mRNA_P-wetherbeei_contig16308.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig16308.1.1 vs. uniprot
Match: A0A7X8Y0D1_9BURK (Glutamate racemase n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A7X8Y0D1_9BURK) HSP 1 Score: 192 bits (488), Expect = 2.440e-58 Identity = 101/166 (60.84%), Postives = 119/166 (71.69%), Query Frame = 1
Query: 22 MALGRIGVFDSGVGGLTIAGRLMEEAPHLGIHYFGDTAHVPYGGRPPEEVAMLVEQIVEYLVESGCSAVVMACNTSNAVALDRVKSWCPVPVVGIIEPAARAAMAATRNGRIGVIANPITASSGAYERACAPTLQSMYGPSRNVSVYPVGCPKLVPLIEQGLVHSP 519
M G IG+FDSGVGGLT+A R+ +E P YFGDTAHVPYG R EEV LV I +LV SG +VMACNTS+A+ALD V++W PVPV+GIIE A+RAA+ ATRNG +GVIANP+TA SGAYE ACA + V V PVGCP+LVPL+E G V SP
Sbjct: 1 MRPGLIGIFDSGVGGLTVADRVRQELPGAPFLYFGDTAHVPYGNRSAEEVRHLVSAIARHLVASGAQVLVMACNTSSALALDLVRAWSPVPVIGIIEAASRAAVQATRNGVVGVIANPLTAGSGAYEEACARASSEAGERAGGVRVLPVGCPRLVPLVEAGEVRSP 166
BLAST of mRNA_P-wetherbeei_contig16308.1.1 vs. uniprot
Match: A0A355TRC3_9BACT (Glutamate racemase n=1 Tax=bacterium UBP9_UBA11836 TaxID=2060920 RepID=A0A355TRC3_9BACT) HSP 1 Score: 181 bits (459), Expect = 6.000e-54 Identity = 94/165 (56.97%), Postives = 120/165 (72.73%), Query Frame = 1
Query: 37 IGVFDSGVGGLTIAGRLMEEAPHLGIHYFGDTAHVPYGGRPPEEVAMLVEQIVEYLVESGCSAVVMACNTSNAVALDRVKSWCPVPVVGIIEPAARAAMAATRNGRIGVIANPITASSGAYERACAPT--LQSMYGPS--RNVSVYPVGCPKLVPLIEQGLVHSP 519
IGVFDSGVGGLT+A ++ E P + +FGDT HVPYG R EV L++ I +L+ SG +VMACNTS+A+A D V +W P P++GII+ AA+AA+ ATRNGRIG++ANP+TA+SGAYE+ACA S+ G + V V PVGCPKLVPLIE+GLV P
Sbjct: 7 IGVFDSGVGGLTVAEQIDRELPGVPFIFFGDTQHVPYGNRSVSEVVSLIDAICHHLISSGAEVLVMACNTSSALAFDHVAAWSPAPIIGIIDEAAKAAVRATRNGRIGLMANPLTAASGAYEKACAQAHASASLKGETVASTVKVTPVGCPKLVPLIEKGLVSGP 171
BLAST of mRNA_P-wetherbeei_contig16308.1.1 vs. uniprot
Match: A0A101EC24_9THEO (Glutamate racemase n=2 Tax=Clostridia TaxID=186801 RepID=A0A101EC24_9THEO) HSP 1 Score: 152 bits (384), Expect = 9.390e-43 Identity = 82/161 (50.93%), Postives = 109/161 (67.70%), Query Frame = 1
Query: 37 IGVFDSGVGGLTIAGRLMEEAPHLGIHYFGDTAHVPYGGRPPEEVAMLVEQIVEYLVESGCSAVVMACNTSNAVALDRVKSWCPVPVVGIIEPAARAAMAATRNGRIGVIANPITASSGAYERACAPTLQSMYGPSRNVSVYPVGCPKLVPLIEQGLVHSP 519
+GVFDSGVGGLTIA ++ + P I Y+GDTAHVPYG + +E+ + IV YLVE G A+V ACNT++AVAL+ ++S VP++G+IEP R A+A TRNGRIGV+A T +SG + R LQS+ + VYP CP+LVPL+E G+V P
