mRNA_P-wetherbeei_contig1644.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1644.3.1 vs. uniprot
Match: M9M608_PSEA3 (Mis18 domain-containing protein n=3 Tax=Moesziomyces TaxID=63261 RepID=M9M608_PSEA3) HSP 1 Score: 78.6 bits (192), Expect = 3.210e-14 Identity = 46/128 (35.94%), Postives = 67/128 (52.34%), Query Frame = 1
Query: 58 DHNDEISAPLVFLCVGCRSVLGDTWAFVSSDAATKSVTLRGTPCRVSPKCLFGFVHIKGENLPCLFTFLGRSERHHQGAGASATIGRTYISTPRHLDAMRDMFVFDTDAICSYELGRCELLSEVDDPP 441
D + ++ PLVF C C +LGD++AFV++D V L VS F G+++ F L + G AT+GRTY +TPRHLD +RD D DA+ +Y LG L ++++PP
Sbjct: 167 DDAEPVAEPLVFQCRQCFRLLGDSFAFVATDTELGYVVLSDVSDVVSQDTTFQTSTQPGKDMGATFALL-------RCGGCKATVGRTYRTTPRHLDDLRDCASLDVDAVTTYRLGSNATL-QLEEPP 286
BLAST of mRNA_P-wetherbeei_contig1644.3.1 vs. uniprot
Match: A0A8K1CW57_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CW57_PYTOL) HSP 1 Score: 71.6 bits (174), Expect = 5.460e-12 Identity = 43/117 (36.75%), Postives = 65/117 (55.56%), Query Frame = 1
Query: 70 EISAPLVFLCVGCRSVLGDTWAFVSSDAATKSVTLRG-TPCRVSPKCLFGFVHIKGENLPCLFTFLGRSERHHQGAGASATIGRTYISTPRHLDAMRDMFVFDTDAICSYELGRCEL 417
E++AP+VF C CRS+ GD+++FVSS+A VTL T V+P+ L G ++ F L + +GR Y++TP +LDA+R ++ F T I SY+LG +L
Sbjct: 129 EVTAPVVFQCGTCRSIFGDSYSFVSSNAELLLVTLNAVTNVAVAPEALTAK---DGPDIGSAFQELLCKQ-------CQTVLGRKYLTTPNNLDAIRGLYSFSTTCIASYQLGYPQL 235
BLAST of mRNA_P-wetherbeei_contig1644.3.1 vs. uniprot
Match: UPI000A2A5E8B (protein Mis18-alpha n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A5E8B) HSP 1 Score: 70.1 bits (170), Expect = 8.190e-12 Identity = 46/130 (35.38%), Postives = 70/130 (53.85%), Query Frame = 1
Query: 58 DHNDEI----SAPLVFLCVGCRSVLGDTWAFVSSDAATKSVTLRGTPCRVSPKCLFGFVHI----------KGENLPCLFTFLGRSERHHQGAGASATIGRTYISTPRHLDAMRDMFVFDTDAICSYELG 405
D N+E + PLVF CVGCR+++GD+ ++V +D ++V+L V+P FVH+ +GE+L F L + A + IGR Y +TP+ LD +RDM+ D +I SY+LG
Sbjct: 9 DRNEEDDPLDTIPLVFHCVGCRTIIGDSLSWVCADQNLRTVSLSA----VTP-----FVHVATEDGMEISAEGEDLGSTFVVL-------KCATCQSQIGRIYKTTPKQLDMIRDMYTLDCSSIKSYKLG 122
BLAST of mRNA_P-wetherbeei_contig1644.3.1 vs. uniprot
Match: A0A3P8ZUE9_ESOLU (MIS18 kinetochore protein A n=2 Tax=Esox lucius TaxID=8010 RepID=A0A3P8ZUE9_ESOLU) HSP 1 Score: 69.3 bits (168), Expect = 1.520e-11 Identity = 44/118 (37.29%), Postives = 60/118 (50.85%), Query Frame = 1
Query: 61 HNDEISAPLVFLCVGCRSVLGDTWAFVSSDAATKSVTLRGTPCRVSPKCLFGF-VHIKG--ENLPCLFTFLGRSERHHQGAGASATIGRTYISTPRHLDAMRDMFVFDTDAICSYELG 405
D+I AP+VFLC C+ +GD+ ++ S+ + L+ RVS + G HI G + L CL H G S+ +G YISTPR LD +R +F D AI SY LG
