNGH--IEQETIVKDKSGMTEDEKLSIVMSDAPELVGLLGDLRKGLEQVRERIQPVIEKVKVGALATREGMSYLEAKNLLMLSYCTNIVFYLLLKSEGKSVRDHPVMQRLVQIRAYLEKIRPIDKKMQYQIDKLLKLSSTDLSKAEEQKEKA 352          
BLAST of mRNA_P-wetherbeei_contig16493.1.1 vs. uniprot
Match: A0A1Y1INM2_KLENI (Sas10/Utp3/C1D family protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1INM2_KLENI)

HSP 1 Score: 103 bits (257), Expect = 1.010e-20
Identity = 78/231 (33.77%), Postives = 112/231 (48.48%), Query Frame = 1
Query:  190 WGRSKRAYYDADTADIGDDAXXXXELDNAADEEAAA------LELQRAALAELNEADFEVGGGGSAETDATXXXXXXXXXXXXXXXXXXXAG--RDVVEVAAVARDPSKLSRRDKLRVVISESPELLPLLAELRTHAAQLAATVGPLADAVTGDLGASADGLAYLRCRRQLLLSLCMNGCLYLSLKARGQRVRDHPVMARLLRLRELAEKLGPVDAALRPQLELLSRALAE 858
            WG+SK+ YY  D  D+        EL +  DEEA A      LE QR     L   D++      ++ +                      G   + V V  V +D   L+R +KL  V+SE+PEL+ LL ELR    ++   V P+  AV     A+ DG++YL  +  LLL+ C N   YL LKA G+ V+DHPV+ R++ LR   EK+ P+D  L+ Q++ L  A  E
Sbjct:  165 WGKSKKVYYGGDNVDL--------ELTD--DEEAPAEXXXMVLEQQRKLAQSLRPEDYDQESEDESDKETPDAGEETLEAAANRAENGVKKGVKENGVTVEEVKKDLDSLTREEKLAAVMSEAPELVSLLGELREGLREITEKVQPVLRAVKDGKYATQDGISYLEAKHLLLLTYCQNIVFYLLLKAEGRPVQDHPVITRMVELRLFLEKIRPIDKKLQYQIDKLLAAAKE 385          
BLAST of mRNA_P-wetherbeei_contig16493.1.1 vs. uniprot
Match: A0A2I0K5G3_PUNGR (Sas10 domain-containing protein n=4 Tax=Punica granatum TaxID=22663 RepID=A0A2I0K5G3_PUNGR)

HSP 1 Score: 101 bits (252), Expect = 4.020e-20
Identity = 75/218 (34.40%), Postives = 105/218 (48.17%), Query Frame = 1
Query:  190 WGRSKRAYYDADTADIGDDAXXXXELDNAADEEAAALELQRAALAELNEADFEVGGGGSAETDATXXXXXXXXXXXXXXXXXXXAGRD---VVEVAAVARDPSKLSRRDKLRVVISESPELLPLLAELRTHAAQLAATVGPLADAVTGDLGASADGLAYLRCRRQLLLSLCMNGCLYLSLKARGQRVRDHPVMARLLRLRELAEKLGPVDAALRPQLE 834
            WGRSKR YY+AD A   D+           +EEA  L +QR     L+  DF +      E+D                        +   V +   V +D + LS+ +++ VV S +PEL+ LL EL T   +L   V PL   V     AS +G+ YL  ++ LLLS C     YL LK+ GQ VRDHPV+ RL+ ++ L +K+  +D  L  QLE
Sbjct:  125 WGRSKRQYYNADEATSSDEELLV-------EEEAEVLRMQREKAKSLSMEDFGLEDISEEESDKEPTLGEIAIRGQDKIDSDIKKDMEDNGVTDFEEVKKDLNALSKEEQMDVVYSSAPELVGLLLELYTAVEELEERVNPLISTVKDGGNASKEGVRYLEVKQILLLSYCQAITFYLLLKSEGQPVRDHPVIGRLVEIKNLLDKMKELDENLPSQLE 335          
BLAST of mRNA_P-wetherbeei_contig16493.1.1 vs. uniprot
Match: A0A0D6R543_ARACU (Sas10 domain-containing protein n=1 Tax=Araucaria cunninghamii TaxID=56994 RepID=A0A0D6R543_ARACU)

