mRNA_P-wetherbeei_contig16340.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig16340.1.1
Unique NamemRNA_P-wetherbeei_contig16340.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig16340.1.1 vs. uniprot
Match: A0A836C8C9_9STRA (Protoporphyrinogen oxidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8C9_9STRA)

HSP 1 Score: 316 bits (809), Expect = 5.490e-103
Identity = 166/226 (73.45%), Postives = 192/226 (84.96%), Query Frame = 1
Query:    4 PPPRGEEESVKDFVTRHLGSEAFEKLIDPFVSGVYAGDPAKLAMRAALKKVARLELLGGPGLIDGAILRLQERAREAKALPAPLQADDLPTYAGGALGSFRRGLQSLPRAAAAALGPKRVRTGWTLASVERAQGGAKGYISTFKAGGGATRKVKSKFVACTAPAHRLGAVKGLEEIVPASKRLTEVHYPPVASVTLAYPKTAFRRPLRGFGNLIPRKMKVRESGLV 681
            PPPRGEEESV+DFVTRHLG EAFEKLIDPFVSGVYAGDP+KLAM+AALKKV RLE LGGPGLIDGAILRLQERAR+ K LPAPLQA+DLP Y GGALGSF+ GL SLP+AAA ALGPKR+RTGW L+ VE+A+G  +GY+ +F+   G+ R+VK+K V  TAPAHRL AV G++E+VP + +L  V+YPPVASVTLAYPK AFR PL GFG+LIPRKMKVR  G +
Sbjct:  136 PPPRGEEESVRDFVTRHLGREAFEKLIDPFVSGVYAGDPSKLAMKAALKKVGRLEDLGGPGLIDGAILRLQERARQEKELPAPLQAEDLPKYKGGALGSFKDGLVSLPKAAAKALGPKRMRTGWVLSKVEKAEG--EGYMCSFRLADGSVRRVKAKVVCSTAPAHRLVAVDGVKELVPEAAQLENVYYPPVASVTLAYPKEAFRAPLVGFGHLIPRKMKVRTLGTI 359          
BLAST of mRNA_P-wetherbeei_contig16340.1.1 vs. uniprot
Match: D7FU83_ECTSI (Protoporphyrinogen oxidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FU83_ECTSI)

HSP 1 Score: 284 bits (726), Expect = 6.000e-90
Identity = 147/226 (65.04%), Postives = 182/226 (80.53%), Query Frame = 1
Query:    4 PPPRGEEESVKDFVTRHLGSEAFEKLIDPFVSGVYAGDPAKLAMRAALKKVARLELLGGPGLIDGAILRLQERAREAKALPAPLQADDLPTYAGGALGSFRRGLQSLPRAAAAALGPKRVRTGWTLASVERAQGGAKGYISTFKAGGGATRKVKSKFVACTAPAHRLGAVKGLEEIVPASKRLTEVHYPPVASVTLAYPKTAFRRPLRGFGNLIPRKMKVRESGLV 681
            PPP   EESVK+FVTRHLG EAFE+LIDPFVSGVYAGDP+KLA++AALKKVARLE+LGGPGLIDGAILRL+ERAR+ K LP PLQ++DLPTY GG+LGSFR GLQ LP AA  A+G  ++RT W +  ++R++ G  GY+  F    G  +++++K   CTAPAHRL +V+GL +IVP + RL EV+YPPVASVTLAYPK++F+  L GFGNLIPRKMK+R  G +
Sbjct:  187 PPPSDYEESVKEFVTRHLGPEAFERLIDPFVSGVYAGDPSKLAIKAALKKVARLEVLGGPGLIDGAILRLKERARQEKELPEPLQSEDLPTYQGGSLGSFREGLQMLPNAALKAMGKDKMRTSWVMKGIKRSEDG--GYLLAFDTPKG-PKRLQAKVAVCTAPAHRLASVEGLRDIVPEAARLDEVYYPPVASVTLAYPKSSFKVDLTGFGNLIPRKMKIRTLGTI 409          
BLAST of mRNA_P-wetherbeei_contig16340.1.1 vs. uniprot
Match: W7TSK2_9STRA (Protoporphyrinogen oxidase n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TSK2_9STRA)

