mRNA_P-wetherbeei_contig16367.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig16367.1.1
Unique NamemRNA_P-wetherbeei_contig16367.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig16367.1.1 vs. uniprot
Match: A0A5C5ZVJ0_9BACT (Uncharacterized protein n=1 Tax=Rhodopirellula pilleata TaxID=2714738 RepID=A0A5C5ZVJ0_9BACT)

HSP 1 Score: 87.4 bits (215), Expect = 2.120e-15
Identity = 106/360 (29.44%), Postives = 154/360 (42.78%), Query Frame = 1
Query:   34 SDLSELALCTLHRNGYVREAALRILAFEQDGRWLAPCFLRLSDWVPSIRELARARVLNYCRPEFRRHWSDHAHLVVEVLQRPRTQMGAPWAQPVLDFLLEDLQPFLELHPSHRASVRS----------------LLKRLGDRVP--LDLMLASSDFMLRRMALVRSSP--------EQRAQMRSDPSSAVRAEV----------ISPQDFRWGLLDRSERVRSRASHALKQAGEDPRRFYLDHLES--HSAIALRGLREWGTREDTAAIRPFLKNPHAGLRRAAVRALARSDAKSLPG--EQLLKDPAPGVVR---EYLKVA--DLSTEKLREL---SRQPELRKVCLQSLLGRGRWEAL 969
            SD++  +L +LH+NGYVR+ A+R L+    G  +    LR +DWV SI E A++ + +    +    +   + L++ +L+  R  +            +  L   L + P HR  V                  LL R GD +   +   ++S D ++R   L R+S         E   +  SD    VR E           +S   ++ GL D+S  +R  A   LK+ G D    Y  HL    +S  AL GL E G  +D A     L +P+A  R  AVR L R D KS  G  +Q L D +  VVR   + L      L+ E L  L    +    +K  L  LLG GRW AL
Sbjct:  118 SDIAVGSLLSLHKNGYVRQIAVRFLSDVDSGEEIRFLLLRQNDWVDSISETAQSAICDRLTGDNLVSFVSESDLLMHLLECKRRDLSK----------IVSLYIDLLIAPQHREHVNEAVNSCGKQTGRKLIGLLLCRDGDHLADVVQFGVSSHDGVVRSKCLRRASDCLPADVCTEIAERFLSDKFIPVRLEAYELSAASSPAMSTGIWKRGLFDKSRSLRETAMFYLKKDGCDVASIYRKHLSRFPNSLPALSGLVESGDEKDIALFFQCLASPYASRRAEAVRGLGRFDRKSDVGRIQQSLLDESARVVRAAHQQLSTTRNQLNPEHLFGLIDDCKNLAGKKAILHLLLGLGRWPAL 467          
BLAST of mRNA_P-wetherbeei_contig16367.1.1 vs. uniprot
Match: A0A3M8B771_9BACL (HEAT repeat domain-containing protein n=2 Tax=Brevibacillus TaxID=55080 RepID=A0A3M8B771_9BACL)

HSP 1 Score: 84.3 bits (207), Expect = 2.300e-14
Identity = 76/281 (27.05%), Postives = 127/281 (45.20%), Query Frame = 1
Query:   34 SDLSELALCTLHRNGYVREAALRILAFEQDGRWLAPCFLRLSDWVPSIRELARARVLNYCRPEFRRHWSDHAHLVVEVLQRPRTQMGAPWAQPVLDFLL--EDLQPFLELHPSHRASVRSLLKRLGDRVP-------LDLMLASSDFMLRRMA---LVRSSPEQ-----RAQMRSDPSSAVRAEVI----------SPQDFRWGLLDRSERVRSRASHALKQAGEDPRRFYLDHLESHSA----IALRGLREWGTREDTAAIRPFLKNPHAGLRRAAVRAL 783
