mRNA_P-wetherbeei_contig164.9.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig164.9.1
Unique NamemRNA_P-wetherbeei_contig164.9.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig164.9.1 vs. uniprot
Match: A0A7S2V412_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V412_9STRA)

HSP 1 Score: 400 bits (1028), Expect = 2.330e-140
Identity = 186/223 (83.41%), Postives = 203/223 (91.03%), Query Frame = 1 
Query:    4 EHLKTAQQYFQLVGASASECDTIPGRQCMASCFFLLKQFEDVNIYLNSIKSYMYNEDDFNWNHGVSLAATGNYKAAEESLLLIASDKYKHEYCYISWLARCYIMNGNPRNAWELYLKMDTSNESFNLLQLIANDCYRMGHFLYAAKAFDVLERLDPDPEYWEGKRGACVGVFQQASHLSGVIAGKAKKEDLNDVLTMIRNTSNPQVEYMVRTIKKWCKDNRIS 672
            EHLK AQQ+FQLVGASASECDTIPGRQCMASCFFLL+QFEDVNIYLNS+K+YMYN+DDFNWNHG+SL+ TGNYK AE++LLLI ++KYK EY YISWLARCYIMNGNPRNAWELYLKMDTS+ESFNLLQLIANDCYRMGHFLYAAKAFDVLERLDPDPEYWEGKRGACVGVFQ       VIAGK  K+DL DVLTM+RNTSNPQVEY+ R I+KWCKDN + 
Sbjct:    1 EHLKMAQQFFQLVGASASECDTIPGRQCMASCFFLLRQFEDVNIYLNSVKAYMYNDDDFNWNHGLSLSCTGNYKGAEDALLLIQNEKYKQEYVYISWLARCYIMNGNPRNAWELYLKMDTSSESFNLLQLIANDCYRMGHFLYAAKAFDVLERLDPDPEYWEGKRGACVGVFQM------VIAGKQNKDDLRDVLTMLRNTSNPQVEYITRIIRKWCKDNGVK 217
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BLAST of mRNA_P-wetherbeei_contig164.9.1 vs. uniprot
Match: A0A836CHL9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHL9_9STRA)

HSP 1 Score: 407 bits (1047), Expect = 3.090e-138
Identity = 193/225 (85.78%), Postives = 206/225 (91.56%), Query Frame = 1 
Query:    1 REHLKTAQQYFQLVGASASECDTIPGRQCMASCFFLLKQFEDVNIYLNSIKSYMYNEDDFNWNHGVSLAATGNYKAAEESLLLIASDKYKHEYCYISWLARCYIMNGNPRNAWELYLKMDTSNESFNLLQLIANDCYRMGHFLYAAKAFDVLERLDPDPEYWEGKRGACVGVFQQASHLSGVIAGKAKKEDLNDVLTMIRNTSNPQVEYMVRTIKKWCKDNRISI 675
            REHLK AQQYFQLVGASASECDTIPGRQCMASCFFLLKQFEDVNIYLNS+K+YMYN+DDFNWNHG+SLA+TGNYKAAEESLLLI S++YK +Y +ISWLARCY+MNGNPRNAWELYLKM+TSNESFNLLQLIANDCYRMGHFLYAAKAFDVLERLDP+PEYWEGKRGACVGVFQ       VIAGKA KEDL D L M+RNTSNPQVEYMVR IKKW KDN I I
Sbjct:  340 REHLKMAQQYFQLVGASASECDTIPGRQCMASCFFLLKQFEDVNIYLNSVKAYMYNDDDFNWNHGLSLASTGNYKAAEESLLLIQSERYKQDYVFISWLARCYMMNGNPRNAWELYLKMETSNESFNLLQLIANDCYRMGHFLYAAKAFDVLERLDPEPEYWEGKRGACVGVFQL------VIAGKASKEDLRDALAMVRNTSNPQVEYMVRVIKKWAKDNGIKI 558
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BLAST of mRNA_P-wetherbeei_contig164.9.1 vs. uniprot
Match: D8LBC6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBC6_ECTSI)