HSP 1 Score: 231 bits (588), Expect = 1.190e-67
Identity = 130/225 (57.78%), Postives = 163/225 (72.44%), Query Frame = 1
Query:    7 PPRGEEESVKDFVTRHLGSEAFEKLIDPFVSGVYAGDPAKLAMRAALKKVARLELLGGPGLIDGAILRLQERAREAKALPAPLQADDLPTYAGGALGSFRRGLQSLPRAAAAALGPKRVRTGWTLASVERAQGGAKGYISTFKAGGGATRKVKSKFVACTAPAHRLGAVKGLEEIVPASKRLTEVHYPPVASVTLAYPKTAFRRPLRGFGNLIPRKMKVRESGLV 681
            PP+ +EESVK+FVTRHLG+E FE++IDPFVSGVYAGDP+KL+M+AALKKV RLE LGG G++DGA+LR+QE  R       P    + P Y GG LGSF+RGLQS+P A A ALG ++VR    L SV   +G   GY + F+   G  +++K + +A TAPAH +   K L  +VP + RL +V+YPPVASVTLAYPKTAFR PLRGFGNLIPR MK+R  G +
Sbjct:  310 PPKDKEESVKEFVTRHLGAETFERIIDPFVSGVYAGDPSKLSMKAALKKVKRLEELGGRGILDGALLRIQEIQRTK-----PPVVPEHPVYKGGQLGSFKRGLQSMPLAVAKALGKEKVRLSHKLLSVVEGKGPKGGYEAVFQTPQG-RKRIKCQALAITAPAHVVH--KLLRPLVPEAARLADVYYPPVASVTLAYPKTAFREPLRGFGNLIPRSMKIRTLGTI 526          
BLAST of mRNA_P-wetherbeei_contig16340.1.1 vs. uniprot
Match: A0A4D9DG57_9STRA (Protoporphyrinogen oxidase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DG57_9STRA)

HSP 1 Score: 231 bits (589), Expect = 1.670e-67
Identity = 131/223 (58.74%), Postives = 163/223 (73.09%), Query Frame = 1
Query:    7 PPRGEEESVKDFVTRHLGSEAFEKLIDPFVSGVYAGDPAKLAMRAALKKVARLELLGGPGLIDGAILRLQERAREAKALPAPLQADDLPTYAGGALGSFRRGLQSLPRAAAAALGPKRVRTGWTLASVERAQGGAKGYISTFKAGGGATRKVKSKFVACTAPAHRLGAVKGLEEIVPASKRLTEVHYPPVASVTLAYPKTAFRRPLRGFGNLIPRKMKVRESG 675
            PP+ +EESVK+FVTRHLG+E FE++IDPFVSGVYAGDP+KL+M+AALKKV RLE LGG G++DGA+LR+QE  R       P    + P Y GG LGSF+RGLQS+P A A ALG ++VR    L SV   +G   GY + F+   G  ++VK + +A TAPAH +   K L+ +VP + RL +V+YPPVASVTLAYPKTAFR PLRGFGNLIPR MK+R  G
Sbjct:  215 PPKDKEESVKEFVTRHLGAETFERIIDPFVSGVYAGDPSKLSMKAALKKVKRLEELGGRGILDGALLRIQEIQRTK-----PPVVPEHPVYKGGQLGSFKRGLQSMPLAVAKALGKEKVRLSHKLLSVVEGKGPKGGYEAVFQTPQG-RKRVKCQALAITAPAHVVH--KLLQPLVPEAARLADVYYPPVASVTLAYPKTAFREPLRGFGNLIPRSMKIRTLG 429          
BLAST of mRNA_P-wetherbeei_contig16340.1.1 vs. uniprot
Match: A0A7S2Y0E6_9STRA (Protoporphyrinogen oxidase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0E6_9STRA)

HSP 1 Score: 220 bits (561), Expect = 1.570e-65
Identity = 122/226 (53.98%), Postives = 158/226 (69.91%), Query Frame = 1
Query:    7 PPRGEEESVKDFVTRHLGSEAFEKLIDPFVSGVYAGDPAKLAMRAALKKVARLELLGGPGLIDGAILRLQERAREAKALPAPLQADDLPTYAGGALGSFRRGLQSLPRAAAAALGPKRVRTGWTLASVERAQGGAKGYISTFKAGGGATRKVKSKFVACTAPAHRL-GAVKGLEEIVPASKRLTEVHYPPVASVTLAYPKTAFRRPLRGFGNLIPRKMKVRESGLV 681
