mRNA_P-wetherbeei_contig16305.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig16305.1.1
Unique NamemRNA_P-wetherbeei_contig16305.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig16305.1.1 vs. uniprot
Match: A0A521MCV7_9HYPH (Precorrin-3B C(17)-methyltransferase n=1 Tax=Reyranella sp. TaxID=1929291 RepID=A0A521MCV7_9HYPH)

HSP 1 Score: 427 bits (1098), Expect = 2.960e-148
Identity = 222/249 (89.16%), Postives = 234/249 (93.98%), Query Frame = 3
Query:  330 VTGSLVVVGTGPGKADLMTPATAAVLAKATDLVGYGPYLDRVPVTRADQCRHASDNRVELDRARHALSLAAAGRQVVVVSGGDPGVFAMASAIFEAVETGEPAWRALDIRVEPGVTAMLAAAAEVGAPLGGDFCAISLSDNLKAWATVERRLKAAAEADFVIALYNPASKARPHQLGLAFELLRALKAAETPVLFVRAAGTADAKVVTTTLEAADGALADMRTLVIVGASTTRQVGRWVYTPRSEPGAQ 1076
            +TGSL+VVGTGPGKADLMTPATAA L +ATDLVGYGPYLDR+PVTR DQCRHASDNRVELDRARHALSLAA+GRQVVVVSGGDPGVFAMASA+FEA+E GEP WR LDIRVEPGVTAMLAAAAEVGAPLGGDFCAISLSDNLKAW TVERRLKAAAE DFVIALYNPASKARPHQLG AF+LLRA+KAA TPVLFVRAAGT DAKVVTTTL AADGALADMRTLVIVGAS TRQ+GRW+YTPR EPG +
Sbjct:    1 MTGSLIVVGTGPGKADLMTPATAAALERATDLVGYGPYLDRIPVTRTDQCRHASDNRVELDRARHALSLAASGRQVVVVSGGDPGVFAMASAVFEAIEAGEPGWRTLDIRVEPGVTAMLAAAAEVGAPLGGDFCAISLSDNLKAWTTVERRLKAAAEGDFVIALYNPASKARPHQLGQAFDLLRAIKAAGTPVLFVRAAGTPDAKVVTTTLAAADGALADMRTLVIVGASATRQIGRWIYTPRGEPGTR 249          
BLAST of mRNA_P-wetherbeei_contig16305.1.1 vs. uniprot
Match: A0A521QTM5_9HYPH (Precorrin-3B C(17)-methyltransferase n=2 Tax=Reyranella TaxID=445219 RepID=A0A521QTM5_9HYPH)

HSP 1 Score: 405 bits (1042), Expect = 9.050e-140
Identity = 213/245 (86.94%), Postives = 226/245 (92.24%), Query Frame = 3
Query:  330 VTGSLVVVGTGPGKADLMTPATAAVLAKATDLVGYGPYLDRVPVTRADQCRHASDNRVELDRARHALSLAAAGRQVVVVSGGDPGVFAMASAIFEAVETGEPAWRALDIRVEPGVTAMLAAAAEVGAPLGGDFCAISLSDNLKAWATVERRLKAAAEADFVIALYNPASKARPHQLGLAFELLRALKAAETPVLFVRAAGTADAKVVTTTLEAADGALADMRTLVIVGASTTRQVGRWVYTPRSE 1064
            +TGSLVVVGTGPGKADLMTPAT A L +ATDLVGYGPYLDRVP  RADQCRHASDNRVELDRARHAL LAAAGRQVVVVSGGDPGVFAMA+A+FEAVE G+PAWR LDI+VEPGVTAMLAAAAEVGAPLGGDFCAISLSDNLK W T+ERRL AAAE DFVIALYNPASKARPHQLG AF+LLR LK A TPVLFVRAAGTA+AKVV TTL AAD ++ADMRTLVI+GASTTRQVGRW+YTPRSE
Sbjct:    1 MTGSLVVVGTGPGKADLMTPATRAALNRATDLVGYGPYLDRVPAIRADQCRHASDNRVELDRARHALELAAAGRQVVVVSGGDPGVFAMAAAVFEAVEAGDPAWRTLDIKVEPGVTAMLAAAAEVGAPLGGDFCAISLSDNLKGWTTIERRLAAAAEGDFVIALYNPASKARPHQLGQAFDLLRKLKDAATPVLFVRAAGTAEAKVVATTLGAADASVADMRTLVIIGASTTRQVGRWIYTPRSE 245          
BLAST of mRNA_P-wetherbeei_contig16305.1.1 vs. uniprot