HSP 1 Score: 405 bits (1040), Expect = 2.220e-137
Identity = 189/225 (84.00%), Postives = 208/225 (92.44%), Query Frame = 1 
Query:    1 REHLKTAQQYFQLVGASASECDTIPGRQCMASCFFLLKQFEDVNIYLNSIKSYMYNEDDFNWNHGVSLAATGNYKAAEESLLLIASDKYKHEYCYISWLARCYIMNGNPRNAWELYLKMDTSNESFNLLQLIANDCYRMGHFLYAAKAFDVLERLDPDPEYWEGKRGACVGVFQQASHLSGVIAGKAKKEDLNDVLTMIRNTSNPQVEYMVRTIKKWCKDNRISI 675
            REHLK AQQYFQLVGASASECDTIPGRQCMASCFFLLKQFEDVNIYLNS+K+YMYN+DDFNWNHG+SL +TGN+KA+EE+LLLIA++K K EYCYISWL RCYIMNGNPR+AW+LYLKMDTSNESFNLLQLIANDCYRMGHFLYAAKAFDVLERLDPDPEYWEGKRGACVGVFQQ      VIAGKAKK+DL DVL M+RNT+NPQVEYMVR +KKW ++N + I
Sbjct:  326 REHLKMAQQYFQLVGASASECDTIPGRQCMASCFFLLKQFEDVNIYLNSVKAYMYNDDDFNWNHGLSLGSTGNFKASEEALLLIANEKMKQEYCYISWLTRCYIMNGNPRSAWDLYLKMDTSNESFNLLQLIANDCYRMGHFLYAAKAFDVLERLDPDPEYWEGKRGACVGVFQQ------VIAGKAKKDDLRDVLAMVRNTNNPQVEYMVRCMKKWGQENDVKI 544
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BLAST of mRNA_P-wetherbeei_contig164.9.1 vs. uniprot
Match: A0A7S2GLE2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GLE2_9STRA)

HSP 1 Score: 394 bits (1012), Expect = 4.020e-132
Identity = 185/224 (82.59%), Postives = 200/224 (89.29%), Query Frame = 1 
Query:    1 REHLKTAQQYFQLVGASASECDTIPGRQCMASCFFLLKQFEDVNIYLNSIKSYMYNEDDFNWNHGVSLAATGNYKAAEESLLLIASDKYKHEYCYISWLARCYIMNGNPRNAWELYLKMDTSNESFNLLQLIANDCYRMGHFLYAAKAFDVLERLDPDPEYWEGKRGACVGVFQQASHLSGVIAGKAKKEDLNDVLTMIRNTSNPQVEYMVRTIKKWCKDNRIS 672
            REH+K AQQ+FQLVGASA+ECDTIPGRQCMASCFFLL QFEDVNIYLNSIK+YMYN+DDFNWN+G+SLA TGN+KAAEE+LLLI ++KYK E C+ISWLARCYI NGNPRNAWELYLKMDTSNESFNLLQLIANDCYRMG F YAAKAFDVLERLDPDPEYW+GKRGACVGVFQQ      V+AGK K EDL  VL MIR  SNPQVEYMVRTIKKWCKDN + 
Sbjct:  401 REHIKMAQQFFQLVGASAAECDTIPGRQCMASCFFLLNQFEDVNIYLNSIKAYMYNDDDFNWNYGISLAQTGNFKAAEEALLLIQNEKYKAEPCFISWLARCYISNGNPRNAWELYLKMDTSNESFNLLQLIANDCYRMGQFFYAAKAFDVLERLDPDPEYWDGKRGACVGVFQQ------VVAGKGKHEDLRSVLNMIRGASNPQVEYMVRTIKKWCKDNNVK 618
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BLAST of mRNA_P-wetherbeei_contig164.9.1 vs. uniprot
Match: A0A7S4E7C5_9STRA (Hypothetical protein n=3 Tax=Pelagomonadales TaxID=54409 RepID=A0A7S4E7C5_9STRA)

HSP 1 Score: 393 bits (1009), Expect = 1.620e-131
Identity = 182/225 (80.89%), Postives = 200/225 (88.89%), Query Frame = 1 
Query:    1 REHLKTAQQYFQLVGASASECDTIPGRQCMASCFFLLKQFEDVNIYLNSIKSYMYNEDDFNWNHGVSLAATGNYKAAEESLLLIASDKYKHEYCYISWLARCYIMNGNPRNAWELYLKMDTSNESFNLLQLIANDCYRMGHFLYAAKAFDVLERLDPDPEYWEGKRGACVGVFQQASHLSGVIAGKAKKEDLNDVLTMIRNTSNPQVEYMVRTIKKWCKDNRISI 675