            PP  EEE+++ FVTRHLG + FE++IDPFVSGVYAGDPAKL+++AALKK+ RLE  GGPG++DGAILR+ E  REA A P       LPTY GG LGSF+ GLQ+LPRA    LG K++RT W +  +E+     + Y++T+    G  + +++K V  T PAH+L   VKG   +VP ++ L +V+YPPVASVTLAYP   F RPL GFGNLIPR  K+R  G +
Sbjct:  178 PPASEEETIEQFVTRHLGRQTFERVIDPFVSGVYAGDPAKLSIKAALKKIKRLEDYGGPGILDGAILRISEMQREAAARPKD---PTLPTYKGGQLGSFKNGLQTLPRAVEKVLGSKKMRTSWKMVDLEKTP--EETYVATYDTPEG-KKMIEAKSVTSTVPAHKLVDIVKG---VVPEAEALNKVYYPPVASVTLAYPIEEFERPLVGFGNLIPRSQKIRTLGTI 394          
BLAST of mRNA_P-wetherbeei_contig16340.1.1 vs. uniprot
Match: A0A1L3A3Q5_9EUGL (Protoporphyrinogen oxidase (Fragment) n=1 Tax=Strombomonas acuminata TaxID=201859 RepID=A0A1L3A3Q5_9EUGL)

HSP 1 Score: 201 bits (512), Expect = 2.370e-59
Identity = 126/237 (53.16%), Postives = 160/237 (67.51%), Query Frame = 1
Query:    1 APPPRGEEESVKDFVTRHLGSEAFEKLIDPFVSGVYAGDPAKLAMRAALKKVARLELLG--GPGLIDGAILRLQERAREAKALPAPLQADDLPTYAGGALGSFRRGLQSLPRAAAAALGPKRVRTGWTLASVERAQGGAKGYISTFKAGGGATRKVKSKFVACTAPAHRLGAVKGLEEIVPASKRLTEVHYPPVASVTLAYPKTAFR--------RPLRGFGNLIPRKMKVRESGLV 681
            +PPP   EES+++FVTRHLG E FE++IDPFVSGVYAGDP +LAMRAALKK+ RLE LG  GPGL+ GAI R +E A+E +  PA       PTY GG LGSFRRGLQ+LP A A  LGP+RV+T W L ++ R   GA  +++TF    G  +KV++K VA TAP      V    ++VPA+  L +V+ PPVASVT+AY K  F+        +PL GFG+L+PRKM VR  G +
Sbjct:  129 SPPPAPYEESIREFVTRHLGEETFERVIDPFVSGVYAGDPDQLAMRAALKKIHRLEGLGDFGPGLVSGAINRFKELAKEKRENPAD---PAWPTYKGGQLGSFRRGLQTLPNAVAKELGPERVKTSWALTALTR--DGAH-FLATFDTPEG-IKKVRAKTVAVTAPTRVTAKV--CADLVPAAAGLDKVYSPPVASVTMAYRKEWFKELPGAKPGQPLVGFGHLLPRKMGVRSLGTI 356          
BLAST of mRNA_P-wetherbeei_contig16340.1.1 vs. uniprot
Match: A0A1L3A3P4_9EUGL (Protoporphyrinogen oxidase (Fragment) n=1 Tax=Euglenaformis proxima TaxID=299110 RepID=A0A1L3A3P4_9EUGL)

HSP 1 Score: 202 bits (515), Expect = 1.020e-58
Identity = 124/236 (52.54%), Postives = 159/236 (67.37%), Query Frame = 1
Query:    4 PPPRGEEESVKDFVTRHLGSEAFEKLIDPFVSGVYAGDPAKLAMRAALKKVARLELLG--GPGLIDGAILRLQERAREAKALPAPLQADDLPTYAGGALGSFRRGLQSLPRAAAAALGPKRVRTGWTLASVERAQGGAKGYISTFKAGGGATRKVKSKFVACTAPAHRLGAVKGLEEIVPASKRLTEVHYPPVASVTLAYPKTAFR--------RPLRGFGNLIPRKMKVRESGLV 681
            PPP   EES+++FVTRHLG E FE++IDPFVSGVYAGDP  LAMRAALKK+ RLE LG  GPGL+ GAI R +E A+E K  P        PTY GG LGSFR+GLQ+LP A A  LGP RV+T W L S+   Q G++ +++TF    G  + V+++ VA TAP   +  V    ++VPA+  L +V+ PPVASVT+AYPK +F+        +PL GFG+L+PR MKVR  G +
