mRNA_P-wetherbeei_contig1648.3.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1648.3.2 vs. uniprot
Match: A0A835YU42_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU42_9STRA) HSP 1 Score: 159 bits (403), Expect = 2.500e-41 Identity = 100/282 (35.46%), Postives = 152/282 (53.90%), Query Frame = 3
Query: 288 GRVNKEKQTIIPLTIRMIVNAKQDQPDGKFMVDNCELQQVKIVGFIRDVVAMSTNSSYIVEDGTGLLDCRMFHDSDESEQEVERRDALVQHTFVRVYGSVRFFDGKASDAYGTMHMTVNNIRPIEDTNELTYHALEVIYVHLLHTRGPLNAPAGGAAAG--GXXXXXXXXXXXXXXXGFRQPQFGGSPQQQS---FNGXXXXXXXXXXGDGMMA---FTAKQQMVVECFTGGGGETGISIQTAVQQLGPRGVTAAEVREIVGQLAGEGHLYSTTDEEHFKST 1109
GR ++EKQ+I+PLTI+ ++ ++ D PD K VD E+ V++VG I D+ STN+ + +EDGTG +D ++F + DES+ + ERR + +V V G ++ + K +H+ +IRP+EDTN++T H LE IY HL +T GPL GGAA G G GF + GG+ QQ + FNG G G M Q +++ F G+S+ L P+G+ ++R+ V L+ EGH+Y+T D+ H+KST
Sbjct: 28 GRPSREKQSIMPLTIKQVLESQHDNPDDKPKVDGVEIVHVRLVGCIIDINEHSTNAVFKIEDGTGRIDAKVFIEQDESQLQTERRSRCREGVYVAVVGQIKRWQDK-------LHVHAFDIRPLEDTNQITQHFLEAIYAHLHNTLGPLRKAPGGAAGGIGGAAGAQPMAVANYGSPGFARQ--GGAAQQGNYGAFNG----------GGGEMDSNNLAPLHQKLLDIFQADTNPHGLSLDYCADVLKPQGIGYDDIRDAVVYLSSEGHIYTTVDDFHYKST 290
BLAST of mRNA_P-wetherbeei_contig1648.3.2 vs. uniprot
Match: A0A7S2SSA9_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SSA9_9STRA) HSP 1 Score: 155 bits (391), Expect = 1.690e-39 Identity = 112/325 (34.46%), Postives = 150/325 (46.15%), Query Frame = 3
Query: 147 EGRMEYGAQGG--GYXXXXXXXFIQGANGSPGYPDGSPAGXXXXXXXXXGRVNKEKQTIIPLTIRMIVNAKQDQPDGKFMVDNCELQQVKIVGFIRDVVAMSTNSSYIVEDGTGLLDCRMFHDSDESEQEVERRDALVQHTFVRVYGSVRFFDGKASDAYGTMHMTVNNIRPIEDTNELTYHALEVIYVHLLHTRGPLNAPAGGAAAGGXXXXXXXXXXXXXXXGFRQPQFGGSPQQQSFNGXXXXXXXXXXGDGMMAFTAKQQMVVECFT--GGGGETGISIQTAVQQLGPRGVTAAEVREIVGQLAGEGHLYSTTDEEHFKST 1109
EG +YG+ GG G+ G +G G A + ++++QT+IP TIR I A D +D EL QV++V + V ST Y VED TG++ +M++D DE+E RR A Q +VR++ ++ F+G+ S +T +IRP+ED NE+T H LE IY+HL HT+GP APA AAG GF P + G G FT Q +E G+ +Q VQQLG G A VR V LA EGHLYST DEEH+K T
Sbjct: 4 EGGFDYGSTGGFGGFGGPSDGLAFGGGSGG-----GFMASQTDGASPGTKKASRDRQTVIPFTIRQIKGATIGHADDPVKIDGVELAQVRLVANVMQVTEQSTYVVYDVEDCTGMIQVKMWNDQDENEMTATRRAACRQGVYVRIHAYLKVFNGQIS-------VTAVDIRPVEDQNEITCHMLEAIYIHLQHTQGPKQAPA--TAAG-----WNSTSSGFGTGGFNPPPGNNLSSTMALEGV----------SGNSGFTPVQAKALEAVNQIDSMDGPGVHVQAIVQQLGTSGFDAGAVRAAVEFLASEGHLYSTVDEEHYKVT 299
BLAST of mRNA_P-wetherbeei_contig1648.3.2 vs. uniprot