HSP 1 Score: 101 bits (252), Expect = 4.370e-20
Identity = 73/232 (31.47%), Postives = 113/232 (48.71%), Query Frame = 1
Query:  190 WGRSKRAYYDADTADIGDDAXXXXELDNAADEEAAALELQRAALAELNEADFEVGGGGSAETDATXXXXXXXXXXXXXXXXXXXAGRD-----------------VVEVAAVARDPSKLSRRDKLRVVISESPELLPLLAELRTHAAQLAATVGPLADAVTGDLGASADGLAYLRCRRQLLLSLCMNGCLYLSLKARGQRVRDHPVMARLLRLRELAEKLGPVDAALRPQLE 834
            WG+ KRAYYDAD  D         + ++ A+EEAAAL LQR     L   DF +      E DA                     G+                  +V    V +D + LS+  ++ +V+S++PEL+ LL+E +    QL   V  +   V  +  A+ +G++YL+ ++ +LL  C +   YL LKA G+ +RDHPV+ARL+ +R   +K+ P+D  L+ Q E
Sbjct:  132 WGKGKRAYYDADNVDF---ELQSSDEESPAEEEAAALTLQRKKAELLRPEDFGLEEDEECENDADSDAYEETLQEAVKRHEGGLEGKKPKKASNRDLGTQVDDDKIVAFEEVKKDINALSKEQQMEIVMSDAPELVGLLSEFKDGFVQLR-NVETVLRNVKANKNATNEGISYLQVKQLVLLCYCQSIVFYLLLKAEGRSIRDHPVIARLVEIRNFLDKIQPIDNELKNQFE 359          
BLAST of mRNA_P-wetherbeei_contig16493.1.1 vs. uniprot
Match: A0A8J6CFT6_DIALT (Sas10 domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CFT6_DIALT)

HSP 1 Score: 99.4 bits (246), Expect = 2.750e-19
Identity = 66/137 (48.18%), Postives = 89/137 (64.96%), Query Frame = 1
Query:  493 LSRRDKLRVVISESPELLPLLAELRTHAAQLAATVGPL-ADAVTGDLGASADGLAYLRCRRQLLLSLCMNGCLYLSLKARGQRVRDHPVMARLLRLRELAEKLGPVDAALRPQLE-LLSRALAEGIDLRPEGAEGAA 897
            LS R++L VV  ++PELL LLA+L++   +  + V PL A A  G+L     GL YL+ + QLLLS C N   +L+LKA G  VRDHPV+A+L+RLR + EKLGP+D  LR Q++ LL  A A+G      GA G+A
Sbjct:  265 LSSRERLEVVSRDAPELLMLLADLKSKLDETRSRVAPLVAAAGAGELRVG-GGLGYLQTKLQLLLSYCTNVAFFLALKASGAAVRDHPVIAQLVRLRAVFEKLGPLDKKLRFQVDRLLQLASADGGADGARGATGSA 400          
BLAST of mRNA_P-wetherbeei_contig16493.1.1 vs. uniprot
Match: A0A293MXF1_ORNER (Sas10 domain-containing protein (Fragment) n=1 Tax=Ornithodoros erraticus TaxID=265619 RepID=A0A293MXF1_ORNER)