            REH+K AQQ+FQLVGASASECDTIPGRQCMASCFFLLKQFEDVNIYLNSIK+YMY +DDFNWNHG+SLA TGNYK AEE+LLL+ +++YK EYCY+SWLARC++MNG P+NAWELYLKMDTSNESFNLLQLIANDCYRMG FLYAAKAFDVLERLDPDPE+WEGKRGACVGVFQQ      V+AGK  KEDL DVL M+RNTSNPQVEYMVR I KW   N + I
Sbjct:  415 REHVKMAQQFFQLVGASASECDTIPGRQCMASCFFLLKQFEDVNIYLNSIKAYMYGDDDFNWNHGISLAQTGNYKGAEEALLLVQNERYKAEYCYVSWLARCFVMNGQPKNAWELYLKMDTSNESFNLLQLIANDCYRMGQFLYAAKAFDVLERLDPDPEFWEGKRGACVGVFQQ------VVAGKGAKEDLRDVLAMVRNTSNPQVEYMVRIISKWAASNGVKI 633
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BLAST of mRNA_P-wetherbeei_contig164.9.1 vs. uniprot
Match: A0A7S2RXW2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RXW2_9STRA)

HSP 1 Score: 391 bits (1005), Expect = 2.410e-130
Identity = 183/225 (81.33%), Postives = 203/225 (90.22%), Query Frame = 1 
Query:    1 REHLKTAQQYFQLVGASASECDTIPGRQCMASCFFLLKQFEDVNIYLNSIKSYMYNEDDFNWNHGVSLAATGNYKAAEESLLLIASDKYKHEYCYISWLARCYIMNGNPRNAWELYLKMDTSNESFNLLQLIANDCYRMGHFLYAAKAFDVLERLDPDPEYWEGKRGACVGVFQQASHLSGVIAGKAKKEDLNDVLTMIRNTSNPQVEYMVRTIKKWCKDNRISI 675
            REH+K AQQ+FQLVG+SASECDTIPGRQCMAS FFLLKQFEDVNIYLNSIK+YMYN+DDFNWNHG+S A TGN+KAAEE+LLL+ ++KYK EYCYISWLARCYI NG PRNAWELYLKMDTSNESFNLLQLIANDCYRMGHFLYAAKAFDVLERLDPDPEYWEGKRGA VGVFQQ      VIA KA  +DL DVL M++NTSNPQVEYM+R I++WC+ NRI++
Sbjct:  462 REHIKMAQQFFQLVGSSASECDTIPGRQCMASMFFLLKQFEDVNIYLNSIKAYMYNDDDFNWNHGISQAQTGNFKAAEEALLLVQNEKYKAEYCYISWLARCYIHNGQPRNAWELYLKMDTSNESFNLLQLIANDCYRMGHFLYAAKAFDVLERLDPDPEYWEGKRGAVVGVFQQ------VIASKATADDLRDVLAMVQNTSNPQVEYMLRIIRRWCEQNRITV 680
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BLAST of mRNA_P-wetherbeei_contig164.9.1 vs. uniprot
Match: A0A7S0SX03_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SX03_9STRA)

HSP 1 Score: 373 bits (958), Expect = 1.420e-128
Identity = 174/225 (77.33%), Postives = 200/225 (88.89%), Query Frame = 1 
Query:    1 REHLKTAQQYFQLVGASASECDTIPGRQCMASCFFLLKQFEDVNIYLNSIKSYMYNEDDFNWNHGVSLAATGNYKAAEESLLLIASDKYKHEYCYISWLARCYIMNGNPRNAWELYLKMDTSNESFNLLQLIANDCYRMGHFLYAAKAFDVLERLDPDPEYWEGKRGACVGVFQQASHLSGVIAGKAKKEDLNDVLTMIRNTSNPQVEYMVRTIKKWCKDNRISI 675
            REHLK AQQ FQ VG SA +CDTIPGRQCMASCFFL++QFEDVNIYL+S+K+YMYN+DDFN+N+G+SLAAT NYK+AEE+LLL+ +DKYK EY YISWL RCYIMNGNPR+AWELYLK+++SNESFNLLQLIANDC++MGHFLY+AKAFDVLERLD DPEYWEGKRGACVGVFQ       VIA +A KEDL DVL MIR+TSNPQVEY+VR IKKWCK+N + I
