mRNA_P-wetherbeei_contig16340.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig16340.1.1 vs. uniprot
Match: A0A836C8C9_9STRA (Protoporphyrinogen oxidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8C9_9STRA) HSP 1 Score: 316 bits (809), Expect = 5.490e-103 Identity = 166/226 (73.45%), Postives = 192/226 (84.96%), Query Frame = 1
Query: 4 PPPRGEEESVKDFVTRHLGSEAFEKLIDPFVSGVYAGDPAKLAMRAALKKVARLELLGGPGLIDGAILRLQERAREAKALPAPLQADDLPTYAGGALGSFRRGLQSLPRAAAAALGPKRVRTGWTLASVERAQGGAKGYISTFKAGGGATRKVKSKFVACTAPAHRLGAVKGLEEIVPASKRLTEVHYPPVASVTLAYPKTAFRRPLRGFGNLIPRKMKVRESGLV 681
PPPRGEEESV+DFVTRHLG EAFEKLIDPFVSGVYAGDP+KLAM+AALKKV RLE LGGPGLIDGAILRLQERAR+ K LPAPLQA+DLP Y GGALGSF+ GL SLP+AAA ALGPKR+RTGW L+ VE+A+G +GY+ +F+ G+ R+VK+K V TAPAHRL AV G++E+VP + +L V+YPPVASVTLAYPK AFR PL GFG+LIPRKMKVR G +
Sbjct: 136 PPPRGEEESVRDFVTRHLGREAFEKLIDPFVSGVYAGDPSKLAMKAALKKVGRLEDLGGPGLIDGAILRLQERARQEKELPAPLQAEDLPKYKGGALGSFKDGLVSLPKAAAKALGPKRMRTGWVLSKVEKAEG--EGYMCSFRLADGSVRRVKAKVVCSTAPAHRLVAVDGVKELVPEAAQLENVYYPPVASVTLAYPKEAFRAPLVGFGHLIPRKMKVRTLGTI 359
BLAST of mRNA_P-wetherbeei_contig16340.1.1 vs. uniprot
Match: D7FU83_ECTSI (Protoporphyrinogen oxidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FU83_ECTSI) HSP 1 Score: 284 bits (726), Expect = 6.000e-90 Identity = 147/226 (65.04%), Postives = 182/226 (80.53%), Query Frame = 1
Query: 4 PPPRGEEESVKDFVTRHLGSEAFEKLIDPFVSGVYAGDPAKLAMRAALKKVARLELLGGPGLIDGAILRLQERAREAKALPAPLQADDLPTYAGGALGSFRRGLQSLPRAAAAALGPKRVRTGWTLASVERAQGGAKGYISTFKAGGGATRKVKSKFVACTAPAHRLGAVKGLEEIVPASKRLTEVHYPPVASVTLAYPKTAFRRPLRGFGNLIPRKMKVRESGLV 681
PPP EESVK+FVTRHLG EAFE+LIDPFVSGVYAGDP+KLA++AALKKVARLE+LGGPGLIDGAILRL+ERAR+ K LP PLQ++DLPTY GG+LGSFR GLQ LP AA A+G ++RT W + ++R++ G GY+ F G +++++K CTAPAHRL +V+GL +IVP + RL EV+YPPVASVTLAYPK++F+ L GFGNLIPRKMK+R G +
Sbjct: 187 PPPSDYEESVKEFVTRHLGPEAFERLIDPFVSGVYAGDPSKLAIKAALKKVARLEVLGGPGLIDGAILRLKERARQEKELPEPLQSEDLPTYQGGSLGSFREGLQMLPNAALKAMGKDKMRTSWVMKGIKRSEDG--GYLLAFDTPKG-PKRLQAKVAVCTAPAHRLASVEGLRDIVPEAARLDEVYYPPVASVTLAYPKSSFKVDLTGFGNLIPRKMKIRTLGTI 409
BLAST of mRNA_P-wetherbeei_contig16340.1.1 vs. uniprot
