mRNA_P-wetherbeei_contig16351.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig16351.1.1 vs. uniprot
Match: D8LI32_ECTSI (GRIP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI32_ECTSI) HSP 1 Score: 113 bits (283), Expect = 4.670e-26 Identity = 74/132 (56.06%), Postives = 91/132 (68.94%), Query Frame = 1
Query: 22 GESNQE-LQDTLAKYKRLLSLARRSIEENQRQIAEKDALHAALRAQLETAQKAQRRDEAAAGIGAEPLAMLRRVEEGGAQWVLLEY--EGGGKGWKSFSNEAEVADFVRR-DGAEPLAVPAASLPPERSEQV 405
G + QE +Q+TLAK+KRLLSLARRSIEENQRQI EKD AALR L A+ A+RRD+ AG A PL +LRRV EGG W+L+EY E +GWK F++EA V++F + EPL +P SL PE S V
Sbjct: 27 GTAEQENVQETLAKFKRLLSLARRSIEENQRQITEKDGQLAALREALGAAENARRRDDEHAG--ATPLQLLRRVREGGMWWLLVEYDDEYETQGWKGFADEAAVSEFANSVNVGEPLNIPPVSLSPEESATV 156
BLAST of mRNA_P-wetherbeei_contig16351.1.1 vs. uniprot
Match: A0A835YNU9_9STRA (GRIP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNU9_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 4.870e-20 Identity = 62/127 (48.82%), Postives = 74/127 (58.27%), Query Frame = 1
Query: 43 QDTLAKYKRLLSLARRSIEENQRQIAEKDALHAALRAQLETAQKAQRRDEAAAGIGAEPLAMLRRVEEGGAQWVLLEYEGGGK------GWKSFSNEAEVADFVRRDGAEPLAVPAASLPPERSEQV 405
+ TLAKYKRLL+LARRSIEENQRQ R +L Q AQR+ + AEPLA+LRRV+ G W+LLE+E W+ F + EV F RR GAEPL VPA SL PE E +
Sbjct: 26 ESTLAKYKRLLTLARRSIEENQRQXXXXXXXXXXXRDELSQTQAAQRQSQP---TDAEPLAVLRRVDHDGFTWLLLEHEXXXXXXETVLAWRKFESVDEVQAFARRPGAEPLVVPACSLSPEECEAI 149
BLAST of mRNA_P-wetherbeei_contig16351.1.1 vs. uniprot
Match: A0A7S4D4P1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D4P1_HETAK) HSP 1 Score: 76.3 bits (186), Expect = 2.300e-13 Identity = 43/132 (32.58%), Postives = 81/132 (61.36%), Query Frame = 1
Query: 28 SNQELQDTLAKYKRLLSLARRSIEENQRQIAEKDALHAALRAQLETAQKAQRRDEAAA-GIGAEPLAMLRRVEEGGAQWVLLEYEG------GGKGWKSFSNEAEVADFVRRDGAEPLAVPAASLPPERSEQ 402
++Q+L++T+ KYK+LLS+AR+ +E+NQR +++KD L+ +LE++++ ++ A G+ P ++RRV++ G WVL E+ W+ F++ E+ DFV+ EP+ +P A L + ++Q
Sbjct: 22 ASQQLKETILKYKKLLSMARQGLEDNQRHLSDKDEQIRQLQHELESSKQRNAKENAKTRGLEMNPKRIVRRVDQDGVIWVLFEWYSVETDARSPPSWREFNSYGELEDFVQCVSGEPIEIPPACLTSDETQQ 153
BLAST of mRNA_P-wetherbeei_contig16351.1.1 vs. uniprot
Match: A0A482SXA9_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SXA9_9ARCH) HSP 1 Score: 67.8 bits (164), Expect = 5.320e-11 Identity = 51/132 (38.64%), Postives = 71/132 (53.79%), Query Frame = 1
Query: 28 SNQELQDTLAKYKRLLSLARRSIEENQRQIAEKDALHAALRAQLETAQKAQ------RRDEAAAGIGAEPLAMLRRVEEGGAQWVLLEYEGGGKGWKSFSNEAEVADFVRRDGAEPLAVPAASLPPERSEQV 405
++Q ++TLAKYKRLLS+AR S+E NQ + KD + L A LE + + R DE G P +L RV+ G WVL E E WKSFS+E+ + D+++R PL P L E S ++
