mRNA_P-wetherbeei_contig1646.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1646.1.1 vs. uniprot
Match: A0A6H5KR51_9PHAE (Transmembrane protein 267 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR51_9PHAE) HSP 1 Score: 116 bits (290), Expect = 9.700e-29 Identity = 67/118 (56.78%), Postives = 83/118 (70.34%), Query Frame = 1
Query: 25 AVTKQLIAATLLGSALDVDHFLAAGSVRLSDASSLQHRPFGHCVAFAAAAALALGS----TRAGVMVFSAVLSHQLRDATRRGLWLWP--GRSTPPLPYPLYLAALAILPLAVGAALR 360
AV + + A +GSALD+DHFLAAGSVRLS A++L RP+GHCVA AA A+ + RA V VFSA +HQLRD+TRRGLWL+P G TPP+ YP+YL A A+LPL + LR
Sbjct: 182 AVALEALFAACVGSALDLDHFLAAGSVRLSRATALAGRPWGHCVAALIVAAFAVAALTRNARAAVCVFSAGATHQLRDSTRRGLWLYPPRGAKTPPVSYPIYLLAQALLPLVMAMCLR 299
BLAST of mRNA_P-wetherbeei_contig1646.1.1 vs. uniprot
Match: A0A7S2W8E3_9STRA (Transmembrane protein 267 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W8E3_9STRA) HSP 1 Score: 105 bits (261), Expect = 1.070e-26 Identity = 57/96 (59.38%), Postives = 68/96 (70.83%), Query Frame = 1
Query: 73 DVDHFLAAGSVRLSDASSLQHRPFGHCVAFA----AAAALALGSTRAGVMVFSAVLSHQLRDATRRGLWLWPGRSTPPLPYPLYLAALAILPLAVG 348
D+DHFLAAGS+RL DA+ L HRPFGH + A A AAL R GV+V +A+LSHQLRDA RRG+WL+P ST PLP+P+YL L LPL V
Sbjct: 1 DLDHFLAAGSLRLQDATRLSHRPFGHALLAAGCLGALAALLTRQRRKGVLVATAILSHQLRDALRRGMWLFPLGSTAPLPFPVYLVCLFSLPLLVA 96
BLAST of mRNA_P-wetherbeei_contig1646.1.1 vs. uniprot
Match: D7FYK9_ECTSI (Transmembrane protein 267 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYK9_ECTSI) HSP 1 Score: 95.5 bits (236), Expect = 4.640e-22 Identity = 58/102 (56.86%), Postives = 71/102 (69.61%), Query Frame = 1
Query: 10 AARPRAVTK-QLIAATLLGSALDVDHFLAAGSVRLSDASSLQHRPFGHCVAFAAAAALALGS----TRAGVMVFSAVLSHQLRDATRRGLWLWP--GRSTPP 294
A RP A +++ A +GSALD+DHFLAAGSVRLS A++L RP+GHCVA AA A+ + RA V VFSA +HQLRD+TRRGLWL+P G TPP
Sbjct: 51 ARRPSAAAALEVLFAACVGSALDLDHFLAAGSVRLSRATALAGRPWGHCVAALIVAAFAVAALTRNARAAVCVFSAGATHQLRDSTRRGLWLYPPRGPKTPP 152
BLAST of mRNA_P-wetherbeei_contig1646.1.1 vs. uniprot
Match: A0A024UG16_9STRA (Transmembrane protein 267 n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UG16_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 2.590e-21 Identity = 57/119 (47.90%), Postives = 72/119 (60.50%), Query Frame = 1
Query: 37 QLIAATLLGSALDVDHFLAAGSVRLSDASSLQHRPFGHCVAFAAAAAL-------ALGSTRAGVMVFSAVLSHQLRDATRRGLWLWPGRSTPPLPYPLYLAALAILPLAVGAALRRTSK 372
+ IAA +GS LD DHF+AA + L A+SL RP+GH V F A AL A + R ++F +LSHQLRD+ RRGLW P STPPLPY +YL ++PL VG LR S+