Match: W7TSK2_9STRA (Protoporphyrinogen oxidase n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TSK2_9STRA) HSP 1 Score: 231 bits (588), Expect = 1.190e-67 Identity = 130/225 (57.78%), Postives = 163/225 (72.44%), Query Frame = 1
Query: 7 PPRGEEESVKDFVTRHLGSEAFEKLIDPFVSGVYAGDPAKLAMRAALKKVARLELLGGPGLIDGAILRLQERAREAKALPAPLQADDLPTYAGGALGSFRRGLQSLPRAAAAALGPKRVRTGWTLASVERAQGGAKGYISTFKAGGGATRKVKSKFVACTAPAHRLGAVKGLEEIVPASKRLTEVHYPPVASVTLAYPKTAFRRPLRGFGNLIPRKMKVRESGLV 681
PP+ +EESVK+FVTRHLG+E FE++IDPFVSGVYAGDP+KL+M+AALKKV RLE LGG G++DGA+LR+QE R P + P Y GG LGSF+RGLQS+P A A ALG ++VR L SV +G GY + F+ G +++K + +A TAPAH + K L +VP + RL +V+YPPVASVTLAYPKTAFR PLRGFGNLIPR MK+R G +
Sbjct: 310 PPKDKEESVKEFVTRHLGAETFERIIDPFVSGVYAGDPSKLSMKAALKKVKRLEELGGRGILDGALLRIQEIQRTK-----PPVVPEHPVYKGGQLGSFKRGLQSMPLAVAKALGKEKVRLSHKLLSVVEGKGPKGGYEAVFQTPQG-RKRIKCQALAITAPAHVVH--KLLRPLVPEAARLADVYYPPVASVTLAYPKTAFREPLRGFGNLIPRSMKIRTLGTI 526
BLAST of mRNA_P-wetherbeei_contig16340.1.1 vs. uniprot
Match: A0A4D9DG57_9STRA (Protoporphyrinogen oxidase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DG57_9STRA) HSP 1 Score: 231 bits (589), Expect = 1.670e-67 Identity = 131/223 (58.74%), Postives = 163/223 (73.09%), Query Frame = 1
Query: 7 PPRGEEESVKDFVTRHLGSEAFEKLIDPFVSGVYAGDPAKLAMRAALKKVARLELLGGPGLIDGAILRLQERAREAKALPAPLQADDLPTYAGGALGSFRRGLQSLPRAAAAALGPKRVRTGWTLASVERAQGGAKGYISTFKAGGGATRKVKSKFVACTAPAHRLGAVKGLEEIVPASKRLTEVHYPPVASVTLAYPKTAFRRPLRGFGNLIPRKMKVRESG 675
PP+ +EESVK+FVTRHLG+E FE++IDPFVSGVYAGDP+KL+M+AALKKV RLE LGG G++DGA+LR+QE R P + P Y GG LGSF+RGLQS+P A A ALG ++VR L SV +G GY + F+ G ++VK + +A TAPAH + K L+ +VP + RL +V+YPPVASVTLAYPKTAFR PLRGFGNLIPR MK+R G
Sbjct: 215 PPKDKEESVKEFVTRHLGAETFERIIDPFVSGVYAGDPSKLSMKAALKKVKRLEELGGRGILDGALLRIQEIQRTK-----PPVVPEHPVYKGGQLGSFKRGLQSMPLAVAKALGKEKVRLSHKLLSVVEGKGPKGGYEAVFQTPQG-RKRVKCQALAITAPAHVVH--KLLQPLVPEAARLADVYYPPVASVTLAYPKTAFREPLRGFGNLIPRSMKIRTLG 429
BLAST of mRNA_P-wetherbeei_contig16340.1.1 vs. uniprot
Match: A0A7S2Y0E6_9STRA (Protoporphyrinogen oxidase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0E6_9STRA) HSP 1 Score: 220 bits (561), Expect = 1.570e-65 Identity = 122/226 (53.98%), Postives = 158/226 (69.91%), Query Frame = 1
Query: 7 PPRGEEESVKDFVTRHLGSEAFEKLIDPFVSGVYAGDPAKLAMRAALKKVARLELLGGPGLIDGAILRLQERAREAKALPAPLQADDLPTYAGGALGSFRRGLQSLPRAAAAALGPKRVRTGWTLASVERAQGGAKGYISTFKAGGGATRKVKSKFVACTAPAHRL-GAVKGLEEIVPASKRLTEVHYPPVASVTLAYPKTAFRRPLRGFGNLIPRKMKVRESGLV 681
