mRNA_P-wetherbeei_contig1631.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1631.4.1
Unique NamemRNA_P-wetherbeei_contig1631.4.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1631.4.1 vs. uniprot
Match: A0A3C0TT54_9PROT (Transglut_core2 domain-containing protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TT54_9PROT)

HSP 1 Score: 360 bits (925), Expect = 1.810e-122
Identity = 188/290 (64.83%), Postives = 223/290 (76.90%), Query Frame = 1
Query:    1 MDKNTPPENPSVSDTPDGNPLWETLRAAGRASDDDLDVASVALALAALDCPDRELAAYAAHLAEIGAAVASGCADAGHIDARADVLAQVISQQFGYAGDQASYNDMQNANLMQVIDRRRGLPVALGLLYIIAARAQGWACAGLNFPGHFLIRLELGSARRILDPFNGGVKMEIPQLRSLLKGMAGEGAELKPEYYQPVSNRDVLLRLLNNIKGRAFQSNDFIRASGILHRMRMISPAAAHLGYEHGMVHARLGNVPEALSAMRACIDHALDPKLQKMAELALQQLRLKMN 870
            MD+  P       + P+    +  L+ AG A D+D+D+A  ALALA LDC DR  A Y  HLA I +AV   C  A  IDARA  LA VI+ QFGYAGDQ +Y+DMQNANL++VIDRR+GLPVA+ +LYI+AARAQGW CAGLNFPGHFLIRLELG+ARRILDPFNGG  +EI QLR LLK +AGEGAEL+PE+YQP+SNRD+LLRLLNNIKGRA  + D  RA+GIL RMRMISP  A+L YEHG VHARLGNVPEA+ AM AC + A D +L++ AE AL+QLRL+MN
Sbjct:    1 MDQKKPHSLHIPQNEPELQAYYAVLQTAGEARDEDMDLAGAALALALLDCQDRSAAPYHEHLAAIASAVGGACPVAEDIDARAAALATVIAGQFGYAGDQENYHDMQNANLIRVIDRRKGLPVAISILYILAARAQGWDCAGLNFPGHFLIRLELGNARRILDPFNGGQVVEIAQLRGLLKDVAGEGAELRPEHYQPISNRDMLLRLLNNIKGRAIHAGDLPRAAGILLRMRMISPGTAYLSYEHGAVHARLGNVPEAVEAMTACAEQAEDARLRQYAEQALKQLRLQMN 290          
BLAST of mRNA_P-wetherbeei_contig1631.4.1 vs. uniprot
Match: A0A351T6J1_9PROT (Transglut_core2 domain-containing protein n=3 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A351T6J1_9PROT)

HSP 1 Score: 272 bits (696), Expect = 9.680e-88
Identity = 148/271 (54.61%), Postives = 183/271 (67.53%), Query Frame = 1
Query:   61 LWETLRAAGRASDDD-LDVASVALALAALDCPDRELAAYAAHLAEIGAAVASGCADAGHIDARADVLAQVISQQFGYAGDQASYNDMQNANLMQVIDRRRGLPVALGLLYIIAARAQGWACAGLNFPGHFLIRLELGSARRILDPFNGGVKMEIPQLRSLLKGMAGEGAELKPEYYQPVSNRDVLLRLLNNIKGRAFQSNDFIRASGILHRMRMISPAAAHLGYEHGMVHARLGNVPEALSAMRACIDHALDPKLQKMAELALQQLRLKMN 870
            L   LRA G A+ D  LD+ S  LALAALD PD  L  Y AHL E+  AVA+ C D   + ARA  L+  ++QQ+GY GD  +Y DM+NA+L+QVI+RR+GLPVAL LLYI AAR QGW C G+NFP HFLIRL LG+ R ILDPFNGG  +    LR LLK   G  AELKP +Y+PVS+  +LLRLLNNIK RA  + D  R   IL RM +I+P  A + +E GMV AR G++  A+ +M  C  HA DPKL+K AE+AL +LR  +N
Sbjct:   19 LLAMLRAVGNAAPDQGLDLGSAGLALAALDAPDTPLFPYYAHLQELNRAVAANCTDPDDLTARAAALSATLAQQYGYQGDWENYEDMRNADLIQVIERRKGLPVALALLYITAARGQGWHCEGINFPSHFLIRLSLGAERCILDPFNGGKILAPNDLRDLLKYFGGGEAELKPHFYEPVSDHALLLRLLNNIKARAVAAQDLARTDEILTRMLLIAPKEAIMWHEQGMVRARRGDIGGAIESMGQCKTHAQDPKLKKFAEIALDKLRQHLN 289          