HSP 1 Score: 98.2 bits (243), Expect = 4.120e-19
Identity = 77/237 (32.49%), Postives = 116/237 (48.95%), Query Frame = 1
Query:  187 SWGRSKRAYYDADTAD-----IGDDAXXXXELDNAADEEAAALELQRAALAELNEADF--EVGGGGSAETDATXXXXXXXXXXXXXXXXXXXAGRDVVEVAAVARDPSKLSRRDKLRVVISESPELLPLLAELRTHAAQLAATVGPLADAVTGDLGASADGLAYLRCRRQLLLSLCMNGCLYLSLKARGQRVRDHPVMARLLRLRELAEKLGPVDAALRPQLELLSRALAEGIDLRP 876
            +WG+ K  YY  D  D     I D+A    EL     EE  A  LQ+    +L++ADF  ++      ETD T                             +A+D SKLSR +KL+++  ESPELL L+ + ++   +L  T+ PL + V  D   S   + YL  +RQL+L  C N   YL LKA+   V +HPV+ RL+  R+L ++L PVD  L  ++  +   +++G D+ P
Sbjct:  100 AWGKKKSTYYHTDFVDEDYEGIADNAAELAEL-----EEKEAKALQKRLAEQLSDADFGLDLFQVHREETDGT--------------------------TQKIAKDLSKLSRDEKLKLLSKESPELLDLVEDFKSKMIELKDTILPLLELVKQDKITSELAVQYLNLKRQLILQYCTNITFYLVLKAKRAPVANHPVIRRLVSFRKLLKELEPVDQKLSDEIRTVLEMISKGQDVVP 305          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16493.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBR3_ECTSI6.290e-4343.20Sas10 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KFL1_9PHAE5.870e-3337.31Sas10 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A8J4AXP0_9CHLO6.070e-2643.81Sas10 domain-containing protein n=1 Tax=Volvox afr... [more]
D8U8A8_VOLCA3.790e-2538.36Sas10 domain-containing protein n=1 Tax=Volvox car... [more]
A0A7S3UFC2_9CHLO4.780e-2231.91Hypothetical protein n=1 Tax=Picocystis salinarum ... [more]
A0A1Y1INM2_KLENI1.010e-2033.77Sas10/Utp3/C1D family protein n=1 Tax=Klebsormidiu... [more]
A0A2I0K5G3_PUNGR4.020e-2034.40Sas10 domain-containing protein n=4 Tax=Punica gra... [more]
A0A0D6R543_ARACU4.370e-2031.47Sas10 domain-containing protein n=1 Tax=Araucaria ... [more]
A0A8J6CFT6_DIALT2.750e-1948.18Sas10 domain-containing protein n=1 Tax=Diacronema... [more]
A0A293MXF1_ORNER4.120e-1932.49Sas10 domain-containing protein (Fragment) n=1 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16493contigP-wetherbeei_contig16493:20..1012 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LBR3
Preferred nameUTP3
PFAMsSas10,Sas10_Utp3
Model size993
Max annot lvl2759|Eukaryota
KEGG koko:K14765,ko:K14767
Hectar predicted targeting categoryother localisation
GOsGO:0000447,GO:0000460,GO:0000462,GO:0000466,GO:0000469,GO:0000472,GO:0000478,GO:0000479,GO:0000480,GO:0000966,GO:0000967,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0007275,GO:0007399,GO:0007417,GO:0007420,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0030490,GO:0030515,GO:0030684,GO:0031974,GO:0031981,GO:0032040,GO:0032501,GO:0032502,GO:0032991,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0042254,GO:0042274,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0048513,GO:0048731,GO:0048856,GO:0060322,GO:0070013,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:1901360,GO:1901363,GO:1990904
Exons1
Evalue1.03e-43
EggNOG OGsKOG3118@1|root,KOG3118@2759|Eukaryota
Ec32 ortholog descriptionSas10 C-terminal domain
Ec32 orthologEc-27_003010.1
Descriptionmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Cds size993
COG categoryS
BRITEko00000,ko03009
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186088.5625129-CDS-P-wetherbeei_contig16493:19..10121683186088.5625129-CDS-P-wetherbeei_contig16493:19..1012Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16493 20..1012 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16493.1.1prot_P-wetherbeei_contig16493.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig16493 20..1012 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig16493.1.1

