mRNA_P-wetherbeei_contig16347.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig16347.1.1 vs. uniprot
Match: A0A6V1NFC1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NFC1_HETAK) HSP 1 Score: 67.4 bits (163), Expect = 3.650e-11 Identity = 38/87 (43.68%), Postives = 52/87 (59.77%), Query Frame = 1
Query: 43 QVLVGERVLMLTIGFDLCVPHPHRHLHAVLKAVFSAR--DGARPDRRRCTMRQALQAAANFATDQLRTDLCLRHPAENVAAAAVYLA 297
++L ER+L+ T+GFD+C+ HP+++L V K + + G + D RQ Q A NF D RT LCLRHP VAA AV+LA
Sbjct: 127 KILTCERILLHTMGFDMCIEHPYKYLIEVCKKLKNKGIIGGNQDD---AGGRQFAQTALNFVNDSFRTSLCLRHPPPLVAAGAVFLA 210
BLAST of mRNA_P-wetherbeei_contig16347.1.1 vs. uniprot
Match: A0A7S4F3M7_CHRCT (Hypothetical protein n=2 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4F3M7_CHRCT) HSP 1 Score: 67.8 bits (164), Expect = 4.360e-11 Identity = 40/89 (44.94%), Postives = 53/89 (59.55%), Query Frame = 1
Query: 43 QVLVGERVLMLTIGFDLCVPHPHRHLHAVLKAVFSARDGARPDRRRCTMRQALQAAANFATDQLRTDLCLRHPAENVAAAAVYLALRLL 309
++LV ERVL+ T+GFDL V H +R L A +K++ RD A Q A NF D LRT +CL++ +V+AAAVYLA R L
Sbjct: 163 RILVSERVLLQTLGFDLTVEHAYRPLLAYVKSIQGTRDLA-------------QVAWNFINDSLRTTICLQYAPRHVSAAAVYLAARYL 238
BLAST of mRNA_P-wetherbeei_contig16347.1.1 vs. uniprot
Match: A0A7S0PZF2_9EUKA (Hypothetical protein n=2 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0PZF2_9EUKA) HSP 1 Score: 65.9 bits (159), Expect = 2.000e-10 Identity = 40/89 (44.94%), Postives = 52/89 (58.43%), Query Frame = 1
Query: 43 QVLVGERVLMLTIGFDLCVPHPHRHLHAVLKAVFSARDGARPDRRRCTMRQALQAAANFATDQLRTDLCLRHPAENVAAAAVYLALRLL 309
++LV ERVL+ T+GFDL V HP+R L A +K++ RD A Q A NF D LRT +CL++ V+AAAV LA R L
Sbjct: 150 RILVSERVLLQTLGFDLTVEHPYRPLLAYVKSIQGTRDLA-------------QVAWNFINDSLRTTICLQYAPRCVSAAAVALAARYL 225
BLAST of mRNA_P-wetherbeei_contig16347.1.1 vs. uniprot
Match: A0A7S0J0B8_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J0B8_9EUKA) HSP 1 Score: 65.9 bits (159), Expect = 2.030e-10 Identity = 40/89 (44.94%), Postives = 52/89 (58.43%), Query Frame = 1
Query: 43 QVLVGERVLMLTIGFDLCVPHPHRHLHAVLKAVFSARDGARPDRRRCTMRQALQAAANFATDQLRTDLCLRHPAENVAAAAVYLALRLL 309
++LV ERVL+ T+GFDL V HP+R L A +K++ RD A Q A NF D LRT +CL++ V+AAAV LA R L
Sbjct: 152 RILVSERVLLQTLGFDLTVEHPYRPLLAYVKSIQGTRDLA-------------QVAWNFINDSLRTTICLQYAPRCVSAAAVSLAARYL 227
BLAST of mRNA_P-wetherbeei_contig16347.1.1 vs. uniprot
Match: D8LLM1_ECTSI (Cycline T n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLM1_ECTSI) HSP 1 Score: 63.5 bits (153), Expect = 6.480e-10 Identity = 36/91 (39.56%), Postives = 55/91 (60.44%), Query Frame = 1
Query: 28 KRICPQVLVGERVLMLTIGFDLCVPHPHRHLHAVLKAVFSARDGARPDRR--RCTMRQALQAAANFATDQLRTDLCLRHPAENVAAAAVYL 294
KR+ ++L+ ER ++ T+GF L V HP+ + ++LK +F+ GA + + RQ QAA +F D L T LCL++ + VAAA VYL
Sbjct: 123 KRLREKILIAERCVLHTLGFQLTVEHPYSVVMSLLKKLFTMGKGADGGKGADKALNRQLSQAATSFVNDSLLTTLCLQYRPKQVAAAVVYL 213
BLAST of mRNA_P-wetherbeei_contig16347.1.1 vs. uniprot
Match: A0A6H5JMA6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMA6_9PHAE) HSP 1 Score: 63.5 bits (153), Expect = 1.440e-9 Identity = 36/91 (39.56%), Postives = 55/91 (60.44%), Query Frame = 1
Query: 28 KRICPQVLVGERVLMLTIGFDLCVPHPHRHLHAVLKAVFSARDGARPDRR--RCTMRQALQAAANFATDQLRTDLCLRHPAENVAAAAVYL 294
KR+ ++L+ ER ++ T+GF L V HP+ + ++LK +F+ GA + + RQ QAA +F D L T LCL++ + VAAA VYL
Sbjct: 136 KRLREKILIAERCVLHTLGFQLTVEHPYSVVMSLLKKLFTMGKGADGGKGADKALNRQLSQAATSFVNDSLLTTLCLQYRPKQVAAAVVYL 226