BLAST of mRNA_P-wetherbeei_contig1631.4.1 vs. uniprot
Match: A0A6N7F6L6_9PROT (Tetratricopeptide repeat protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6N7F6L6_9PROT)

HSP 1 Score: 248 bits (632), Expect = 3.260e-78
Identity = 142/272 (52.21%), Postives = 182/272 (66.91%), Query Frame = 1
Query:   61 LWETLRAAGRASDDDLDVASVALALAALDCPDRELAAYAAHLAEIGAAVASGC-ADAGH-IDARADVLAQVISQQFGYAGDQASYNDMQNANLMQVIDRRRGLPVALGLLYIIAARAQGWACAGLNFPGHFLIRLELGSARRILDPFNGGVKMEIPQLRSLLKGMAGEGAELKPEYYQPVSNRDVLLRLLNNIKGRAFQSNDFIRASGILHRMRMISPAAAHLGYEHGMVHARLGNVPEALSAMRACIDHALDPKLQKMAELALQQLRLKMN 870
            + + L A G   DD +D+A  AL LAALD P     +Y AHL EI AAVA+   A A H +  RA  LA  +  + GYAGD  +Y D QNANLM+VIDRR+GLPVALG+LY+ AARAQGW  AGLNFPGHFL+RLE G  R I+DPFNGG +M    +R +LK +AG  AEL+PE+Y P  +RDVL+RLL+NIK RA Q++D  RA  I+ R+ +I+P    L  E G+ HARLGN+  A  A+ A +  + D  ++  AE  LQQLR ++N
Sbjct:    7 IRDELAAVGGLEDDAIDIARTALLLAALDRPGVSRDSYHAHLDEIAAAVAARVPAGARHNLARRAGALAAALGGEMGYAGDTLTYEDPQNANLMRVIDRRKGLPVALGILYLHAARAQGWDAAGLNFPGHFLVRLERGPVRVIIDPFNGGREMAAEDMRGVLKTVAGAEAELRPEHYAPTGSRDVLVRLLSNIKLRAAQTDDAARALEIIDRILLIAPGQTALLREAGLFHARLGNLKSAQEALVAFLGRSGDAAMRAEAEKLLQQLRTRLN 278          
BLAST of mRNA_P-wetherbeei_contig1631.4.1 vs. uniprot
Match: A0A7C7KMI0_9PROT (Tetratricopeptide repeat protein n=1 Tax=Kiloniellaceae bacterium TaxID=2480820 RepID=A0A7C7KMI0_9PROT)

HSP 1 Score: 233 bits (593), Expect = 3.050e-72
Identity = 137/270 (50.74%), Postives = 177/270 (65.56%), Query Frame = 1
Query:   73 LRAAGRASDDDLDVASVALALAALDCPDRELAAYAAHLAEIGAAVASGCADAG---HIDARADVLAQVISQQFGYAGDQASYNDMQNANLMQVIDRRRGLPVALGLLYIIAARAQGWACAGLNFPGHFLIRLELGSARRILDPFNGGVKMEIPQLRSLLKGMAGEGAELKPEYYQPVSNRDVLLRLLNNIKGRAFQSNDFIRASGILHRMRMISPAAAHLGYEHGMVHARLGNVPEALSAMRACIDHA-LDPKLQKMAELALQQLRLKMN 870
            LR  G  +DD++DVA  AL LAAL+ P   L  Y  HL+ +        A  G    +DAR  VL QV+ +++GY GD+ SY+D+ NANLM+VIDRRRGLPVALG+LYI AARAQGWA  GLNFPGHF++RL+LGS R I+DPFNGG   +   LRSL+K +AG+ AEL+PE+   V NRD+LLRL NNIK R  Q      A  ++  M M +P  A L  E G++H+ L N+  A+ A    ++ A  DP  Q +A L LQQLR+K+N
Sbjct:   16 LRQLGGQTDDEIDVAGAALLLAALERPQVGLERYYHHLSLLARDTEDLAARRGAERDLDARIAVLNQVMVERYGYQGDRQSYDDLHNANLMRVIDRRRGLPVALGILYIHAARAQGWAICGLNFPGHFMLRLDLGSQRAIIDPFNGGEIRDAAALRSLMKTVAGKEAELRPEHTDRVGNRDILLRLQNNIKLRLIQQERSADALEVIETMLMFAPEKAALWKEAGVLHSHLDNMRAAIMAFEHYLELAGPDPDRQNIAAL-LQQLRIKLN 284          