Sbjct: 12 NSQGQEETLAKYKRLLSMARSSLESNQAALTAKDQQISQLLAVLEEERNKRVSSRIIRDDE---GGQQYPRRILCRVDVEGQIWVLFEMESTEDDWKSFSDESGLQDYLKRIPGIPLVCPTKCLSAEESAKL 140
BLAST of mRNA_P-wetherbeei_contig16351.1.1 vs. uniprot
Match: A0A6A3FS57_9STRA (GRIP domain-containing protein n=16 Tax=Phytophthora TaxID=4783 RepID=A0A6A3FS57_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 9.990e-11 Identity = 48/131 (36.64%), Postives = 71/131 (54.20%), Query Frame = 1
Query: 34 QELQDTLAKYKRLLSLARRSIEENQRQIAEKDALHAALRAQLETAQKAQRRDEAAAGIGAEPLAMLRRVEEGGAQWVLLEY-------EGGGKGWKSFSNEAEVADFVRRDGAEPLAVPAASLPPERSEQV 405
QE++DT K KRLL++A+RSI+ ++++IAEKDA LR +L +++ Q A +P +L +V G W L+EY E W F +EAE+ + R EPL +P SL P E+V
Sbjct: 70 QEMEDTENKLKRLLAMAKRSIDNSKQEIAEKDAAIQQLREELAKSRQTQH-SWAVDAATRDPRQLLHKVSHGNLLWCLVEYADESELDEAKEFAWHCFRSEAEIQAYANRASGEPLTLPDFSLTPYEVERV 199
BLAST of mRNA_P-wetherbeei_contig16351.1.1 vs. uniprot
Match: V9EJ60_PHYPR (GRIP domain-containing protein n=45 Tax=Phytophthora TaxID=4783 RepID=V9EJ60_PHYPR) HSP 1 Score: 66.6 bits (161), Expect = 2.150e-9 Identity = 44/131 (33.59%), Postives = 70/131 (53.44%), Query Frame = 1
Query: 34 QELQDTLAKYKRLLSLARRSIEENQRQIAEKDALHAALRAQLETAQKAQRRDEAAAGIGAEPLAMLRRVEEGGAQWVLLEYEGGGK-------GWKSFSNEAEVADFVRRDGAEPLAVPAASLPPERSEQV 405
QE+++T K KRLL++A+RSI+ +++++AEKD LR +L +Q+A R +P +L +V G W L+EY + W F NE E+ ++ R EPL +P S+ P E+V
Sbjct: 76 QEMEETENKLKRLLAMAKRSIDNSKQELAEKDETIQKLREELAKSQQA-RHSWFVDASTRDPRQLLHKVAHGNLLWCLVEYVNENELDDSTEFAWHCFHNEVEIQEYANRATGEPLTLPDLSMAPYEVERV 205
BLAST of mRNA_P-wetherbeei_contig16351.1.1 vs. uniprot
Match: A0A8K1CW38_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CW38_PYTOL) HSP 1 Score: 66.2 bits (160), Expect = 3.510e-9 Identity = 44/130 (33.85%), Postives = 71/130 (54.62%), Query Frame = 1
Query: 34 QELQDTLAKYKRLLSLARRSIEENQRQIAEKDALHAALRAQLETAQKAQRRDEAAAGIGAEPLAMLRRVEEGGAQWVLLEYEGGGK------GWKSFSNEAEVADFVRRDGAEPLAVPAASLPPERSEQV 405
QE+++T K KRLL++A+RSI+ +++++A+KDA LRA+L T A E +P +L +V +G W L+EY W F +E ++ + R EPLA+P+ SL P E++
Sbjct: 55 QEMEETETKLKRLLAMAKRSIDNSKQELADKDAEIEQLRAELATKAHASHTWETNETTR-DPRRILSKVAQGNTLWCLVEYASDDSDDTSDFAWHRFQSEEQIKAYANRANGEPLALPSLSLTPFEVERM 183
BLAST of mRNA_P-wetherbeei_contig16351.1.1 vs. uniprot
Match: A0A5D6XWN8_9STRA (GRIP domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XWN8_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 3.740e-9 Identity = 49/133 (36.84%), Postives = 70/133 (52.63%), Query Frame = 1
Query: 34 QELQDTLAKYKRLLSLARRSIEENQRQIAEKDALHAALRAQLETAQKAQR--RDEAAAGIGAEPLAMLRRVEEGGAQWVLLEYEGGGK-------GWKSFSNEAEVADFVRRDGAEPLAVPAASLPPERSEQV 405