Match: A0A6A7M4G7_9PROT (Precorrin-3B C(17)-methyltransferase n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A6A7M4G7_9PROT)

HSP 1 Score: 400 bits (1027), Expect = 2.060e-137
Identity = 215/244 (88.11%), Postives = 229/244 (93.85%), Query Frame = 3
Query:  333 TGSLVVVGTGPGKADLMTPATAAVLAKATDLVGYGPYLDRVPVTRADQCRHASDNRVELDRARHALSLAAAGRQVVVVSGGDPGVFAMASAIFEAVETGEPAWRALDIRVEPGVTAMLAAAAEVGAPLGGDFCAISLSDNLKAWATVERRLKAAAEADFVIALYNPASKARPHQLGLAFELLRALKAAETPVLFVRAAGTADAKVVTTTLEAADGALADMRTLVIVGASTTRQVGRWVYTPRSE 1064
            +GSLVVVGTGPGKA+L+TPAT A LA+ATDLVGYGPYLDRVP  R+ QCRHASDNRVELDRARHALSLAAAGRQVVVVSGGDPGVFAMA+A+FEAVE GEP WR LDIRVEPGVTAMLAAAAEVGAPLGGDFCAISLSDNLKAW+TVERRLKAAAE DFVIALYNPASKARP QLG AF+LLR LK+A+TPVLFVRAAGTADA+V+TTTL AAD + ADMRTLVIVGASTTRQVGRWVYTPRSE
Sbjct:    6 SGSLVVVGTGPGKAELVTPATEAALARATDLVGYGPYLDRVPA-RSGQCRHASDNRVELDRARHALSLAAAGRQVVVVSGGDPGVFAMAAAVFEAVEAGEPEWRDLDIRVEPGVTAMLAAAAEVGAPLGGDFCAISLSDNLKAWSTVERRLKAAAEGDFVIALYNPASKARPTQLGQAFDLLRTLKSADTPVLFVRAAGTADAQVITTTLGAADPSRADMRTLVIVGASTTRQVGRWVYTPRSE 248          
BLAST of mRNA_P-wetherbeei_contig16305.1.1 vs. uniprot
Match: A0A1T4NY38_9HYPH (Precorrin-3 methyltransferase n=1 Tax=Enhydrobacter aerosaccus TaxID=225324 RepID=A0A1T4NY38_9HYPH)

HSP 1 Score: 396 bits (1018), Expect = 4.030e-136
Identity = 207/248 (83.47%), Postives = 228/248 (91.94%), Query Frame = 3
Query:  330 VTGSLVVVGTGPGKADLMTPATAAVLAKATDLVGYGPYLDRVPVTRADQCRHASDNRVELDRARHALSLAAAGRQVVVVSGGDPGVFAMASAIFEAVETGEPAWRALDIRVEPGVTAMLAAAAEVGAPLGGDFCAISLSDNLKAWATVERRLKAAAEADFVIALYNPASKARPHQLGLAFELLRALKAAETPVLFVRAAGTADAKVVTTTLEAADGALADMRTLVIVGASTTRQVGRWVYTPRSEPGA 1073
            ++GSLVVVGTGPGKA+LMTPAT A +AKATDLVGYGPYLDR+P  +A QCRHASDNRVELDRARHALSLAAAGR VVVVSGGDPGVFAMA+A+FEAVE G+PAWR LDIRVEPGVTAMLAAAAEVGAPLGGDFCAISLSDNLK+W+T+ERRLKAAA  DFVIALYNPASKARP QL  AF LLR++K A TPVLFVRAAGT++AKVV+TTL  ADG++ADMRTLVI+GASTTRQVGRW+YTPR E GA
Sbjct:    1 MSGSLVVVGTGPGKAELMTPATQAAIAKATDLVGYGPYLDRIPAMKAGQCRHASDNRVELDRARHALSLAAAGRDVVVVSGGDPGVFAMAAAVFEAVEVGDPAWRTLDIRVEPGVTAMLAAAAEVGAPLGGDFCAISLSDNLKSWSTIERRLKAAAHGDFVIALYNPASKARPRQLAEAFVLLRSVKDAATPVLFVRAAGTSEAKVVSTTLGMADGSMADMRTLVIIGASTTRQVGRWIYTPRRERGA 248          
BLAST of mRNA_P-wetherbeei_contig16305.1.1 vs. uniprot
Match: UPI001E39C6F8 (precorrin-3B C(17)-methyltransferase n=2 Tax=Reyranella TaxID=445219 RepID=UPI001E39C6F8)

HSP 1 Score: 395 bits (1016), Expect = 8.120e-136