Sbjct:  182 PPPLPYEESIREFVTRHLGEETFERVIDPFVSGVYAGDPDALAMRAALKKIHRLEGLGDFGPGLVSGAINRFKELAQEKKDNPPD---PAWPTYKGGQLGSFRKGLQTLPNAVATELGPDRVKTSWALTSLS--QDGSR-FLATFDTPEG-VKTVRARSVAVTAPTRVVSKV--CVDLVPAAAALDQVYAPPVASVTMAYPKESFKELPGAQPGKPLVGFGHLLPRSMKVRSLGTI 408          
BLAST of mRNA_P-wetherbeei_contig16340.1.1 vs. uniprot
Match: R7QII2_CHOCR (Protoporphyrinogen oxidase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QII2_CHOCR)

HSP 1 Score: 201 bits (512), Expect = 1.160e-58
Identity = 115/227 (50.66%), Postives = 156/227 (68.72%), Query Frame = 1
Query:    4 PPPRGEEESVKDFVTRHLGSEAFEKLIDPFVSGVYAGDPAKLAMRAALKKVARLELLG-GPGLIDGAILRLQERAREAKALPAPLQADDLPTYAGGALGSFRRGLQSLPRAAAAALGPKRVRTGWTLASVERAQGGAKGYISTFKAGGGATRKVKSKFVACTAPAHRLGAVKGLEEIVPASKRLTEVHYPPVASVTLAYPKTAFRRPLRGFGNLIPRKMKVRESGLV 681
            PPP+G EES+KDF+TRHLG+E F+K+IDPFVSGVYAGDP+KL+M AA KK+  L+ LG   G+++GAI+R+Q++ +EA     P    +LPT+ GGALGSFR+GL  LP+A A  LG  RV+  W L S+ +   G   Y +T++   G T+ V ++ VA TAPA+    + G  ++ P  K + E++YP V S+TLAYPK  FR PL GFGNLIPR M +R  G +
Sbjct:  148 PPPKGREESIKDFITRHLGAEVFQKMIDPFVSGVYAGDPSKLSMSAAFKKIYALQELGMTQGIVEGAIIRIQQKKKEA-----PPPDPELPTWKGGALGSFRKGLGMLPQAVAERLGD-RVKLSWKLVSLGKESDGR--YRATYETPEG-TKTVIARSVAITAPANATAGILG--DLAPGIKAIEEINYPTVWSITLAYPKNEFREPLSGFGNLIPRSMGIRTLGTI 363          
BLAST of mRNA_P-wetherbeei_contig16340.1.1 vs. uniprot
Match: A0A1L3A3P6_9EUGL (Protoporphyrinogen oxidase (Fragment) n=1 Tax=Lepocinclis tripteris TaxID=135494 RepID=A0A1L3A3P6_9EUGL)

HSP 1 Score: 199 bits (507), Expect = 6.640e-58
Identity = 122/236 (51.69%), Postives = 156/236 (66.10%), Query Frame = 1
Query:    4 PPPRGEEESVKDFVTRHLGSEAFEKLIDPFVSGVYAGDPAKLAMRAALKKVARLELLG--GPGLIDGAILRLQERAREAKALPAPLQADDLPTYAGGALGSFRRGLQSLPRAAAAALGPKRVRTGWTLASVERAQGGAKGYISTFKAGGGATRKVKSKFVACTAPAHRLGAVKGLEEIVPASKRLTEVHYPPVASVTLAYPKTAFR--------RPLRGFGNLIPRKMKVRESGLV 681
            PPP   EESV++FVTRHLG E FE++IDPFVSGVYAGDP +LAMRAALKK+ RLE LG  GPGL+ GA+ R +E A+E K  P   +    PTY GG LGSFR+GLQ+LP A A  LGP RV+T WTL S+ +       +++T+    G T+ V+++ V  TAP     A K    +VPA+  L +V+ PPVASVT+AY K  F+        +PL GFG+L+PRKM VR  G +
Sbjct:  151 PPPAPYEESVREFVTRHLGPETFERVIDPFVSGVYAGDPDQLAMRAALKKIYRLEGLGDFGPGLVSGAVARFKELAKEKKENPVDPK---WPTYKGGQLGSFRKGLQTLPNAVAKELGPDRVKTAWTLTSLSK---DGNQFLATYNTPEG-TKTVRARSVTVTAPTRV--ASKVCAAVVPAAAELDKVYSPPVASVTMAYRKEWFKELPGAQPGKPLVGFGHLLPRKMGVRSLGTI 377          
BLAST of mRNA_P-wetherbeei_contig16340.1.1 vs. uniprot