QEL+DT AK KRLL++A+RSI+ +++ IA KDA LRAQL A R +AA +P +L ++ G A W L+EY W F++ E+ + R EP+ +P SL P SE+
Sbjct: 56 QELEDTEAKLKRLLAMAKRSIDNSKQDIAAKDAELDELRAQLAKRAAASHSWRPDAATR---DPKRVLHKIAHGSALWCLVEYANESDVDDAQEFAWHRFASAEELRAYAARASGEPIVLPELSLTPFESERA 185
BLAST of mRNA_P-wetherbeei_contig16351.1.1 vs. uniprot
Match: H3GH33_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GH33_PHYRM) HSP 1 Score: 65.5 bits (158), Expect = 4.670e-9 Identity = 44/131 (33.59%), Postives = 69/131 (52.67%), Query Frame = 1
Query: 34 QELQDTLAKYKRLLSLARRSIEENQRQIAEKDALHAALRAQLETAQKAQRRDEAAAGIGAEPLAMLRRVEEGGAQWVLLEY-------EGGGKGWKSFSNEAEVADFVRRDGAEPLAVPAASLPPERSEQV 405
QE+++T K KRLL++A+RSI+ +++++ EKD + LR +L +Q+A R P +L +V GG W L+EY + W F +E E+ + R EPL +P SL P E+V
Sbjct: 15 QEMEETETKLKRLLAMAKRSIDNSKQELVEKDEVIEKLRDELSKSQQA-RHSWVVDASTRSPRQLLHKVSHGGLLWCLVEYADEIEFEDSKEFAWHCFRDEGEIQAYADRASGEPLTLPDFSLTPYEVERV 144
BLAST of mRNA_P-wetherbeei_contig16351.1.1 vs. uniprot
Match: A0A3R7KVI4_9STRA (GRIP domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7KVI4_9STRA) HSP 1 Score: 65.5 bits (158), Expect = 5.280e-9 Identity = 46/132 (34.85%), Postives = 71/132 (53.79%), Query Frame = 1
Query: 34 QELQDTLAKYKRLLSLARRSIEENQRQIAEKDALHAALRAQLETAQKAQRRDEAAAGIGA-EPLAMLRRVEEGGAQWVLLEY-------EGGGKGWKSFSNEAEVADFVRRDGAEPLAVPAASLPPERSEQV 405
QE+++T K KRLL++A+RSI+ ++++++EKD LR E ++ AQ R + +P +L +V GG W L+EY E W F +EAE+ + R EPL +P SL P E+V
Sbjct: 69 QEMEETETKLKRLLAMAKRSIDNSKQELSEKDEAIQNLRE--EVSRSAQTRHSWSVDASTRDPRQLLHKVAHGGLLWCLVEYANESEFDEAKEVAWHCFRDEAEIQAYANRASGEPLTLPDFSLTPYEVERV 198 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16351.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig16351.1.1 >prot_P-wetherbeei_contig16351.1.1 ID=prot_P-wetherbeei_contig16351.1.1|Name=mRNA_P-wetherbeei_contig16351.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=66bp MLRRVEEGGAQWVLLEYEGGGKGWKSFSNEAEVADFVRRDGAEPLAVPAAback to top mRNA from alignment at P-wetherbeei_contig16351:2..734- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig16351.1.1 ID=mRNA_P-wetherbeei_contig16351.1.1|Name=mRNA_P-wetherbeei_contig16351.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=733bp|location=Sequence derived from alignment at P-wetherbeei_contig16351:2..734- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig16351:2..734- >mRNA_P-wetherbeei_contig16351.1.1 ID=mRNA_P-wetherbeei_contig16351.1.1|Name=mRNA_P-wetherbeei_contig16351.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=198bp|location=Sequence derived from alignment at P-wetherbeei_contig16351:2..734- (Phaeothamnion wetherbeei SAG_119_79)back to top |