Match: A0A2D4CEA7_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CEA7_PYTIN) HSP 1 Score: 135 bits (341), Expect = 2.580e-32 Identity = 97/276 (35.14%), Postives = 148/276 (53.62%), Query Frame = 3
Query: 291 RVNKEKQTIIPLTIRMIVNAKQDQPDGKFMVDNCELQQVKIVGFIRDVVAMSTNSSYIVEDGTGLLDCRMFHDSDESEQEVERRDALVQHTFVRVYGSVRFFDGKASDAYGTMHMTVNNIRPIEDTNELTYHALEVIYVHLLHTRGPLNAPAGGAAAG--GXXXXXXXXXXXXXXXGFRQPQFGGSPQQQSFNGXXXXXXXXXXGDGM-MAFTAKQQMVVECFTGGGGETGISIQTAVQQLGPRGVTAAEVREIVGQLAGEGHLYSTTDEEHFKST 1109
R+ ++ QT++P+T+R ++N + + D VD E+ V++VG + +VV STN ++ ++DGTG++D R+F D+ E+ E L +VR GS+R F + S + + PI D NE+T+H LE IYVH HT+GPL + G AA GXXXXXXXXXX F QPQ + + G M +F+ +Q+ +++ + G+ I QL R +T ++R+ + L EGH+YST DE HFK T
Sbjct: 46 RIARDAQTLVPVTVRQLLN--RSETDDSIRVDGHEMSNVRVVGLLGNVVPHSTNVNFQLDDGTGVIDGRLFLHGDDLERAEEEIAKLRDGMYVRAVGSLRQFQDRLS-------LNCFTLTPITDFNEITHHFLETIYVHCYHTKGPLQSSGGAKAAADSGXXXXXXXXXXGSQLNAFGQPQQSWNQMNSGYLGHSGGAAMGAMDYNMESSFSPEQKAILDVLGTCTSDRGVKIDEIFGQLRGR-ITEDQLRDALNYLTSEGHVYSTIDENHFKRT 311
BLAST of mRNA_P-wetherbeei_contig1648.3.2 vs. uniprot
Match: A0A7S2B4J1_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B4J1_9STRA) HSP 1 Score: 130 bits (328), Expect = 2.860e-31 Identity = 101/249 (40.56%), Postives = 137/249 (55.02%), Query Frame = 3
Query: 366 DGKFMVDNCELQQVKIVGFIRDVVAMSTNSSYIVEDGTGLLDCRMFHDSDESEQEVERRDALVQHTFVRVYGSVRFFDGKASDAYGTMHMTVNNIRPIEDTNELTYHALEVIYVHLLHTRGPLNAPAGGAAAGGXXXXXXXXXXXXXXXGFRQPQFGGSPQQQSFNGXXXXXXXXXXGDGMMAFTAKQQMVVECFTGGG-GETGISIQTAVQQLGPRGVTAAEVREIVGQLAGEGHLYSTTDEEHFKST 1109
D + VD ++ Q+K+VG I + ST + Y +EDGTG++DC+++ D+ +SE + E+R Q ++VR G +R F G AS + + ++RP+ D NE+T+H LE IYVHL +T+G NA XXXXXXXXXXXX GF P + + G G F+ Q V+ FT G GE G SI AV+ L G VRE V L+ EGHLYST D+EHFKST
Sbjct: 11 DSNYKVDGQDIHQLKLVGNILSIEEHSTYAVYKIEDGTGVVDCKLWIDAGDSEADAEKRALCRQGSYVRAVGVLRDFQGNAS-------VQLYDMRPVTDHNEITHHMLEAIYVHLQNTKGSKNA-----GQPXXXXXXXXXXXXXGVGGFNAPAVNTNLNSAMAS----------DGQGSGDFSTVQTEVLAYFTNNGSGEEGASINDAVKSLCANGHHDQAVRETVEFLSNEGHLYSTIDDEHFKST 237
BLAST of mRNA_P-wetherbeei_contig1648.3.2 vs. uniprot
Match: L1IVT0_GUITC (Replication protein A2, 32kDa n=2 Tax=Guillardia theta TaxID=55529 RepID=L1IVT0_GUITC) HSP 1 Score: 130 bits (326), Expect = 1.850e-30 Identity = 94/276 (34.06%), Postives = 133/276 (48.19%), Query Frame = 3
Query: 288 GRVNKEKQTIIPLTIRMIVNAKQDQPDGKFMVDNCELQQVKIVGFIRDVVAMSTNSSYIVEDGTGLLDCRMFHDSDESEQEVERRDALVQHTFVRVYGSVRFFDGKASDAYGTMHMTVNNIRPIEDTNELTYHALEVIYVHLLHTRGPL--NAPAGGAAAGGXXXXXXXXXXXXXXXGFRQPQFGGSPQQQSFNGXXXXXXXXXXGDGMMAFTAKQQMVVECFTGGGGETGISIQTAVQQLGP---RGVTAAEVREIVGQLAGEGHLYSTTDEEHF 1100