Sbjct:   72 REHLKIAQQCFQSVGTSAHDCDTIPGRQCMASCFFLMRQFEDVNIYLSSVKAYMYNDDDFNYNYGISLAATRNYKSAEEALLLVHNDKYKLEYVYISWLTRCYIMNGNPRSAWELYLKLNSSNESFNLLQLIANDCFKMGHFLYSAKAFDVLERLDADPEYWEGKRGACVGVFQM------VIANRASKEDLQDVLNMIRSTSNPQVEYIVRIIKKWCKENNVKI 290
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BLAST of mRNA_P-wetherbeei_contig164.9.1 vs. uniprot
Match: A0A7S3H7X6_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H7X6_9STRA)

HSP 1 Score: 378 bits (971), Expect = 2.980e-128
Identity = 177/225 (78.67%), Postives = 202/225 (89.78%), Query Frame = 1 
Query:    1 REHLKTAQQYFQLVGASASECDTIPGRQCMASCFFLLKQFEDVNIYLNSIKSYMYNEDDFNWNHGVSLAATGNYKAAEESLLLIASDKYKHEYCYISWLARCYIMNGNPRNAWELYLKMDTSNESFNLLQLIANDCYRMGHFLYAAKAFDVLERLDPDPEYWEGKRGACVGVFQQASHLSGVIAGKAKKEDLNDVLTMIRNTSNPQVEYMVRTIKKWCKDNRISI 675
            REHLK AQQ FQLVG SA ECDTIPGRQCMASC+FL+KQFEDVNIYLNS+K+YMYN+DDFN+NHG++LAAT NYK+AEE+LLLI ++ YK EY YISWLARCY+MNGNPR+AWELYLKM +S+ESF+LLQLIAND YRMGHFL+AAKAFDVLERLDPDPEYWEGKRGACVGVFQ       VIAGKA ++DL DVL+MIRNTSNPQVEY+VR IKKWCK+N + +
Sbjct:  229 REHLKMAQQCFQLVGTSAHECDTIPGRQCMASCYFLMKQFEDVNIYLNSVKAYMYNDDDFNYNHGIALAATRNYKSAEEALLLIHNEAYKAEYVYISWLARCYVMNGNPRSAWELYLKMTSSSESFHLLQLIANDSYRMGHFLFAAKAFDVLERLDPDPEYWEGKRGACVGVFQL------VIAGKANRDDLQDVLSMIRNTSNPQVEYIVRIIKKWCKENNVKV 447
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BLAST of mRNA_P-wetherbeei_contig164.9.1 vs. uniprot
Match: A0A812VCC2_SYMMI (TTC26 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812VCC2_SYMMI)

HSP 1 Score: 381 bits (978), Expect = 6.180e-128
Identity = 178/225 (79.11%), Postives = 200/225 (88.89%), Query Frame = 1 
Query:    1 REHLKTAQQYFQLVGASASECDTIPGRQCMASCFFLLKQFEDVNIYLNSIKSYMYNEDDFNWNHGVSLAATGNYKAAEESLLLIASDKYKHEYCYISWLARCYIMNGNPRNAWELYLKMDTSNESFNLLQLIANDCYRMGHFLYAAKAFDVLERLDPDPEYWEGKRGACVGVFQQASHLSGVIAGKAKKEDLNDVLTMIRNTSNPQVEYMVRTIKKWCKDNRISI 675
            REHLK AQQ FQLVG SA ECDTIPGRQCMASCFFL+KQF+DV+IYLNSIK+YMYN+DDFNWN+ + LA+T NYK AEE+LLLI ++KYK EY Y+SWLARCYIMN NPR+AWELYLKM++SNESFNLLQLIANDCYRMGHFLY+AKAFDVLERLDPDPEYWEGKRGACVGVFQ       +IAGK  +E+L DVLTM+RNTSNPQVEY+VR IKKWCKDN I +
Sbjct:  330 REHLKVAQQCFQLVGTSAHECDTIPGRQCMASCFFLMKQFDDVSIYLNSIKAYMYNDDDFNWNYALCLASTRNYKGAEEALLLIHNEKYKSEYVYVSWLARCYIMNNNPRSAWELYLKMNSSNESFNLLQLIANDCYRMGHFLYSAKAFDVLERLDPDPEYWEGKRGACVGVFQL------MIAGKESRENLQDVLTMVRNTSNPQVEYLVRIIKKWCKDNNIKM 548