Identity = 209/245 (85.31%), Postives = 224/245 (91.43%), Query Frame = 3
Query:  330 VTGSLVVVGTGPGKADLMTPATAAVLAKATDLVGYGPYLDRVPVTRADQCRHASDNRVELDRARHALSLAAAGRQVVVVSGGDPGVFAMASAIFEAVETGEPAWRALDIRVEPGVTAMLAAAAEVGAPLGGDFCAISLSDNLKAWATVERRLKAAAEADFVIALYNPASKARPHQLGLAFELLRALKAAETPVLFVRAAGTADAKVVTTTLEAADGALADMRTLVIVGASTTRQVGRWVYTPRSE 1064
            ++GSL VVGTGPGKA+LMTPAT AVL +A+DLVGYGPYLDR+P TR DQ RHASDNRVELDRARHALSLAA GR VVVVSGGDPGVFAMASA+FEAVE G+PAWR LDIRVEPGVTAMLAAAAEVGAPLGGDFCAISLSDNLK+W+T+ERRLKAAA+ADFV+A YNPASKARPHQLG AFELLR +KA ETPVLFVRAAGT DAKV   TLE AD A+ADMRTLVIVGASTTR VGRWVYTPRSE
Sbjct:    1 MSGSLTVVGTGPGKAELMTPATRAVLDRASDLVGYGPYLDRIPATRPDQRRHASDNRVELDRARHALSLAATGRDVVVVSGGDPGVFAMASAVFEAVEGGDPAWRTLDIRVEPGVTAMLAAAAEVGAPLGGDFCAISLSDNLKSWSTIERRLKAAADADFVMAFYNPASKARPHQLGKAFELLRQVKAGETPVLFVRAAGTNDAKVTAATLETADPAVADMRTLVIVGASTTRTVGRWVYTPRSE 245          
BLAST of mRNA_P-wetherbeei_contig16305.1.1 vs. uniprot
Match: A0A521LM08_9HYPH (Precorrin-3B C(17)-methyltransferase n=1 Tax=Reyranella sp. TaxID=1929291 RepID=A0A521LM08_9HYPH)

HSP 1 Score: 393 bits (1009), Expect = 9.410e-135
Identity = 206/245 (84.08%), Postives = 225/245 (91.84%), Query Frame = 3
Query:  330 VTGSLVVVGTGPGKADLMTPATAAVLAKATDLVGYGPYLDRVPVTRADQCRHASDNRVELDRARHALSLAAAGRQVVVVSGGDPGVFAMASAIFEAVETGEPAWRALDIRVEPGVTAMLAAAAEVGAPLGGDFCAISLSDNLKAWATVERRLKAAAEADFVIALYNPASKARPHQLGLAFELLRALKAAETPVLFVRAAGTADAKVVTTTLEAADGALADMRTLVIVGASTTRQVGRWVYTPRSE 1064
            +TGSL VVGTGPG+ +LMTPAT AVL +ATDLVGYGPYLDR+P   A QCRHASDNRVELDRARHALSLAA G+QVVVVSGGDPGVFAMA+A+FEAVETG+PAW+ALDIRVEPGVTAMLAAAAEVGAPLGGDFCAISLSDNLK W+T+ERRLKAAAEADFVIALYNPASKARPHQLG AF+L+R LK A TPVLFVRAAGT DAKVVT +L  AD ++ADMRTLVI+GASTTR+VGRWVYTPR E
Sbjct:    1 MTGSLTVVGTGPGRPELMTPATRAVLDRATDLVGYGPYLDRIPAGGAGQCRHASDNRVELDRARHALSLAAEGKQVVVVSGGDPGVFAMAAAVFEAVETGDPAWQALDIRVEPGVTAMLAAAAEVGAPLGGDFCAISLSDNLKGWSTIERRLKAAAEADFVIALYNPASKARPHQLGQAFDLMRKLKDAATPVLFVRAAGTPDAKVVTASLGEADASVADMRTLVIIGASTTRRVGRWVYTPRRE 245          
BLAST of mRNA_P-wetherbeei_contig16305.1.1 vs. uniprot
Match: A0A537NFG0_9PROT (Precorrin-3B C(17)-methyltransferase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537NFG0_9PROT)

HSP 1 Score: 390 bits (1001), Expect = 1.440e-133
Identity = 208/250 (83.20%), Postives = 229/250 (91.60%), Query Frame = 3