            SD+S + +C+ HRNGYVREAA+ +LA +  G+ +    LR++DW+P IR +A   +    RP++ +H+ +  +LV  + +    +  + +   +       E+ +  L    S    VR     L   +P       +   L  SD  +R      + R+   +       ++RSD    +R   +          S ++    LLDR + +R  A + LK    D   FY + L   +      A+ G+ E G + D   I PFL + +A  RRAAV+AL
Sbjct:  121 SDVSFIGICSFHRNGYVREAAVEMLAHQFSGKEIPFLLLRMNDWLPKIRFMAFKALKQRIRPDYVKHFLEAIYLVKHLSEYYNREKFSDFVDEIYGLFRHPENRKVLLSGFHSKAPIVRRFCFELAINLPDIEQESVISEALRQSDAWIRLQVAKHICRNYSNECLIQWLKRIRSDVFPPIRQLALQTYMEHFSEQSTKELLAALLDRHKTIREMARYYLKDKRIDFSSFYREKLNGTNERLIQAAIAGVGETGDKTDAQWIVPFLCHENARTRRAAVKAL 401          
BLAST of mRNA_P-wetherbeei_contig16367.1.1 vs. uniprot
Match: A0A7Z7CGR0_9BACL (HEAT repeat n=4 Tax=Paenibacillus TaxID=44249 RepID=A0A7Z7CGR0_9BACL)

HSP 1 Score: 82.4 bits (202), Expect = 9.870e-14
Identity = 84/311 (27.01%), Postives = 147/311 (47.27%), Query Frame = 1
Query:   34 SDLSELALCTLHRNGYVREAALRILAFEQDGRWLAP-CFLRLSDWVPSIRELARARVLNYCRPEFRRHWSDHAHLVVEVLQRPRTQMGAPWAQPVLDFLLEDLQPFLELHPSHRASVRSLLKRLGDRVPLD-----------LMLASSDFMLRRMALVR--------SSPEQRAQMRSDPSSAVRAEVIS------PQDFRW----GLLDRSERVRSRASHALKQAGEDP-RRFYLDHLES----HSAIALRGLREWGTREDTAAIRPFLKNPHAGLRRAAVRALARSDAKSLPGE--QLLKDPAPGVVRE 855
            +  + L++ T+H +GY+REAA+R +  E D  +  P   LRL+DWVP IR+LA+  +    +PE+ + W ++  ++VE L+     +   W + + + L +    ++ +H S R S  + ++RL  R+ ++             L   D  +RR A  +        +  E   +M+ D   ++R E ++      P+D +      LLD    VR  A    KQ  +     +YLD + S    H A A+ GL E G + D   +  + ++    +R+A +R L R +  S       +L+DP PG+ RE
Sbjct:  104 ASATRLSVLTMHWSGYIREAAVRKM-IENDQPYTFPYLLLRLNDWVPEIRDLAKLALERKRKPEYAKLWMENI-ILVERLRICGRDLFEEWIESIHNLLRQKECRYV-IH-SARVSPDAYIRRLAFRISIEENGTDNGMIIEQALRDDDPSIRRWAAWQVDGILSGQNLKEALLRMQQDSIPSIRRESLASLATMFPEDAKEIIADRLLDPDLSVRDTARRHGKQWMKGSYAEWYLDMIWSEERGHLAAAIAGLGETGEKADAEVVFDYAQHSVVAVRKAVIRGLTRLNPSSYGPYFINMLQDPQPGISRE 410          
BLAST of mRNA_P-wetherbeei_contig16367.1.1 vs. uniprot
Match: A0A8F9YHS4_9PSEU (Uncharacterized protein n=1 Tax=Amycolatopsis sp. DSM 110486 TaxID=2865832 RepID=A0A8F9YHS4_9PSEU)

HSP 1 Score: 80.5 bits (197), Expect = 2.520e-13
Identity = 90/303 (29.70%), Postives = 136/303 (44.88%), Query Frame = 1
Query:   46 ELALCTLHRNGYVREAALRILAFEQDGRWLAPCFLRLSDWVPSIRELARARVLNYCRPEFRRHWSDHAHLVVEVLQRPRTQMGAPWA-----QPVL------DFLLEDLQPFLELHPS-HRASVRSLLKRLGDRVPLDLMLASSDFMLR----RMALVRSSPEQRAQMRSDPSSAVRA---EVISPQDFRWGLLDRSERVRSRASHALKQAGEDPRRFYLDHLESHSAI--ALRGLREWGTREDTAAIRPFLKNPHAGLRRAAVRALAR-----SDAKSLP-GEQLLKDPAPGVVREYLKVAD 873