PP EEE+++ FVTRHLG + FE++IDPFVSGVYAGDPAKL+++AALKK+ RLE GGPG++DGAILR+ E REA A P LPTY GG LGSF+ GLQ+LPRA LG K++RT W + +E+ + Y++T+ G + +++K V T PAH+L VKG +VP ++ L +V+YPPVASVTLAYP F RPL GFGNLIPR K+R G +
Sbjct: 178 PPASEEETIEQFVTRHLGRQTFERVIDPFVSGVYAGDPAKLSIKAALKKIKRLEDYGGPGILDGAILRISEMQREAAARPKD---PTLPTYKGGQLGSFKNGLQTLPRAVEKVLGSKKMRTSWKMVDLEKTP--EETYVATYDTPEG-KKMIEAKSVTSTVPAHKLVDIVKG---VVPEAEALNKVYYPPVASVTLAYPIEEFERPLVGFGNLIPRSQKIRTLGTI 394
BLAST of mRNA_P-wetherbeei_contig16340.1.1 vs. uniprot
Match: A0A1L3A3Q5_9EUGL (Protoporphyrinogen oxidase (Fragment) n=1 Tax=Strombomonas acuminata TaxID=201859 RepID=A0A1L3A3Q5_9EUGL) HSP 1 Score: 201 bits (512), Expect = 2.370e-59 Identity = 126/237 (53.16%), Postives = 160/237 (67.51%), Query Frame = 1
Query: 1 APPPRGEEESVKDFVTRHLGSEAFEKLIDPFVSGVYAGDPAKLAMRAALKKVARLELLG--GPGLIDGAILRLQERAREAKALPAPLQADDLPTYAGGALGSFRRGLQSLPRAAAAALGPKRVRTGWTLASVERAQGGAKGYISTFKAGGGATRKVKSKFVACTAPAHRLGAVKGLEEIVPASKRLTEVHYPPVASVTLAYPKTAFR--------RPLRGFGNLIPRKMKVRESGLV 681
+PPP EES+++FVTRHLG E FE++IDPFVSGVYAGDP +LAMRAALKK+ RLE LG GPGL+ GAI R +E A+E + PA PTY GG LGSFRRGLQ+LP A A LGP+RV+T W L ++ R GA +++TF G +KV++K VA TAP V ++VPA+ L +V+ PPVASVT+AY K F+ +PL GFG+L+PRKM VR G +
Sbjct: 129 SPPPAPYEESIREFVTRHLGEETFERVIDPFVSGVYAGDPDQLAMRAALKKIHRLEGLGDFGPGLVSGAINRFKELAKEKRENPAD---PAWPTYKGGQLGSFRRGLQTLPNAVAKELGPERVKTSWALTALTR--DGAH-FLATFDTPEG-IKKVRAKTVAVTAPTRVTAKV--CADLVPAAAGLDKVYSPPVASVTMAYRKEWFKELPGAKPGQPLVGFGHLLPRKMGVRSLGTI 356
BLAST of mRNA_P-wetherbeei_contig16340.1.1 vs. uniprot
Match: A0A1L3A3P4_9EUGL (Protoporphyrinogen oxidase (Fragment) n=1 Tax=Euglenaformis proxima TaxID=299110 RepID=A0A1L3A3P4_9EUGL) HSP 1 Score: 202 bits (515), Expect = 1.020e-58 Identity = 124/236 (52.54%), Postives = 159/236 (67.37%), Query Frame = 1
Query: 4 PPPRGEEESVKDFVTRHLGSEAFEKLIDPFVSGVYAGDPAKLAMRAALKKVARLELLG--GPGLIDGAILRLQERAREAKALPAPLQADDLPTYAGGALGSFRRGLQSLPRAAAAALGPKRVRTGWTLASVERAQGGAKGYISTFKAGGGATRKVKSKFVACTAPAHRLGAVKGLEEIVPASKRLTEVHYPPVASVTLAYPKTAFR--------RPLRGFGNLIPRKMKVRESGLV 681