Query:  330 VTGSLVVVGTGPGKADLMTPATAAVLAKATDLVGYGPYLDRVPVTRADQCRHASDNRVELDRARHALSLAAAGRQVVVVSGGDPGVFAMASAIFEAVETGEPAWRALDIRVEPGVTAMLAAAAEVGAPLGGDFCAISLSDNLKAWATVERRLKAAAEADFVIALYNPASKARPHQLGLAFELLRALKAAETPVLFVRAAGTADAKVVTTTLEAADGALADMRTLVIVGASTTRQVGRWVYTPRSEPGAQP 1079
            + GSLV+VGTGPGKA+LMTPAT A LA+ATDLVGYGPYLDRVP T A QCRHASDNR EL+RARHAL+LAAAGR+V VVSGGDPGVFAMA+A+FEAVE G+PAWRALDIRVEPGVTAMLAAAAEVGAPLGGDFCAISLSDNLK+WAT+ERRLKAAAEADFVIALYNPASKARPHQLG AF LLRA+KA ETPVL VRAAG+A+A+V+ TTL  AD A ADMRTL+IVGASTTR+VGRW+YTPR   GA+P
Sbjct:    1 MNGSLVIVGTGPGKAELMTPATQAALAEATDLVGYGPYLDRVPPT-AGQCRHASDNRAELERARHALALAAAGRKVAVVSGGDPGVFAMAAAVFEAVERGDPAWRALDIRVEPGVTAMLAAAAEVGAPLGGDFCAISLSDNLKSWATIERRLKAAAEADFVIALYNPASKARPHQLGEAFALLRAVKAGETPVLLVRAAGSAEARVIATTLAEADAAQADMRTLIIVGASTTRRVGRWIYTPR---GAKP 246          
BLAST of mRNA_P-wetherbeei_contig16305.1.1 vs. uniprot
Match: A0A259M9R8_9PROT (Precorrin-3B C(17)-methyltransferase n=1 Tax=Rhodospirillales bacterium 39-66-50 TaxID=1970570 RepID=A0A259M9R8_9PROT)

HSP 1 Score: 376 bits (966), Expect = 4.120e-128
Identity = 204/250 (81.60%), Postives = 223/250 (89.20%), Query Frame = 3
Query:  330 VTGSLVVVGTGPGKADLMTPATAAVLAKATDLVGYGPYLDRVPVTRADQCRHASDNRVELDRARHALSLAAAGRQVVVVSGGDPGVFAMASAIFEAVETGEPAWRALDIRVEPGVTAMLAAAAEVGAPLGGDFCAISLSDNLKAWATVERRLKAAAEADFVIALYNPASKARPHQLGLAFELLRALKAAETPVLFVRAAGTADAKVVTTTLEAADGALADMRTLVIVGASTTRQVGR-----WVYTPRSE 1064
            ++GSLVVVGTGPGKA+LMTPATAA +A+ATDLVGYGPYLDRVP+ RADQ RHASDN VEL+RARHALSLAAAG+QVVVVSGGDPGVFAMA+A+FEAVE G+PAWR LDIRVEPGVTAMLAAAAEVGAPLGGDFCAISLSDNL+AW T+ERRLKAAA+ADFVIALYNPASKARP+QL  AF+LLRA KA +TPVLFVRAAGTA+A   TT L  AD   ADMRTLVI+GASTTR V R     WVYTPRSE
Sbjct:    1 MSGSLVVVGTGPGKAELMTPATAAKIARATDLVGYGPYLDRVPLMRADQVRHASDNGVELERARHALSLAAAGKQVVVVSGGDPGVFAMAAAVFEAVEAGDPAWRDLDIRVEPGVTAMLAAAAEVGAPLGGDFCAISLSDNLRAWTTIERRLKAAADADFVIALYNPASKARPNQLRKAFDLLRAAKAPDTPVLFVRAAGTAEAATTTTDLAGADTGRADMRTLVIIGASTTRLVHRDGRAPWVYTPRSE 250          
BLAST of mRNA_P-wetherbeei_contig16305.1.1 vs. uniprot
Match: A0A521R9X9_9HYPH (Precorrin-3B C(17)-methyltransferase n=1 Tax=Reyranella sp. TaxID=1929291 RepID=A0A521R9X9_9HYPH)

HSP 1 Score: 353 bits (907), Expect = 5.140e-119
Identity = 193/248 (77.82%), Postives = 208/248 (83.87%), Query Frame = 3
Query:  336 GSLVVVGTGPGKADLMTPATAAVLAKATDLVGYGPYLDRVPVTRADQCRHASDNRVELDRARHALSLAAAGRQVVVVSGGDPGVFAMASAIFEAVETGEPAWRALDIRVEPGVTAMLAAAAEVGAPLGGDFCAISLSDNLKAWATVERRLKAAAEADFVIALYNPASKARPHQLGLAFELLRALKAAETPVLFVRAAGTADAKVVTTTLEAADGALADMRTLVIVGASTTRQVGRWVYTPRSEPGAQP 1079