Sbjct: 7 VGVFDSGVGGLTIAREIVRQLPAETILYYGDTAHVPYGSKRVDELIRYADAIVAYLVEQGVKAIVDACNTTSAVALNYLQSKYSVPIIGVIEPGVRDALAVTRNGRIGVLATEATIASGLHARL----LQSL---EPRLKVYPQACPRLVPLVEAGIVDGP 160
BLAST of mRNA_P-wetherbeei_contig16308.1.1 vs. uniprot
Match: D7CIS5_SYNLT (Glutamate racemase n=1 Tax=Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) TaxID=643648 RepID=D7CIS5_SYNLT) HSP 1 Score: 152 bits (383), Expect = 1.470e-42 Identity = 76/160 (47.50%), Postives = 106/160 (66.25%), Query Frame = 1
Query: 37 IGVFDSGVGGLTIAGRLMEEAPHLGIHYFGDTAHVPYGGRPPEEVAMLVEQIVEYLVESGCSAVVMACNTSNAVALDRVKSWCPVPVVGIIEPAARAAMAATRNGRIGVIANPITASSGAYERACAPTLQSMYGPSRNVSVYPVGCPKLVPLIEQGLVHS 516
+GVFDSGVGGLT+ +++ P I Y GDTA+VPYGG+PP+E+ L + I+++L+ G AVV ACNTS++V++ ++ CPVPV+ +I P A A A TRNGR+GVIA T +GAY R + S +SVY V CP+ VPL+EQG++
Sbjct: 7 VGVFDSGVGGLTVVKEIIKRLPCENIIYIGDTANVPYGGKPPQELIRLGKNIIDFLINQGAKAVVAACNTSSSVSIPILRDMCPVPVIDVIVPGAANAAAVTRNGRVGVIATEATVKTGAYTR-------HIKALSPGISVYEVACPRFVPLVEQGVLEG 159
BLAST of mRNA_P-wetherbeei_contig16308.1.1 vs. uniprot
Match: A0A829ZQV6_9THEO (Glutamate racemase n=1 Tax=Thermanaeromonas sp. C210 TaxID=2731925 RepID=A0A829ZQV6_9THEO) HSP 1 Score: 151 bits (382), Expect = 1.870e-42 Identity = 80/161 (49.69%), Postives = 107/161 (66.46%), Query Frame = 1
Query: 37 IGVFDSGVGGLTIAGRLMEEAPHLGIHYFGDTAHVPYGGRPPEEVAMLVEQIVEYLVESGCSAVVMACNTSNAVALDRVKSWCPVPVVGIIEPAARAAMAATRNGRIGVIANPITASSGAYERACAPTLQSMYGPSRNVSVYPVGCPKLVPLIEQGLVHSP 519
+GVFDSGVGGLT+ ++ + P I Y+GDTAHVPYG + EE+ + IV YLVE G A+V ACNT++A+ALD +K+ VP++G+IEP R A+A TR+GRIGV+A T +SG + R LQS+ + VYP CP+LVPL+E G V P
Sbjct: 7 VGVFDSGVGGLTVVREIVRQLPAETIIYYGDTAHVPYGSKKVEELIAYADAIVSYLVEQGVKAIVDACNTTSAIALDYLKNKYSVPIIGVIEPGVREALAVTRSGRIGVLATEATIASGIHARL----LQSL---EPRLKVYPQACPRLVPLVEAGRVEGP 160
BLAST of mRNA_P-wetherbeei_contig16308.1.1 vs. uniprot
Match: A0A7V6ZV27_9FIRM (Glutamate racemase n=1 Tax=Clostridia bacterium TaxID=2044939 RepID=A0A7V6ZV27_9FIRM) HSP 1 Score: 149 bits (376), Expect = 1.530e-41 Identity = 77/162 (47.53%), Postives = 104/162 (64.20%), Query Frame = 1
Query: 37 IGVFDSGVGGLTIAGRLMEEAPHLGIHYFGDTAHVPYGGRPPEEVAMLVEQIVEYLVESGCSAVVMACNTSNAVALDRVKSWCPVPVVGIIEPAARAAMAATRNGRIGVIANPITASSGAYERACAPTLQSMYGPSR-NVSVYPVGCPKLVPLIEQGLVHSP 519