Sbjct: 63 EEDDIDAPVVFLCGSCKLPVGDSLSWAGSEEENNQIILK----RVSDNVIVGKETHIAGTIKELGCLVV-------HLTCGGCSSLLGLVYISTPRKLDYIRSLFCLDVAAIESYVLG 169
BLAST of mRNA_P-wetherbeei_contig1644.3.1 vs. uniprot
Match: A0A397TLI7_9GLOM (Yippee zinc-binding/DNA-binding /Mis18, centromere assembly-domain-containing protein n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=A0A397TLI7_9GLOM) HSP 1 Score: 68.2 bits (165), Expect = 3.620e-11 Identity = 39/122 (31.97%), Postives = 67/122 (54.92%), Query Frame = 1
Query: 55 PDHN---DEISAPLVFLCVGCRSVLGDTWAFVSSDAATKSVTLRGTP--CRVSPKCLFGFVHIKGENLPCLFTFLGRSERHHQGAGASATIGRTYISTPRHLDAMRDMFVFDTDAICSYELG 405
P HN EI+ PLVF C+ CR ++GD++AFV++D SV L P R+ L+ +G ++ + + + G ++T+G+ + +TPR LD +RD++ + D + Y+LG
Sbjct: 14 PQHNRVLQEITGPLVFQCLKCRLIVGDSFAFVAADRELNSVVLYAKPHNLRIGTDLLWSR---EGIDIGSTYIMIYCN-------GCNSTLGKVWRTTPRKLDYIRDLYTLNLDYVMIYQLG 125
BLAST of mRNA_P-wetherbeei_contig1644.3.1 vs. uniprot
Match: A0A015K6Q5_RHIIW (Mis18 domain-containing protein n=6 Tax=Rhizophagus TaxID=1129544 RepID=A0A015K6Q5_RHIIW) HSP 1 Score: 68.2 bits (165), Expect = 3.730e-11 Identity = 40/122 (32.79%), Postives = 66/122 (54.10%), Query Frame = 1
Query: 55 PDHN---DEISAPLVFLCVGCRSVLGDTWAFVSSDAATKSVTLRGTP--CRVSPKCLFGFVHIKGENLPCLFTFLGRSERHHQGAGASATIGRTYISTPRHLDAMRDMFVFDTDAICSYELG 405
P HN EI+ PLVF C+ CR ++GD++AFV++D SV L P RV L+ +G ++ + + + G + T+G+ + +TPR LD +RD++ + D + Y+LG
Sbjct: 14 PQHNRVLQEITGPLVFQCLKCRLIVGDSFAFVTADRDLNSVVLYAKPHNIRVGTDLLWSR---EGIDIGSTYIMIYCN-------GCNLTLGKVWRTTPRKLDYIRDLYTLNLDCVMIYQLG 125
BLAST of mRNA_P-wetherbeei_contig1644.3.1 vs. uniprot
Match: A0A0D2WKG6_CAPO3 (Mis18 domain-containing protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WKG6_CAPO3) HSP 1 Score: 66.6 bits (161), Expect = 7.920e-11 Identity = 43/124 (34.68%), Postives = 61/124 (49.19%), Query Frame = 1
Query: 46 AASPDHNDEISAPLVFLCVGCRSVLGDTWAFVSSDAATKSVTLRGTPCRVSPKCLFGF---VHIKGENLPCLFTFLGRSERHHQGAGASATIGRTYISTPRHLDAMRDMFVFDTDAICSYELGR 408
AA N+E +VF C CRS+LGD+ A+V+ ++TL VSP L + G + C + L AG +A+IGR Y STPR D +RD + F D + SY +G+
Sbjct: 16 AADEAANEEEPIAVVFQCSECRSILGDSCAYVTPVDDLNAITLAA----VSPAVLIAKELQTSVSGVDTGCGYYTL-------TCAGCNASIGRMYCSTPRQFDIIRDHYTFHIDCLTSYTIGK 128
BLAST of mRNA_P-wetherbeei_contig1644.3.1 vs. uniprot
Match: A0A5D6YEM6_9STRA (Mis18 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YEM6_9STRA) HSP 1 Score: 68.6 bits (166), Expect = 8.800e-11 Identity = 45/120 (37.50%), Postives = 62/120 (51.67%), Query Frame = 1
Query: 70 EISAPLVFLCVGCRSVLGDTWAFVSSDAATKSVTLRGTPCRVSPKCLFGFVHIKGENLPCLFTFLGRSERHHQGAGASATIGRTYISTPRHLDAMRDMFVFDTDAICSYELGRCELLSEV 429