BLAST of mRNA_P-wetherbeei_contig1631.4.1 vs. uniprot
Match: A0A2E5KTN0_9PROT (Transglut_core2 domain-containing protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2E5KTN0_9PROT)

HSP 1 Score: 231 bits (590), Expect = 5.080e-72
Identity = 125/266 (46.99%), Postives = 170/266 (63.91%), Query Frame = 1
Query:   73 LRAAGRASDDDLDVASVALALAALDCPDRELAAYAAHLAEIGAAVASGCADAGHIDARADVLAQVISQQFGYAGDQASYNDMQNANLMQVIDRRRGLPVALGLLYIIAARAQGWACAGLNFPGHFLIRLELGSARRILDPFNGGVKMEIPQLRSLLKGMAGEGAELKPEYYQPVSNRDVLLRLLNNIKGRAFQSNDFIRASGILHRMRMISPAAAHLGYEHGMVHARLGNVPEALSAMRACIDHALDPKLQKMAELALQQLRLKMN 870
            L AAG  +D+D+D+A  ALALAALD P   L  Y  HL E+   +A     A   + RA VL +V+   +GY GD A+Y+D+QNANLM+VIDRRRGLPVALG+LYI  ARAQGW   G+NFPGHFL+R+E    R ILDPF  G ++E   LR L K +AGE AEL+  ++  V NR++LLRL NNIK RA +S D +RA+ +L  M  I+P   +  YE G++ A+  N+  A++A+   +  +     +  A   +Q+L  K+N
Sbjct:    2 LAAAGVCTDEDVDLALTALALAALDRPRVSLDRYRRHLQELADDIARRAGGAVSAEDRAAVLGEVLGNDYGYEGDLATYDDLQNANLMRVIDRRRGLPVALGILYIHGARAQGWPMVGINFPGHFLLRMECEGERVILDPFEPGRRLEANDLRELFKRLAGEDAELETRFFDAVGNREILLRLQNNIKSRALRSGDVVRAAAVLKSMIRIAPDHVYAWYELGLLEAQADNLRAAITALETFLSKSAHDAARHHAATLIQELHAKLN 267          
BLAST of mRNA_P-wetherbeei_contig1631.4.1 vs. uniprot
Match: A0A537S069_9PROT (Tetratricopeptide repeat protein n=3 Tax=unclassified Alphaproteobacteria TaxID=33807 RepID=A0A537S069_9PROT)

HSP 1 Score: 232 bits (591), Expect = 5.750e-72
Identity = 130/266 (48.87%), Postives = 167/266 (62.78%), Query Frame = 1
Query:   73 LRAAGRASDDDLDVASVALALAALDCPDRELAAYAAHLAEIGAAVASGCADAGHIDARADVLAQVISQQFGYAGDQASYNDMQNANLMQVIDRRRGLPVALGLLYIIAARAQGWACAGLNFPGHFLIRLELGSARRILDPFNGGVKMEIPQLRSLLKGMAGEGAELKPEYYQPVSNRDVLLRLLNNIKGRAFQSNDFIRASGILHRMRMISPAAAHLGYEHGMVHARLGNVPEALSAMRACIDHALDPKLQKMAELALQQLRLKMN 870
            LR  G A+   L +   ALALA+ + P   L  Y  HLA +   V      AG + ARA  L ++I  + GY+GD+ +Y+D+QN NLM+V+DRR+GLPVALG+LY+ AARAQGW   GL FPGHFLIRL  G  R ILDPF+GG   E   LR LLK  AG+  EL PE+Y PVS+RDVLLRL NN+K R  Q+     A  I+  M M++P  A L YE GM+HARLGN+  ++ A+   +  A D   +  A   LQQL+ K+N
Sbjct:   17 LRELGAATSPILPIGEAALALASFERPRVGLGRYRQHLAALARDVGRHAGAAGDLTARAQALNEIILLKHGYSGDELTYDDLQNGNLMRVVDRRKGLPVALGILYLHAARAQGWESVGLAFPGHFLIRLGDGPERLILDPFHGGQICEAAMLRELLKATAGQEVELTPEHYAPVSDRDVLLRLQNNVKSRLLQAGRQEHALRIIDTMLMLAPDLAELWYESGMLHARLGNMIASVGALEEFVRRAPDGIARHQAAAVLQQLKSKLN 282          
BLAST of mRNA_P-wetherbeei_contig1631.4.1 vs. uniprot