            +LA    H  GY+RE  +R L   +D   L    +R  DWVP +RE+ARA VL       R   +D A L+  V+   R  +   W      QP+L      D  L    P L    + H +++ + L  L D     + +   D ++R     + L R  P     +    +  VRA   +++  +  R  L + S  VRS A   + ++G DP  +Y + L S +     + GL E GT +D   +R    +    +R AAVR L R     SD ++   G +LL DP+PGVVRE + + D
Sbjct:   49 QLAEAVCHAVGYIREPGVRRLRSSRDPEALPLLVVRCVDWVPQVREIARAAVLA------RFAQADRAGLLPLVVALSRRAVDG-WVDEHLLQPMLRSPELLDLALAS--PDLRTRRTVHESALHAGL--LSDEQLASIAMHDHDDVIRTRVGHLLLDRGDPRFVLPLLDGGAPKVRARALQLLGVETARERLAESSSLVRSMAQALVLRSGGDPAAYYREALRSGAVTRATVAGLGETGTLDDVDLVRAQFADDRPRVRVAAVRGLRRLLANPSDPRAAEYGRELLTDPSPGVVREAVALLD 340          
BLAST of mRNA_P-wetherbeei_contig16367.1.1 vs. uniprot
Match: A0A268SDJ9_9BACL (Uncharacterized protein n=8 Tax=Paenibacillus TaxID=44249 RepID=A0A268SDJ9_9BACL)

HSP 1 Score: 79.7 bits (195), Expect = 7.830e-13
Identity = 86/305 (28.20%), Postives = 136/305 (44.59%), Query Frame = 1
Query:   49 LALCTLHRNGYVREAALRILAFEQDGRWLAPCFLRLSDWVPSIRELARARVLNYCRPEFRRHWSDHAHLVVEVLQRPRTQMGAPWAQPVLDFLLEDLQPFLELHPSHRASVRSLLKRLGDRVPLDL-----------MLASSDFMLRRMALVRSSP--------EQRAQMRSDPSSAVRAEVIS------PQDFRW----GLLDRSERVRSRAS-HALKQAGEDPRRFYLDHL----ESHSAIALRGLREWGTREDTAAIRPFLKNPHAGLRRAAVRALARSDAKSLPGEQL--LKDPAPGVVRE 855
            L++ T+H +GY+REAA+R +  E +        LRL+DWVP IR LARA +    +PE  + W ++  LV  +    R Q  + + + V   L +    F+ LH + R S  S +++   R+ L+             L   +  +RR A  R           E    M+ D   ++R E ++      P D +      LLD +  VR  A  +A +        +YLD +    + H A A+ GL E G + D   +  + K+P   +R+A +R L R DA S     +  L    PG+ RE
Sbjct:  109 LSMLTMHWSGYIREAAVRRMIREDESYSFPYLLLRLNDWVPEIRHLARAALELKLKPEHAKLWMENIMLVERLRICGRDQFES-FIESVYHLLRQKECRFV-LHNA-RVSPESSIRQFAFRISLEAEGTDTSVIMEQALRDENPAIRRWAAQRVDRMLSGGKLREALLGMQLDSVPSIRREGLAVLATMYPDDAKAIIMNRLLDSNLPVRDTARRYAKRWMNVSYAEWYLDVIWGDDQQHLAAAISGLGETGDKADAEVLCEYAKHPSIAVRKAVIRGLMRLDASSYGTHFVHSLTSEQPGISRE 410          
BLAST of mRNA_P-wetherbeei_contig16367.1.1 vs. uniprot
Match: A0A841H1A9_9BACT (HEAT repeat protein n=1 Tax=Longimicrobium terrae TaxID=1639882 RepID=A0A841H1A9_9BACT)

HSP 1 Score: 78.2 bits (191), Expect = 2.490e-12
Identity = 80/267 (29.96%), Postives = 117/267 (43.82%), Query Frame = 1