            GSLV+VGTGPG  DLMTPATAA +A ATDLVGYGPYLDRVP  R DQ RHASDNRVELDRAR AL LAA GR V VVSGGDPGVFAMA+A+FEAVE G+P WR+LDIRVEPGVTAMLAAAA VGAPLGGDFCAISLSDNLK+W T+ERRL AAA+ DFVIALYNPAS+ARPHQLG A +LL   K A TPVLFVRAAGT    V+  TL+  D A ADMRTLVIVGAS TR+VGRW YTPR E GA+P
Sbjct:    5 GSLVIVGTGPGDPDLMTPATAAAIAGATDLVGYGPYLDRVPA-RGDQARHASDNRVELDRARLALDLAAKGRHVAVVSGGDPGVFAMAAAVFEAVEEGDPQWRSLDIRVEPGVTAMLAAAAAVGAPLGGDFCAISLSDNLKSWTTIERRLAAAADGDFVIALYNPASRARPHQLGDALDLLHTRKPATTPVLFVRAAGTPGCTVIEATLDTVDPAKADMRTLVIVGASATRRVGRWFYTPRRE-GARP 250          
BLAST of mRNA_P-wetherbeei_contig16305.1.1 vs. uniprot
Match: A0A163Z1H0_9BRAD (Precorrin-3B C(17)-methyltransferase n=1 Tax=Tardiphaga robiniae TaxID=943830 RepID=A0A163Z1H0_9BRAD)

HSP 1 Score: 340 bits (873), Expect = 5.430e-114
Identity = 177/250 (70.80%), Postives = 207/250 (82.80%), Query Frame = 3
Query:  330 VTGSLVVVGTGPGKADLMTPATAAVLAKATDLVGYGPYLDRVPVTRADQCRHASDNRVELDRARHALSLAAAGRQVVVVSGGDPGVFAMASAIFEAVETGEPAWRALDIRVEPGVTAMLAAAAEVGAPLGGDFCAISLSDNLKAWATVERRLKAAAEADFVIALYNPASKARPHQLGLAFELLRALKAAETPVLFVRAAGTADAKVVTTTLEAADGALADMRTLVIVGASTTRQVGR-----WVYTPRSE 1064
            ++GS+ +VG GPG  DL+TPA +  L  ATDLVGYGPY+DR+P T   QCRHAS NRVE+DRA+HAL+LAA GR+V VVSGGDPGVFAMA+A+FEA+E G PAWR LDIRVEPG+TAMLAAAAEVGAPLG DFCAISLSDNLK+W T+ERRL+AAAE DFVI+LYNPAS+ARPHQLG AFELLR +K+ ET VLFVR AGT +A V+ +TL   D ALADMRTLVI+GA  TR + R     W+YTPR+E
Sbjct:    1 MSGSVFIVGLGPGSIDLLTPAASRALQAATDLVGYGPYIDRIPETLFSQCRHASGNRVEIDRAQHALTLAAEGRKVAVVSGGDPGVFAMAAAVFEAIEAGNPAWRDLDIRVEPGITAMLAAAAEVGAPLGADFCAISLSDNLKSWDTIERRLRAAAEGDFVISLYNPASRARPHQLGQAFELLRTIKSPETVVLFVRKAGTPEAGVIVSTLAEVDSALADMRTLVIIGAEATRLIPRTGLRPWIYTPRAE 250          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16305.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A521MCV7_9HYPH2.960e-14889.16Precorrin-3B C(17)-methyltransferase n=1 Tax=Reyra... [more]
A0A521QTM5_9HYPH9.050e-14086.94Precorrin-3B C(17)-methyltransferase n=2 Tax=Reyra... [more]
A0A6A7M4G7_9PROT2.060e-13788.11Precorrin-3B C(17)-methyltransferase n=3 Tax=Alpha... [more]
A0A1T4NY38_9HYPH4.030e-13683.47Precorrin-3 methyltransferase n=1 Tax=Enhydrobacte... [more]
UPI001E39C6F88.120e-13685.31precorrin-3B C(17)-methyltransferase n=2 Tax=Reyra... [more]
A0A521LM08_9HYPH9.410e-13584.08Precorrin-3B C(17)-methyltransferase n=1 Tax=Reyra... [more]
A0A537NFG0_9PROT1.440e-13383.20Precorrin-3B C(17)-methyltransferase n=1 Tax=Alpha... [more]