E+SAP+VF C CRSV GD++AFV S+A VTL V+ + G S + A +GR+Y++TP LDA+R +F F T AI SY+LG +L + V
Sbjct: 166 EVSAPVVFQCGTCRSVFGDSYAFVGSNAELLLVTLSA----VTNVTTGAEPQTSRDGADA-----GSSFQELLCAQCQTVLGRSYLTTPLALDALRGLFSFATTAIASYQLGYPQLQAAV 276
BLAST of mRNA_P-wetherbeei_contig1644.3.1 vs. uniprot
Match: UPI001B88B868 (protein Mis18-alpha-like n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88B868) HSP 1 Score: 63.2 bits (152), Expect = 1.510e-9 Identity = 38/124 (30.65%), Postives = 59/124 (47.58%), Query Frame = 1
Query: 55 PDHNDEIS--APLVFLCVGCRSVLGDTWAFVSSDAATKSVTLRGTPCRVSPKCLFGFVHIKGENLPCLFTF---LGRSERHHQGAGASATIGRTYISTPRHLDAMRDMFVFDTDAICSYELGRC 411
P N++ S AP VF C GC+++LGDT A+V ++ K++TL +V +K + C G S G TIG+ Y +T + LD++R F + SY++G C
Sbjct: 5 PGENEKSSDDAPFVFQCAGCKTILGDTTAWVCTNETLKTITLHSVSKQVK---------VKNDLFTCTSPSTVDFGSSYNDLMCCGCDTTIGKLYHTTNQKLDSVRGHFSLLLHKLISYQIGSC 119
BLAST of mRNA_P-wetherbeei_contig1644.3.1 vs. uniprot
Match: A0A077QUS9_9BASI (Protein mis18-alpha n=1 Tax=Melanopsichium pennsylvanicum 4 TaxID=1398559 RepID=A0A077QUS9_9BASI) HSP 1 Score: 64.7 bits (156), Expect = 2.380e-9 Identity = 41/118 (34.75%), Postives = 60/118 (50.85%), Query Frame = 1
Query: 82 PLVFLCVGCRSVLGDTWAFVSSDAATKSVTLRGTPCRVSPKCLFGFVHIKGENLPCLFTFLGRSERHHQGAGASATIGRTYISTPRHLDAMRDMFVFDTDAICSYELGRCELLSEVDD 435
PL+F C C +LGD+ +FV++D V L T +C+ P F +G + + + G + TIGR+Y +TPR LD +RD F + D I +Y+LG EVDD
Sbjct: 180 PLIFQCRQCHRLLGDSLSFVATDTELGYVILSNTT-----QCVVQDAAYSTSTDPS-FKDVGSTFNNLRCVGCNVTIGRSYRTTPRDLDDLRDFFSLEVDGIYTYQLGS-NWTREVDD 290 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1644.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1644.3.1 >prot_P-wetherbeei_contig1644.3.1 ID=prot_P-wetherbeei_contig1644.3.1|Name=mRNA_P-wetherbeei_contig1644.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=147bp MAAAGLWPSGAAGAFAASPDHNDEISAPLVFLCVGCRSVLGDTWAFVSSDback to top mRNA from alignment at P-wetherbeei_contig1644:4335..4963+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1644.3.1 ID=mRNA_P-wetherbeei_contig1644.3.1|Name=mRNA_P-wetherbeei_contig1644.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=629bp|location=Sequence derived from alignment at P-wetherbeei_contig1644:4335..4963+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1644:4335..4963+ >mRNA_P-wetherbeei_contig1644.3.1 ID=mRNA_P-wetherbeei_contig1644.3.1|Name=mRNA_P-wetherbeei_contig1644.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=441bp|location=Sequence derived from alignment at P-wetherbeei_contig1644:4335..4963+ (Phaeothamnion wetherbeei SAG_119_79)back to top |