Query:   67 HRNGYVREAALRILAFEQDGRWLAPCFLRLSDWVPSIRELARARVLNYCRPEFRRHWSDHAHLVVEVLQRPRTQMGAPWAQPVLDFLLEDLQPFLE--LHPSHRASVRSLLKRLGDRVPLDL-------MLASSDFMLRRMA--LVRSSPEQRAQ-----MRSDPSSAVRAEVIS-----PQDFRW----GLLDRSERVRSRASHALKQAGE-DPRRFYLDHLESHS---AIALRGLREWGTREDTAAIRPFLKNPHAGLRRAAVRA 780
            H +G+VR   +  LA ++DGR L P  LR  DWVP +R+ ARA + +     +  HW  +  LV+   +  R   G       L       +  L   LH   RA   +    L D    +L       +L S D  +RR A  +V +  ++ A+     +R D ++ +RA  +        D  W    GL+DRS  VR  A   LK     D   FY + + +     A+A+ GL E GT  D   +   L +  A +RRAAVRA
Sbjct:  106 HGDGFVRAEMVARLAEQRDGRELWPLLLRAKDWVPQVRDAARAALRDRLLAGYEEHWMRNLALVLWAGEGERADAGLAAEVMALVRASPRGEEMLTRGLHSGERAVRHAAFAALTDVGGPELAYRLETVLLRSDDVAVRRRAAAMVATLEDEDARRLHAYLRLDRAAVIRARGLELAVRVATDPEWMLREGLVDRSAMVRQTARFHLKTVAPLDVAAFYRERITADHPQLAVAVAGLGETGTAADFGILSAQLNHRSAAVRRAAVRA 372          
BLAST of mRNA_P-wetherbeei_contig16367.1.1 vs. uniprot
Match: A0A837KE24_9BACL (Uncharacterized protein n=3 Tax=Brevibacillus TaxID=55080 RepID=A0A837KE24_9BACL)

HSP 1 Score: 77.8 bits (190), Expect = 3.460e-12
Identity = 77/291 (26.46%), Postives = 130/291 (44.67%), Query Frame = 1
Query:   34 SDLSELALCTLHRNGYVREAALRILAFEQDGRWLAPCFLRLSDWVPSIRELARARVLNYCRPEFRRHWSDHAHLVVEVLQRPRTQMGAPWAQPVLDFLLEDLQPFLELHPSHRASVRS-------LLKRLGDRVPLDLMLASSD-----FMLRRMALVRSSPEQRA--------------QMRSDPSSAVRAEVISPQDFRW----------GLLDRSERVRSRASHALKQAGEDPRRFYLDHL---ESHSA-IALRGLREWGTREDTAAIRPFLKNPHAGLRRAAVRALA 786
            SDL+ + +C+ HRNGYVREAA+ +L  +  G  L    +RL+DW P IR LA        RP + +H+ +   L+          + A + +      LE++      HP++R  +RS       +++R    + ++L+    D      ++++ AL+R    +                ++R D   ++R   +     R+           LLD  + +R      LK    +   FY + L   E H   IA+ G+ E G R D   I PFL++ +  ++RAAV+ALA
Sbjct:  111 SDLNFIGICSFHRNGYVREAAIEVLLKQVTGAELPFLLIRLNDWQPKIRYLAFMACKLRFRPNYVKHFLESIFLL--------KHLSAYYNREKFSDFLEEIDAMFR-HPNNRDVLRSGFHSKDPVVRRFCFDLAINLLDIDPDEVIAEALIQKDALIRLQTVRHMCKQDENERLRKWLDRIRRDVFPSIRQLALQAYVDRFPEESTDALLAALLDGHKSIREMTRFYLKDKNINFATFYREKLVDTEEHVIPIAIVGVGETGVRADDQWILPFLRHENERIQRAAVKALA 392          
BLAST of mRNA_P-wetherbeei_contig16367.1.1 vs. uniprot
Match: A0A3M8CS91_9BACL (Uncharacterized protein n=1 Tax=Brevibacillus panacihumi TaxID=497735 RepID=A0A3M8CS91_9BACL)