Match: A0A3S0WWE0_9PROT (Tetratricopeptide repeat protein n=2 Tax=Azospirillum doebereinerae TaxID=92933 RepID=A0A3S0WWE0_9PROT)

HSP 1 Score: 231 bits (589), Expect = 9.850e-72
Identity = 126/269 (46.84%), Postives = 175/269 (65.06%), Query Frame = 1
Query:   67 ETLRAAGRASDDDLDVASVALALAALDCPDRELAAYAAHLAEIGAAVASGC-ADAGHIDARADVLAQVISQQFGYAGDQASYNDMQNANLMQVIDRRRGLPVALGLLYIIAARAQGWACAGLNFPGHFLIRLELGSARRILDPFNGGVKMEIPQLRSLLKGMAGEGAELKPEYYQPVSNRDVLLRLLNNIKGRAFQSNDFIRASGILHRMRMISPAAAHLGYEHGMVHARLGNVPEALSAMRACIDHALDPKLQKMAELALQQLRLKMN 870
            E LR  G   DD++D+A  ALAL AL+ P+ +L  Y  H+  I A +A    ADA  ++ R   L  VI ++ GY+GD  +Y+D+QNAN+++VIDRRRGLPVALG+LY+ AAR++GWA  GLNFPGHFL+R++ G  R I+DPFN G    +  LR LLK  AG  AEL+PE+YQPVSNRDVLLRL NNIK R   ++D  +A  +L  MR+ +P    L  E G++ A  GN+ +A++A+   +    D   +      +QQL+ ++N
Sbjct:    9 EILRRTGDLPDDEIDLAEAALALGALERPNTDLGGYRRHIQAIVADLAERADADADGLEDRIASLHAVIGERHGYSGDHDTYDDLQNANMLRVIDRRRGLPVALGILYLHAARSRGWAMVGLNFPGHFLVRIDKGPVRAIIDPFNEGQVRTVVDLRDLLKATAGSAAELEPEHYQPVSNRDVLLRLQNNIKLRHLSAHDVPKALEVLSGMRLFAPHEPALWRETGLLEAHAGNLKDAITALETFMALTGDEHHRHQTASLIQQLKKRLN 277          
BLAST of mRNA_P-wetherbeei_contig1631.4.1 vs. uniprot
Match: A0A418VW83_9PROT (Transglut_core2 domain-containing protein n=1 Tax=Azospirillum cavernae TaxID=2320860 RepID=A0A418VW83_9PROT)

HSP 1 Score: 231 bits (589), Expect = 1.080e-71
Identity = 128/272 (47.06%), Postives = 176/272 (64.71%), Query Frame = 1
Query:   67 ETLRAAGRASDDDLDVASVALALAALDCPDRELAAYAAHLAEIGAAVASGCADA----GHIDARADVLAQVISQQFGYAGDQASYNDMQNANLMQVIDRRRGLPVALGLLYIIAARAQGWACAGLNFPGHFLIRLELGSARRILDPFNGGVKMEIPQLRSLLKGMAGEGAELKPEYYQPVSNRDVLLRLLNNIKGRAFQSNDFIRASGILHRMRMISPAAAHLGYEHGMVHARLGNVPEALSAMRACIDHALDPKLQKMAELALQQLRLKMN 870
            E LR  G   DD +++A  ALALAALD    +L  Y  H+  I A +A    DA      ++AR  +L QVI ++ GY+GD  +Y+D+QNAN+M+VIDRRRGLPVALG+LY+ AAR+QGW+  GLNFPGHFL+R++LGSAR I+DPFN G    +  LR LLK  AG  AEL P++YQPV+NRDVLLRL NNIK R   ++D  +A  IL  MR+ +P    L  E G++ A  G + +A++A+   +  + D   +      +Q L+ ++N
Sbjct:    9 EILRQIGDQPDDAINLAEAALALAALDVSTADLTGYRRHIQAIVADLAERVDDAFREADSLEARIALLHQVIGERHGYSGDHDTYDDLQNANMMRVIDRRRGLPVALGILYMHAARSQGWSIVGLNFPGHFLVRVDLGSARAIIDPFNEGQVRSVVDLRDLLKATAGSAAELSPDHYQPVANRDVLLRLQNNIKLRHLSAHDIPKALEILEGMRLFAPHEPALWRETGLLEAHTGKLADAITALETFMALSGDEHQRHQTASLIQTLKKRLN 280          
BLAST of mRNA_P-wetherbeei_contig1631.4.1 vs. uniprot