PPP EES+++FVTRHLG E FE++IDPFVSGVYAGDP LAMRAALKK+ RLE LG GPGL+ GAI R +E A+E K P PTY GG LGSFR+GLQ+LP A A LGP RV+T W L S+ Q G++ +++TF G + V+++ VA TAP + V ++VPA+ L +V+ PPVASVT+AYPK +F+ +PL GFG+L+PR MKVR G +
Sbjct: 182 PPPLPYEESIREFVTRHLGEETFERVIDPFVSGVYAGDPDALAMRAALKKIHRLEGLGDFGPGLVSGAINRFKELAQEKKDNPPD---PAWPTYKGGQLGSFRKGLQTLPNAVATELGPDRVKTSWALTSLS--QDGSR-FLATFDTPEG-VKTVRARSVAVTAPTRVVSKV--CVDLVPAAAALDQVYAPPVASVTMAYPKESFKELPGAQPGKPLVGFGHLLPRSMKVRSLGTI 408
BLAST of mRNA_P-wetherbeei_contig16340.1.1 vs. uniprot
Match: R7QII2_CHOCR (Protoporphyrinogen oxidase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QII2_CHOCR) HSP 1 Score: 201 bits (512), Expect = 1.160e-58 Identity = 115/227 (50.66%), Postives = 156/227 (68.72%), Query Frame = 1
Query: 4 PPPRGEEESVKDFVTRHLGSEAFEKLIDPFVSGVYAGDPAKLAMRAALKKVARLELLG-GPGLIDGAILRLQERAREAKALPAPLQADDLPTYAGGALGSFRRGLQSLPRAAAAALGPKRVRTGWTLASVERAQGGAKGYISTFKAGGGATRKVKSKFVACTAPAHRLGAVKGLEEIVPASKRLTEVHYPPVASVTLAYPKTAFRRPLRGFGNLIPRKMKVRESGLV 681
PPP+G EES+KDF+TRHLG+E F+K+IDPFVSGVYAGDP+KL+M AA KK+ L+ LG G+++GAI+R+Q++ +EA P +LPT+ GGALGSFR+GL LP+A A LG RV+ W L S+ + G Y +T++ G T+ V ++ VA TAPA+ + G ++ P K + E++YP V S+TLAYPK FR PL GFGNLIPR M +R G +
Sbjct: 148 PPPKGREESIKDFITRHLGAEVFQKMIDPFVSGVYAGDPSKLSMSAAFKKIYALQELGMTQGIVEGAIIRIQQKKKEA-----PPPDPELPTWKGGALGSFRKGLGMLPQAVAERLGD-RVKLSWKLVSLGKESDGR--YRATYETPEG-TKTVIARSVAITAPANATAGILG--DLAPGIKAIEEINYPTVWSITLAYPKNEFREPLSGFGNLIPRSMGIRTLGTI 363
BLAST of mRNA_P-wetherbeei_contig16340.1.1 vs. uniprot
Match: A0A1L3A3P6_9EUGL (Protoporphyrinogen oxidase (Fragment) n=1 Tax=Lepocinclis tripteris TaxID=135494 RepID=A0A1L3A3P6_9EUGL) HSP 1 Score: 199 bits (507), Expect = 6.640e-58 Identity = 122/236 (51.69%), Postives = 156/236 (66.10%), Query Frame = 1
Query: 4 PPPRGEEESVKDFVTRHLGSEAFEKLIDPFVSGVYAGDPAKLAMRAALKKVARLELLG--GPGLIDGAILRLQERAREAKALPAPLQADDLPTYAGGALGSFRRGLQSLPRAAAAALGPKRVRTGWTLASVERAQGGAKGYISTFKAGGGATRKVKSKFVACTAPAHRLGAVKGLEEIVPASKRLTEVHYPPVASVTLAYPKTAFR--------RPLRGFGNLIPRKMKVRESGLV 681
PPP EESV++FVTRHLG E FE++IDPFVSGVYAGDP +LAMRAALKK+ RLE LG GPGL+ GA+ R +E A+E K P + PTY GG LGSFR+GLQ+LP A A LGP RV+T WTL S+ + +++T+ G T+ V+++ V TAP A K +VPA+ L +V+ PPVASVT+AY K F+ +PL GFG+L+PRKM VR G +