HSP 1 Score: 77.8 bits (190), Expect = 3.520e-12
Identity = 72/282 (25.53%), Postives = 127/282 (45.04%), Query Frame = 1
Query:   34 SDLSELALCTLHRNGYVREAALRILAFEQDGRWLAPCFLRLSDWVPSIRELARARVLNYCRPEFRRHWSDHAHLVVEVLQRPRTQMGAPWAQPVLDFLL--EDLQPFLELHPSHRASVRSLLKRLGDRVP-------LDLMLASSDFMLRRMALVRSSPEQRAQM---------RSDPSSAVRAEVI----------SPQDFRWGLLDRSERVRSRASHALKQAGEDPRRFYLDHLESHSA----IALRGLREWGTREDTAAIRPFLKNPHAGLRRAAVRAL 783
            SD+S + +C+ HRNGYVREAA+ +L+ +  G  +   FLRL+DW P IR LA   +      ++ +++ +  +L+  +      +  +     + +     ++    L    S   +VR         +P       ++  L  SD ++R + +V+   +  + +         RSD    +R  V+          S ++    LLDR + +R  A + LK    +   FY + L+        +A+ GL E G + D   + PFL + +A L RAAV+AL
Sbjct:  122 SDVSFIGICSFHRNGYVREAAIEVLSKQASGADIPFLFLRLNDWQPKIRFLAFKAIKQKLHSDYVKYYLEAIYLIKHLSDYYTREKFSDLVDEIYEVFRHPQNRDVLLSGFHSKDPAVRRFCFETAINLPDMDQKSVIEEALCQSDALIR-LQIVKHICKSYSNVCLNPWLKRFRSDVFPPIRQLVLQAYMDRFPEQSTEELLAALLDRHKTIREMARYYLKDQLINYPSFYRETLKETDKGLIQVAIVGLGETGEKADAQWVTPFLCHVNAQLHRAAVKAL 402          
BLAST of mRNA_P-wetherbeei_contig16367.1.1 vs. uniprot
Match: A0A542PW75_9BACL (Uncharacterized protein n=3 Tax=Brevibacillus TaxID=55080 RepID=A0A542PW75_9BACL)

HSP 1 Score: 77.0 bits (188), Expect = 6.230e-12
Identity = 80/292 (27.40%), Postives = 127/292 (43.49%), Query Frame = 1
Query:   34 SDLSELALCTLHRNGYVREAALRILAFEQDGRWLAPCFLRLSDWVPSIRELARARVLNYCRPEFRRHWSDHAHLVVEVLQRPRTQMGAPWAQPVLDFLLEDLQPFLELHPSHRASVRS---------------LLKRLGDRVPLDLM---LASSDFMLRRMALVRSSPEQRA---------QMRSDPSSAVRAEVISPQDFRW----------GLLDRSERVRSRASHALKQAGEDPRRFYLDHL----ESHSAIALRGLREWGTREDTAAIRPFLKNPHAGLRRAAVRALA 786
            SDL  + +C+ HRNGYVREAA+ +L  +  G  +    +RL+DW P IR LA        RP + +H+ +   L+          + A + +      LE++      HP++R  VRS               L   L D  P +++   L   D ++R + +V+   +Q           Q+R D    +R   +     R+           LLD  + +R  A   LK    D   FY + L    E    IA+ G+ E G + +   I PFL++ +  ++RAAV+ALA
Sbjct:  111 SDLCFIGICSFHRNGYVREAAVEMLLKQVTGAEIPFLLIRLNDWQPKIRYLAFKACKLRFRPNYVKHFLESVFLL--------KHLSAYYNREKFSDFLEEIDAMFR-HPNNRDVVRSGFHSKDPVVRRFCFDLANNLHDIDPDEVIAEALIQKDALIR-LQMVKHMCKQDENDRLQRWLDQIRRDVFPPIRQLALQAYVDRFPEESTDALLAALLDGHKSIREMARFYLKDKKIDFAAFYREKLVGTEEQVIPIAIVGVGETGVKANDQWILPFLRHENERIQRAAVKALA 392          
BLAST of mRNA_P-wetherbeei_contig16367.1.1 vs. uniprot