G+ + ++ ++P++I+ ++NA QD D +D + +QV I+ +I DV ST+ ++ +EDGTG +D M+ D DESE V R V T+VRV G VR +GK S M ++R + D NELTYH + I+ HL +TRGPL + P G + GF SP Q G G + F G TG+SI VQQ+ R V+ AEV + LA +GH+YST DEEHF
Sbjct: 27 GKKSNAEKGMLPVSIKQVMNAPQDSQDEDIKIDGRDTKQVTIIAYIVDVKETSTSVTFSLEDGTGNIDAIMWIDQDESEFMVRSRAEWVVGTYVRVVGQVRSHNGKRS-------MVAFHLRTVTDFNELTYHLFDTIHAHLYNTRGPLADSKPQTGFPSSSFQSPGKPSMGP----GFT------SPSQPGGAGAGRVDSSRPAGGPVTDMREAVHKAFIDFGATGDLTGLSIDNCVQQVSRVMGRSVSRAEVSSHIENLALDGHIYSTIDEEHF 285
BLAST of mRNA_P-wetherbeei_contig1648.3.2 vs. uniprot
Match: D8LPM7_ECTSI (RPA_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPM7_ECTSI) HSP 1 Score: 130 bits (328), Expect = 2.400e-30 Identity = 97/281 (34.52%), Postives = 141/281 (50.18%), Query Frame = 3
Query: 306 KQTIIPLTIRMIVNAKQDQPDGKFMVDNCELQQVKIVGFIRDVVAMSTNSSYIVEDGTGLLDCRMFHDSDE--SEQEVERRDALVQHTFVRVYGSVRFF-DGKASDAYGTMHMTVNNIRPIEDTNELTYHALEVIYVHLLHTRGPLNAPAGGAAAGGXXXXXXXXXXXXXXXGFRQPQFGGSPQQQSFNGXXXXXXXXXXG----------DGMMAFTAKQQMVVECFTGGGGETGISIQTAVQQLGPRGVTAAEVREIVGQLAGEGHLYSTTDEEHFKST 1109
+Q+++ + I+ ++ ++ D +D ++ Q+K+VG I +V STN+ Y VED TG L +MFH+ E +++ E+R T+VRV+G+VR + D + S AY + PI D +E+T HALE IY HL +T+GPL P + GG G P F G Q F XXXXXX +G FT QQ V + F G E G SI L G++ +V V L+ EGHLYST D++H++ST
Sbjct: 64 QQSLLSVNIKQVLESEMANQDSGAKIDGADVSQIKLVGCIVEVDEASTNTEYTVEDTTGRLKVKMFHNDGEGANDRAAEKRARCQVGTYVRVFGNVRSWKDDRHSVAY--------TMTPITDMDEVTLHALETIYTHLFNTKGPL--PGKASTFGGAGVAQPMN-------GVGSPGFNGGSSQHGFTSPGNNXXXXXXXXMYNNSNMDPEGSKGFTPIQQKVHDQFLGADEEQGRSIAEVADSLTREGISRTDVSTAVQFLSSEGHLYSTIDDDHYRST 327
BLAST of mRNA_P-wetherbeei_contig1648.3.2 vs. uniprot
Match: A0A1Y1Z7U3_9FUNG (Replication protein A, subunit RPA32 n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Z7U3_9FUNG) HSP 1 Score: 127 bits (320), Expect = 9.390e-30 Identity = 89/287 (31.01%), Postives = 134/287 (46.69%), Query Frame = 3
Query: 249 SPAGXXXXXXXXXGRVNKEKQTIIPLTIRMIVNAKQDQPDGKFMVDNCELQQVKIVGFIRDVVAMSTNSSYIVEDGTGLLDCRMFHDSDESEQEVERRDALVQHTFVRVYGSVRFFDGKASDAYGTMHMTVNNIRPIEDTNELTYHALEVIYVHLLHTRGPLNAPAGGAAAGGXXXXXXXXXXXXXXXGFRQPQFGGSPQQQSFNGXXXXXXXXXXGDGMMAFTAKQQMVVECFTGGGGETGISIQTAVQQLGPRGVTAAEVREIVGQLAGEGHLYSTTDEEHFKST 1109