A0A259M9R8_9PROT4.120e-12881.60Precorrin-3B C(17)-methyltransferase n=1 Tax=Rhodo... [more]
A0A521R9X9_9HYPH5.140e-11977.82Precorrin-3B C(17)-methyltransferase n=1 Tax=Reyra... [more]
A0A163Z1H0_9BRAD5.430e-11470.80Precorrin-3B C(17)-methyltransferase n=1 Tax=Tardi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16305contigP-wetherbeei_contig16305:2..1083 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1205680.CAKO01000038_gene1516
Preferred namecobJ
PFAMsCbiG_C,CbiG_N,TP_methylase
Model size1082
Max annot lvl204441|Rhodospirillales
KEGG rclassRC00003,RC01293,RC01545,RC02097,RC03471
KEGG koko:K05934,ko:K13541
KEGG ReactionR05180,R05809,R07772
KEGG Pathwayko00860,ko01100,map00860,map01100
Hectar predicted targeting categoryother localisation
Exons1
Evalue5.8e-129
EggNOG OGsCOG1010@1|root,COG1010@2|Bacteria,1MU79@1224|Proteobacteria,2TQJQ@28211|Alphaproteobacteria,2JQ9W@204441|Rhodospirillales
EC2.1.1.131,3.7.1.12
DescriptionPrecorrin-3B
Cds size702
COG categoryH
BRITEko00000,ko00001,ko01000
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186082.7299185-UTR-P-wetherbeei_contig16305:1..3811683186082.7299185-UTR-P-wetherbeei_contig16305:1..381Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig16305 2..381 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186082.7477694-CDS-P-wetherbeei_contig16305:381..10831683186082.7477694-CDS-P-wetherbeei_contig16305:381..1083Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16305 382..1083 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16305.1.1prot_P-wetherbeei_contig16305.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig16305 382..1083 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig16305.1.1

>prot_P-wetherbeei_contig16305.1.1 ID=prot_P-wetherbeei_contig16305.1.1|Name=mRNA_P-wetherbeei_contig16305.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=234bp
MTPATAAVLAKATDLVGYGPYLDRVPVTRADQCRHASDNRVELDRARHAL
SLAAAGRQVVVVSGGDPGVFAMASAIFEAVETGEPAWRALDIRVEPGVTA
MLAAAAEVGAPLGGDFCAISLSDNLKAWATVERRLKAAAEADFVIALYNP
ASKARPHQLGLAFELLRALKAAETPVLFVRAAGTADAKVVTTTLEAADGA
LADMRTLVIVGASTTRQVGRWVYTPRSEPGAQP*
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mRNA from alignment at P-wetherbeei_contig16305:2..1083+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig16305.1.1 ID=mRNA_P-wetherbeei_contig16305.1.1|Name=mRNA_P-wetherbeei_contig16305.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1082bp|location=Sequence derived from alignment at P-wetherbeei_contig16305:2..1083+ (Phaeothamnion wetherbeei SAG_119_79)