Match: A0A5C5WEE8_9BACT (HEAT repeat protein n=1 Tax=Botrimarina hoheduenensis TaxID=2528000 RepID=A0A5C5WEE8_9BACT)

HSP 1 Score: 77.0 bits (188), Expect = 6.350e-12
Identity = 96/363 (26.45%), Postives = 150/363 (41.32%), Query Frame = 1
Query:   49 LALCTLHRNGYVREAALRILAFEQDGRWLAPCFLRLSDWVPSIRELARARVLNYCRPEFRRHWSDHAHLVVEVLQRPRTQMGAPWAQPVLDFLLEDLQPFLELHPSHRASVRSLLKRLGDRVPLD-------------------------------------LMLASSDFMLRRMALVRSSPEQR-AQMRSDPSSAVRAEVISPQDFRWGLLDRSERVRSRASHALKQAG-EDPRRFYLDHL--ESHSAIALRGLREWGTREDTAAIRPFLKNPHAGLRRAAVRALARSDAKSLPGEQL-------LKDPAPGVVREYLK-----VADLSTEKLRE-LSRQP--ELRKVCLQSLLGRGRWEAL 969
            L L + HRNGYVRE A+++LA   DG  +    +R +DWV +I  LA+  V       + ++W ++  LV  + +  R  +       + D     L     L P H   +RSL+   GDR+ +                                      L LA+   ++ R+     +P +R A +    SS   AE++    ++    DRS  VR  A   LK  G  + R  YL  L  E  +  AL GL E    +D   +R +  +     RR A+  LAR     L G+Q+       L D +PGV ++  +      A +  E+L   L+R P    R+ CL+     G+W++L
Sbjct:  127 LGLLSFHRNGYVREEAVKLLAQMSDGAEVPYLLIRQNDWVTAISRLAQRAVKERLGYSYSQYWFNNLDLVAHLPEFGRNDLSH-----ITDATFSQL-----LEPEHDGRLRSLIAS-GDRITIRRFVKRSFELPGSHSERVAKLGIDAEDAVVRLWSARKLLTLATDSPLIDRLLSDSFAPVRREAYIAWAASSRAEAEMV----WKQAAYDRSAGVRDLARFELKTQGLTNIREQYLASLQEEPENLAALMGLSECCEDQDAQLLREYCSHDRPRFRRVAISGLAR-----LLGDQVIHELVGWLADESPGVAKQAARSLQAHAAIVEGEQLWSVLTRSPTDNGRRTCLRLFYEMGKWKSL 469          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16367.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5C5ZVJ0_9BACT2.120e-1529.44Uncharacterized protein n=1 Tax=Rhodopirellula pil... [more]
A0A3M8B771_9BACL2.300e-1427.05HEAT repeat domain-containing protein n=2 Tax=Brev... [more]
A0A7Z7CGR0_9BACL9.870e-1427.01HEAT repeat n=4 Tax=Paenibacillus TaxID=44249 RepI... [more]
A0A8F9YHS4_9PSEU2.520e-1329.70Uncharacterized protein n=1 Tax=Amycolatopsis sp. ... [more]
A0A268SDJ9_9BACL7.830e-1328.20Uncharacterized protein n=8 Tax=Paenibacillus TaxI... [more]
A0A841H1A9_9BACT2.490e-1229.96HEAT repeat protein n=1 Tax=Longimicrobium terrae ... [more]
A0A837KE24_9BACL3.460e-1226.46Uncharacterized protein n=3 Tax=Brevibacillus TaxI... [more]
A0A3M8CS91_9BACL3.520e-1225.53Uncharacterized protein n=1 Tax=Brevibacillus pana... [more]
A0A542PW75_9BACL6.230e-1227.40Uncharacterized protein n=3 Tax=Brevibacillus TaxI... [more]