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BLAST of mRNA_P-wetherbeei_contig164.9.1 vs. uniprot
Match: A0A7S3NP57_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NP57_9STRA)

HSP 1 Score: 380 bits (977), Expect = 1.470e-126
Identity = 176/225 (78.22%), Postives = 201/225 (89.33%), Query Frame = 1 
Query:    1 REHLKTAQQYFQLVGASASECDTIPGRQCMASCFFLLKQFEDVNIYLNSIKSYMYNEDDFNWNHGVSLAATGNYKAAEESLLLIASDKYKHEYCYISWLARCYIMNGNPRNAWELYLKMDTSNESFNLLQLIANDCYRMGHFLYAAKAFDVLERLDPDPEYWEGKRGACVGVFQQASHLSGVIAGKAKKEDLNDVLTMIRNTSNPQVEYMVRTIKKWCKDNRISI 675
            R+H+K AQQ+FQLVG+SASECDTIPGRQCMASCFFLLKQFEDVNIYLNS+K+YMYN+DDFNWN+G+SLA TGNYKAAEE+ LL+ ++ YK++YCYISWLARC+IMNG P+ AWELYLKMDTSNESFNLLQLIANDCYRMG FL +AKAFDVLERLDPDPE+WEGKRGACVGVFQQ      VIAGKA K+DL DVLT++R+TSNPQVEYMVR I KW   N + +
Sbjct:  427 RDHVKMAQQFFQLVGSSASECDTIPGRQCMASCFFLLKQFEDVNIYLNSVKAYMYNDDDFNWNYGISLAQTGNYKAAEEAFLLVQNETYKNDYCYISWLARCHIMNGQPKLAWELYLKMDTSNESFNLLQLIANDCYRMGFFLISAKAFDVLERLDPDPEFWEGKRGACVGVFQQ------VIAGKAPKDDLRDVLTLVRSTSNPQVEYMVRIISKWASSNGVKL 645
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig164.9.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2V412_9STRA2.330e-14083.41Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A836CHL9_9STRA3.090e-13885.78Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LBC6_ECTSI2.220e-13784.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2GLE2_9STRA4.020e-13282.59Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S4E7C5_9STRA1.620e-13180.89Hypothetical protein n=3 Tax=Pelagomonadales TaxID... [more]
A0A7S2RXW2_9STRA2.410e-13081.33Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S0SX03_9STRA1.420e-12877.33Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
A0A7S3H7X6_9STRA2.980e-12878.67Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A812VCC2_SYMMI6.180e-12879.11TTC26 protein n=1 Tax=Symbiodinium microadriaticum... [more]
A0A7S3NP57_9STRA1.470e-12678.22Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig164contigP-wetherbeei_contig164:10504..12940 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D8LBC6
Preferred nameTTC26
PFAMsANAPC3,TPR_19,TPR_8
Model size678
Max annot lvl2759|Eukaryota
KEGG koko:K19685