BLAST of mRNA_P-wetherbeei_contig16347.1.1 vs. uniprot
Match: A0A2P5XK92_GOSBA (CYCLIN domain-containing protein n=1 Tax=Gossypium barbadense TaxID=3634 RepID=A0A2P5XK92_GOSBA) HSP 1 Score: 62.8 bits (151), Expect = 2.750e-9 Identity = 35/103 (33.98%), Postives = 56/103 (54.37%), Query Frame = 1
Query: 1 FCVKIQNIRKRICPQVLVGERVLMLTIGFDLCVPHPHRHLHAVLKAVFSARDGARPDRRRCTMRQALQAAANFATDQLRTDLCLRHPAENVAAAAVYLALRLL 309
FC++ + ++ +L+GERV++ T+GFDL V HP++ L +K A++ Q A NF D LRT LCL+ ++AA A++LA + L
Sbjct: 104 FCIQFSEVYEQQKELILLGERVVLATLGFDLNVHHPYKPLVEAIKKFKVAQNAL------------AQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFL 194
BLAST of mRNA_P-wetherbeei_contig16347.1.1 vs. uniprot
Match: A0A7S3TKL7_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3TKL7_9SPIT) HSP 1 Score: 62.0 bits (149), Expect = 4.620e-9 Identity = 35/85 (41.18%), Postives = 49/85 (57.65%), Query Frame = 1
Query: 43 QVLVGERVLMLTIGFDLCVPHPHRHLHAVLKAVFSARDGARPDRRRCTMRQALQAAANFATDQLRTDLCLRHPAENVAAAAVYLA 297
+VL+ ER+L+ T+GFDL + HP+R L +K++ RD A Q A NF D LRT +CL++ VAAAA+ LA
Sbjct: 146 KVLISERILLQTLGFDLSIEHPYRPLLGYVKSITGTRDLA-------------QIAWNFINDSLRTTVCLQYSPRYVAAAALSLA 217
BLAST of mRNA_P-wetherbeei_contig16347.1.1 vs. uniprot
Match: A0A7R9UUW5_DIALT (Hypothetical protein (Fragment) n=3 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9UUW5_DIALT) HSP 1 Score: 61.6 bits (148), Expect = 6.230e-9 Identity = 38/85 (44.71%), Postives = 50/85 (58.82%), Query Frame = 1
Query: 43 QVLVGERVLMLTIGFDLCVPHPHRHLHAVLKAVFSARDGARPDRRRCTMRQALQAAANFATDQLRTDLCLRHPAENVAAAAVYLA 297
QVLV ERVL+ T+GF+L + HP+R L A +K+V R+ A Q A NF D RT +CL++ + VAAAAV LA
Sbjct: 136 QVLVSERVLLQTLGFELQLEHPYRELLAYIKSVAMPREFA-------------QLAWNFVNDSYRTLVCLQYDHKTVAAAAVALA 207
BLAST of mRNA_P-wetherbeei_contig16347.1.1 vs. uniprot
Match: A0A1D6M6R4_MAIZE (Cyclin-T1-5 (Fragment) n=3 Tax=Zea mays TaxID=4577 RepID=A0A1D6M6R4_MAIZE) HSP 1 Score: 59.3 bits (142), Expect = 8.900e-9 Identity = 34/101 (33.66%), Postives = 56/101 (55.45%), Query Frame = 1
Query: 7 VKIQNIRKRICPQVLVGERVLMLTIGFDLCVPHPHRHLHAVLKAVFSARDGARPDRRRCTMRQALQAAANFATDQLRTDLCLRHPAENVAAAAVYLALRLL 309
+K++ + ++ +L+GERV+++T+GFDL V HP++ L +K +F A Q A NF D LRT LCL+ ++A A++LA + L
Sbjct: 44 IKLKEVYEQQKELILLGERVVLVTLGFDLNVNHPYKPLVEAIK-IFKVAQNA-----------LAQVAWNFVNDGLRTSLCLQFKPHHIAGGAIFLAAKFL 132 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16347.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig16347.1.1 >prot_P-wetherbeei_contig16347.1.1 ID=prot_P-wetherbeei_contig16347.1.1|Name=mRNA_P-wetherbeei_contig16347.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=103bp FCVKIQNIRKRICPQVLVGERVLMLTIGFDLCVPHPHRHLHAVLKAVFSAback to top mRNA from alignment at P-wetherbeei_contig16347:701..1009- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig16347.1.1 ID=mRNA_P-wetherbeei_contig16347.1.1|Name=mRNA_P-wetherbeei_contig16347.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=309bp|location=Sequence derived from alignment at P-wetherbeei_contig16347:701..1009- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig16347:701..1009- >mRNA_P-wetherbeei_contig16347.1.1 ID=mRNA_P-wetherbeei_contig16347.1.1|Name=mRNA_P-wetherbeei_contig16347.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=309bp|location=Sequence derived from alignment at P-wetherbeei_contig16347:701..1009- (Phaeothamnion wetherbeei SAG_119_79)back to top |