Match: A0A1X7PV25_AZOLI (Regulator of sirC expression, contains transglutaminase-like and TPR domains n=2 Tax=Azospirillum TaxID=191 RepID=A0A1X7PV25_AZOLI)

HSP 1 Score: 231 bits (588), Expect = 1.390e-71
Identity = 126/269 (46.84%), Postives = 176/269 (65.43%), Query Frame = 1
Query:   67 ETLRAAGRASDDDLDVASVALALAALDCPDRELAAYAAHLAEIGAAVASGCA-DAGHIDARADVLAQVISQQFGYAGDQASYNDMQNANLMQVIDRRRGLPVALGLLYIIAARAQGWACAGLNFPGHFLIRLELGSARRILDPFNGGVKMEIPQLRSLLKGMAGEGAELKPEYYQPVSNRDVLLRLLNNIKGRAFQSNDFIRASGILHRMRMISPAAAHLGYEHGMVHARLGNVPEALSAMRACIDHALDPKLQKMAELALQQLRLKMN 870
            E LR  G   DD++D+A  ALAL AL+ P+ +L  Y  H+  I   +A+  A D   +D+R + L +VI ++ GY+GD  +Y+D+QNANL++VIDRRRGLPVALG+LY+ AAR+QGW+  GLNFPGHFL+R++ G AR I+DPFN G    +  LR LLK  AG  AEL+PE+YQPVSNRDVLLRL NNIK R   ++   +A  +L  MR+ +P    L  E G++ A  GN+ +A+ A+   +    D   +      +QQL+ ++N
Sbjct:    9 EILRRTGDQPDDEIDLAEAALALGALEMPNSDLDGYRRHIRAIVEDMAAQDAPDGDSLDSRIERLRRVIGERHGYSGDHDTYDDLQNANLLRVIDRRRGLPVALGILYMHAARSQGWSMVGLNFPGHFLVRIDQGPARAIVDPFNDGQIRTVVDLRDLLKATAGSAAELEPEHYQPVSNRDVLLRLQNNIKLRHLSAHAVPKALEVLEGMRLFAPHEPALWRETGLLEAHTGNIRDAIVALETFMALTGDEHHRMQTASLIQQLKKRLN 277          
BLAST of mRNA_P-wetherbeei_contig1631.4.1 vs. uniprot
Match: A0A2U1WQJ2_9PROT (Transglut_core2 domain-containing protein n=1 Tax=Azospirillum sp. TSO22-1 TaxID=716789 RepID=A0A2U1WQJ2_9PROT)

HSP 1 Score: 230 bits (587), Expect = 1.970e-71
Identity = 129/274 (47.08%), Postives = 176/274 (64.23%), Query Frame = 1
Query:   67 ETLRAAGRASDDDLDVASVALALAALDCPDRELAAYAAHLAEIGAAVASGC-ADAGHIDARADVLAQVISQQFGYAGDQASYNDMQNANLMQVIDRRRGLPVALGLLYIIAARAQGWACAGLNFPGHFLIRLELGSARRILDPFNGGVKMEIPQLRSLLKGMAGEGAELKPEYYQPVSNRDVLLRLLNNIKGRAFQSNDFIRASGILHRMRMISPAAAHLGYEHGMVHARLGNVPEALSAMRACI-----DHALDPKLQKMAELALQQLRLKMN 870
            E LR  G  SD D+D+A  ALAL ALD PD+ L  Y  HLA +   +A     DA  +++R  +L +V+  + GY+GD  +Y+D+QNANL++VIDRR+GLPVALG+LY+ AAR+ GW   GLNFPGHFL+RLE+   R ILDPFNGG    +  LR L+K  AG  AEL+P YYQ V NRD+LLRL NN+K R   +ND  +A  +L  MR+++P    L  E G++ A  GN+ EA++A+   +     DH L       A + +QQL+ ++N
Sbjct:    9 EILRRIGAQSDGDIDLAEGALALGALDRPDQPLDRYRRHLAALARDMAERFDPDADGLESRITLLHEVVIDRHGYSGDDQTYDDLQNANLLRVIDRRKGLPVALGILYLHAARSMGWDIVGLNFPGHFLVRLEVEGERAILDPFNGGQVRTVVDLRELIKATAGTAAELEPAYYQAVGNRDILLRLQNNLKLRHLSANDVAQALEVLDAMRLMAPEEPALWREIGLLEAHRGNLDEAIAALETFMRLGGSDHQLH-----QAAMLIQQLKNRLN 277          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1631.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3C0TT54_9PROT1.810e-12264.83Transglut_core2 domain-containing protein n=1 Tax=... [more]