SP G R Q + P++I+ ++ A Q D F VD EL Q+ +G IR STN SYIVEDGTG +D R + ++D++E + ++R LV+ +VRV G + F K H+ ++RPIED NE+T+H LEV+YVHL TR P G G+ QP F G P + G + + ++ + G+ +++ Q+L + AE+ + + L GEGHLYST D++H + T
Sbjct: 16 SPFGESASTPTGTKRGGAAAQNLTPVSIKQLLEATQIHADAPFKVDEHELSQITFIGIIRRQSEQSTNVSYIVEDGTGSIDVRTWLENDDNEIQQQKRAQLVEGIYVRVVGQFKQFASKR-------HVVAFSMRPIEDYNEITHHFLEVVYVHLFRTRNPSVKHEG-------------------EQGY-QPSFSGDPFNPTGQYGNQAYKQPEPVYGNEFKPSHKAIIYAIKSFPDTNEGVHVESIAQKLSSQ-FGRAEISQAIEWLVGEGHLYSTIDDDHVRCT 274
BLAST of mRNA_P-wetherbeei_contig1648.3.2 vs. uniprot
Match: A0A8J1Y0G4_OWEFU (Ofus.G111103 protein n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1Y0G4_OWEFU) HSP 1 Score: 125 bits (314), Expect = 5.320e-29 Identity = 94/289 (32.53%), Postives = 141/289 (48.79%), Query Frame = 3
Query: 249 SPAGXXXXXXXXXGRVNKEKQT-IIPLTIRMIVNAKQDQPDGKFMVDNCELQQVKIVGFIRDVVAMSTNSSYIVEDGTG-LLDCRMFHDSDESEQEVERRDALVQHTFVRVYGSVRFFDGKASDAYGTMHMTVNNIRPIEDTNELTYHALEVIYVHLLHTRGPLNAPAGGAAAGGXXXXXXXXXXXXXXXGFRQPQFGGSPQQQSFNGXXXXXXXXXXGDGMMAFTAKQQMVVECFTGGGGETGISIQTAVQQLGPRGVTAAEVREIVGQLAGEGHLYSTTDEEHFKST 1109
SPAG G + + + IIP TI +++A D +F+ D EL QV IVG ++ V T Y ++DGTG +++ + F D+DES E ER ++++T+VRVYG++R F GK ++T + PI D NELT H LE I VHL L P G + +P + ++ G D M+ +QQ++ E GISIQ +QQL RG+ +R+ V L+GEGH++ST D++H++ST
Sbjct: 19 SPAGGGFSSPQSQGGEKRARPSNIIPCTIAQVLSANHD--GDRFIADGFELHQVTIVGLVKSVSVAPTRIDYGLDDGTGPIIEVKQFVDNDESVPEEERVSPMMENTYVRVYGNLRSFQGK-------QNITAFKVLPITDMNELTSHILETIKVHL-----ELTQPVSANQTNGHH------------------ETNATPAKNTYAGAMT--------DNSMS-NVQQQVLTIIRGSASDEAGISIQNIMQQL--RGLPEKAIRDSVEFLSGEGHIFSTIDDDHYRST 264
BLAST of mRNA_P-wetherbeei_contig1648.3.2 vs. uniprot
Match: A0A1V9Z400_9STRA (Replication protein A 32 kDa subunit n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z400_9STRA) HSP 1 Score: 125 bits (315), Expect = 5.470e-29 Identity = 88/283 (31.10%), Postives = 136/283 (48.06%), Query Frame = 3
Query: 288 GRVNKEKQTIIPLTIRMIVNA-KQDQPDGKFMVDNCELQQVKIVGFIRDVVAMSTNSSYIVEDGTGLLDCRMFHDSDESEQEVERRDALVQHTFVRVYGSVRFFDGKASDAYGTMHMTVNNIRPIEDTNELTYHALEVIYVHLLHTRGPLNA--------PAGGAAAGGXXXXXXXXXXXXXXXGFRQPQFGGSPQQQSFNGXXXXXXXXXXGDGMMAFTAKQQMVVECFTGGGGETGISIQTAVQQLGPRGVTAAEVREIVGQLAGEGHLYSTTDEEHFKST 1109
G +++ QT+ P+T+R ++ A + + D VD E+ V+IVG + DV STN ++ V DGTGL+ R+F +D+ + + ++L +V G++R F GK S +T ++ P+E+ N++T+H LE IY HL + G LN+ P GA GG F GG QQ ++ QQ +++ + G+SI QQL R + A++RE +G L EGH+YST DE HFK T