>prot_P-wetherbeei_contig16493.1.1 ID=prot_P-wetherbeei_contig16493.1.1|Name=mRNA_P-wetherbeei_contig16493.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=331bp
GGGGARGGGNGEDESDDNDSDEDFMDRLPEHLRRAAMHAAESSDDSDADG
NGSSSAAAAAAASWGRSKRAYYDADTADIGDDADAGDELDNAADEEAAAL
ELQRAALAELNEADFEVGGGGSAETDATAAAAADATGAAAAGGWAAAAGR
DVVEVAAVARDPSKLSRRDKLRVVISESPELLPLLAELRTHAAQLAATVG
PLADAVTGDLGASADGLAYLRCRRQLLLSLCMNGCLYLSLKARGQRVRDH
PVMARLLRLRELAEKLGPVDAALRPQLELLSRALAEGIDLRPEGAEGAAV
DDDDSDDGGGGPAAANGRGSGNGAEREDDEE
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mRNA from alignment at P-wetherbeei_contig16493:20..1012+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig16493.1.1 ID=mRNA_P-wetherbeei_contig16493.1.1|Name=mRNA_P-wetherbeei_contig16493.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=993bp|location=Sequence derived from alignment at P-wetherbeei_contig16493:20..1012+ (Phaeothamnion wetherbeei SAG_119_79)
GGTGGAGGCGGAGCACGAGGCGGCGGGAATGGGGAGGACGAAAGCGACGA CAACGACAGCGATGAGGACTTTATGGATCGCTTGCCTGAGCACCTCCGCA GGGCTGCCATGCATGCGGCGGAATCGAGCGACGACTCGGATGCCGACGGC AACGGCTCTTCCTCCGCTGCCGCCGCCGCCGCCGCCAGCTGGGGCCGCAG CAAGCGCGCCTACTACGACGCCGACACCGCCGACATCGGCGACGACGCTG ATGCCGGCGACGAGCTCGACAACGCCGCTGACGAGGAGGCGGCGGCGCTC GAGCTGCAGCGCGCGGCGCTCGCGGAGCTCAACGAGGCCGACTTTGAAGT CGGTGGTGGTGGCAGTGCCGAAACCGATGCCACCGCTGCGGCCGCCGCCG ACGCTACCGGAGCAGCAGCAGCAGGCGGATGGGCCGCCGCTGCCGGCCGG GACGTTGTTGAGGTGGCGGCGGTAGCCCGCGACCCGTCGAAACTGAGCCG CCGCGACAAGCTGCGGGTGGTCATCTCCGAGTCGCCCGAGCTGCTGCCGC TGCTAGCGGAGCTCCGCACGCACGCCGCCCAGCTTGCGGCGACGGTGGGG CCGCTCGCCGACGCCGTGACGGGCGACCTTGGGGCGAGCGCTGACGGCCT CGCATACCTGCGGTGCCGGCGGCAGCTGCTGCTGAGCCTCTGCATGAACG GCTGCCTGTACTTGTCGCTCAAGGCCCGTGGCCAGCGCGTGCGGGACCAC CCCGTCATGGCGCGGCTGCTGCGGCTGCGGGAGCTGGCGGAGAAGCTCGG CCCCGTCGACGCTGCGCTCCGGCCGCAGCTCGAGCTTCTGTCGCGGGCGC TCGCCGAGGGCATCGATCTACGGCCGGAGGGCGCAGAAGGAGCAGCGGTG GATGACGACGACAGCGACGACGGCGGCGGCGGCCCTGCGGCTGCCAACGG CCGCGGCAGCGGCAATGGCGCCGAAAGAGAGGATGACGAGGAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig16493:20..1012+

>mRNA_P-wetherbeei_contig16493.1.1 ID=mRNA_P-wetherbeei_contig16493.1.1|Name=mRNA_P-wetherbeei_contig16493.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=993bp|location=Sequence derived from alignment at P-wetherbeei_contig16493:20..1012+ (Phaeothamnion wetherbeei SAG_119_79)
GGTGGAGGCGGAGCACGAGGCGGCGGGAATGGGGAGGACGAAAGCGACGA
CAACGACAGCGATGAGGACTTTATGGATCGCTTGCCTGAGCACCTCCGCA
GGGCTGCCATGCATGCGGCGGAATCGAGCGACGACTCGGATGCCGACGGC
AACGGCTCTTCCTCCGCTGCCGCCGCCGCCGCCGCCAGCTGGGGCCGCAG
CAAGCGCGCCTACTACGACGCCGACACCGCCGACATCGGCGACGACGCTG
ATGCCGGCGACGAGCTCGACAACGCCGCTGACGAGGAGGCGGCGGCGCTC
GAGCTGCAGCGCGCGGCGCTCGCGGAGCTCAACGAGGCCGACTTTGAAGT
CGGTGGTGGTGGCAGTGCCGAAACCGATGCCACCGCTGCGGCCGCCGCCG
ACGCTACCGGAGCAGCAGCAGCAGGCGGATGGGCCGCCGCTGCCGGCCGG
GACGTTGTTGAGGTGGCGGCGGTAGCCCGCGACCCGTCGAAACTGAGCCG
CCGCGACAAGCTGCGGGTGGTCATCTCCGAGTCGCCCGAGCTGCTGCCGC
TGCTAGCGGAGCTCCGCACGCACGCCGCCCAGCTTGCGGCGACGGTGGGG
CCGCTCGCCGACGCCGTGACGGGCGACCTTGGGGCGAGCGCTGACGGCCT
CGCATACCTGCGGTGCCGGCGGCAGCTGCTGCTGAGCCTCTGCATGAACG
GCTGCCTGTACTTGTCGCTCAAGGCCCGTGGCCAGCGCGTGCGGGACCAC
CCCGTCATGGCGCGGCTGCTGCGGCTGCGGGAGCTGGCGGAGAAGCTCGG
CCCCGTCGACGCTGCGCTCCGGCCGCAGCTCGAGCTTCTGTCGCGGGCGC
TCGCCGAGGGCATCGATCTACGGCCGGAGGGCGCAGAAGGAGCAGCGGTG
GATGACGACGACAGCGACGACGGCGGCGGCGGCCCTGCGGCTGCCAACGG
CCGCGGCAGCGGCAATGGCGCCGAAAGAGAGGATGACGAGGAG
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