A0A351T6J1_9PROT9.680e-8854.61Transglut_core2 domain-containing protein n=3 Tax=... [more]
A0A6N7F6L6_9PROT3.260e-7852.21Tetratricopeptide repeat protein n=1 Tax=Alphaprot... [more]
A0A7C7KMI0_9PROT3.050e-7250.74Tetratricopeptide repeat protein n=1 Tax=Kiloniell... [more]
A0A2E5KTN0_9PROT5.080e-7246.99Transglut_core2 domain-containing protein n=1 Tax=... [more]
A0A537S069_9PROT5.750e-7248.87Tetratricopeptide repeat protein n=3 Tax=unclassif... [more]
A0A3S0WWE0_9PROT9.850e-7246.84Tetratricopeptide repeat protein n=2 Tax=Azospiril... [more]
A0A418VW83_9PROT1.080e-7147.06Transglut_core2 domain-containing protein n=1 Tax=... [more]
A0A1X7PV25_AZOLI1.390e-7146.84Regulator of sirC expression, contains transglutam... [more]
A0A2U1WQJ2_9PROT1.970e-7147.08Transglut_core2 domain-containing protein n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1631contigP-wetherbeei_contig1631:2638..3510 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog414684.RC1_3038
PFAMsTPR_9,Transglut_core2
Model size873
Max annot lvl204441|Rhodospirillales
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.48e-68
EggNOG OGsCOG2912@1|root,COG2912@2|Bacteria,1MVJQ@1224|Proteobacteria,2U64D@28211|Alphaproteobacteria,2JRS0@204441|Rhodospirillales
DescriptionTransglutaminase-like superfamily
Cds size873
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186082.954848-CDS-P-wetherbeei_contig1631:2637..35101683186082.954848-CDS-P-wetherbeei_contig1631:2637..3510Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1631 2638..3510 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1631.4.1prot_P-wetherbeei_contig1631.4.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1631 2638..3510 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1631.4.1

>prot_P-wetherbeei_contig1631.4.1 ID=prot_P-wetherbeei_contig1631.4.1|Name=mRNA_P-wetherbeei_contig1631.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=291bp
MDKNTPPENPSVSDTPDGNPLWETLRAAGRASDDDLDVASVALALAALDC
PDRELAAYAAHLAEIGAAVASGCADAGHIDARADVLAQVISQQFGYAGDQ
ASYNDMQNANLMQVIDRRRGLPVALGLLYIIAARAQGWACAGLNFPGHFL
IRLELGSARRILDPFNGGVKMEIPQLRSLLKGMAGEGAELKPEYYQPVSN
RDVLLRLLNNIKGRAFQSNDFIRASGILHRMRMISPAAAHLGYEHGMVHA
RLGNVPEALSAMRACIDHALDPKLQKMAELALQQLRLKMN*