Match: A0A2V3IR78_9FLOR (Protoporphyrinogen oxidase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IR78_9FLOR)

HSP 1 Score: 199 bits (507), Expect = 6.790e-58
Identity = 117/227 (51.54%), Postives = 154/227 (67.84%), Query Frame = 1
Query:    4 PPPRGEEESVKDFVTRHLGSEAFEKLIDPFVSGVYAGDPAKLAMRAALKKVARLELLGGP-GLIDGAILRLQERAREAKALPAPLQADDLPTYAGGALGSFRRGLQSLPRAAAAALGPKRVRTGWTLASVERAQGGAKGYISTFKAGGGATRKVKSKFVACTAPAHRLGAVKGLEEIVPASKRLTEVHYPPVASVTLAYPKTAFRRPLRGFGNLIPRKMKVRESGLV 681
            P PRGEE +VK F+TRHLGSE FEK+IDPFVSGVYAGDP+KLAM++A KK+  L  LGG  G+++G I+R+ ++ RE +  P     +DLPT+ GGALGSF+ GL  LP A    LG K ++  W L  VERA+ G   Y + F+   G TR + +K +A T PA     V+ L+ + P    L +V+YPPV SV+LAYPK+ F+ PLRGFGNLIPRK+ +R  G +
Sbjct:  145 PAPRGEE-TVKQFITRHLGSEVFEKMIDPFVSGVYAGDPSKLAMQSAFKKIFALTKLGGTQGILEGGIIRIGQKKREREQNPPD---EDLPTWKGGALGSFKDGLAMLPNAIQRQLGDK-IKLQWRLVDVERAENGM--YKAVFETPEG-TRDITTKAIAMTTPAG--ATVRALKNLAPGISALEKVYYPPVWSVSLAYPKSEFKEPLRGFGNLIPRKLGIRTLGTI 361          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16340.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836C8C9_9STRA5.490e-10373.45Protoporphyrinogen oxidase n=1 Tax=Tribonema minus... [more]
D7FU83_ECTSI6.000e-9065.04Protoporphyrinogen oxidase n=2 Tax=Ectocarpus TaxI... [more]
W7TSK2_9STRA1.190e-6757.78Protoporphyrinogen oxidase n=2 Tax=Nannochloropsis... [more]
A0A4D9DG57_9STRA1.670e-6758.74Protoporphyrinogen oxidase n=1 Tax=Nannochloropsis... [more]
A0A7S2Y0E6_9STRA1.570e-6553.98Protoporphyrinogen oxidase n=1 Tax=Fibrocapsa japo... [more]
A0A1L3A3Q5_9EUGL2.370e-5953.16Protoporphyrinogen oxidase (Fragment) n=1 Tax=Stro... [more]
A0A1L3A3P4_9EUGL1.020e-5852.54Protoporphyrinogen oxidase (Fragment) n=1 Tax=Eugl... [more]
R7QII2_CHOCR1.160e-5850.66Protoporphyrinogen oxidase n=1 Tax=Chondrus crispu... [more]
A0A1L3A3P6_9EUGL6.640e-5851.69Protoporphyrinogen oxidase (Fragment) n=1 Tax=Lepo... [more]
A0A2V3IR78_9FLOR6.790e-5851.54Protoporphyrinogen oxidase n=1 Tax=Gracilariopsis ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16340contigP-wetherbeei_contig16340:17..1395 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FU83
PFAMsAmino_oxidase,NAD_binding_8
Model size681
Max annot lvl2759|Eukaryota
KEGG rclassRC00885
KEGG koko:K00231
KEGG ReactionR03222,R04178
KEGG Pathwayko00860,ko01100,ko01110,map00860,map01100,map01110
KEGG ModuleM00121