A0A5C5WEE8_9BACT6.350e-1226.45HEAT repeat protein n=1 Tax=Botrimarina hoheduenen... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16367contigP-wetherbeei_contig16367:308..1288 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog749927.AMED_0898
Model size981
Max annot lvl201174|Actinobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue7.56e-16
EggNOG OGsCOG1413@1|root,COG1413@2|Bacteria,2I930@201174|Actinobacteria,4E4K6@85010|Pseudonocardiales
Descriptionlyase activity
Cds size969
COG categoryC
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186084.5242999-UTR-P-wetherbeei_contig16367:307..3191683186084.5242999-UTR-P-wetherbeei_contig16367:307..319Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig16367 308..319 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186084.5341756-CDS-P-wetherbeei_contig16367:319..12881683186084.5341756-CDS-P-wetherbeei_contig16367:319..1288Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16367 320..1288 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16367.1.1prot_P-wetherbeei_contig16367.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig16367 320..1288 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig16367.1.1

>prot_P-wetherbeei_contig16367.1.1 ID=prot_P-wetherbeei_contig16367.1.1|Name=mRNA_P-wetherbeei_contig16367.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=323bp
MSAYGIPSDLSELALCTLHRNGYVREAALRILAFEQDGRWLAPCFLRLSD
WVPSIRELARARVLNYCRPEFRRHWSDHAHLVVEVLQRPRTQMGAPWAQP
VLDFLLEDLQPFLELHPSHRASVRSLLKRLGDRVPLDLMLASSDFMLRRM
ALVRSSPEQRAQMRSDPSSAVRAEVISPQDFRWGLLDRSERVRSRASHAL
KQAGEDPRRFYLDHLESHSAIALRGLREWGTREDTAAIRPFLKNPHAGLR
RAAVRALARSDAKSLPGEQLLKDPAPGVVREYLKVADLSTEKLRELSRQP
ELRKVCLQSLLGRGRWEALLTLL
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mRNA from alignment at P-wetherbeei_contig16367:308..1288+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig16367.1.1 ID=mRNA_P-wetherbeei_contig16367.1.1|Name=mRNA_P-wetherbeei_contig16367.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=981bp|location=Sequence derived from alignment at P-wetherbeei_contig16367:308..1288+ (Phaeothamnion wetherbeei SAG_119_79)