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mRNA from alignment at P-wetherbeei_contig1631:2638..3510+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1631.4.1 ID=mRNA_P-wetherbeei_contig1631.4.1|Name=mRNA_P-wetherbeei_contig1631.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=873bp|location=Sequence derived from alignment at P-wetherbeei_contig1631:2638..3510+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGATAAAAACACGCCCCCTGAAAATCCGTCCGTATCTGACACTCCTGA TGGCAATCCGCTCTGGGAAACGCTTCGAGCCGCAGGGCGGGCCAGCGACG ATGATCTGGATGTCGCCAGCGTTGCCCTGGCGCTTGCGGCGCTGGATTGC CCGGATCGCGAACTGGCGGCCTATGCCGCACATCTGGCTGAGATTGGCGC CGCTGTTGCCAGTGGATGCGCGGATGCTGGTCACATTGATGCACGCGCCG ATGTGCTGGCGCAGGTGATCAGCCAGCAATTTGGATATGCCGGCGACCAG GCAAGTTACAACGACATGCAGAACGCCAATCTAATGCAGGTGATCGACCG GCGCAGGGGCCTGCCGGTGGCGCTGGGCCTGCTATATATCATCGCCGCGC GCGCCCAGGGCTGGGCCTGTGCCGGGCTGAATTTTCCCGGGCATTTTCTG ATCCGGCTGGAACTGGGCAGCGCACGGCGCATACTTGATCCCTTCAATGG CGGCGTAAAAATGGAAATTCCGCAATTGCGCAGCCTGTTAAAAGGCATGG CGGGCGAGGGTGCGGAATTAAAGCCTGAATATTATCAGCCTGTCAGCAAT CGCGACGTGCTGCTGCGGCTGCTGAATAATATCAAGGGCCGCGCGTTTCA AAGCAATGACTTCATTCGCGCATCCGGTATTTTGCACCGTATGCGGATGA TTTCACCGGCTGCCGCGCATCTTGGGTATGAGCATGGCATGGTGCATGCC CGTCTTGGCAATGTGCCCGAAGCGCTGTCTGCGATGCGCGCCTGCATTGA CCATGCGCTGGATCCAAAATTGCAGAAAATGGCCGAACTTGCCCTGCAGC AATTACGCCTGAAGATGAATTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1631:2638..3510+

>mRNA_P-wetherbeei_contig1631.4.1 ID=mRNA_P-wetherbeei_contig1631.4.1|Name=mRNA_P-wetherbeei_contig1631.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=873bp|location=Sequence derived from alignment at P-wetherbeei_contig1631:2638..3510+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGATAAAAACACGCCCCCTGAAAATCCGTCCGTATCTGACACTCCTGA
TGGCAATCCGCTCTGGGAAACGCTTCGAGCCGCAGGGCGGGCCAGCGACG
ATGATCTGGATGTCGCCAGCGTTGCCCTGGCGCTTGCGGCGCTGGATTGC
CCGGATCGCGAACTGGCGGCCTATGCCGCACATCTGGCTGAGATTGGCGC
CGCTGTTGCCAGTGGATGCGCGGATGCTGGTCACATTGATGCACGCGCCG
ATGTGCTGGCGCAGGTGATCAGCCAGCAATTTGGATATGCCGGCGACCAG
GCAAGTTACAACGACATGCAGAACGCCAATCTAATGCAGGTGATCGACCG
GCGCAGGGGCCTGCCGGTGGCGCTGGGCCTGCTATATATCATCGCCGCGC
GCGCCCAGGGCTGGGCCTGTGCCGGGCTGAATTTTCCCGGGCATTTTCTG
ATCCGGCTGGAACTGGGCAGCGCACGGCGCATACTTGATCCCTTCAATGG
CGGCGTAAAAATGGAAATTCCGCAATTGCGCAGCCTGTTAAAAGGCATGG
CGGGCGAGGGTGCGGAATTAAAGCCTGAATATTATCAGCCTGTCAGCAAT
CGCGACGTGCTGCTGCGGCTGCTGAATAATATCAAGGGCCGCGCGTTTCA
AAGCAATGACTTCATTCGCGCATCCGGTATTTTGCACCGTATGCGGATGA
TTTCACCGGCTGCCGCGCATCTTGGGTATGAGCATGGCATGGTGCATGCC
CGTCTTGGCAATGTGCCCGAAGCGCTGTCTGCGATGCGCGCCTGCATTGA
CCATGCGCTGGATCCAAAATTGCAGAAAATGGCCGAACTTGCCCTGCAGC
AATTACGCCTGAAGATGAATTGA
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