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004729,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0006928,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016491,GO:0016627,GO:0016634,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0040011,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046483,GO:0048870,GO:0051179,GO:0051186,GO:0051188,GO:0051674,GO:0055114,GO:0070818,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
Exons3
Evalue9.84e-91
EggNOG OGsCOG1232@1|root,KOG1276@2759|Eukaryota
EC1.3.3.15,1.3.3.4
DescriptionCatalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
Cds size681
COG categoryH
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186084.0163193-CDS-P-wetherbeei_contig16340:16..1691683186084.0163193-CDS-P-wetherbeei_contig16340:16..169Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16340 17..169 +
1683186084.0276191-CDS-P-wetherbeei_contig16340:592..9791683186084.0276191-CDS-P-wetherbeei_contig16340:592..979Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16340 593..979 +
1683186084.0356493-CDS-P-wetherbeei_contig16340:1254..13951683186084.0356493-CDS-P-wetherbeei_contig16340:1254..1395Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16340 1255..1395 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16340.1.1prot_P-wetherbeei_contig16340.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig16340 17..1395 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig16340.1.1

>prot_P-wetherbeei_contig16340.1.1 ID=prot_P-wetherbeei_contig16340.1.1|Name=mRNA_P-wetherbeei_contig16340.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=227bp
APPPRGEEESVKDFVTRHLGSEAFEKLIDPFVSGVYAGDPAKLAMRAALK
KVARLELLGGPGLIDGAILRLQERAREAKALPAPLQADDLPTYAGGALGS
FRRGLQSLPRAAAAALGPKRVRTGWTLASVERAQGGAKGYISTFKAGGGA
TRKVKSKFVACTAPAHRLGAVKGLEEIVPASKRLTEVHYPPVASVTLAYP
KTAFRRPLRGFGNLIPRKMKVRESGLV
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mRNA from alignment at P-wetherbeei_contig16340:17..1395+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig16340.1.1 ID=mRNA_P-wetherbeei_contig16340.1.1|Name=mRNA_P-wetherbeei_contig16340.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1379bp|location=Sequence derived from alignment at P-wetherbeei_contig16340:17..1395+ (Phaeothamnion wetherbeei SAG_119_79)