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000902,GO:0000904,GO:0001655,GO:0001822,GO:0002009,GO:0003006,GO:0005575,GO:0005622,GO:0005623,GO:0005813,GO:0005815,GO:0005856,GO:0005929,GO:0006810,GO:0006928,GO:0006996,GO:0007017,GO:0007018,GO:0007154,GO:0007165,GO:0007166,GO:0007224,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007286,GO:0007399,GO:0008150,GO:0008594,GO:0009653,GO:0009887,GO:0009888,GO:0009987,GO:0010970,GO:0015630,GO:0016043,GO:0019953,GO:0022008,GO:0022412,GO:0022414,GO:0022607,GO:0023052,GO:0030030,GO:0030031,GO:0030154,GO:0030182,GO:0030705,GO:0030990,GO:0030992,GO:0031503,GO:0031514,GO:0032501,GO:0032502,GO:0032504,GO:0032989,GO:0032991,GO:0035239,GO:0035295,GO:0035720,GO:0035735,GO:0035845,GO:0036064,GO:0039022,GO:0039023,GO:0042073,GO:0042461,GO:0042995,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044085,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044446,GO:0044463,GO:0044464,GO:0044703,GO:0044782,GO:0046530,GO:0046907,GO:0048232,GO:0048468,GO:0048513,GO:0048515,GO:0048609,GO:0048666,GO:0048667,GO:0048699,GO:0048729,GO:0048731,GO:0048793,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0051704,GO:0051716,GO:0060271,GO:0060429,GO:0060562,GO:0060993,GO:0065007,GO:0070925,GO:0071840,GO:0072001,GO:0072073,GO:0072114,GO:0072176,GO:0072178,GO:0097542,GO:0099111,GO:0120025,GO:0120031,GO:0120036,GO:0120038
Exons6
Evalue3.64e-138
EggNOG OGsKOG3785@1|root,KOG3785@2759|Eukaryota
Descriptionintraciliary transport
Cds size678
COG categoryS
BRITEko00000,ko03036
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig164.9.1prot_P-wetherbeei_contig164.9.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig164 10504..12940 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186086.0135365-CDS-P-wetherbeei_contig164:10503..106381683186086.0135365-CDS-P-wetherbeei_contig164:10503..10638Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig164 10504..10638 -
1683186086.0258787-CDS-P-wetherbeei_contig164:10990..111191683186086.0258787-CDS-P-wetherbeei_contig164:10990..11119Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig164 10991..11119 -
1683186086.0352309-CDS-P-wetherbeei_contig164:11519..117081683186086.0352309-CDS-P-wetherbeei_contig164:11519..11708Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig164 11520..11708 -
1683186086.045002-CDS-P-wetherbeei_contig164:12122..121941683186086.045002-CDS-P-wetherbeei_contig164:12122..12194Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig164 12123..12194 -
1683186086.0566258-CDS-P-wetherbeei_contig164:12528..126451683186086.0566258-CDS-P-wetherbeei_contig164:12528..12645Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig164 12529..12645 -