Sbjct: 151 PPPAPYEESVREFVTRHLGPETFERVIDPFVSGVYAGDPDQLAMRAALKKIYRLEGLGDFGPGLVSGAVARFKELAKEKKENPVDPK---WPTYKGGQLGSFRKGLQTLPNAVAKELGPDRVKTAWTLTSLSK---DGNQFLATYNTPEG-TKTVRARSVTVTAPTRV--ASKVCAAVVPAAAELDKVYSPPVASVTMAYRKEWFKELPGAQPGKPLVGFGHLLPRKMGVRSLGTI 377
BLAST of mRNA_P-wetherbeei_contig16340.1.1 vs. uniprot
Match: A0A2V3IR78_9FLOR (Protoporphyrinogen oxidase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IR78_9FLOR) HSP 1 Score: 199 bits (507), Expect = 6.790e-58 Identity = 117/227 (51.54%), Postives = 154/227 (67.84%), Query Frame = 1
Query: 4 PPPRGEEESVKDFVTRHLGSEAFEKLIDPFVSGVYAGDPAKLAMRAALKKVARLELLGGP-GLIDGAILRLQERAREAKALPAPLQADDLPTYAGGALGSFRRGLQSLPRAAAAALGPKRVRTGWTLASVERAQGGAKGYISTFKAGGGATRKVKSKFVACTAPAHRLGAVKGLEEIVPASKRLTEVHYPPVASVTLAYPKTAFRRPLRGFGNLIPRKMKVRESGLV 681
P PRGEE +VK F+TRHLGSE FEK+IDPFVSGVYAGDP+KLAM++A KK+ L LGG G+++G I+R+ ++ RE + P +DLPT+ GGALGSF+ GL LP A LG K ++ W L VERA+ G Y + F+ G TR + +K +A T PA V+ L+ + P L +V+YPPV SV+LAYPK+ F+ PLRGFGNLIPRK+ +R G +
Sbjct: 145 PAPRGEE-TVKQFITRHLGSEVFEKMIDPFVSGVYAGDPSKLAMQSAFKKIFALTKLGGTQGILEGGIIRIGQKKREREQNPPD---EDLPTWKGGALGSFKDGLAMLPNAIQRQLGDK-IKLQWRLVDVERAENGM--YKAVFETPEG-TRDITTKAIAMTTPAG--ATVRALKNLAPGISALEKVYYPPVWSVSLAYPKSEFKEPLRGFGNLIPRKLGIRTLGTI 361 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16340.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig16340.1.1 >prot_P-wetherbeei_contig16340.1.1 ID=prot_P-wetherbeei_contig16340.1.1|Name=mRNA_P-wetherbeei_contig16340.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=227bp APPPRGEEESVKDFVTRHLGSEAFEKLIDPFVSGVYAGDPAKLAMRAALKback to top mRNA from alignment at P-wetherbeei_contig16340:17..1395+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig16340.1.1 ID=mRNA_P-wetherbeei_contig16340.1.1|Name=mRNA_P-wetherbeei_contig16340.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1379bp|location=Sequence derived from alignment at P-wetherbeei_contig16340:17..1395+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig16340:17..1395+ >mRNA_P-wetherbeei_contig16340.1.1 ID=mRNA_P-wetherbeei_contig16340.1.1|Name=mRNA_P-wetherbeei_contig16340.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=681bp|location=Sequence derived from alignment at P-wetherbeei_contig16340:17..1395+ (Phaeothamnion wetherbeei SAG_119_79)back to top |