mRNA_P-wetherbeei_contig16489.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig16489.1.1
Unique NamemRNA_P-wetherbeei_contig16489.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig16489.1.1 vs. uniprot
Match: A0A350UHU1_9BACT (SAM-dependent methyltransferase n=1 Tax=Bryobacterales bacterium TaxID=2026791 RepID=A0A350UHU1_9BACT)

HSP 1 Score: 64.3 bits (155), Expect = 3.220e-11
Identity = 32/57 (56.14%), Postives = 45/57 (78.95%), Query Frame = 1
Query:    1 AGVTVSDVIADVGCGDGRVLLAAAAVIGCRGIGIDVSPECIAVARESSSAAGVSHLL 171
            A VT +DV+ D+GCGDGR+++AAA   G RG+GID++PE IA A E++  AGV+HL+
Sbjct:   49 ARVTKNDVVYDLGCGDGRIVIAAAKQYGARGVGIDINPERIAEANENAKKAGVTHLV 105          
BLAST of mRNA_P-wetherbeei_contig16489.1.1 vs. uniprot
Match: A0A7X4HZP6_9BACT (Methyltransferase domain-containing protein n=2 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A7X4HZP6_9BACT)

HSP 1 Score: 63.2 bits (152), Expect = 9.590e-11
Identity = 30/57 (52.63%), Postives = 42/57 (73.68%), Query Frame = 1
Query:    1 AGVTVSDVIADVGCGDGRVLLAAAAVIGCRGIGIDVSPECIAVARESSSAAGVSHLL 171
            AGVT  DV+ D+GCGDGR+++AAA   G RG+G+D+ P+ IA A  ++  AGV HL+
Sbjct:   58 AGVTADDVVYDLGCGDGRIVIAAARDFGARGVGVDIDPQRIAEANANAEQAGVQHLV 114          
BLAST of mRNA_P-wetherbeei_contig16489.1.1 vs. uniprot
Match: A0A7C3IF32_9BACT (Methyltransferase domain-containing protein n=1 Tax=Bryobacterales bacterium TaxID=2026791 RepID=A0A7C3IF32_9BACT)

HSP 1 Score: 62.8 bits (151), Expect = 1.270e-10
Identity = 32/57 (56.14%), Postives = 45/57 (78.95%), Query Frame = 1
Query:    1 AGVTVSDVIADVGCGDGRVLLAAAAVIGCRGIGIDVSPECIAVARESSSAAGVSHLL 171
            A V  SDV+ D+GCGDGR+++AAA + G RG+GID++PE IA ARE++  AGV +L+
Sbjct:   50 ADVKASDVVYDLGCGDGRIVVAAAKLHGARGVGIDINPERIAEARENARKAGVENLV 106          
BLAST of mRNA_P-wetherbeei_contig16489.1.1 vs. uniprot
Match: A0A350UNR1_9BACT (SAM-dependent methyltransferase n=1 Tax=Bryobacterales bacterium TaxID=2026791 RepID=A0A350UNR1_9BACT)

HSP 1 Score: 62.4 bits (150), Expect = 1.780e-10
Identity = 30/52 (57.69%), Postives = 41/52 (78.85%), Query Frame = 1
Query:   16 SDVIADVGCGDGRVLLAAAAVIGCRGIGIDVSPECIAVARESSSAAGVSHLL 171
            SDV+ D+GCGDGR+++AAA   G RG+GID++PE IA AR ++  AGV HL+
Sbjct:   57 SDVVYDLGCGDGRIVIAAARKFGARGVGIDINPERIAEARANAKKAGVEHLV 108          
BLAST of mRNA_P-wetherbeei_contig16489.1.1 vs. uniprot
Match: A0A2G4JKA2_9BACT (SAM-dependent methyltransferase n=1 Tax=Acidobacterium sp. TaxID=1872119 RepID=A0A2G4JKA2_9BACT)

HSP 1 Score: 62.4 bits (150), Expect = 1.860e-10
Identity = 31/57 (54.39%), Postives = 42/57 (73.68%), Query Frame = 1
Query:    1 AGVTVSDVIADVGCGDGRVLLAAAAVIGCRGIGIDVSPECIAVARESSSAAGVSHLL 171
            AGVT +DV+ D+GCGDGR+ +AAA   G RGIG+D+ P+ IA A  ++  AGV HL+
Sbjct:   57 AGVTKADVVIDLGCGDGRIPIAAAKQYGARGIGVDIDPQRIAEANANAKVAGVEHLV 113          
BLAST of mRNA_P-wetherbeei_contig16489.1.1 vs. uniprot
Match: A0A1F2SEA3_9BACT (Methyltransf_25 domain-containing protein n=1 Tax=Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18 TaxID=1797185 RepID=A0A1F2SEA3_9BACT)