Sbjct: 28 GGNSRDNQTLTPVTVRQLMAAIRAEGGDDTVHVDGKEVNNVEIVGLLTDVSQNSTNITFSVNDGTGLISARLFLQADDDHYQQQLVESLRDGVYVAAVGNLRTFGGKTS-------LTCFSVTPVENFNQVTHHFLECIYTHLRNVHGALNSAPTAMKQDPGFGAQTGGYNS-------------FGMSTGGGFGQQSTYQNFAATDSGFSD--------PGQQAILDILGASSLDMGLSIDQIKQQLNGR-LNDAQLREALGYLTNEGHIYSTIDENHFKRT 281
BLAST of mRNA_P-wetherbeei_contig1648.3.2 vs. uniprot
Match: A0A433QK24_9FUNG (RPA_C domain-containing protein (Fragment) n=2 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433QK24_9FUNG) HSP 1 Score: 127 bits (318), Expect = 9.600e-29 Identity = 82/267 (30.71%), Postives = 134/267 (50.19%), Query Frame = 3
Query: 309 QTIIPLTIRMIVNAKQDQPDGKFMVDNCELQQVKIVGFIRDVVAMSTNSSYIVEDGTGLLDCRMFHDSDESEQEVERRDALVQHTFVRVYGSVRFFDGKASDAYGTMHMTVNNIRPIEDTNELTYHALEVIYVHLLHTRGPLNAPAGGAAAGGXXXXXXXXXXXXXXXGFRQPQFGGSPQQQSFNGXXXXXXXXXXGDGMMAFTAKQQMVVECFTGGGGETGISIQTAVQQLGPRGVTAAEVREIVGQLAGEGHLYSTTDEEHFKST 1109
Q++ P+T++ ++ A Q D F +D ++ QV V IR++ STN SY++EDGTG +D R + D D+S+ E ++R + ++RV G + ++ K H+ +IRP++D NE++YH L+ +YVHL+ T+G L + A AAA G + + NG D + KQ+ G + GI +Q V+QLG E+R+ + L+GEGHL+ST D++H + T
Sbjct: 108 QSLRPVTVKQLITAVQPHADADFKIDGGDISQVTFVAVIREITEQSTNVSYLMEDGTGQIDVRKWIDVDDSDHEAQKRSEWREGAYMRVIGHLNLYNQKR-------HVVAYHIRPVKDHNEVSYHQLDALYVHLMFTKGLLPSLATPAAAASNGNGHSFNGSAYNPHNASA----GIYRTGTANGESSRFPNPLYND--IIKITKQR--------GDAQEGIHVQELVRQLGQ--FPPNEIRQAIEWLSGEGHLFSTIDDDHVQVT 351 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1648.3.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1648.3.2 >prot_P-wetherbeei_contig1648.3.2 ID=prot_P-wetherbeei_contig1648.3.2|Name=mRNA_P-wetherbeei_contig1648.3.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=321bp MEYGAQGGGYFGGGGGGFIQGANGSPGYPDGSPAGGGGGGGGAGGRVNKEback to top mRNA from alignment at P-wetherbeei_contig1648:1200..4072- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1648.3.2 ID=mRNA_P-wetherbeei_contig1648.3.2|Name=mRNA_P-wetherbeei_contig1648.3.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2873bp|location=Sequence derived from alignment at P-wetherbeei_contig1648:1200..4072- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1648:1200..4072- >mRNA_P-wetherbeei_contig1648.3.2 ID=mRNA_P-wetherbeei_contig1648.3.2|Name=mRNA_P-wetherbeei_contig1648.3.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=963bp|location=Sequence derived from alignment at P-wetherbeei_contig1648:1200..4072- (Phaeothamnion wetherbeei SAG_119_79)back to top |