CCCGGTGTGACCGGCATGTCGGGCTGCTGGACGCGGGCCAACGTGCCGAT CACCTGGGGCGACGACACGCTTTCCGTGCTGCCGGGAACGCTCGAGGAGC AGCGGCTCGTCGACCATCTGCGCCAGACCGATGCGGCGGTGATCATGAAG GTCGGCCGCAACCTCGGCAAAGTGCGTCGCGCCGTCGAGGCGGCGGGCCT GCTGTCGCGCGCCGTCTATGTCGAACGCGGCACGATGGCGAATGAGCGGG TCCAGCCGCTCGCCGAGTGTCGTGACGCGACGGGCGCTTATTTTGCGATG GTGCTGATCCCGGGCCAGGGGAGGCGGCTGTGACCGGCTCTCTCGTCGTC GTCGGCACGGGCCCCGGCAAGGCCGATCTGATGACTCCGGCAACGGCAGC GGTGCTCGCGAAGGCGACGGACCTCGTGGGCTACGGCCCTTATCTCGATC GCGTGCCGGTAACGCGCGCCGATCAATGTCGACACGCCTCCGATAATCGT GTCGAACTGGACCGTGCCCGGCACGCGCTGTCGCTGGCGGCCGCGGGCCG GCAGGTCGTCGTCGTATCGGGCGGCGATCCTGGCGTGTTCGCCATGGCCT CGGCCATCTTCGAGGCGGTCGAAACCGGCGAGCCTGCGTGGCGCGCGCTC GACATCCGCGTCGAGCCCGGCGTCACCGCGATGCTGGCCGCGGCGGCCGA AGTCGGCGCACCACTCGGTGGCGATTTCTGCGCGATCTCGCTGTCCGACA ATCTGAAGGCATGGGCGACGGTGGAACGGCGGTTGAAGGCGGCAGCCGAG GCCGACTTCGTGATTGCCCTCTACAATCCGGCGTCGAAGGCCCGTCCACA CCAGCTGGGTCTCGCGTTCGAACTCCTGCGCGCGCTCAAGGCTGCCGAAA CGCCGGTATTGTTCGTGCGCGCGGCCGGCACGGCGGACGCGAAAGTCGTG ACGACGACGCTTGAGGCGGCCGACGGCGCGCTGGCCGACATGCGCACCCT GGTGATCGTGGGCGCCAGCACCACGCGGCAGGTCGGCCGCTGGGTCTATA CGCCGCGCAGCGAGCCGGGAGCGCAGCCGTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig16305:2..1083+

>mRNA_P-wetherbeei_contig16305.1.1 ID=mRNA_P-wetherbeei_contig16305.1.1|Name=mRNA_P-wetherbeei_contig16305.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=702bp|location=Sequence derived from alignment at P-wetherbeei_contig16305:2..1083+ (Phaeothamnion wetherbeei SAG_119_79)
ATGACTCCGGCAACGGCAGCGGTGCTCGCGAAGGCGACGGACCTCGTGGG
CTACGGCCCTTATCTCGATCGCGTGCCGGTAACGCGCGCCGATCAATGTC
GACACGCCTCCGATAATCGTGTCGAACTGGACCGTGCCCGGCACGCGCTG
TCGCTGGCGGCCGCGGGCCGGCAGGTCGTCGTCGTATCGGGCGGCGATCC
TGGCGTGTTCGCCATGGCCTCGGCCATCTTCGAGGCGGTCGAAACCGGCG
AGCCTGCGTGGCGCGCGCTCGACATCCGCGTCGAGCCCGGCGTCACCGCG
ATGCTGGCCGCGGCGGCCGAAGTCGGCGCACCACTCGGTGGCGATTTCTG
CGCGATCTCGCTGTCCGACAATCTGAAGGCATGGGCGACGGTGGAACGGC
GGTTGAAGGCGGCAGCCGAGGCCGACTTCGTGATTGCCCTCTACAATCCG
GCGTCGAAGGCCCGTCCACACCAGCTGGGTCTCGCGTTCGAACTCCTGCG
CGCGCTCAAGGCTGCCGAAACGCCGGTATTGTTCGTGCGCGCGGCCGGCA
CGGCGGACGCGAAAGTCGTGACGACGACGCTTGAGGCGGCCGACGGCGCG
CTGGCCGACATGCGCACCCTGGTGATCGTGGGCGCCAGCACCACGCGGCA
GGTCGGCCGCTGGGTCTATACGCCGCGCAGCGAGCCGGGAGCGCAGCCGT
GA
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