Sbjct: 17 EAIAAVAVGSLLDADHFVAARAFSLRAATSLNDRPWGHSVTFIIAVALIAWKALPAPFNLRGAALLFVCLLSHQLRDSFRRGLWFAPLGSTPPLPYWVYLVLEVLVPLGVGTWLRCHSR 135
BLAST of mRNA_P-wetherbeei_contig1646.1.1 vs. uniprot
Match: A0A482SJG6_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SJG6_9ARCH) HSP 1 Score: 91.7 bits (226), Expect = 1.880e-20 Identity = 51/103 (49.51%), Postives = 67/103 (65.05%), Query Frame = 1
Query: 34 KQLIAATLLGSALDVDHFLAAGSVRLSDASSLQHRPFGHCVAFAAAAALAL----GSTRAGVMVFSAVLSHQLRDATRRGLWLWP-GRSTPPLPY----PLYL 315
K+L A ALDVDHF+AAGS L DA++L HRPFGH +AF +L ++R ++F A+LSH LRD+ +RGLWLWP STPP+P+ P+YL
Sbjct: 80 KELALAGFTSCALDVDHFIAAGSASLQDATNLPHRPFGHALAFVPCVSLLYYAVSRNSRTAKLLFVALLSHHLRDSMKRGLWLWPMDYSTPPIPFYYVFPMYL 182
BLAST of mRNA_P-wetherbeei_contig1646.1.1 vs. uniprot
Match: A0A024GKZ5_9STRA (Transmembrane protein 267 n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024GKZ5_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 7.860e-20 Identity = 48/106 (45.28%), Postives = 66/106 (62.26%), Query Frame = 1
Query: 67 ALDVDHFLAAGSVRLSDASSLQHRPFGHCVAFAAAAALALGSTRAG----------VMVFSAVLSHQLRDATRRGLWLWPGRSTPPLPYPLYLAALAILPLAVGAA 354
A+D+DHF+AAGS R+ A++L+ RPF H AF A + + AG +++ A+ SHQLRDA R G+WLWP STPP+PY LYL +LPL++ A
Sbjct: 78 AMDLDHFIAAGSFRIDAATNLKKRPFAHAFAFIALMCVFVWIQSAGNTKVVRFQRVALLWIALSSHQLRDAVRHGVWLWPFGSTPPIPYALYLFIQVLLPLSIARA 183
BLAST of mRNA_P-wetherbeei_contig1646.1.1 vs. uniprot
Match: UPI00096AEC5F (transmembrane protein 267 n=1 Tax=Aethina tumida TaxID=116153 RepID=UPI00096AEC5F) HSP 1 Score: 88.6 bits (218), Expect = 2.250e-19 Identity = 47/114 (41.23%), Postives = 68/114 (59.65%), Query Frame = 1
Query: 34 KQLIAATLLGSALDVDHFLAAGSVRLSDASSLQHRPFGHCVAFAAAAALALGSTR----------AGVMVFSAVLSHQLRDATRRGLWLWPGRSTPPLPYPLYLAALAILPLAV 345
K++ TLL S +D+DHF+AA S+ L DA++LQ RPF HC + A L + ++ AG+++ +A SH RDATRRG WL P STPP+PY +Y+ +P +
Sbjct: 67 KEIALCTLLSSCIDLDHFIAAHSIHLKDATNLQSRPFLHCTTYPLAFVLFVLTSSVYCKSGLLKTAGLLLLAAFASHHTRDATRRGFWLHPFGSTPPIPYYVYVGITCFIPYVI 180
BLAST of mRNA_P-wetherbeei_contig1646.1.1 vs. uniprot
Match: A0A1V9ZFX0_9STRA (Transmembrane protein 267 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZFX0_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 2.290e-19 Identity = 55/106 (51.89%), Postives = 65/106 (61.32%), Query Frame = 1
Query: 43 IAATLLGSALDVDHFLAAGSVRLSDASSLQHRPFGHCVAFAAAAALALGST-------RAGVMVFSAVLSHQLRDATRRGLWLWPG-RSTPPLPYPLYLAALAILP 336
+ A L+GS LD+DHF+AA A+SL RP GH VAF AA AL + RA +V +LSHQLRDA RRGLW+ PG STPPLPY +YLA LP