HSP 1 Score: 60.1 bits (144), Expect = 1.060e-9
Identity = 29/57 (50.88%), Postives = 42/57 (73.68%), Query Frame = 1
Query:    1 AGVTVSDVIADVGCGDGRVLLAAAAVIGCRGIGIDVSPECIAVARESSSAAGVSHLL 171
            AGV  +DV+ D+GCGDGR+++AAA   G RG+G+D+ P  I  AR+++  AGV HL+
Sbjct:   38 AGVRATDVVYDLGCGDGRIVIAAARTWGARGVGVDLDPARIEEARQNARRAGVEHLV 94          
BLAST of mRNA_P-wetherbeei_contig16489.1.1 vs. uniprot
Match: A0A6I5PDX6_9CYAN (Class I SAM-dependent methyltransferase n=1 Tax=Leptolyngbya sp. SIOISBB TaxID=2607771 RepID=A0A6I5PDX6_9CYAN)

HSP 1 Score: 59.3 bits (142), Expect = 1.590e-9
Identity = 29/57 (50.88%), Postives = 42/57 (73.68%), Query Frame = 1
Query:    1 AGVTVSDVIADVGCGDGRVLLAAAAVIGCRGIGIDVSPECIAVARESSSAAGVSHLL 171
            A V  +DV+ D+GCGDGR+L+ AA   G RG+GID+ P+CI   R+++  AGV+HL+
Sbjct:   28 AQVRTNDVLYDLGCGDGRLLIRAAQRWGTRGVGIDIDPDCIQQTRQNAHNAGVTHLI 84          
BLAST of mRNA_P-wetherbeei_contig16489.1.1 vs. uniprot
Match: A0A0C1YFS1_9CYAN (50S ribosomal protein L11 methyltransferase n=3 Tax=Cyanobacteria TaxID=1117 RepID=A0A0C1YFS1_9CYAN)

HSP 1 Score: 59.3 bits (142), Expect = 1.610e-9
Identity = 30/57 (52.63%), Postives = 39/57 (68.42%), Query Frame = 1
Query:    1 AGVTVSDVIADVGCGDGRVLLAAAAVIGCRGIGIDVSPECIAVARESSSAAGVSHLL 171
            A V   DV+ D+GCGDGR+L+ AA   G RG+GID+ P CI   R+++  AGV HLL
Sbjct:   28 AQVGADDVLYDLGCGDGRLLIRAATRWGTRGVGIDIDPACIQQTRQNAQTAGVDHLL 84          
BLAST of mRNA_P-wetherbeei_contig16489.1.1 vs. uniprot
Match: A0A6L8GHX1_9BACT (Class I SAM-dependent methyltransferase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A6L8GHX1_9BACT)

HSP 1 Score: 59.7 bits (143), Expect = 1.870e-9
Identity = 31/57 (54.39%), Postives = 41/57 (71.93%), Query Frame = 1
Query:    1 AGVTVSDVIADVGCGDGRVLLAAAAVIGCRGIGIDVSPECIAVARESSSAAGVSHLL 171
            AGVT SDVI D+GCGDGR+++ AA   G RG+GID+ P+ IA A  ++ A GV  L+
Sbjct:   53 AGVTESDVIYDLGCGDGRIVITAAREYGARGVGIDIDPQRIAEANANAEAEGVQDLV 109          
BLAST of mRNA_P-wetherbeei_contig16489.1.1 vs. uniprot
Match: A0A7K1BCL1_9ACTN (Methyltransferase domain-containing protein n=2 Tax=root TaxID=1 RepID=A0A7K1BCL1_9ACTN)