GCCTGGGTCGGGATGAGCGCCTATGGCATTCCGTCGGACTTGTCCGAATT GGCGCTTTGCACACTCCATCGCAACGGATATGTGCGTGAGGCGGCTTTAC GCATTTTGGCCTTCGAGCAGGACGGCCGCTGGCTCGCTCCCTGTTTCCTG CGTCTGAGCGACTGGGTGCCCTCGATTCGCGAGCTGGCGCGCGCGAGAGT TCTAAACTACTGCCGACCGGAATTCCGGCGCCACTGGAGCGACCACGCCC ACTTGGTCGTGGAGGTGCTGCAGCGCCCTCGGACCCAGATGGGGGCGCCC TGGGCGCAGCCGGTCCTTGACTTTCTCCTGGAAGACCTGCAGCCGTTCCT GGAATTGCACCCTTCTCACAGGGCTTCCGTGCGGAGTCTGCTCAAACGCC TGGGGGACCGAGTTCCCTTGGATTTGATGCTCGCGTCCTCCGATTTCATG TTGCGCCGTATGGCTCTGGTCCGCTCTTCTCCCGAGCAACGGGCCCAAAT GCGTAGCGATCCCAGCTCGGCGGTGCGGGCCGAAGTGATCTCCCCGCAAG ATTTTCGCTGGGGGCTTTTGGACAGGTCCGAGCGGGTGAGAAGTCGGGCC TCCCACGCGCTCAAGCAAGCGGGCGAGGACCCGCGGCGTTTCTACTTGGA CCATCTCGAGAGCCATTCTGCTATCGCTCTTCGGGGTCTCCGAGAGTGGG GGACGCGAGAGGATACAGCGGCGATACGTCCTTTCCTCAAGAATCCTCAT GCCGGCCTGCGACGGGCCGCCGTGCGCGCGCTGGCTCGAAGCGACGCGAA ATCCCTGCCCGGGGAGCAGCTGCTCAAGGATCCGGCTCCCGGAGTGGTGC GGGAGTATCTGAAAGTCGCCGACCTGTCGACGGAAAAGCTCCGGGAGCTT TCGCGCCAGCCCGAGCTTCGCAAAGTCTGTCTGCAGAGCTTGCTGGGTAG AGGACGCTGGGAAGCGCTATTGACTCTGCTT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig16367:308..1288+

>mRNA_P-wetherbeei_contig16367.1.1 ID=mRNA_P-wetherbeei_contig16367.1.1|Name=mRNA_P-wetherbeei_contig16367.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=969bp|location=Sequence derived from alignment at P-wetherbeei_contig16367:308..1288+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAGCGCCTATGGCATTCCGTCGGACTTGTCCGAATTGGCGCTTTGCAC
ACTCCATCGCAACGGATATGTGCGTGAGGCGGCTTTACGCATTTTGGCCT
TCGAGCAGGACGGCCGCTGGCTCGCTCCCTGTTTCCTGCGTCTGAGCGAC
TGGGTGCCCTCGATTCGCGAGCTGGCGCGCGCGAGAGTTCTAAACTACTG
CCGACCGGAATTCCGGCGCCACTGGAGCGACCACGCCCACTTGGTCGTGG
AGGTGCTGCAGCGCCCTCGGACCCAGATGGGGGCGCCCTGGGCGCAGCCG
GTCCTTGACTTTCTCCTGGAAGACCTGCAGCCGTTCCTGGAATTGCACCC
TTCTCACAGGGCTTCCGTGCGGAGTCTGCTCAAACGCCTGGGGGACCGAG
TTCCCTTGGATTTGATGCTCGCGTCCTCCGATTTCATGTTGCGCCGTATG
GCTCTGGTCCGCTCTTCTCCCGAGCAACGGGCCCAAATGCGTAGCGATCC
CAGCTCGGCGGTGCGGGCCGAAGTGATCTCCCCGCAAGATTTTCGCTGGG
GGCTTTTGGACAGGTCCGAGCGGGTGAGAAGTCGGGCCTCCCACGCGCTC
AAGCAAGCGGGCGAGGACCCGCGGCGTTTCTACTTGGACCATCTCGAGAG
CCATTCTGCTATCGCTCTTCGGGGTCTCCGAGAGTGGGGGACGCGAGAGG
ATACAGCGGCGATACGTCCTTTCCTCAAGAATCCTCATGCCGGCCTGCGA
CGGGCCGCCGTGCGCGCGCTGGCTCGAAGCGACGCGAAATCCCTGCCCGG
GGAGCAGCTGCTCAAGGATCCGGCTCCCGGAGTGGTGCGGGAGTATCTGA
AAGTCGCCGACCTGTCGACGGAAAAGCTCCGGGAGCTTTCGCGCCAGCCC
GAGCTTCGCAAAGTCTGTCTGCAGAGCTTGCTGGGTAGAGGACGCTGGGA
AGCGCTATTGACTCTGCTT
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