+GVFDSGVGGLT+ ++ + PH + YFGDTAHVPYG R PEE+ +I EYLV GC +++ACNTS ++A + +K PVP++G+IEPA A++ T+N IGV+A T +S +Y Q+M R V VYP CP VPLIE+G+V P
Sbjct: 9 LGVFDSGVGGLTVVKEILRQLPHESVFYFGDTAHVPYGSRSPEELQGFAFKITEYLVAQGCKMIIIACNTSTSLAYELLKEKFPVPMIGVIEPAVDKALSMTQNNCIGVLATEATINSQSY--------QTMLRSKRPRVEVYPQACPAFVPLIEKGIVDGP 162
BLAST of mRNA_P-wetherbeei_contig16308.1.1 vs. uniprot
Match: UPI00168475C0 (glutamate racemase n=2 Tax=unclassified Microcoleus TaxID=2642155 RepID=UPI00168475C0) HSP 1 Score: 149 bits (377), Expect = 1.950e-41 Identity = 85/173 (49.13%), Postives = 112/173 (64.74%), Query Frame = 1
Query: 1 PSFLGGKMALGRIGVFDSGVGGLTIAGRLMEEAPHLGIHYFGDTAHVPYGGRPPEEVAMLVEQIVEYLVESGCSAVVMACNTSNAVALDRVKSWCPVPVVGIIEPAARAAMAATRNGRIGVIANPITASSGAYERACAPTLQSMYGPSRNVSVYPVGCPKLVPLIEQGLVHSP 519
PS G+ RIG+FDSGVGGLT+ L + PH I YFGDTA +PYG R E+ V +I+ ++V+ G V+MACNTS+A+AL+ V+S P+P++G+I P ARAA+ R RIGVIA P TA+S AY RA + M +R V+ VGCP+ VPLIEQG + P
Sbjct: 12 PSSFTGEPQRDRIGIFDSGVGGLTVLRELYRQLPHESILYFGDTARLPYGTRSQAEILQFVREILTWMVQQGVKMVIMACNTSSALALEAVRSEFPLPILGVILPGARAAVQQGR--RIGVIATPATAASNAYRRA----ILEMDAEAR---VWQVGCPEFVPLIEQGRIDEP 175
BLAST of mRNA_P-wetherbeei_contig16308.1.1 vs. uniprot
Match: A0A3A6MR21_9FIRM (Glutamate racemase n=1 Tax=Candidatus Desulforudis sp. TaxID=2093368 RepID=A0A3A6MR21_9FIRM) HSP 1 Score: 147 bits (370), Expect = 1.220e-40 Identity = 77/161 (47.83%), Postives = 111/161 (68.94%), Query Frame = 1
Query: 37 IGVFDSGVGGLTIAGRLMEEAPHLGIHYFGDTAHVPYGGRPPEEVAMLVEQIVEYLVESGCSAVVMACNTSNAVALDRVKSWCPVPVVGIIEPAARAAMAATRNGRIGVIANPITASSGAYERACAPTLQSMYGPSRNVSVYPVGCPKLVPLIEQGLVHSP 519
+G+FDSGVGGLT+AGR+ E+ P L I YFGDTAHVPYG R PEE+ + I+ +L G ++ ACNTS++++L+ +++ +P++G+I P A+AA+ ATR+GR+G+IA T SGAYERA ++S+ S VY V P+LVPL+E G + P
Sbjct: 6 VGLFDSGVGGLTVAGRVFEKLPGLPILYFGDTAHVPYGNRSPEELVRYADGIISFLTGQGARYIIFACNTSSSLSLEIMRTRHALPMMGLIVPGAKAAVDATRSGRVGIIATQGTVKSGAYERA----IRSL---SPGTVVYSVPAPRLVPLVEAGQMDGP 159
BLAST of mRNA_P-wetherbeei_contig16308.1.1 vs. uniprot
Match: A0A2T0AWA6_9THEO (Glutamate racemase n=1 Tax=Moorella humiferrea TaxID=676965 RepID=A0A2T0AWA6_9THEO) HSP 1 Score: 146 bits (368), Expect = 2.420e-40 Identity = 79/161 (49.07%), Postives = 104/161 (64.60%), Query Frame = 1