1683186086.0645463-CDS-P-wetherbeei_contig164:12904..129401683186086.0645463-CDS-P-wetherbeei_contig164:12904..12940Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig164 12905..12940 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig164.9.1

>prot_P-wetherbeei_contig164.9.1 ID=prot_P-wetherbeei_contig164.9.1|Name=mRNA_P-wetherbeei_contig164.9.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=226bp
REHLKTAQQYFQLVGASASECDTIPGRQCMASCFFLLKQFEDVNIYLNSI
KSYMYNEDDFNWNHGVSLAATGNYKAAEESLLLIASDKYKHEYCYISWLA
RCYIMNGNPRNAWELYLKMDTSNESFNLLQLIANDCYRMGHFLYAAKAFD
VLERLDPDPEYWEGKRGACVGVFQQASHLSGVIAGKAKKEDLNDVLTMIR
NTSNPQVEYMVRTIKKWCKDNRISI*
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mRNA from alignment at P-wetherbeei_contig164:10504..12940-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig164.9.1 ID=mRNA_P-wetherbeei_contig164.9.1|Name=mRNA_P-wetherbeei_contig164.9.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2437bp|location=Sequence derived from alignment at P-wetherbeei_contig164:10504..12940- (Phaeothamnion wetherbeei SAG_119_79)
AGAGAACACCTTAAGACGGCGCAGCAGTATTTTCAGGTTTGTGTTCGTGT
GCGCGGCCTGTAAGTGCCGGCGAACCTGCTTAATCACGCCTGCGGGTTTC
CTCATGTCTTAATTGGCATGCTGGCCTATGGTTGCACTGACGCAGCTTTT
TTACTGTTCTGGCTATGCGTCGGACTCTAAATGAAAGAGCAGCGGATTTC
TGCCGTTCCCTTCAATGCTTTACGAGCTATTATCTCTTCTGTTTCTGAAA
CTCTCCTGTTTCTGAAACTCTCCTTCTGGCTGCCGCCATTTGCAGCTGGT
CGGAGCTTCGGCGAGCGAGTGCGACACGATCCCGGGGAGACAATGCATGG
CCTCATGCTTCTTTCTCCTGAAGCAGTTTGAGGACGTCAACATTTACTTG
AACTCGATTAAGGTGCGTTGTAAGCTTAAAGCAGAGGACGCGATGGGCGC
TCAAGATGTATGCGTATTGTTCAGCGGAAGCGCTGTGAGTTGCATTGGTT
TGGTTATGATGCCGGGTCCATGTTCATTGAGCACATTTTTCGTTTGCTGC
AGGAGCATGGGACGAAGGGGGGAGTGACTTGAAATCCCACTGCCGCCTAT
GTTTTATCCTTAGTCCCCGCTGGCTGCGCGTCGCCTCCGCCAGTTTTGCC
ACCATCCCTGGCGCTGGCTGCCCGCGTGCTCACCGCGAAAACCCGCCAGC
TTGCTACCATCGGTCACCTTTTTGTGCCCGCCTGCTTGTGCCGCAGTCGT
ACATGTACAACGAAGATGACTTCAACTGGAACCACGGCGTCTCCTTGGCC
GCAACGGGGAACTACAAGGTGCGCGGTGGCAGAGGATTTCCTTCACCTCT
CTTTCTGGCGTTTCGGTGATCTTTTTGATTGAACGATTTCTGGTTTTTAA
TTTTGAAGAGAAGCGTCTTGTCGGCTGTACCGGCCGCGACAGCTTTCAAT
AAATAGCCTACGCAACTGGCGCCAGCAGCTATGTGTCCGCCGGCTTGAAT
GTCAAGAACCGCTGTAAACCTGCTGCTCATTACCTCCCTCACTTCGCTTT
GCCCGCCCCCCTTGTCCTCTCTTGCCTTTCCCGCATTGCGGCCGCAATAC
TACACTGCACGGCGGCCCAACGTTGTGCACACATGCCTGTTTTTAATGTG
GGCCGGGCGAACACTGCATTGCGATGCGCGATGCCTCCATGGCGATGTTG