Sbjct: 122 VIALLIGSLLDLDHFVAAAGWTFQAATSLSERPLGHAVAFIAAIALVVWCACPRSRRIRAVALVLVCLLSHQLRDAFRRGLWIAPGVGSTPPLPYAMYLALELSLP 227
BLAST of mRNA_P-wetherbeei_contig1646.1.1 vs. uniprot
Match: UPI0014255E17 (transmembrane protein 267-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI0014255E17) HSP 1 Score: 88.2 bits (217), Expect = 5.930e-19 Identity = 51/115 (44.35%), Postives = 65/115 (56.52%), Query Frame = 1
Query: 34 KQLIAATLLGSALDVDHFLAAGSVRLSDASSLQHRPFGHCVAFAAAAAL-------ALGSTRAGVMVFSAVLS---HQLRDATRRGLWLWPGRSTPPLPYPLYLAALAILPLAVG 348
+Q+I A +L S +DVDHFLAA S+ L DA+SLQ RP H A+ A G R + LS H +RDATRRGLWLWP STPP+PY +Y+ +LP +
Sbjct: 90 RQIILAGILASCMDVDHFLAARSIHLKDATSLQQRPLFHMTTLIPVIAIISEIIICASGLHRLHYFPYLFTLSWFSHHIRDATRRGLWLWPFGSTPPVPYGMYIGLTLVLPFLIA 204
BLAST of mRNA_P-wetherbeei_contig1646.1.1 vs. uniprot
Match: A0A2P8ZFL3_BLAGE (Transmembrane protein 267 n=1 Tax=Blattella germanica TaxID=6973 RepID=A0A2P8ZFL3_BLAGE) HSP 1 Score: 87.4 bits (215), Expect = 6.140e-19 Identity = 49/104 (47.12%), Postives = 62/104 (59.62%), Query Frame = 1
Query: 55 LLGSALDVDHFLAAGSVRLSDASSLQHRPFGHCVAFAAAAALALGST----------RAGVMVFSAVLSHQLRDATRRGLWLWPGRSTPPLPYPLYLAALAILP 336
LLGSA+D+DHF AA S +L DA L RPF HC + A +A+ R ++ +A+LSH +RDATRRG W+WP STPP+PY YL A LP
Sbjct: 72 LLGSAIDLDHFAAAKSFKLQDARMLTSRPFMHCTSLPLAVFIAVSLPAYLYHWTSVQRLLWIMLAAILSHHIRDATRRGFWMWPFGSTPPVPYVYYLLANMSLP 175 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1646.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1646.1.1 >prot_P-wetherbeei_contig1646.1.1 ID=prot_P-wetherbeei_contig1646.1.1|Name=mRNA_P-wetherbeei_contig1646.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=125bp RSDAARPRAVTKQLIAATLLGSALDVDHFLAAGSVRLSDASSLQHRPFGHback to top mRNA from alignment at P-wetherbeei_contig1646:3165..4020+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1646.1.1 ID=mRNA_P-wetherbeei_contig1646.1.1|Name=mRNA_P-wetherbeei_contig1646.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=856bp|location=Sequence derived from alignment at P-wetherbeei_contig1646:3165..4020+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1646:3165..4020+ >mRNA_P-wetherbeei_contig1646.1.1 ID=mRNA_P-wetherbeei_contig1646.1.1|Name=mRNA_P-wetherbeei_contig1646.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=375bp|location=Sequence derived from alignment at P-wetherbeei_contig1646:3165..4020+ (Phaeothamnion wetherbeei SAG_119_79)back to top |