GCGCCGCCGCCGCGGGGCGAGGAGGAGTCCGTGAAGGACTTTGTGACGCG GCACCTCGGCAGCGAAGCCTTCGAAAAGCTCATCGACCCCTTCGTGTCAG GCGTCTACGCCGGTGACCCGGCCAAGCTTGCGATGCGGGCCGCGCTCAAG AAGGTGCGGTGCGGTCCTTTCGGTTTTGTTTTTCGTGTACGGTGTCGGTT GCTCCCTTCTTTCTGTGTTTCTTCCCCAGGTCTTGCGGAAGAGGCTTTCC TGATCTGTTTGTGACAACTTTTGGGTGTTTCGCGCGTGTCGGGGACGCCG TGCCGCGCTTGAGAAATTATGTTGTGCTGGTGCTGTGCTAATGAATTTGC TGGGAAGAATGCGGCATGGGGATGTGTCATGCCTGTTATTGATGCACGTC GCTGATCTTGCGGTCGTATGGTTTCTTAACGGTCGCTGATAGCCAGGAAC GCTTCACTCGTTTTAACCCTCGTCATCCCAGTGGTCCTTGTTGCTCCGCC CCTTTCGCTCCATTGGTCTCGCTCTTGTCTTCGCTTCCGCCCTTGCGCCA TCACCTTCTCGCCGCCACTACGCCAGGTGGCGCGCCTGGAGCTGCTGGGC GGCCCCGGCCTCATCGATGGCGCCATTCTCCGCCTCCAAGAGCGCGCCCG CGAGGCCAAAGCCCTCCCGGCGCCGCTCCAGGCTGACGACCTGCCTACCT ACGCCGGCGGCGCCCTCGGCTCGTTCCGGCGAGGCTTGCAGTCGCTGCCG CGCGCCGCAGCCGCCGCGCTCGGCCCGAAGCGCGTACGCACGGGGTGGAC GCTGGCGTCGGTGGAACGGGCGCAGGGTGGTGCCAAGGGTTACATTTCGA CGTTCAAGGCAGGCGGCGGGGCGACGCGGAAAGTGAAGTCCAAATTCGTG GCGTGCACGGCGCCGGCGCACCGCCTGGGGGCGGTCAAGGGGCTGGAGGA GATTGTGCCGGCGGTGAGTGCGGTGGGCGGTGTGGTCGGGAATTGTCCTC CTTGTTGGGGTCCGAGTTTCAGGAGCTTTTCTTTTCAACGCCCTCTGGCC CGGTTGGCTGCGAGCGCCGCATGTCCCAGTCTCCCCCCCCCCAAGTTGTT CACTGCTCACGAGAAACGTAGAGCATTTCTCGATCTATTTCGACTCGTGT GATGAGATTCTGCCCCTTCTTTTCCCTCGTCGACAGTCTTCTCAAAATAT CTCTCCCTCCACGTCATTCGTGCTTTCCGCTTCTGCAGTCTAAGCGGTTG ACCGAGGTGCACTACCCGCCGGTGGCGTCGGTGACGCTGGCCTACCCGAA GACGGCGTTCCGGCGGCCGCTGCGGGGCTTCGGAAACCTCATCCCCCGCA AGATGAAGGTGCGAGAGTCCGGGCTTGTA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig16340:17..1395+

>mRNA_P-wetherbeei_contig16340.1.1 ID=mRNA_P-wetherbeei_contig16340.1.1|Name=mRNA_P-wetherbeei_contig16340.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=681bp|location=Sequence derived from alignment at P-wetherbeei_contig16340:17..1395+ (Phaeothamnion wetherbeei SAG_119_79)
GCGCCGCCGCCGCGGGGCGAGGAGGAGTCCGTGAAGGACTTTGTGACGCG
GCACCTCGGCAGCGAAGCCTTCGAAAAGCTCATCGACCCCTTCGTGTCAG
GCGTCTACGCCGGTGACCCGGCCAAGCTTGCGATGCGGGCCGCGCTCAAG
AAGGTGGCGCGCCTGGAGCTGCTGGGCGGCCCCGGCCTCATCGATGGCGC
CATTCTCCGCCTCCAAGAGCGCGCCCGCGAGGCCAAAGCCCTCCCGGCGC
CGCTCCAGGCTGACGACCTGCCTACCTACGCCGGCGGCGCCCTCGGCTCG
TTCCGGCGAGGCTTGCAGTCGCTGCCGCGCGCCGCAGCCGCCGCGCTCGG
CCCGAAGCGCGTACGCACGGGGTGGACGCTGGCGTCGGTGGAACGGGCGC
AGGGTGGTGCCAAGGGTTACATTTCGACGTTCAAGGCAGGCGGCGGGGCG
ACGCGGAAAGTGAAGTCCAAATTCGTGGCGTGCACGGCGCCGGCGCACCG
CCTGGGGGCGGTCAAGGGGCTGGAGGAGATTGTGCCGGCGTCTAAGCGGT
TGACCGAGGTGCACTACCCGCCGGTGGCGTCGGTGACGCTGGCCTACCCG
AAGACGGCGTTCCGGCGGCCGCTGCGGGGCTTCGGAAACCTCATCCCCCG
CAAGATGAAGGTGCGAGAGTCCGGGCTTGTA
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