Query: 37 IGVFDSGVGGLTIAGRLMEEAPHLGIHYFGDTAHVPYGGRPPEEVAMLVEQIVEYLVESGCSAVVMACNTSNAVALDRVKSWCPVPVVGIIEPAARAAMAATRNGRIGVIANPITASSGAYERACAPTLQSMYGPSRNVSVYPVGCPKLVPLIEQGLVHSP 519
+GVFDSGVGGLT+A + + P I Y+GDTAHVPYG R EE+ + I +LVE G A+V ACNT++AVAL +K VP++G+IEP + A+ ATRNGRIGVIA T +S A+E+A + + +V V+ CPKLVPL+E G V P
Sbjct: 7 VGVFDSGVGGLTVALEISRQLPAETIVYYGDTAHVPYGSRTVEELIFFADTITRFLVEQGAKAIVDACNTTSAVALPYLKQKYDVPIIGVIEPGVKEALKATRNGRIGVIATEATIASRAHEKA-------VQAHAADVQVFGRACPKLVPLVEAGKVSGP 160
BLAST of mRNA_P-wetherbeei_contig16308.1.1 vs. uniprot
Match: UPI0019B2FB79 (Glutamate racemase n=1 Tax=Gemmatimonadaceae bacterium TaxID=2026741 RepID=UPI0019B2FB79) HSP 1 Score: 145 bits (367), Expect = 3.170e-40 Identity = 77/161 (47.83%), Postives = 102/161 (63.35%), Query Frame = 1
Query: 37 IGVFDSGVGGLTIAGRLMEEAPHLGIHYFGDTAHVPYGGRPPEEVAMLVEQIVEYLVESGCSAVVMACNTSNAVALDRVKSWCPVPVVGIIEPAARAAMAATRNGRIGVIANPITASSGAYERACAPTLQSMYGPSRNVSVYPVGCPKLVPLIEQGLVHSP 519
IGVFDSG+GGLT+ +M PH + Y GDTA VPYG + PE V QI +L+E A+V+ACNT+ A AL+ ++ CPVPV+G+++P ARAA+ ATRN RIGVI T +SGAY RA A + + +V+ CP VPL+E+G V P
Sbjct: 6 IGVFDSGIGGLTVVAAIMHALPHERVVYVGDTARVPYGPKSPETVVRYSRQIATWLLEQQVKAIVIACNTATAHALELLQRECPVPVIGVVQPGARAAVRATRNARIGVIGTSGTINSGAYHRAIASL-------APDATVFGAACPLFVPLVEEGWVDHP 159 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16308.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig16308.1.1 >prot_P-wetherbeei_contig16308.1.1 ID=prot_P-wetherbeei_contig16308.1.1|Name=mRNA_P-wetherbeei_contig16308.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=166bp MALGRIGVFDSGVGGLTIAGRLMEEAPHLGIHYFGDTAHVPYGGRPPEEVback to top mRNA from alignment at P-wetherbeei_contig16308:2..520- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig16308.1.1 ID=mRNA_P-wetherbeei_contig16308.1.1|Name=mRNA_P-wetherbeei_contig16308.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=519bp|location=Sequence derived from alignment at P-wetherbeei_contig16308:2..520- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig16308:2..520- >mRNA_P-wetherbeei_contig16308.1.1 ID=mRNA_P-wetherbeei_contig16308.1.1|Name=mRNA_P-wetherbeei_contig16308.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=498bp|location=Sequence derived from alignment at P-wetherbeei_contig16308:2..520- (Phaeothamnion wetherbeei SAG_119_79)back to top |