GGACACTGCACTCAATGTGCCAAGCCAAACAGGCAGCGGAGGAGTCGCTG
CTGCTGATCGCGAGCGACAAGTACAAGCACGAGTACTGCTACATCAGCTG
GCTGGCGCGGTGCTACATCATGAACGGAAACCCGCGAAACGCGTGGGAGC
TCTACCTCAAGATGGACACTTCCAACGAGTCATTCAACCTCCTCCAGCTC
ATCGCCAACGACTGCTACCGGGTACGTACAGTCTCTTTCTTTCTGCCTAG
ACAAAGTCCTATTTCCGTGCTCCAGTTTCTGCAGTGGCTTCAGTTCTTTA
GTTTGTTTAGTCCTTCTGTTTGGTGAGCCAGGCAGACAGTTTTTCGGTAC
GTTATGGCTGGCTTAATTTGAAGAAAATAAGAAGCGGCGTATAGAACGCG
GCGGCACCGACGGTAGCTTATGTTTACGGCGCGCTTCGGGCTCAGTCAAG
CATGTTTGCTGTGGTTTCAGCGATTCTCTGACACGTGCTTGCATGTGTGC
GCATCGATGTATTTGCTCTGTCAGGCTTATTGCCGCACTGCTTACTTCTC
ACACGTCAGCCGCCCTTAACTGCGGCAACCGAAACCGAAACGTTCCAACC
TTGGTTCTGCACCTGTGGCAGATGGGGCACTTCCTGTATGCAGCGAAGGC
GTTCGACGTGCTCGAGCGGCTCGACCCTGACCCCGAATACTGGGAGGGCA
AGCGGGGCGCCTGCGTCGGCGTTTTCCAGCAGGCAAGCCACCTGTCAGGC
GTCGAAGGCGCTTGTTTCGTTCATTGTACACTGCTCCGTTTTCAGGCTCC
TTTTTGAAGATTTGCAGCCTTCAGAGGGATTTCTGTGTGTTGACCGTCAC
AGACGTCCGACGCGTAAAAGAATTGAACGAAGAATGAAGGAACTGAGCAA
GCATGCACACGGAAGTCACGATGCCCGCTTTCTTTGCCTTGTGACTTGAC
CGCATGCATGACTCGCTCGCGTCGTTGAATCTCTGGGTGGTATTGTTCTA
TTCATTACGGTGCGTCCTAATGGCGCTAACCTCTTTTATTGCTCCCCTTT
TCCTTTGTGTCAACTTTTGGTTGCCCGGTTGTGGTGTGGCATGGTTGCAC
AGGTGATTGCAGGCAAGGCCAAGAAAGAGGACCTAAACGACGTGCTGACG
ATGATCCGCAACACCAGCAACCCCCAGGTCGAGTACATGGTGCGCACCAT
CAAGAAGTGGTGCAAGGACAACCGCATCTCCATCTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig164:10504..12940-

>mRNA_P-wetherbeei_contig164.9.1 ID=mRNA_P-wetherbeei_contig164.9.1|Name=mRNA_P-wetherbeei_contig164.9.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=678bp|location=Sequence derived from alignment at P-wetherbeei_contig164:10504..12940- (Phaeothamnion wetherbeei SAG_119_79)
AGAGAACACCTTAAGACGGCGCAGCAGTATTTTCAGCTGGTCGGAGCTTC
GGCGAGCGAGTGCGACACGATCCCGGGGAGACAATGCATGGCCTCATGCT
TCTTTCTCCTGAAGCAGTTTGAGGACGTCAACATTTACTTGAACTCGATT
AAGTCGTACATGTACAACGAAGATGACTTCAACTGGAACCACGGCGTCTC
CTTGGCCGCAACGGGGAACTACAAGGCAGCGGAGGAGTCGCTGCTGCTGA
TCGCGAGCGACAAGTACAAGCACGAGTACTGCTACATCAGCTGGCTGGCG
CGGTGCTACATCATGAACGGAAACCCGCGAAACGCGTGGGAGCTCTACCT
CAAGATGGACACTTCCAACGAGTCATTCAACCTCCTCCAGCTCATCGCCA
ACGACTGCTACCGGATGGGGCACTTCCTGTATGCAGCGAAGGCGTTCGAC
GTGCTCGAGCGGCTCGACCCTGACCCCGAATACTGGGAGGGCAAGCGGGG
CGCCTGCGTCGGCGTTTTCCAGCAGGCAAGCCACCTGTCAGGCGTGATTG
CAGGCAAGGCCAAGAAAGAGGACCTAAACGACGTGCTGACGATGATCCGC
AACACCAGCAACCCCCAGGTCGAGTACATGGTGCGCACCATCAAGAAGTG
GTGCAAGGACAACCGCATCTCCATCTGA
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