HSP 1 Score: 60.5 bits (145), Expect = 2.960e-9
Identity = 29/57 (50.88%), Postives = 40/57 (70.18%), Query Frame = 1
Query:    1 AGVTVSDVIADVGCGDGRVLLAAAAVIGCRGIGIDVSPECIAVARESSSAAGVSHLL 171
            A  T  DV+ D+GCGDGRVL+ AA  +GCR IG+++ P  +  AR + +AAGV HL+
Sbjct:  577 AAPTADDVVVDLGCGDGRVLIEAARRVGCRAIGVELDPALVEAARANVAAAGVGHLV 633          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16489.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A350UHU1_9BACT3.220e-1156.14SAM-dependent methyltransferase n=1 Tax=Bryobacter... [more]
A0A7X4HZP6_9BACT9.590e-1152.63Methyltransferase domain-containing protein n=2 Ta... [more]
A0A7C3IF32_9BACT1.270e-1056.14Methyltransferase domain-containing protein n=1 Ta... [more]
A0A350UNR1_9BACT1.780e-1057.69SAM-dependent methyltransferase n=1 Tax=Bryobacter... [more]
A0A2G4JKA2_9BACT1.860e-1054.39SAM-dependent methyltransferase n=1 Tax=Acidobacte... [more]
A0A1F2SEA3_9BACT1.060e-950.88Methyltransf_25 domain-containing protein n=1 Tax=... [more]
A0A6I5PDX6_9CYAN1.590e-950.88Class I SAM-dependent methyltransferase n=1 Tax=Le... [more]
A0A0C1YFS1_9CYAN1.610e-952.6350S ribosomal protein L11 methyltransferase n=3 Ta... [more]
A0A6L8GHX1_9BACT1.870e-954.39Class I SAM-dependent methyltransferase n=1 Tax=Ac... [more]
A0A7K1BCL1_9ACTN2.960e-950.88Methyltransferase domain-containing protein n=2 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16489contigP-wetherbeei_contig16489:642..1332 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2850.Phatr32792
PFAMsDOT1,Methyltransf_31
Model size171
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryno signal peptide or anchor
Exons2
Evalue1.12e-09
EggNOG OGs2E708@1|root,2SDNE@2759|Eukaryota
Ec32 ortholog descriptionS-adenosyl-L-methionine-dependent methyltransferase
Ec32 orthologEc-17_004060.1
Cds size171
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186088.374031-CDS-P-wetherbeei_contig16489:641..6981683186088.374031-CDS-P-wetherbeei_contig16489:641..698Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16489 642..698 -
1683186088.388792-CDS-P-wetherbeei_contig16489:1218..13321683186088.388792-CDS-P-wetherbeei_contig16489:1218..1332Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16489 1219..1332 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16489.1.1prot_P-wetherbeei_contig16489.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig16489 642..1332 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig16489.1.1

>prot_P-wetherbeei_contig16489.1.1 ID=prot_P-wetherbeei_contig16489.1.1|Name=mRNA_P-wetherbeei_contig16489.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=57bp
AGVTVSDVIADVGCGDGRVLLAAAAVIGCRGIGIDVSPECIAVARESSSA
AGVSHLL
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mRNA from alignment at P-wetherbeei_contig16489:642..1332-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig16489.1.1 ID=mRNA_P-wetherbeei_contig16489.1.1|Name=mRNA_P-wetherbeei_contig16489.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=691bp|location=Sequence derived from alignment at P-wetherbeei_contig16489:642..1332- (Phaeothamnion wetherbeei SAG_119_79)
GCAGGCGTTACGGTGTCGGATGTGATTGCTGACGTCGGCTGCGGCGACGG ACGTGTCCTGCTGGCGGCTGCTGCCGTCATCGGCTGCCGCGGCATCGGCA TCGACGTCTCTCCAGTGAGCGAGAAAGGCCGGAAATTCTGGTTGCTGATG CGATGAAAGGCGGCAGTTCAGCTTAGCAGGCCCGATGCTTGCTGGAAACC ACCCAGGCTGTGACAGTCGTCACAATTTGAAAAGCATCGCGGGTAATTGT GGGGAAATGGGCGCTTCGACAAACCAAATGGTTTTGGAATGCAGGTTCTC CATTCGTTGTAGCAAACGGTCGTTGGAGGGAAGCTCAAAGCTTGTGCATG AGGAGAGGAACGGGTCATGGCCAGTAGCGTGGCAACGGTTCGTAGTATTC GAAGCCATGTCTGCCCAGGCCTTGTGCGGTGCAAGTTCACGTCTCTTCTT CCGCTCGTACTTCGTGAACTTGTTCGCCTTTGCATCAGCGCTCGGCACCA AAGAAGCGTTTGCCGCCACCGAAAAGGGCTGGTTTCGCCCCGGTTCGGAC AACCGGTGACTTGTCGCCGCCGCATCCGACCCCGCCTCCCGCCGCTATCG CCACAAAGCACCGGTCCCGCCGGCGCCGCCGCAGGAATGCATTGCAGTGG CGAGGGAAAGCTCGTCGGCGGCCGGCGTCTCGCATCTGCTG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig16489:642..1332-

>mRNA_P-wetherbeei_contig16489.1.1 ID=mRNA_P-wetherbeei_contig16489.1.1|Name=mRNA_P-wetherbeei_contig16489.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=171bp|location=Sequence derived from alignment at P-wetherbeei_contig16489:642..1332- (Phaeothamnion wetherbeei SAG_119_79)
GCAGGCGTTACGGTGTCGGATGTGATTGCTGACGTCGGCTGCGGCGACGG
ACGTGTCCTGCTGGCGGCTGCTGCCGTCATCGGCTGCCGCGGCATCGGCA
TCGACGTCTCTCCAGAATGCATTGCAGTGGCGAGGGAAAGCTCGTCGGCG
GCCGGCGTCTCGCATCTGCTG
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